View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19953_high_8 (Length: 442)

Name: NF19953_high_8
Description: NF19953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19953_high_8
NF19953_high_8
[»] chr6 (34 HSPs)
chr6 (189-422)||(10104173-10104397)
chr6 (12-168)||(20242282-20242440)
chr6 (12-168)||(22136266-22136424)
chr6 (16-174)||(28051268-28051426)
chr6 (20-150)||(33718974-33719104)
chr6 (7-174)||(14482962-14483119)
chr6 (14-168)||(34132490-34132644)
chr6 (87-176)||(2402172-2402261)
chr6 (86-168)||(20192290-20192372)
chr6 (86-168)||(22143619-22143701)
chr6 (16-145)||(6205394-6205523)
chr6 (48-144)||(14114979-14115075)
chr6 (20-63)||(18744219-18744262)
chr6 (26-144)||(27640100-27640218)
chr6 (26-143)||(801086-801203)
chr6 (16-145)||(11692361-11692490)
chr6 (47-147)||(32027796-32027896)
chr6 (47-147)||(32037855-32037955)
chr6 (16-118)||(3765918-3766020)
chr6 (55-144)||(29066502-29066591)
chr6 (55-144)||(29075515-29075604)
chr6 (95-143)||(18744157-18744205)
chr6 (16-144)||(34803067-34803195)
chr6 (16-118)||(13402443-13402545)
chr6 (26-144)||(22305716-22305834)
chr6 (26-144)||(29108060-29108178)
chr6 (7-55)||(17465538-17465586)
chr6 (42-118)||(35060165-35060241)
chr6 (106-144)||(17465494-17465532)
chr6 (55-144)||(29110486-29110576)
chr6 (42-118)||(19242733-19242809)
chr6 (69-117)||(20244130-20244178)
chr6 (78-118)||(21865089-21865129)
chr6 (69-117)||(22138114-22138162)
[»] chr2 (40 HSPs)
chr2 (16-174)||(31992083-31992241)
chr2 (16-176)||(18878414-18878574)
chr2 (19-174)||(15891794-15891949)
chr2 (16-150)||(27650598-27650732)
chr2 (7-144)||(26617653-26617790)
chr2 (7-168)||(11718645-11718807)
chr2 (7-168)||(11679242-11679404)
chr2 (20-170)||(18036310-18036460)
chr2 (16-145)||(17424699-17424828)
chr2 (47-144)||(20148059-20148156)
chr2 (16-144)||(29906492-29906620)
chr2 (17-144)||(42241267-42241394)
chr2 (26-144)||(22493191-22493309)
chr2 (16-145)||(3937231-3937360)
chr2 (42-143)||(12968471-12968572)
chr2 (47-144)||(27130677-27130774)
chr2 (16-144)||(35491545-35491673)
chr2 (26-144)||(10364805-10364923)
chr2 (42-144)||(32734583-32734685)
chr2 (16-145)||(40678782-40678911)
chr2 (16-145)||(43982766-43982895)
chr2 (42-142)||(5306652-5306752)
chr2 (16-144)||(39800010-39800138)
chr2 (26-144)||(19471802-19471920)
chr2 (42-144)||(42119948-42120050)
chr2 (16-145)||(16253386-16253515)
chr2 (48-144)||(5420411-5420507)
chr2 (16-144)||(34638876-34639003)
chr2 (16-144)||(37312663-37312791)
chr2 (16-143)||(16581732-16581859)
chr2 (16-118)||(17796298-17796400)
chr2 (26-144)||(39393811-39393929)
chr2 (47-144)||(3941678-3941775)
chr2 (47-144)||(10360367-10360464)
chr2 (16-144)||(29067640-29067767)
chr2 (50-140)||(34521856-34521945)
chr2 (55-144)||(6901915-6902004)
chr2 (47-144)||(6976779-6976876)
chr2 (41-118)||(20529945-20530022)
chr2 (16-144)||(31770273-31770401)
[»] chr7 (38 HSPs)
chr7 (18-174)||(18146869-18147025)
chr7 (7-168)||(3380830-3380990)
chr7 (20-168)||(28066158-28066306)
chr7 (7-150)||(149978-150121)
chr7 (7-168)||(12082821-12082982)
chr7 (7-164)||(11824583-11824740)
chr7 (7-150)||(27318001-27318144)
chr7 (26-144)||(26603376-26603494)
chr7 (30-142)||(8726391-8726503)
chr7 (16-144)||(10522976-10523104)
chr7 (16-144)||(40588457-40588585)
chr7 (47-145)||(17183151-17183249)
chr7 (16-145)||(20564667-20564796)
chr7 (16-144)||(48220913-48221041)
chr7 (17-143)||(20378875-20379001)
chr7 (55-144)||(21187470-21187559)
chr7 (16-133)||(30360425-30360542)
chr7 (49-145)||(1642757-1642853)
chr7 (16-144)||(28979193-28979321)
chr7 (30-144)||(17839245-17839359)
chr7 (50-144)||(42682898-42682992)
chr7 (47-144)||(42735202-42735299)
chr7 (47-144)||(48315351-48315448)
chr7 (62-118)||(26926458-26926514)
chr7 (49-145)||(36393994-36394090)
chr7 (16-144)||(46862365-46862493)
chr7 (16-144)||(48270556-48270684)
chr7 (78-141)||(3924782-3924845)
chr7 (47-118)||(15338102-15338173)
chr7 (41-118)||(7062164-7062241)
chr7 (47-144)||(45363414-45363511)
chr7 (16-140)||(18237472-18237596)
chr7 (16-144)||(43351270-43351398)
chr7 (49-144)||(13916775-13916869)
chr7 (16-86)||(47268819-47268889)
chr7 (78-118)||(12309799-12309839)
chr7 (47-118)||(21650462-21650534)
chr7 (50-118)||(34140807-34140875)
[»] chr5 (41 HSPs)
chr5 (19-173)||(25360738-25360892)
chr5 (7-150)||(13131252-13131395)
chr5 (18-168)||(18920632-18920782)
chr5 (17-174)||(36312098-36312255)
chr5 (16-150)||(15798258-15798392)
chr5 (21-136)||(12067774-12067889)
chr5 (7-150)||(17195535-17195678)
chr5 (18-173)||(19747966-19748121)
chr5 (16-147)||(2599124-2599255)
chr5 (15-143)||(23228852-23228969)
chr5 (47-144)||(1971301-1971398)
chr5 (16-144)||(19400268-19400396)
chr5 (26-144)||(12742630-12742748)
chr5 (26-144)||(12805448-12805566)
chr5 (42-144)||(40009459-40009561)
chr5 (16-144)||(1400476-1400604)
chr5 (16-144)||(8576315-8576443)
chr5 (16-144)||(11346614-11346742)
chr5 (16-144)||(28880896-28881024)
chr5 (47-144)||(541809-541906)
chr5 (16-145)||(19036847-19036976)
chr5 (16-144)||(3458741-3458869)
chr5 (16-144)||(11027682-11027810)
chr5 (16-144)||(38854063-38854191)
chr5 (16-138)||(6793566-6793688)
chr5 (47-144)||(18308196-18308293)
chr5 (47-124)||(33370590-33370667)
chr5 (16-144)||(7403-7531)
chr5 (16-144)||(4724248-4724376)
chr5 (16-144)||(8537859-8537987)
chr5 (47-123)||(17366930-17367006)
chr5 (16-144)||(30709503-30709631)
chr5 (16-118)||(27661577-27661679)
chr5 (47-144)||(7082228-7082325)
chr5 (16-144)||(3601246-3601374)
chr5 (62-118)||(21290558-21290614)
chr5 (16-140)||(35565177-35565301)
chr5 (47-143)||(35927612-35927708)
chr5 (41-140)||(37396635-37396731)
chr5 (42-142)||(7576283-7576382)
chr5 (42-118)||(16418297-16418373)
[»] chr4 (51 HSPs)
chr4 (16-166)||(23124685-23124835)
chr4 (7-150)||(17291850-17291993)
chr4 (16-147)||(13866169-13866300)
chr4 (16-140)||(4785599-4785723)
chr4 (42-139)||(12227669-12227766)
chr4 (43-144)||(18412528-18412629)
chr4 (20-132)||(20759329-20759435)
chr4 (20-132)||(20765720-20765826)
chr4 (16-144)||(13850655-13850783)
chr4 (16-145)||(242588-242717)
chr4 (16-145)||(6177487-6177616)
chr4 (47-144)||(17211203-17211300)
chr4 (47-144)||(25762535-25762632)
chr4 (16-145)||(41794734-41794863)
chr4 (16-145)||(56138816-56138945)
chr4 (16-144)||(3393210-3393338)
chr4 (16-144)||(21017350-21017478)
chr4 (16-144)||(44560353-44560481)
chr4 (16-144)||(49792109-49792237)
chr4 (16-143)||(21412699-21412826)
chr4 (47-144)||(20901841-20901938)
chr4 (47-144)||(22436848-22436945)
chr4 (47-144)||(28082175-28082272)
chr4 (16-145)||(32938074-32938203)
chr4 (47-144)||(51027940-51028037)
chr4 (16-144)||(1226066-1226193)
chr4 (16-144)||(11288201-11288329)
chr4 (17-123)||(10312179-10312285)
chr4 (16-118)||(42886169-42886271)
chr4 (47-144)||(20779042-20779139)
chr4 (47-144)||(40353946-40354043)
chr4 (47-144)||(43889672-43889769)
chr4 (47-144)||(47657528-47657625)
chr4 (47-144)||(51428365-51428462)
chr4 (16-144)||(26591858-26591986)
chr4 (16-144)||(31324080-31324208)
chr4 (16-144)||(37866312-37866440)
chr4 (21-85)||(42420948-42421012)
chr4 (47-118)||(45939462-45939533)
chr4 (49-123)||(957649-957723)
chr4 (26-144)||(31824802-31824920)
chr4 (16-90)||(33163771-33163845)
chr4 (16-118)||(49423957-49424059)
chr4 (45-118)||(24075039-24075112)
chr4 (47-144)||(34529969-34530066)
chr4 (16-145)||(49094651-49094780)
chr4 (16-144)||(9489585-9489713)
chr4 (16-144)||(36776692-36776820)
chr4 (16-118)||(1042657-1042759)
chr4 (26-144)||(2772925-2773043)
chr4 (47-145)||(14330866-14330964)
[»] chr1 (49 HSPs)
chr1 (18-150)||(14772707-14772838)
chr1 (7-148)||(48707086-48707227)
chr1 (16-168)||(31451900-31452051)
chr1 (22-173)||(15471430-15471581)
chr1 (7-125)||(19262568-19262688)
chr1 (47-144)||(5765143-5765240)
chr1 (16-144)||(18842345-18842473)
chr1 (47-144)||(29762393-29762490)
chr1 (16-144)||(36909467-36909595)
chr1 (16-144)||(38046606-38046734)
chr1 (16-144)||(47488209-47488337)
chr1 (50-144)||(16098104-16098198)
chr1 (47-145)||(24270534-24270632)
chr1 (26-143)||(41875057-41875174)
chr1 (16-145)||(50068430-50068559)
chr1 (16-144)||(13283612-13283739)
chr1 (16-144)||(19160223-19160351)
chr1 (16-143)||(17696952-17697079)
chr1 (26-144)||(17372643-17372761)
chr1 (50-144)||(27035490-27035584)
chr1 (50-144)||(29435913-29436007)
chr1 (50-144)||(35587101-35587195)
chr1 (47-144)||(41780630-41780727)
chr1 (47-144)||(44337491-44337588)
chr1 (47-144)||(44597638-44597735)
chr1 (47-144)||(51269739-51269836)
chr1 (47-118)||(4209188-4209259)
chr1 (26-144)||(13635469-13635587)
chr1 (26-144)||(14173930-14174048)
chr1 (26-144)||(35526349-35526467)
chr1 (16-118)||(37777998-37778100)
chr1 (49-143)||(42571949-42572043)
chr1 (29-123)||(45689040-45689134)
chr1 (95-140)||(22529708-22529753)
chr1 (16-133)||(46181735-46181852)
chr1 (56-145)||(49599045-49599134)
chr1 (16-144)||(6435678-6435806)
chr1 (50-114)||(13148231-13148295)
chr1 (42-142)||(26793236-26793336)
chr1 (16-144)||(35184876-35185004)
chr1 (76-144)||(35576305-35576373)
chr1 (50-144)||(12791445-12791539)
chr1 (50-144)||(23342581-23342675)
chr1 (47-117)||(27486889-27486959)
chr1 (47-145)||(30309997-30310095)
chr1 (26-144)||(49396620-49396738)
chr1 (47-140)||(39224373-39224466)
chr1 (47-143)||(39857079-39857175)
chr1 (16-144)||(48568576-48568704)
[»] scaffold0121 (1 HSPs)
scaffold0121 (18-168)||(5250-5400)
[»] chr3 (57 HSPs)
chr3 (7-152)||(17267464-17267609)
chr3 (16-144)||(49218907-49219035)
chr3 (16-144)||(49273319-49273447)
chr3 (47-144)||(8633530-8633627)
chr3 (47-144)||(44927414-44927511)
chr3 (16-145)||(46402923-46403052)
chr3 (16-145)||(49140224-49140353)
chr3 (16-145)||(54390362-54390491)
chr3 (42-142)||(4095743-4095843)
chr3 (47-143)||(27186899-27186995)
chr3 (16-144)||(51695777-51695905)
chr3 (16-118)||(42382971-42383073)
chr3 (47-144)||(10053442-10053539)
chr3 (16-145)||(42382191-42382320)
chr3 (26-143)||(53826868-53826985)
chr3 (16-144)||(13896041-13896169)
chr3 (16-144)||(14265328-14265456)
chr3 (17-113)||(20378089-20378185)
chr3 (16-144)||(36134928-36135056)
chr3 (16-124)||(44835678-44835786)
chr3 (16-144)||(46414505-46414633)
chr3 (16-144)||(47065607-47065735)
chr3 (16-144)||(49610409-49610537)
chr3 (16-144)||(51013449-51013577)
chr3 (26-144)||(39417119-39417237)
chr3 (26-144)||(43569840-43569958)
chr3 (47-144)||(2428438-2428535)
chr3 (16-133)||(4004269-4004386)
chr3 (47-144)||(11378915-11379012)
chr3 (47-144)||(14631396-14631493)
chr3 (16-145)||(34049647-34049776)
chr3 (47-144)||(34472247-34472344)
chr3 (16-144)||(3495200-3495328)
chr3 (41-141)||(29635077-29635177)
chr3 (16-144)||(51015197-51015325)
chr3 (47-145)||(7954154-7954252)
chr3 (50-144)||(30192492-30192586)
chr3 (47-124)||(33449330-33449407)
chr3 (47-144)||(34647438-34647535)
chr3 (16-144)||(24702442-24702570)
chr3 (16-144)||(34693461-34693588)
chr3 (16-144)||(41803823-41803950)
chr3 (47-143)||(42328288-42328384)
chr3 (16-144)||(46346751-46346874)
chr3 (17-144)||(2268665-2268792)
chr3 (75-141)||(17370776-17370843)
chr3 (16-143)||(19453401-19453528)
chr3 (57-144)||(25576762-25576849)
chr3 (26-144)||(2647047-2647165)
chr3 (26-144)||(48087723-48087841)
chr3 (26-88)||(55207102-55207164)
chr3 (47-144)||(52569579-52569676)
chr3 (42-115)||(55390976-55391049)
chr3 (42-142)||(29788424-29788524)
chr3 (47-91)||(41577879-41577923)
chr3 (76-144)||(43477037-43477105)
chr3 (16-144)||(47760062-47760190)
[»] chr8 (29 HSPs)
chr8 (21-176)||(12504862-12505017)
chr8 (16-144)||(31171986-31172114)
chr8 (47-142)||(22843495-22843590)
chr8 (16-144)||(28706312-28706440)
chr8 (47-144)||(34614900-34614997)
chr8 (16-144)||(24861259-24861387)
chr8 (26-144)||(16575618-16575736)
chr8 (42-144)||(43638847-43638948)
chr8 (16-145)||(485427-485556)
chr8 (50-147)||(12785368-12785465)
chr8 (47-144)||(19242332-19242429)
chr8 (47-144)||(19315516-19315613)
chr8 (16-147)||(2416831-2416962)
chr8 (47-118)||(41363603-41363674)
chr8 (6-144)||(26140059-26140197)
chr8 (47-144)||(15032494-15032591)
chr8 (47-144)||(38034095-38034192)
chr8 (26-143)||(42603380-42603497)
chr8 (16-144)||(18440465-18440593)
chr8 (16-144)||(26452241-26452369)
chr8 (16-144)||(40702276-40702404)
chr8 (47-144)||(22548210-22548307)
chr8 (26-91)||(33799774-33799839)
chr8 (29-144)||(40415186-40415301)
chr8 (49-140)||(41275343-41275434)
chr8 (42-144)||(42169130-42169232)
chr8 (50-144)||(43693087-43693181)
chr8 (6-67)||(26139953-26140014)
chr8 (47-144)||(26484524-26484621)
[»] scaffold0027 (1 HSPs)
scaffold0027 (7-141)||(36554-36688)
[»] scaffold0589 (1 HSPs)
scaffold0589 (47-144)||(2206-2303)
[»] scaffold0181 (1 HSPs)
scaffold0181 (47-133)||(24844-24930)
