View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19953_high_27 (Length: 202)
Name: NF19953_high_27
Description: NF19953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19953_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 40737356 - 40737524
Alignment:
| Q |
20 |
agacagtcattcaaaagtttatgctcatggacactcaattcgttacaaaatacaatagagagaacctctcnnnnnnnttcagtatagaaacactttataa |
119 |
Q |
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| T |
40737356 |
agacagtcattcaaaagtttatgctcatggacactaaatttcttacaaaattcaatagagagaacctctcaaaaaaattcaatatagaaacattttataa |
40737455 |
T |
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| Q |
120 |
cctcgtggtcatcgataattgattatatagacaacatagattgaccacgtaccaagccaagagaataat |
188 |
Q |
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| T |
40737456 |
cctcgtggtcatcgataattgattatatagacaacatagattgaccacgtaccaagccaagagaataat |
40737524 |
T |
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