View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19953_high_24 (Length: 227)
Name: NF19953_high_24
Description: NF19953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19953_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8898586 - 8898796
Alignment:
| Q |
1 |
atctgtcaatgtaaaagttttattacaccatatgcaatgcaaatgttattgatttctctgaagtaatgatcttaggagatgaaacaattgtaattttaaa |
100 |
Q |
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| T |
8898586 |
atctgtcaatgtaaaagttttattacaccatatgcaatgcaaatgtaattgatttctctgaagtaatgatcttaggagatgaaacaattgtaattttaaa |
8898685 |
T |
|
| Q |
101 |
aagttattaattaattttaagtttttaacaaataattctaacccaagaagaaaatgagtgaaatttcaatacctcctgtttcatcattatgcttagttga |
200 |
Q |
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| T |
8898686 |
aagttattaattaattttaagtttttaac-aataattctaaccaaagaagaaaatgagtgaaatttcaatacctcctgtttcatcattttgcttagttga |
8898784 |
T |
|
| Q |
201 |
tcctctttcaat |
212 |
Q |
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|||||||||||| |
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| T |
8898785 |
tcctctttcaat |
8898796 |
T |
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