[»] scaffold0004 (1 HSPs)
scaffold0004 (49-118)||(63917-63986)
[»] scaffold0176 (1 HSPs)
scaffold0176 (50-118)||(1732-1800)


Alignment Details
Target: chr6 (Bit Score: 184; Significance: 2e-99; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 10104397 - 10104173
Alignment:
Q  189 tgttggattgata-tatgttgttattgagctttcgtcgtccgtcacagaccgcgttgagtccttctccatcagtgggggtggtgtctatgcacgtgctcc 287  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10104397 tgttggattgataatatgttgttattgagctttcgtcgtccgtcacagaccgcgttgagtccttctccatcagtgggggtggtgtctatgcacgtgctcc 10104298  T
Q  288 atcgcccatgtccgcccatgtcaacgaggggttcaatagatgctgacaattaaacatcaacaacaacaacacatgcaaatgaatcttttcttcaactatg 387  Q
    ||||||||||||          ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10104297 atcgcccatgtc----------aattaggggttcaatagatgctgacaattaaacatcaacaacaacaacacatgcaaatgaatcttttcttcaactatg 10104208  T
Q  388 tttttatcttcagcttaattcaatttcatctttct 422  Q
    |||||||||||||||||||||||||||||||||||    
T  10104207 tttttatcttcagcttaattcaatttcatctttct 10104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 20242440 - 20242282
Alignment:
Q  12 atcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctc--aaggattaactggatgaaatcaaccaaggactgaaccctggagacaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  20242440 atcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctctcaaggatcaactggatgaaatcaaccaaggactcaaccccggagacaca 20242341  T
Q  110 aggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    ||||| ||||||||||||||||||||||||||||| ||||| | | | |||||||||||    
T  20242340 aggagagtgaaatacatttggtatgaacgtccaacgttggacgacaggagaataacgtt 20242282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 22136424 - 22136266
Alignment:
Q  12 atcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctc--aaggattaactggatgaaatcaaccaaggactgaaccctggagacaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  22136424 atcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctctcaaggatcaactggatgaaatcaaccaaggactcaaccccggagacaca 22136325  T
Q  110 aggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    ||||| ||||||||||||||||||||||||||||| ||||| | | | |||||||||||    
T  22136324 aggagagtgaaatacatttggtatgaacgtccaacgttggacgacaggagaataacgtt 22136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 28051268 - 28051426
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| | ||| ||||| |||||||||||||||    
T  28051268 tcagatgttcaaagttcggtacattaatgtcacgttaaaaggtcttaaggatcaacttgatgaaatcaaccatgaactcaaccccggagacacaaggagg 28051367  T
Q  116 gtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcg 174  Q
    ||||||||||||||||||||||||||||| ||||| | ||| ||||||||||| |||||    
T  28051368 gtgaaatacatttggtatgaacgtccaacgttggacgacgggagaataacgttcagtcg 28051426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 33718974 - 33719104
Alignment:
Q  20 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtga 119  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||| |||| || ||||||||| ||||| | ||||| ||||| | ||||| |||||    
T  33718974 atgttcatggttcggtacattaatgtcacgttaagaggtctcaacgatcaactagaggaaatcaactaaggaatcaaccccggagatataaggaaggtga 33719073  T
Q  120 aatacatttggtatgaacgtccaacattgga 150  Q
    ||||||||||||||||||||||||| |||||    
T  33719074 aatacatttggtatgaacgtccaacgttgga 33719104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 14483119 - 14482962
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | | |||||           
T  14483119 tggaaatcctcagatgttcaagtttcggtacattaatgtcacgttaaaaggtctcaaggatcaactggatgaaatcaaccaggaaatcaaccc------- 14483027  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcg 174  Q
        ||| |||||||||||||||||||||||||||||  ||||| | ||||||||||| ||| |||||    
T  14483026 ---cggatggtgaaatacatttggtatgaacgtccaatgttggacgacggaagaataatgttcagtcg 14482962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 34132490 - 34132644
Alignment:
Q  14 catcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaagga 113  Q
    |||||||||||||||||| | ||||| |||||||||||||||| |||||||||| | |||||||||||||| |||||||| |||||  | || | |||||    
T  34132490 catcagatgttcaaggtttgatacatcaatgtcacgttaaaagatctcaaggatcatctggatgaaatcaatcaaggactcaaccccagtgaaaaaagga 34132589  T
Q  114 gggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
     ||||||||  ||||||||| |||||||||| |||||   ||| |||||||||||    
T  34132590 aggtgaaatgtatttggtataaacgtccaacgttggactacgggagaataacgtt 34132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 2402172 - 2402261
Alignment:
Q  87 aaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcgac 176  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||| | ||| ||||||||||| |||||||    
T  2402172 aaggactcaaccccggagacacacggagggtggaatacatttggtatgaacgtccaacgttggacgacgggagaataacgttcagtcgac 2402261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 20192290 - 20192372
Alignment:
Q  86 caaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| | | | |||||||||||    
T  20192290 caaggactcaaccccggagacacaaggagagtgaaatacatttggtatgaacgtccaacgttggacgacaggagaataacgtt 20192372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 22143701 - 22143619
Alignment:
Q  86 caaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| | | | |||||||||||    
T  22143701 caaggactcaaccccggagacacaaggagagtgaaatacatttggtatgaacgtccaacgttggacgacaggagaataacgtt 22143619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 6205394 - 6205523
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  6205394 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 6205493  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  6205494 gtggaacacatttggtataaacgtccaaca 6205523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 14114979 - 14115075
Alignment:
Q  48 cgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| | ||||  |||||||||||||||||| || || ||  |||| ||||||||||    
T  14114979 cgttaagaggtctcaaggatgaactggatgaattcaaccaaggagtcaacctcggagacacaaggagggtgcaaaacgttcagtataaacgtccaac 14115075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 18744262 - 18744219
Alignment:
Q  20 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18744262 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaa 18744219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 27640100 - 27640218
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| ||||   |||| ||||||||||| | |||||  |||||||||||| |||| || |||    
T  27640100 aaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactcactgaattcaaccaaggagtcaaccccagagacacaaggatggtggaacaca 27640199  T
Q  126 tttggtatgaacgtccaac 144  Q
    |||||||| ||||||||||    
T  27640200 tttggtataaacgtccaac 27640218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 801086 - 801203
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| ||||||| ||||||||||||| |||||  |||| |||||| || | |  ||||  ||||||||||||||||| |||||     
T  801086 aaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgagtgaattcaaccgagaagtcgaccccagagacacaaggagggtggaatacg 801185  T
Q  126 tttggtatgaacgtccaa 143  Q
    |||||||| |||||||||    
T  801186 tttggtataaacgtccaa 801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 11692361 - 11692490
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  | || ||||||||||| | |||||  |||||||||||| |    
T  11692361 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactaaattcaaccaaggagtcaacccgagagacacaaggatg 11692460  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  11692461 gtggaacacatttggtataaacgtccaaca 11692490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 32027896 - 32027796
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaacat 146  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||  || || || ||||| ||||||||||||    
T  32027896 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggttgaacacgttcggtataaacgtccaacat 32027797  T
Q  147 t 147  Q
    |    
T  32027796 t 32027796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 32037955 - 32037855
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaacat 146  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||  || || || ||||| ||||||||||||    
T  32037955 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggttgaacacgttcggtataaacgtccaacat 32037856  T
Q  147 t 147  Q
    |    
T  32037855 t 32037855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 3766020 - 3765918
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  3766020 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 3765921  T
Q  116 gtg 118  Q
    |||    
T  3765920 gtg 3765918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 29066502 - 29066591
Alignment:
Q  55 aggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  29066502 aggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacaccttcggtataaacgtccaac 29066591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 29075515 - 29075604
Alignment:
Q  55 aggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  29075515 aggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacaccttcggtataaacgtccaac 29075604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 18744205 - 18744157
Alignment:
Q  95 aaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaa 143  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  18744205 aaccccggagacacaaggagggtggaatacatttggtacgaacgtccaa 18744157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 34803195 - 34803067
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||| |||||| |||||  |||| ||||||||||| | || ||  ||||||||||||||    
T  34803195 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtcttaaggatgaactgactgaattcaaccaaggagtcaatcccagagacacaaggagg 34803096  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  34803095 gtggaacacgttcggtataaacgtccaac 34803067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 13402443 - 13402545
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||||| ||  ||| ||||||| ||||||||||||| |||||  |||| |||||||| || | |||||  ||||||||||||||    
T  13402443 tcagaggttgaaggttaggtaccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaagagtcaaccccagagacacaaggagg 13402542  T
Q  116 gtg 118  Q
    |||    
T  13402543 gtg 13402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 22305716 - 22305834
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||| ||| |||||  |||| ||||||||||| | |||||   ||||||||||| |||| || ||     
T  22305716 aaggttcggtgccttggtgtaacgttaagaggtctcaaagataaactgactgaattcaaccaaggagtcaaccccaaagacacaaggatggtggaacacg 22305815  T
Q  126 tttggtatgaacgtccaac 144  Q
    |||||||| ||||||||||    
T  22305816 tttggtataaacgtccaac 22305834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 29108060 - 29108178
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||| ||| ||||||||||||| |||||  |||| | ||||||||| | |||||  ||||||||||||||||| || ||     
T  29108060 aaggttcggtgccttggtgtaacgctaagaggtctcaaggatgaactgactgaatttaaccaaggagtcaaccccagagacacaaggagggtggaacacc 29108159  T
Q  126 tttggtatgaacgtccaac 144  Q
    | |||||| ||||||||||    
T  29108160 tgtggtataaacgtccaac 29108178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 17465586 - 17465538
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaa 55  Q
    |||| ||| |||||||||||||||||| |||||||||| ||||||||||    
T  17465586 tggaaatcctcagatgttcaaggttcgttacattaatggcacgttaaaa 17465538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 35060241 - 35060165
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||| ||||||| ||||||||||||| ||||| ||||| |||||||| || | |||||  ||||| |||||||||||    
T  35060241 atgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaacgagttaaccccagagacgcaaggagggtg 35060165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 17465532 - 17465494
Alignment:
Q  106 cacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  17465532 cacaaggagagtgaaatacatttgttatgaacgtccaac 17465494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 29110486 - 29110576
Alignment:
Q  55 aggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaagga-gggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| ||||| || || || ||||| ||||||||||    
T  29110486 aggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggatgggtggaacaccttcggtataaacgtccaac 29110576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 19242733 - 19242809
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||||||||||| | | |||||| || || ||||||| |||||| |||| ||| | ||||||||||| ||||||    
T  19242733 atgtcacgttaaaagatatgaaggatcaattgaatgaaattaaccaaagactcaactccggagacacaagaagggtg 19242809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 20244130 - 20244178
Alignment:
Q  69 aactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    ||||| |||||||||| ||| |||| ||||||| |||||||||||||||    
T  20244130 aactgaatgaaatcaatcaatgactcaaccctgaagacacaaggagggt 20244178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 21865129 - 21865089
Alignment:
Q  78 aaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  21865129 aaatcaatcaaggactcaaccccggagacacaaggagggtg 21865089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 22138114 - 22138162
Alignment:
Q  69 aactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    ||||| |||||||||| ||| |||| ||||||| |||||||||||||||    
T  22138114 aactgaatgaaatcaatcaatgactcaaccctgaagacacaaggagggt 22138162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 31992241 - 31992083
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  31992241 tcagatgttcacagttcggtacattaatgtcacgttaaaaggtctcaaggatcaactagatgaaatcaaccaaggactcaaccccggagacacaaggagg 31992142  T
Q  116 gtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcg 174  Q
    ||||||||||||||||||||||||||||  ||||| | ||| |||||||||||||||||    
T  31992141 gtgaaatacatttggtatgaacgtccaatgttggacgacgggagaataacgttaagtcg 31992083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 18878414 - 18878574
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  18878414 tcagatgttcaaggttcggtaaattaatgtcacgttaaaaggtcttaaggatcaactagatgaaatcaaccaaggactcaaccccggagacacaaggagg 18878513  T
Q  116 gtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcgac 176  Q
    | | ||||||||||||||||||||||||| ||||| | | | ||||||||||| |||||||    
T  18878514 ggggaatacatttggtatgaacgtccaacgttggacgacaggagaataacgttcagtcgac 18878574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 15891949 - 15891794
Alignment:
Q  19 gatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| ||| |||||| |||||||| ||||||||    
T  15891949 gatgttcaaggttcggtacattaatgtcacggtaaaaggtctcaagaatcaactggatgaaatcaacaaagaactcaaccctagagacacacggagggtg 15891850  T
Q  119 aaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcg 174  Q
     |||||||||||||||||||| |||||||||| | ||  ||||||||||| |||||    
T  15891849 gaatacatttggtatgaacgttcaacattggacgacgagagaataacgttcagtcg 15891794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 27650732 - 27650598
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||| | || || |||||||||| ||||    
T  27650732 tcagatgttcaaggttcggtacattaatgtcacgttaaatggtctcaatgatcaactgggtgaaatcaaccaaggattcaatcccggagacacaaagagg 27650633  T
Q  116 gtgaaatacatttggtatgaacgtccaacattgga 150  Q
    ||||||||||||||||||||||||||||| |||||    
T  27650632 gtgaaatacatttggtatgaacgtccaacgttgga 27650598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 26617790 - 26617653
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| ||| |  |||||    
T  26617790 tggaaatcctcagttgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactaaatgaaatcaaccaatgactcaactccagagac 26617691  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  26617690 acaaggagggtggaatacgtttggtatgaacgtccaac 26617653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 168
Target Start/End: Original strand, 11718645 - 11718807
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcac-gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggaga 105  Q
    |||| ||| ||| ||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||| ||||||||||||| ||||| ||||| |||||    
T  11718645 tggaaatcctcaaatgttcaaggttcggtacattaatgtcattgttaaaaggtctcaatgatcaactgcatgaaatcaaccatggactcaaccccggaga 11718744  T
Q  106 cacaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||| |  || |||||||||||    
T  11718745 cacaaggagggtggaatacatttggtatgaacgtccagcgttggacgatgggagaataacgtt 11718807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 11679404 - 11679242
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcac-gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggaga 105  Q
    |||| ||| ||| ||||||||||||||||||||||||||||  |||||||| |||||| ||| ||||| |||| |||||||| ||||| ||||| |||||    
T  11679404 tggaaatcctcaaatgttcaaggttcggtacattaatgtcattgttaaaagatctcaatgatcaactgcatgagatcaaccatggactcaaccccggaga 11679305  T
Q  106 cacaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |  || |||||||||||    
T  11679304 cacaaggagggtggaatacatttggtatgaacgtccaacgttggacgatgggagaataacgtt 11679242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 18036460 - 18036310
Alignment:
Q  20 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtga 119  Q
    |||||||||||| ||||||  ||||||| ||||||||||||||||||| |||||||||||||  |||||||||| ||||| | |||||||||||||||||    
T  18036460 atgttcaaggtttggtacaacaatgtcatgttaaaaggtctcaaggatcaactggatgaaattcaccaaggactcaaccccgaagacacaaggagggtga 18036361  T
Q  120 aatacatttggtatgaacgtccaacattggatggcggaagaataacgttaa 170  Q
    ||||||||||||||||| ||||||| || || | | | |||||||||||||    
T  18036360 aatacatttggtatgaatgtccaacgtttgacgacaggagaataacgttaa 18036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 17424699 - 17424828
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||| |||||||||||| |    
T  17424699 tcagaggtttaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccctagagacacaaggatg 17424798  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  17424799 gtggaacacatttggtataaacgtccaaca 17424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 20148059 - 20148156
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| || || ||||| ||||||||||| | ||||| |||||||||||||||||||||||  || ||||| ||||||||||    
T  20148059 acgttaagaggtctcaaggatgaaatgaatgaattcaaccaaggagtcaaccccggagacacaaggagggtgaaatatgttcggtataaacgtccaac 20148156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 29906492 - 29906620
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||  ||||  ||||||||    
T  29906492 tcagaggttgaaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccagagatgcaaggagg 29906591  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  29906592 gtggaatacgttcggtataaacgtccaac 29906620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 42241394 - 42241267
Alignment:
Q  17 cagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggaggg 116  Q
    |||| ||| |||||||||| | ||| ||| ||||||| |||||| |||||| ||||   |||| ||||||||||| | |||||  |||||||||||||||    
T  42241394 cagaggttgaaggttcggtgccttagtgtaacgttaagaggtctaaaggataaactcactgaattcaaccaaggagtcaaccccagagacacaaggaggg 42241295  T
Q  117 tgaaatacatttggtatgaacgtccaac 144  Q
    ||||| ||||| ||||| ||||||||||    
T  42241294 tgaaacacattcggtataaacgtccaac 42241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 22493191 - 22493309
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| ||||||| ||||||||| ||| ||||| ||||| ||||||||||| | |||||  ||||| ||||||||||| |||||     
T  22493191 aaggttcggtgccttgatgtaacgttaagaggtctcaaagatcaactgaatgaattcaaccaaggagtcaaccccagagacgcaaggagggtggaatacg 22493290  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  22493291 ttcggtataaacgtccaac 22493309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 3937360 - 3937231
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  3937360 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 3937261  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  3937260 gtggaacacatttggtataaacgtccaaca 3937231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 12968572 - 12968471
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    |||| ||||||| |||||| |||||| ||||| ||||| ||||||||||| | |||||  ||||||||||||||||| ||||| || ||||| |||||||    
T  12968572 atgtaacgttaagaggtcttaaggatcaactgaatgaattcaaccaaggagtcaaccccagagacacaaggagggtggaatacgttcggtataaacgtcc 12968473  T
Q  142 aa 143  Q
    ||    
T  12968472 aa 12968471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 27130774 - 27130677
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||  |||||||||||||||||| || ||||| ||||| ||||||||||    
T  27130774 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacctcggagacacaaggagggtggaacacattcggtataaacgtccaac 27130677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 35491545 - 35491673
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  35491545 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 35491644  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  35491645 gtggaacacgttcggtataaacgtccaac 35491673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 10364923 - 10364805
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || ||     
T  10364923 aaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacg 10364824  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  10364823 ttcggtataaacgtccaac 10364805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 32734583 - 32734685
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    |||| ||||||| ||||||||| ||| ||||| ||||| |||||||| || | |||||  ||||||||||||||||| ||||| |||||||| ||||| |    
T  32734583 atgtaacgttaagaggtctcaaagatcaactgaatgaattcaaccaatgagtcaaccccagagacacaaggagggtggaatacgtttggtataaacgttc 32734682  T
Q  142 aac 144  Q
    |||    
T  32734683 aac 32734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 40678911 - 40678782
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  40678911 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 40678812  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| ||  | || ||||| |||||||||||    
T  40678811 gtggaacgcgttcggtataaacgtccaaca 40678782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 43982766 - 43982895
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||| ||| | |||||  |||||||||||| |    
T  43982766 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccatggagtcaaccccagagacacaaggatg 43982865  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  43982866 gtggaacacatttggtataaacgtccaaca 43982895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 5306752 - 5306652
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||||| |  || |||||| |||| ||||||||||||||| |||| || || | ||||||||| |||||| ||||| |||||||||||| |||    
T  5306752 atgtcacgttaaaggaacttaaggatcaacttgatgaaatcaaccaacgactcaatcccgaagacacaagaagggtggaatacgtttggtatgaacttcc 5306653  T
Q  142 a 142  Q
    |    
T  5306652 a 5306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 39800138 - 39800010
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   ||||||||||| |    
T  39800138 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccaaagacacaaggatg 39800039  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  39800038 gtggaacacgtttggtataaacgtccaac 39800010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 19471920 - 19471802
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  | || ||||||||||| | |||||  ||||||||||||||||| || ||     
T  19471920 aaggttcggtgcctttgtgtaacgttaagaggtctcaaggatgaactgactaaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacg 19471821  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  19471820 ttcggtataaacgtccaac 19471802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 42119948 - 42120050
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    |||| ||||||| ||||||||||||| ||||||||||  ||||||||||| | |||||  ||||  ||||||||||| ||||| || ||||| || ||||    
T  42119948 atgtaacgttaagaggtctcaaggatcaactggatgagttcaaccaaggagtcaaccccagagatgcaaggagggtggaatacgttcggtataaatgtcc 42120047  T
Q  142 aac 144  Q
    |||    
T  42120048 aac 42120050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 16253386 - 16253515
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| ||||||||| || ||  ||||||||||| |||| |||||||| |||||  |||| | ||||||||| | |||||  | ||||||||||||    
T  16253386 tcagaggttgaaggttcggcacgttggtgtcacgttaagaggtatcaaggatcaactgagtgaatttaaccaaggagtcaacccccgggacacaaggagg 16253485  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| ||||| || ||||| |||| ||||||    
T  16253486 gtggaatacgttcggtataaacgcccaaca 16253515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 5420411 - 5420507
Alignment:
Q  48 cgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||||| ||||||||||||| |||||  |||| |||||||| || | ||||| |||||||||||||||||| || || || | ||| ||||||||||    
T  5420411 cgttaagaggtctcaaggatgaactgactgaattcaaccaatgagtcaaccccggagacacaaggagggtggaacacgttcgatataaacgtccaac 5420507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 34638876 - 34639003
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| ||||  ||| ||||||| ||||||||||||| ||||   |||| ||||||||||| | |||||  |||||||||||| |    
T  34638876 tcagaggttgaaggttcggtgcattggtgtaacgttaagaggtctcaaggatcaacttactgaattcaaccaaggagtcaaccccagagacacaagga-g 34638974  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  34638975 gtggaacaccttcggtataaacgtccaac 34639003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 37312791 - 37312663
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| | ||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  37312791 tcagaggttgaaggttcggtgccttggtgtaatgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacccccgagacacaaggagg 37312692  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
     || || || || ||||| ||||||||||    
T  37312691 atggaacacgttcggtataaacgtccaac 37312663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 16581732 - 16581859
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| || |||| |||||| |||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  16581732 tcagaggttgaaggttcggtgccttggtgtaacattaagaggtctgaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 16581831  T
Q  116 gtgaaatacatttggtatgaacgtccaa 143  Q
    ||| || || || ||||| |||||||||    
T  16581832 gtggaacacgttcggtataaacgtccaa 16581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 17796400 - 17796298
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| ||||| ||||| ||||| | ||| | ||||| ||||||||| |||||    
T  17796400 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgaatgaattcaactagggagtcaaccccggagacacagggagg 17796301  T
Q  116 gtg 118  Q
    |||    
T  17796300 gtg 17796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 39393811 - 39393929
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| | ||||||||||| |||||  |||| ||||||||||| | ||||   ||||||||||||||||| || ||     
T  39393811 aaggttcggtgccttggtgtaacgttaagaagtctcaaggatcaactgactgaattcaaccaaggagtcaacctcagagacacaaggagggtgtaacacc 39393910  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  39393911 ttcggtataaacgtccaac 39393929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 3941678 - 3941775
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||| | | |||||  ||||||||||||||||| || || ||  |||| ||||||||||    
T  3941678 acgttaagaggtctcaaggatcaactgactgaattcaaccaagaagtcaaccccagagacacaaggagggtggaacaccttcagtataaacgtccaac 3941775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 10360464 - 10360367
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||| ||| |||||  |||| ||||||||||| | ||||| ||| |||||||||||||| || || ||  |||| ||||||||||    
T  10360464 acgttaagaggtctcaaagatgaactgactgaattcaaccaaggagtcaaccccggaaacacaaggagggtggaacacgttctgtataaacgtccaac 10360367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 29067640 - 29067767
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| |||||||| || | |||||   ||||||||||| |    
T  29067640 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaa-gagtcaaccccaaagacacaaggatg 29067738  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  29067739 gtggaacacgtttggtataaacgtccaac 29067767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 34521945 - 34521856
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtc 140  Q
    |||| ||||||||||||| ||||   |||| ||||||||||| | ||||| | ||||||||||||||||||| || || ||||| ||||||    
T  34521945 ttaagaggtctcaaggatgaactaactgaattcaaccaaggagtcaacccag-agacacaaggagggtgaaacacgttcggtataaacgtc 34521856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 6901915 - 6902004
Alignment:
Q  55 aggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||||||| ||||| ||||| ||||| | | | | ||||| |||||||||||||||||  || ||||| || || ||||||||||    
T  6901915 aggtctcaaggatgaactgaatgaattcaactaggaagtcaaccccggagacacaaggagggttgaacacattcggcataaacgtccaac 6902004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 6976779 - 6976876
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| |||| |||||| | ||| |  ||||||||||||||||| || |  || ||||| ||||||||||    
T  6976779 acgttaagaggtctcaaggatgaactgactgaattcaaacaaggagtcaactccagagacacaaggagggtggaacatgttcggtataaacgtccaac 6976876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 20530022 - 20529945
Alignment:
Q  41 aatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||||||||  || | | ||||||||| ||||| ||||||||| | |||| |||| | |||||||||||||||||    
T  20530022 aatgtcacgttattagatttgaaggattaattggatcaaatcaaccgacgactcaaccatagagacacaaggagggtg 20529945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 31770273 - 31770401
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||| || || || ||||| |||||||||||   |||||   |||||||||||||    
T  31770273 tcagacgttgaaggttcggtgccttggtgtaacgttaagaggtctcaagaatgaaatgaatgaattcaaccaaggagccaaccccatagacacaaggagg 31770372  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
     || ||||  || ||||| ||||||||||    
T  31770373 atgtaatatgttcggtataaacgtccaac 31770401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 18146869 - 18147025
Alignment:
Q  18 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  18146869 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggatcaactgaatgaaatcaaccaaggactcaaccccggagacacaaggagggt 18146968  T
Q  118 gaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcg 174  Q
    | ||||| ||||||||||||||||||| ||||| | | | ||||||||||| |||||    
T  18146969 ggaatacttttggtatgaacgtccaacgttggacgacaggagaataacgttcagtcg 18147025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 3380990 - 3380830
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||    
T  3380990 tggaaatcctcagatgttcaaggttcggtgcattaatgtgacgttaaaaggtctcaaggatcaactggatgaaatcaa-caaggactcaaccccggagac 3380892  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  3380891 acaaggagagtgaaatacatttggtatgaacgtccaacgttggacgacgggagaataacgtt 3380830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 28066158 - 28066306
Alignment:
Q  20 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtga 119  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| || ||||| || |||||||||||||||     
T  28066158 atgttcaaggttcggtacattaatgtcacgttaaaaggtcttaaggatcaactagatgaaatcaaccaaggtctcaaccccggcgacacaaggagggtgt 28066257  T
Q  120 aatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    |||||||||||||||||| |||||| ||||| | |||||||||||||||    
T  28066258 aatacatttggtatgaacatccaacgttggacgacggaagaataacgtt 28066306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 149978 - 150121
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||    
T  149978 tggaaatcctcatatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaagaatcaactggatgaaatcaaccaaggactcaaccttggagac 150077  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattgga 150  Q
    ||||| |||||| ||||||||||||||||||||| ||| |||||    
T  150078 acaagaagggtggaatacatttggtatgaacgtctaacgttgga 150121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 7 - 168
Target Start/End: Original strand, 12082821 - 12082982
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||||| |||| ||||| ||||||    
T  12082821 tggaaatcctcaaatgttcaaggttcggtacattaatgtcacgttaaaatgtcttaaggatcagctggatgaaatcaaccaacgactcaaccccggagac 12082920  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    |||||||||||| |||||||||||||||||||| |||| ||||| | ||| || ||||||||    
T  12082921 acaaggagggtggaatacatttggtatgaacgttcaacgttggacgacgggaggataacgtt 12082982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 11824583 - 11824740
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||||  ||||     
T  11824583 tggaaatcctcagatgttcaaggtccagtacattaatgtcacgttaaaaggtctcaaggatcaacgggatgaaatcaaccaagcactcaacccctgagaa 11824682  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattggatggcggaagaataa 164  Q
    |||||||| |||||||| ||||||||| ||| |||||| ||||| | ||| |||||||    
T  11824683 acaaggagagtgaaataaatttggtataaacatccaacgttggacgacgggagaataa 11824740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 27318144 - 27318001
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||| |||||||| || ||||||||||||||| |||||||||| | |||||| ||||| |||||||||| |||||||| || | |||||||    
T  27318144 tggaaatcctcagctgttcaagattgggtacattaatgtcatgttaaaaggtttgaaggatcaactgaatgaaatcaatcaaggactcaatcttggagac 27318045  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattgga 150  Q
    |||||||||||| || ||||||||||||||||||| ||||||||    
T  27318044 acaaggagggtggaaaacatttggtatgaacgtccgacattgga 27318001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 26603494 - 26603376
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | ||||   ||||||||||||||||| |||||     
T  26603494 aaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagttaacctcagagacacaaggagggtggaatacg 26603395  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  26603394 ttcggtataaacgtccaac 26603376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 8726503 - 8726391
Alignment:
Q  30 ttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttg 129  Q
    |||||||| ||  ||||||||||  ||||||||||||| |||| |||||| ||||||||||| | ||||||| |||||||||||||||| ||||  || |    
T  8726503 ttcggtaccttggtgtcacgttacgaggtctcaaggatcaacttgatgaattcaaccaaggagtcaaccctgtagacacaaggagggtggaataagttcg 8726404  T
Q  130 gtatgaacgtcca 142  Q
    |||| ||||||||    
T  8726403 gtataaacgtcca 8726391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 10522976 - 10523104
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||| |||||||||||| |    
T  10522976 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccctagagacacaaggatg 10523075  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  10523076 gtggaacacgtttggtataaacgtccaac 10523104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 40588457 - 40588585
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||| ||||||||||||||    
T  40588457 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgattgaattcaaccaaggagtcaaccctagagacacaaggagg 40588556  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  40588557 gtggaacaccttcggtataaacgtccaac 40588585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 17183151 - 17183249
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||| | ||||||||||||||||| || || |||||||| |||||||||||    
T  17183151 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccttagagacacaaggagggtgtaacacgtttggtataaacgtccaaca 17183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 20564667 - 20564796
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  20564667 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 20564766  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  20564767 gtggaacacatttggtataaacgtccaaca 20564796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 48221041 - 48220913
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| || |||| ||||||| ||||||||| ||| |||||  |||| ||||||||||| | |||||  ||||  ||||||||    
T  48221041 tcagaggttgaaggttcggtaccttgatgtaacgttaagaggtctcaatgatgaactgactgaattcaaccaaggagtcaaccccagagatgcaaggagg 48220942  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  48220941 gtggaatacgttcggtataaacgtccaac 48220913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 20379001 - 20378875
Alignment:
Q  17 cagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggaggg 116  Q
    |||| ||| |||||||| | | || |||| ||||||| ||||||||||||| || || || || ||||||||||| | |||||  |||||||||||||||    
T  20379001 cagaggttgaaggttcgatgccttgatgtaacgttaagaggtctcaaggatcaattgaataaattcaaccaaggagtcaaccccagagacacaaggaggg 20378902  T
Q  117 tgaaatacatttggtatgaacgtccaa 143  Q
    || ||||| || ||||| |||||||||    
T  20378901 tggaatacgttcggtataaacgtccaa 20378875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 21187559 - 21187470
Alignment:
Q  55 aggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||||||||||| || || ||||| ||||||||||    
T  21187559 aggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtgaaacacgttcggtataaacgtccaac 21187470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 30360425 - 30360542
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||| | | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||   |||||||||||||    
T  30360425 tcagaggttgaaggttcgatgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccatagacacaaggagg 30360524  T
Q  116 gtgaaatacatttggtat 133  Q
    ||| ||||| || |||||    
T  30360525 gtggaatacgttcggtat 30360542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 1642853 - 1642757
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||| ||||||||||||| || || ||||| ||||||||||| | || || |||||||||||||||||| ||||| |||| ||| ||||| |||||    
T  1642853 gttaagaggtctcaaggatcaattgaatgaattcaaccaaggagtcaatcccggagacacaaggagggtggaatacgtttgatataaacgttcaaca 1642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 28979321 - 28979193
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   |||||||||||||    
T  28979321 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccatagacacaaggagg 28979222  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  28979221 gtggaacacgttcggtataaacgtccaac 28979193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 17839245 - 17839359
Alignment:
Q  30 ttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttg 129  Q
    |||||||| ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |||| || || ||||    
T  17839245 ttcggtaccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggatggtggaagacgtttg 17839344  T
Q  130 gtatgaacgtccaac 144  Q
    | || ||||||||||    
T  17839345 gaataaacgtccaac 17839359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 42682898 - 42682992
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  42682898 ttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 42682992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 42735202 - 42735299
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||||| || || || ||||| ||||||||||    
T  42735202 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacagaaggagggtggaacacgttcggtataaacgtccaac 42735299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 48315448 - 48315351
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||| | |||||||||| || || |||||||| ||||||||||    
T  48315448 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagatagaaggagggtggaacacgtttggtataaacgtccaac 48315351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 26926458 - 26926514
Alignment:
Q  62 aaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||||| ||||| |||||||||| ||||||||||| || ||||||||||||||||||    
T  26926458 aaggatcaactgaatgaaatcaatcaaggactgaaacccggagacacaaggagggtg 26926514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 36394090 - 36393994
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   |||||||||||||||| || || || ||||| |||||||||||    
T  36394090 gttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccaaagacacaaggagggtggaacacgttcggtataaacgtccaaca 36393994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 46862493 - 46862365
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| | ||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||    
T  46862493 tcagaggttgaaggttcggtgccttggtgtaatgttaagaggtctcaaggatgaactgattgaattcaaccaaggagtcaaccccagagacagaaggagg 46862394  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  46862393 gtggaacacgttcggtataaacgtccaac 46862365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 48270556 - 48270684
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||||| ||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||    
T  48270556 tcagaggttgaaggttcggtgccttggtgtaacgttaaaaagtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacaaaaggagg 48270655  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || |||||  |||||||||    
T  48270656 gtggaacacgttcggtatagacgtccaac 48270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 3924782 - 3924845
Alignment:
Q  78 aaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||| |||| |||||| ||||||||||||||||| ||||| |||| ||| |||||||    
T  3924782 aaatcaaccaaagactcaaccctagagacacaaggagggtggaatacgtttgatataaacgtcc 3924845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 15338173 - 15338102
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||| ||||||||||||| || || ||||| ||||||||||| | |||||  |||||||||||||||||    
T  15338173 acgttaagaggtctcaaggatgaaatgaatgaattcaaccaaggattcaaccccagagacacaaggagggtg 15338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 7062164 - 7062241
Alignment:
Q  41 aatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||||| |||| | ||| |||||  ||||| |||||||||| ||||| || |||||||||||| |||||||||||    
T  7062164 aatgtcacgctaaaggatctgaaggaacaactgaatgaaatcaatcaaggcctcaaccctggagacgcaaggagggtg 7062241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 45363511 - 45363414
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||| | | |||||  ||||||||||||||||| || || ||  |||| ||||||||||    
T  45363511 acgttaagaggtctcaaggatcaactgactgaattcaaccaagaagtcaaccccagagacacaaggagggtggaacaccttcagtataaacgtccaac 45363414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 18237472 - 18237596
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| ||||||  ||||||||||||| ||||| ||||| ||||||||| | | ||| |  ||||| |||||| |    
T  18237472 tcagaggttgaaggttcggtgccttgatgtaacgttacgaggtctcaaggatcaactgaatgaattcaaccaagaagtcaactccagagacgcaaggatg 18237571  T
Q  116 gtgaaatacatttggtatgaacgtc 140  Q
    ||| ||||| || ||||| ||||||    
T  18237572 gtggaatacgttcggtataaacgtc 18237596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 43351398 - 43351270
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| ||||   |||| ||||||||||| |  ||||  ||||||||||||||    
T  43351398 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactaactgaattcaaccaaggagtctaccccagagacacaaggagg 43351299  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  43351298 gtggaacacgttcagtataaacgtccaac 43351270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 13916775 - 13916869
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||| |||| |||||||| |||||  |||| ||||||||| | | |||||  |||||||||||| |||| || ||||||||||| ||||||||||    
T  13916775 gttaagaggtttcaaggatgaactgactgaattcaaccaag-agtcaaccccagagacacaaggatggtggaacacatttggtataaacgtccaac 13916869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 47268819 - 47268889
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaacc 86  Q
    ||||| ||| |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||    
T  47268819 tcagaggttgaaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaacc 47268889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 12309839 - 12309799
Alignment:
Q  78 aaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  12309839 aaatcaaccaaggactcaaccccggagacacaaagagggtg 12309799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 21650462 - 21650534
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaacc-ctggagacacaaggagggtg 118  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||| |  |||||||||||||||||    
T  21650462 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccacctgagacacaaggagggtg 21650534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 34140807 - 34140875
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||| ||||||||||||| |||||  |||| ||| ||||| | | |||||| |||||||||||||||||    
T  34140807 ttaagaggtctcaaggatgaactgactgaattcagccaagaagtcaaccctagagacacaaggagggtg 34140875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 4e-51; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 25360892 - 25360738
Alignment:
Q  19 gatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  25360892 gatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggatcaactggatgaaatcaaccaaggactcaaccccgaagacacaaggagggtg 25360793  T
Q  119 aaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtc 173  Q
     ||||||||||||||||| ||| ||| ||| | | ||| ||||||||||| ||||    
T  25360792 gaatacatttggtatgaaagtcgaacgttgtacgacgggagaataacgttcagtc 25360738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 13131395 - 13131252
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| |||||||| ||||| ||||||    
T  13131395 tggaaatcctcaaatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggatcaacgagatgaaatcaatcaaggactcaaccccggagac 13131296  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattgga 150  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  13131295 acaaggagaatgaaatacatttggtatgaacgtccaacattgga 13131252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 18920632 - 18920782
Alignment:
Q  18 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||| |||||||| || |||||    
T  18920632 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggatcaactagatgaaatcaaccaaagactcaaccccggagacacgagaagggt 18920731  T
Q  118 gaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    ||||||||||||||||||||||  ||| ||||| | ||| |||||||||||    
T  18920732 gaaatacatttggtatgaacgtttaacgttggacgacgggagaataacgtt 18920782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 36312255 - 36312098
Alignment:
Q  17 cagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggaggg 116  Q
    |||||||||||| |||  ||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||| |||||||| |||||||    
T  36312255 cagatgttcaagcttcaatacattaatatcacgttaaaatgtctcaaggatcaacttgatgaaatcaaccaaggactcaaccccggagacacgaggaggg 36312156  T
Q  117 tgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcg 174  Q
    || ||||||||||||||||||||||||||||||| | | | |||||||||||||||||    
T  36312155 tggaatacatttggtatgaacgtccaacattggacgaccggagaataacgttaagtcg 36312098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 15798392 - 15798258
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||     
T  15798392 tcagatgttcaaggttctttacattaatgtcacgttaaaaggtctcaaggatcaactgaatgaaatcaactaaggactcaaccccggagacacaaggaga 15798293  T
Q  116 gtgaaatacatttggtatgaacgtccaacattgga 150  Q
    ||||||||||||||||||||| | ||||| |||||    
T  15798292 gtgaaatacatttggtatgaatgcccaacgttgga 15798258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 12067889 - 12067774
Alignment:
Q  21 tgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaa 120  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||| |    
T  12067889 tgttcaaggttcggtacattaatgtcgcgttaaaaggtctcaaagatcaactgaatgaaatcaaccaaggactgaaccccggagacacaaggagagtgga 12067790  T
Q  121 atacatttggtatgaa 136  Q
    ||||||||||||||||    
T  12067789 atacatttggtatgaa 12067774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 17195678 - 17195535
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||||||||||||||  |||| ||||||||||||||||||  | ||||| || ||||||||||||||||||||||||| ||||| ||||||    
T  17195678 tggaaatcctcagatgttcaaggtctggtatattaatgtcacgttaaaatttttcaagaatcaactggatgaaatcaaccaaggactaaaccccggagac 17195579  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattgga 150  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||    
T  17195578 acaaggagggtgaaatacattaggtatgaacgtcaaacgttgga 17195535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 19747966 - 19748121
Alignment:
Q  18 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| | || || ||||||||||||||||||| |||||   ||||||||| |||||    
T  19747966 agatgttcaaggtttggtaaattaatgtcacgttaaaaggtctcaaggctcaattgcatgaaatcaaccaaggactcaaccccaaagacacaagaagggt 19748065  T
Q  118 gaaatacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtc 173  Q
    | |||||||||| |||||||||||||| |||||   ||| ||||||||||| ||||    
T  19748066 ggaatacatttgatatgaacgtccaacgttggacaacgggagaataacgttcagtc 19748121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 2599124 - 2599255
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||||| ||  |||||| |||| || |||||||||| ||||| ||||| ||||||||||| | ||||| |||||||||||||||    
T  2599124 tcagaggttaaaggtttggtaccttggtgtcaccttaagagatctcaaggatcaactgaatgaattcaaccaaggagtcaaccccggagacacaaggagg 2599223  T
Q  116 gtgaaatacatttggtatgaacgtccaacatt 147  Q
    ||| ||||| || ||||| |||||||||||||    
T  2599224 gtggaatacgttcggtataaacgtccaacatt 2599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 23228969 - 23228852
Alignment:
Q  15 atcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggag 114  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||| |           ||||||||||||||| ||| ||||| ||||||||||||||    
T  23228969 atcagatattcaaggttctgtacattaatgtcatgttaaaaggtctcga-----------atgaaatcaaccaagaactcaaccccggagacacaaggag 23228881  T
Q  115 ggtgaaatacatttggtatgaacgtccaa 143  Q
    |||| ||||||| || |||||||||||||    
T  23228880 ggtggaatacatctgatatgaacgtccaa 23228852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 1971301 - 1971398
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||| |||||||||||||||||| || || |||||||| ||||||||||    
T  1971301 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccggagacacaaggagggtggaacacgtttggtataaacgtccaac 1971398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 19400268 - 19400396
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| ||||| | ||||||||||||| ||||| ||||| ||||||||||| | |||||  |||||||||||| |    
T  19400268 tcagaggttgaaggttcggtgccttgatgtaacgttgagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccagagacacaaggatg 19400367  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  19400368 gtggaatacgttcggtataaacgtccaac 19400396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 12742630 - 12742748
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    ||||||||| || ||  ||||||||||| |||| |||||||| ||||  ||||| ||||||||||| | ||||| ||||||||||| |||||| |||||     
T  12742630 aaggttcggcaccttggtgtcacgttaagaggtatcaaggatcaactaaatgaattcaaccaaggagtcaaccccggagacacaagaagggtggaatacg 12742729  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  12742730 ttcggtataaacgtccaac 12742748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 12805448 - 12805566
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    ||||||||| || ||  ||||||||||| |||| |||||||| ||||  ||||| ||||||||||| | ||||| ||||||||||| |||||| |||||     
T  12805448 aaggttcggcaccttggtgtcacgttaagaggtatcaaggatcaactaaatgaattcaaccaaggagtcaaccccggagacacaagaagggtggaatacg 12805547  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  12805548 ttcggtataaacgtccaac 12805566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 40009459 - 40009561
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    |||| ||||||| ||||||||||||| || || ||||| ||||||||||| | |||||| ||||| ||||||||||| ||||| || ||||| |||||||    
T  40009459 atgtaacgttaagaggtctcaaggatcaaatgaatgaattcaaccaaggagtcaaccctagagacgcaaggagggtggaatacgttcggtataaacgtcc 40009558  T
Q  142 aac 144  Q
    |||    
T  40009559 aac 40009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 1400604 - 1400476
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||| ||| |||||  |||| ||||||||||| | ||||| |||||||||||||||    
T  1400604 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaatgatgaactgactgaattcaaccaaggagtcaaccccggagacacaaggagg 1400505  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  1400504 gtggaacacgttcggtataaacgtccaac 1400476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 8576443 - 8576315
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  8576443 tcagaggttgaaggttcggtgctttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 8576344  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  8576343 gtggaacacgtttggtataaacgtccaac 8576315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 11346614 - 11346742
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  11346614 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 11346713  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  11346714 gtggaacacgtttggtataaacgtccaac 11346742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 28880896 - 28881024
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  28880896 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 28880995  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || ||||||||||  ||||||||||    
T  28880996 gtggaaaacatttggtacaaacgtccaac 28881024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 541906 - 541809
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  541906 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacaccttcggtataaacgtccaac 541809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 19036976 - 19036847
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||| ||||| | |||||  |||||||||||| |    
T  19036976 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaacaaaggagtcaaccccagagacacaaggatg 19036877  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  19036876 gtggaacacatttggtataaacgtccaaca 19036847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 3458741 - 3458869
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||  | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||   |||| ||||||||    
T  3458741 tcagaggttgaaggttcggcgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccaaagacgcaaggagg 3458840  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| || |||||||    
T  3458841 gtggaatacgttcggtataaatgtccaac 3458869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 11027682 - 11027810
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   ||||||||||| |    
T  11027682 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccaaagacacaaggatg 11027781  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  11027782 gtggaacacgtttggtataaacgtccaac 11027810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 38854063 - 38854191
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   ||||||||||| |    
T  38854063 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccaaagacacaaggatg 38854162  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  38854163 gtggaacacgtttggtataaacgtccaac 38854191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 6793688 - 6793566
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  6793688 tcagaagttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 6793589  T
Q  116 gtgaaatacatttggtatgaacg 138  Q
     || || ||||| ||||| ||||    
T  6793588 atggaacacattcggtataaacg 6793566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 18308196 - 18308293
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| | ||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  18308196 acgttaagaagtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 18308293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 33370590 - 33370667
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatac 124  Q
    ||||||| ||||||||||||| ||||| ||||| | ||| | ||||| ||||| |||||||||||||||||| |||||    
T  33370590 acgttaagaggtctcaaggatgaactgaatgaatttaactagggactcaaccccggagacacaaggagggtggaatac 33370667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 7531 - 7403
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| || |||||||||| |||||  |||| | ||||||||| | |||||  |||||||||||| |    
T  7531 tcagaggttgaaggttcggtgccttggtgtaacgttaagagatctcaaggatgaactgactgaattgaaccaaggagtcaaccccagagacacaaggatg 7432  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  7431 gtggaacacgtttggtataaacgtccaac 7403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 4724376 - 4724248
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||  |||||  |||| ||||||||||| | |||||  ||||||||||||      
T  4724376 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggaaaaactgactgaattcaaccaaggagtcaaccccagagacacaaggaaa 4724277  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || ||||| ||||| ||||||||||    
T  4724276 gtggaacacattcggtataaacgtccaac 4724248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 8537859 - 8537987
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  8537859 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 8537958  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||| ||||    
T  8537959 gtggaacacgttcggtataaacgttcaac 8537987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 17367006 - 17366930
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaata 123  Q
    ||||||| ||||||||||||| ||||| ||||| || |||||||| | ||||| | |||||||||||||||| ||||    
T  17367006 acgttaagaggtctcaaggatgaactgaatgaattctaccaaggagtcaaccccgtagacacaaggagggtggaata 17366930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 30709503 - 30709631
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   ||| ||||||| |    
T  30709503 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccaaagatacaaggatg 30709602  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  30709603 gtggaacacgtttggtataaacgtccaac 30709631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 27661679 - 27661577
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  27661679 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 27661580  T
Q  116 gtg 118  Q
    |||    
T  27661579 gtg 27661577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 7082228 - 7082325
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| |||||| |||||| ||||   |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  7082228 acgttaagaggtctaaaggatgaactcactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 7082325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 3601246 - 3601374
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| |||||||||| ||| | ||  ||| ||||||| ||||||||| ||| |||||  |||| |||| |||||| | |||||  ||||||||||||||    
T  3601246 tcagaggttcaaggtttggtgccttggtgtaacgttaagaggtctcaaagatgaactgactgaattcaatcaaggagtcaaccccagagacacaaggagg 3601345  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||  || | ||| ||||| ||||||||||    
T  3601346 gtagaacatattcggtataaacgtccaac 3601374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 21290558 - 21290614
Alignment:
Q  62 aaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||||| ||||| ||||||||||||||||||| ||||| |||||| ||| |||||||    
T  21290558 aaggatcaactgaatgaaatcaaccaaggactcaaccccggagacgcaaagagggtg 21290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 35565177 - 35565301
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||  |||||  |||| ||||||||||| | |||||  |||||| |||||||    
T  35565177 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggacgaactgactgaattcaaccaaggagtcaaccccagagacataaggagg 35565276  T
Q  116 gtgaaatacatttggtatgaacgtc 140  Q
    ||| || || || ||||| ||||||    
T  35565277 gtggaacacgttcggtataaacgtc 35565301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 35927708 - 35927612
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaa 143  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||| | ||||  ||||||||||  |||||| || || || | ||| |||||||||    
T  35927708 acgttaagaggtctcaaggatgaactgaatgaattcaaccaaggagtcaacctcggagacacaattagggtgtaacacgttcgttataaacgtccaa 35927612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 140
Target Start/End: Original strand, 37396635 - 37396731
Alignment:
Q  41 aatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtc 140  Q
    |||| ||||||||||  ||| |||||| ||||||||||  |||||||| |||| ||||  | |||||||||||||||| ||||  |||||||||||||||    
T  37396635 aatgccacgttaaaatatctgaaggatcaactggatga--tcaaccaatgactcaaccacgaagacacaaggagggtg-aataggtttggtatgaacgtc 37396731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 7576382 - 7576283
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||||||| ||| |||||  | || |||||||||| |||| | || ||||  |||||||||||||||| | || || |||| |||||||||||    
T  7576382 atgtcacgttaaaagatcttaaggaacagctcgatgaaatcatccaacggctcaaccacggagacacaaggaggg-ggaagacgtttgttatgaacgtcc 7576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 16418373 - 16418297
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||||||||||||||  || |||| | ||||| || |||||||||||||||| ||||| | ||| | ||||||||||    
T  16418373 atgtcacgttaaaagaactgaagggtcaactgaattaaatcaaccaaggactcaaccccgcagatagaaggagggtg 16418297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 23124835 - 23124685
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23124835 tcagatgttcaaggatcggtacattaatgtcacgttaaaaggtctcaaggatcaactggatgaaatcaaccaaggactcaaccccggagacacaaggagg 23124736  T
Q  116 gtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacg 166  Q
    ||| |||| ||||||| |||  ||||||| ||||| | |||||||||||||    
T  23124735 gtgtaatatatttggtgtgattgtccaacgttggacgacggaagaataacg 23124685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 17291850 - 17291993
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| |||||  |||||    
T  17291850 tggaaatcctcaaatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggatcagctagatgaaatcaaccaaggactcaacccccgagac 17291949  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattgga 150  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||    
T  17291950 acaaggagagtgaaatacgtttggtatgaacgtccaacgttgga 17291993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 13866169 - 13866300
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| ||  ||||||||||| ||||||||||||| ||||| ||||| ||||| ||||| | |||||  ||||||||||||||    
T  13866169 tcagaggttgaaggttcggtaccttggtgtcacgttaagaggtctcaaggatcaactgaatgaattcaactaaggagtcaaccccagagacacaaggagg 13866268  T
Q  116 gtgaaatacatttggtatgaacgtccaacatt 147  Q
    ||| ||| | |||||||| |||||||||||||    
T  13866269 gtggaatgcgtttggtataaacgtccaacatt 13866300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 4785723 - 4785599
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| || |||| ||||||||||||||||||| ||||| ||||||||||| | |||||  ||||||||||||||    
T  4785723 tcagaggttgaaggttcggtgccttgatgtaaccttaagaggtctcaaggattaactgaatgaattcaaccaaggagtcaaccccagagacacaaggagg 4785624  T
Q  116 gtgaaatacatttggtatgaacgtc 140  Q
    ||| || ||||| ||||| ||||||    
T  4785623 gtggaacacattcggtataaacgtc 4785599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 12227766 - 12227669
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgt 139  Q
    ||||||||||||||||||| ||| || ||||| || |||||||||||||||| |||| || ||| |||||||||||| ||||  ||||||||||||||    
T  12227766 atgtcacgttaaaaggtctgaagaatcaactgaattaaatcaaccaaggactaaaccgtgaagatacaaggagggtggaatatgtttggtatgaacgt 12227669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 18412528 - 18412629
Alignment:
Q  43 tgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcca 142  Q
    ||||||||||| |||| |||||||| ||||| ||||| ||||||||||| | ||||| ||||||||||| |||||| ||||| || ||||| ||||||||    
T  18412528 tgtcacgttaagaggtatcaaggatcaactgaatgaattcaaccaaggagtcaaccccggagacacaagaagggtggaatacgttcggtataaacgtcca 18412627  T
Q  143 ac 144  Q
    ||    
T  18412628 ac 18412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 20759435 - 20759329
Alignment:
Q  20 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtga 119  Q
    |||||||||||| | |||||||||||||||||||||||||||||| || |||| ||||||||||      ||||  |||| |||||||||||||||||      
T  20759435 atgttcaaggtttgatacattaatgtcacgttaaaaggtctcaagaatcaactagatgaaatca------gactcgaccccggagacacaaggagggtag 20759342  T
Q  120 aatacatttggta 132  Q
    |||||||||||||    
T  20759341 aatacatttggta 20759329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 20765826 - 20765720
Alignment:
Q  20 atgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtga 119  Q
    |||||||||||| | |||||||||||||||||||||||||||||| || |||| ||||||||||      ||||  |||| |||||||||||||||||      
T  20765826 atgttcaaggtttgatacattaatgtcacgttaaaaggtctcaagaatcaactagatgaaatca------gactcgaccccggagacacaaggagggtag 20765733  T
Q  120 aatacatttggta 132  Q
    |||||||||||||    
T  20765732 aatacatttggta 20765720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 13850655 - 13850783
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||||| ||  |||||| |||| |||||| | |||| ||||| ||||| ||||||||||| | |||||  ||||||||||||||    
T  13850655 tcagaggttgaaggtttggtaccttggtgtcacattaagaggtcttacggatcaactgaatgaattcaaccaaggagtcaaccccagagacacaaggagg 13850754  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| |||||||| ||||||||||    
T  13850755 gtggaatacgtttggtataaacgtccaac 13850783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 242717 - 242588
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  242717 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 242618  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || || || ||||| |||||||||||    
T  242617 gtggaacacgttcggtataaacgtccaaca 242588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 6177616 - 6177487
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  6177616 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 6177517  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  6177516 gtggaacacatttggtataaacgtccaaca 6177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 17211203 - 17211300
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| ||||  ||||| ||||||||||| | |||||  ||||||||||||||||| ||||| || ||||| ||||||||||    
T  17211203 acgttaagaggtctcaaggatgaactaaatgaattcaaccaaggagtcaacccatgagacacaaggagggtggaatacgttcggtataaacgtccaac 17211300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 25762535 - 25762632
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| |||||| || ||| |||||| |||| ||||||||||| | ||||| |||||||||||||||||| || ||||| ||||| ||||||||||    
T  25762535 acgttaagaggtcttaatgatgaactggctgaattcaaccaaggagtcaaccccggagacacaaggagggtggaacacattcggtataaacgtccaac 25762632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 41794863 - 41794734
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  41794863 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 41794764  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  41794763 gtggaacacatttggtataaacgtccaaca 41794734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 56138816 - 56138945
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  56138816 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 56138915  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  56138916 gtggaacacatttggtataaacgtccaaca 56138945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 3393210 - 3393338
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| ||||  ||||| |||||||| || | ||||| |||||||||||||||    
T  3393210 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatcaactaaatgaattcaaccaatgagtcaaccccggagacacaaggagg 3393309  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || | ||| ||||||||||    
T  3393310 gtggaatacgttcgatataaacgtccaac 3393338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 21017478 - 21017350
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  21017478 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 21017379  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  21017378 gtggaacacgtttggtataaacgtccaac 21017350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 44560481 - 44560353
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| ||  ||| | ||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||  ||||||||||||||    
T  44560481 tcagaggttgaaggttcggtaccttggtgtaatgttaagaggtctcaaggatgaactgaatgaattcaaccaaggagtcaaccccagagacacaaggagg 44560382  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  44560381 gtggaacacgttcagtataaacgtccaac 44560353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 49792237 - 49792109
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  49792237 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgattgaattcaaccaaggagtcaaccccagagacacaaggagg 49792138  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  49792137 gtggaacacgttcggtataaacgtccaac 49792109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 21412826 - 21412699
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||  | ||| ||| || |||| ||||||||||||| ||||| ||||| ||||||||||| | ||||  |||||||||||||||    
T  21412826 tcagaggttgaaggttcggggccttagtgtaacattaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccacggagacacaaggagg 21412727  T
Q  116 gtgaaatacatttggtatgaacgtccaa 143  Q
    ||| ||||| |  ||||| |||||||||    
T  21412726 gtggaatacgtccggtataaacgtccaa 21412699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 20901938 - 20901841
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||||| |||||||||||||||  || || || ||||| ||||||||||    
T  20901938 acgttaagaggtctcaaggatgaactgattgaattcaaccaaggagtcaaccctgaagacacaaggagggtagaacacgttcggtataaacgtccaac 20901841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 22436848 - 22436945
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  22436848 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 22436945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 28082175 - 28082272
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |||| || || |||||||| ||||||||||    
T  28082175 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggatggtggaacacgtttggtataaacgtccaac 28082272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 32938203 - 32938074
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | ||||    |||||||||||||    
T  32938203 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgaatgaattcaaccaaggagtcaaccacatagacacaaggagg 32938104  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || || || ||||| |||||||||||    
T  32938103 gtggaacacgttcggtataaacgtccaaca 32938074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 51028037 - 51027940
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||||| |||||  ||||||||||||| ||| || || || ||||| ||||||||||    
T  51028037 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggactcaaccccagagacacaaggagagtggaacacgttcggtataaacgtccaac 51027940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 1226066 - 1226193
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||| | || |||| ||||||| | ||||||||||| ||||| ||||| ||||||||||| | |||||  ||||||| ||||||    
T  1226066 tcagaggttgaaggtttggtgccttgatgtaacgttaagaagtctcaaggatcaactgaatgaattcaaccaaggagttaaccccagagacac-aggagg 1226164  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| |||| ||| ||||||||||    
T  1226165 gtggaatacgtttgctataaacgtccaac 1226193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 11288201 - 11288329
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| || || ||||| ||||||| ||| | ||||| | |||||||||||||    
T  11288201 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaaatgaatgaattcaaccagggaatcaaccccgaagacacaaggagg 11288300  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| ||  |||| ||||||||||    
T  11288301 gtggaatacgttccgtataaacgtccaac 11288329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 10312179 - 10312285
Alignment:
Q  17 cagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggaggg 116  Q
    |||| ||| |||||||||| | ||  ||| ||||||| |||||| |||||| ||||| ||||| ||||||||||| | ||||| |||||||||||||| |    
T  10312179 cagaggttgaaggttcggtgccttggtgtaacgttaagaggtctgaaggatgaactgaatgaattcaaccaaggagtcaaccccggagacacaaggagtg 10312278  T
Q  117 tgaaata 123  Q
    || ||||    
T  10312279 tggaata 10312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 42886169 - 42886271
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||| || |||||  |||| ||||||||||| | ||||| |||||||||||||||    
T  42886169 tcagaggttgaaggttcggtgctttggtgtaacgttaagaggtctcaagaatgaactgactgaattcaaccaaggagtcaacccgggagacacaaggagg 42886268  T
Q  116 gtg 118  Q
    |||    
T  42886269 gtg 42886271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 20779139 - 20779042
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||| ||| ||||| ||||| ||||||||||| | ||||| ||| ||||||| |||||| || || || ||||| ||||||||||    
T  20779139 acgttaagaggtctcaaagatgaactgaatgaattcaaccaaggagtcaaccccggacacacaagaagggtggaacacgttcggtataaacgtccaac 20779042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 40354043 - 40353946
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| |||||||| || | |||||  |||||||||||| |||| || || |||||||| ||||||||||    
T  40354043 acgttaagaggtctcaaggataaactgactgaattcaaccaaagagtcaaccccagagacacaaggatggtggaacacgtttggtataaacgtccaac 40353946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 43889769 - 43889672
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||| ||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  43889769 acgttaagaggtctcaatgatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 43889672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 47657625 - 47657528
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||| |||| ||||||||||| | |||||  ||||||||||| ||||| || || || ||||| ||| ||||||    
T  47657625 acgttaagaggtctcaaggatgaactggctgaattcaaccaaggaatcaaccccagagacacaaggtgggtggaacacgttcggtataaacatccaac 47657528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 51428462 - 51428365
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||| ||||    
T  51428462 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgttcaac 51428365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 26591986 - 26591858
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| ||| |||||||| ||  ||| ||||||| |||||||||| || |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  26591986 tcagaggttgaagattcggtaccttggtgtaacgttaagaggtctcaagaatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 26591887  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || | ||| ||||||||||    
T  26591886 gtggaacacgttcgatataaacgtccaac 26591858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 31324080 - 31324208
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| ||  ||||||||||| ||||||||||||| || || ||||| ||||||||| | | ||||| | |||||||| ||||    
T  31324080 tcagaggttgaaggttcggtaccttggtgtcacgttaagaggtctcaaggatcaattgcatgaattcaaccaagtagtcaaccccgaagacacaatgagg 31324179  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
     || ||||  ||  |||| ||||||||||    
T  31324180 atggaataggttcagtataaacgtccaac 31324208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 37866312 - 37866440
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||| ||||||||||   ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||   |||||||||| |||    
T  37866312 tcagatgttgaaggttcggtggcttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacctcagagacacaagaagg 37866411  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || ||||| ||||| ||| ||||||    
T  37866412 gtggaacacattcggtataaacatccaac 37866440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 42420948 - 42421012
Alignment:
Q  21 tgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaac 85  Q
    |||||||||||||||| |||||| |||||||||||||||| ||| || ||| | |||||||||||    
T  42420948 tgttcaaggttcggtatattaatatcacgttaaaaggtctaaagaatcaaccgaatgaaatcaac 42421012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 45939462 - 45939533
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||| | ||||||||||||||||    
T  45939462 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccgaagacacaaggagggtg 45939533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 957723 - 957649
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaata 123  Q
    ||||| ||||||||||||| |||||  |||| ||||||||||| | ||||| ||||||| |||||||||| ||||    
T  957723 gttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccggagacataaggagggtggaata 957649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 31824920 - 31824802
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| | ||||| || |||||||||| ||||| ||||| ||||||||||| | ||| |  ||||  ||||||||||| |||||     
T  31824920 aaggttcggtgccttgatgtaaagttaagagctctcaaggatcaactgaatgaattcaaccaaggagtcaactccagagatgcaaggagggtggaatacg 31824821  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  31824820 ttcggtataaacgtccaac 31824802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 33163845 - 33163771
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaagg 90  Q
    ||||| ||| |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||    
T  33163845 tcagacgttgaaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaagg 33163771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 49424059 - 49423957
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||   |||||||||||||    
T  49424059 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccatagacacaaggagg 49423960  T
Q  116 gtg 118  Q
    |||    
T  49423959 gtg 49423957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 24075039 - 24075112
Alignment:
Q  45 tcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||| |||| | ||| |||||| ||||| |  ||||||| |||||||| ||||||||||||||||||||||||    
T  24075039 tcacgctaaaggatctgaaggatcaactgaacaaaatcaatcaaggactaaaccctggagacacaaggagggtg 24075112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 34530066 - 34529969
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| || |||||||||| |||||  |||| ||||||||||| | |||||  |||||||||| |||||| || || || ||||| ||||||||||    
T  34530066 acgttaagagatctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaagaagggtggaacaccttcggtataaacgtccaac 34529969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 49094651 - 49094780
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| || |||| || ||||||||||  ||||  |||| ||||||||| | | |||||  |||||||||||| |    
T  49094651 tcagaggttgaaggttcggtgccttggtgtaacattaagagatctcaaggatacactgactgaattcaaccaagtagtcaaccccagagacacaaggatg 49094750  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  49094751 gtggaacacatttggtataaacgtccaaca 49094780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 9489585 - 9489713
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| | ||||| ||||||||||||| ||||   |||| ||||| ||||| | ||||| |||||||||||||||    
T  9489585 tcagaggttgaaggttcggtgccttggtgtaatgttaagaggtctcaaggatcaactaactgaattcaacaaaggaatcaaccccggagacacaaggagg 9489684  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  9489685 gtggaacaccttcagtataaacgtccaac 9489713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 36776820 - 36776692
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||| ||||||| |||||  |||| ||||||||||| | |||||   |||||||||||||    
T  36776820 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtcgcaaggatgaactgactgaattcaaccaaggagtcaaccccatagacacaaggagg 36776721  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| || |||||||    
T  36776720 gtggaacacgttaggtataaatgtccaac 36776692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 1042657 - 1042759
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||| | | |||||   |||||||||||||    
T  1042657 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatcaactgactgaattcaaccaagaagtcaaccccaaagacacaaggagg 1042756  T
Q  116 gtg 118  Q
    |||    
T  1042757 gtg 1042759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 2772925 - 2773043
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| || |||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |||| || ||     
T  2772925 aaggttcggtgccttggtgtaacgttaagagatctcaaggatgaactgactgaattcaaccaaggagtcaacccgagagacacaaggatggtggaacacg 2773024  T
Q  126 tttggtatgaacgtccaac 144  Q
    || | ||| ||||||||||    
T  2773025 ttcgttataaacgtccaac 2773043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 14330964 - 14330866
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||||| |||||| |||||| || |   |||| ||||||||||| | ||| || ||||||||||||||||| || || || ||||| |||||||||||    
T  14330964 acgttaagaggtctaaaggatgaaatcactgaattcaaccaaggagtcaacgctagagacacaaggagggtggaacactttcggtataaacgtccaaca 14330866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 14772838 - 14772707
Alignment:
Q  18 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| | |||||||||||||||||    
T  14772838 agatgttcaaggttcggtacatcaatgtcacgttaaaaggtctcaaggatcaactggaagaaatcaacc-aggactcaactccggagacacaaggagggt 14772740  T
Q  118 gaaatacatttggtatgaacgtccaacattgga 150  Q
    ||||||||||||||||||||||||||| |||||    
T  14772739 gaaatacatttggtatgaacgtccaacgttgga 14772707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 48707227 - 48707086
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||| ||||||||||||  ||||||||||||| |||||||| ||| |||||| ||||| ||||||||||||||||||| ||||||||||||    
T  48707227 tggaaatcttcagttgttcaaggttcaatacattaatgtcatgttaaaagatctgaaggatcaactgaatgaaatcaaccaaggactcaaccctggagac 48707128  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattg 148  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  48707127 acaaggagggtggaatacgtttggtatgaacgtccaacattg 48707086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 31452051 - 31451900
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||| |||||||||||| |||| ||||| | ||||||||||| |    
T  31452051 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaagggtcaattggacgaaatcaaccaacgactcaaccccgaagacacaagga-g 31451953  T
Q  116 gtgaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
    ||| ||||||||||||||||||||| |||||| || | ||| |||||||||||    
T  31451952 gtggaatacatttggtatgaacgtctaacattagacgacgggagaataacgtt 31451900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 15471430 - 15471581
Alignment:
Q  22 gttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaa 121  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||| || ||||| |||||||||||||| ||| ||    
T  15471430 gttcacggttcggtacattaatttcacgttaaaaggtgtcaaggatcaactgaatgaaatcaaccaaggtctcaaccccggagacacaaggagtgtggaa 15471529  T
Q  122 tacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtc 173  Q
    ||| |||||||||||| |||||| || || |  || ||||||||||| ||||    
T  15471530 tacgtttggtatgaacatccaacgttcgacgaggggagaataacgttcagtc 15471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 19262688 - 19262568
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaa--ggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggag 104  Q
    |||| ||| ||||||||||||||||||||| |||||||||| |||||||  |||||| ||||| |||||||||||||||||||||||||  |||| | ||    
T  19262688 tggaaatcctcagatgttcaaggttcggtatattaatgtcaggttaaaaaaggtctcgaggatcaactggatgaaatcaaccaaggactccaccccgaag 19262589  T
Q  105 acacaaggagggtgaaataca 125  Q
    |||||| ||||||||||||||    
T  19262588 acacaatgagggtgaaataca 19262568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 5765143 - 5765240
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||| | ||||| ||||| |||||||||||| ||||| || ||||| ||||||||||    
T  5765143 acgttaagaggtctcaaggatgaactgaatgaattcaaccaaggagtcaaccccggagatacaaggagggtggaatacgttcggtataaacgtccaac 5765240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 18842345 - 18842473
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| ||||| ||||| ||||||||  | | ||||| |||||||||||||||    
T  18842345 tcagaggttgaaggttcggtgctttggtgtaacgttaagaggtctcaaggatgaactgaatgaattcaaccaaatagtcaaccccggagacacaaggagg 18842444  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  18842445 gtggaatacgttcggtataaacgtccaac 18842473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 29762490 - 29762393
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||| ||||||||||||||||| || || || ||||| ||||||||||    
T  29762490 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccctagagacacaaggagggtggaacaccttcggtataaacgtccaac 29762393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 36909467 - 36909595
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||| ||| ||||||| ||||||||||||| |||||  | || ||||||||||| | |||||| |||||| |||||||    
T  36909467 tcagaggttgaaggttcggtgccttagtgtaacgttaagaggtctcaaggataaactgactcaattcaaccaaggagtcaaccctagagacataaggagg 36909566  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||| | ||||||||||    
T  36909567 gtggaatacgttcggtgtaaacgtccaac 36909595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 38046734 - 38046606
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  38046734 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 38046635  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  38046634 gtggaacacgttcggtataaacgtccaac 38046606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 47488337 - 47488209
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| |||| |||||| | |||||  ||||  ||||||||    
T  47488337 tcagaggttgaaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaatcaaggagtcaaccccagagatgcaaggagg 47488238  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  47488237 gtggaatacgttcggtataaacgtccaac 47488209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 16098198 - 16098104
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| |||| |||| ||| ||||| ||||| ||||||||| | | |||||||||||||||||||||||| ||||| || ||||| ||||||||||    
T  16098198 ttaagaggtatcaaagatcaactgaatgaattcaaccaagtagtcaaccctggagacacaaggagggtggaatacgttcggtataaacgtccaac 16098104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 24270632 - 24270534
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| |||||||||||    
T  24270632 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaaca 24270534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 41875174 - 41875057
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||   |||||||||||||||| |||       
T  41875174 aaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccaaagacacaaggagggtggaattag 41875075  T
Q  126 tttggtatgaacgtccaa 143  Q
    || ||||| |||||||||    
T  41875074 ttcggtatcaacgtccaa 41875057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 50068559 - 50068430
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| | ||||| ||||||||||||| ||||| ||||| |||||||| || | |||||  ||||| ||||||||    
T  50068559 tcagaggttgaaggttcggtgccttgatgtaatgttaagaggtctcaaggatcaactgaatgaattcaaccaacgagtcaaccccagagacgcaaggagg 50068460  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| ||||  || |||||||| ||||||||    
T  50068459 gtggaatatgttcggtatgaaggtccaaca 50068430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 13283612 - 13283739
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| || |||| ||||||||||||| ||||| ||||| | ||||||||| | ||||| |||||||| ||||||    
T  13283612 tcagaggttgaaggttcggtgccttggtgtaacattaagaggtctcaaggatgaactgaatgaatttaaccaaggagtcaaccc-ggagacacgaggagg 13283710  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  13283711 gtggaatacgttcggtataaacgtccaac 13283739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 19160223 - 19160351
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||| |||| |    
T  19160223 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggataaactgactgaattcaaccaaggagtcaaccccagagacacgaggatg 19160322  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  19160323 gtggaacacgtttggtataaacgtccaac 19160351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 17696952 - 17697079
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || || | ||||||| ||||||||||||| ||||| ||||| ||||||||||| | ||  |  |||||| |||||||    
T  17696952 tcagaggttgaaggttcggtgccttcatataacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaatgccagagacataaggagg 17697051  T
Q  116 gtgaaatacatttggtatgaacgtccaa 143  Q
    ||| || || |||||||| |||||||||    
T  17697052 gtggaacacgtttggtataaacgtccaa 17697079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 17372643 - 17372761
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| ||||| |||||  |||||||||| | |||||  ||||| ||| ||||||||||||      
T  17372643 aaggttcggtgccttggtgtaacgttaagaggtctcaaggatcaactgaatgaatacaaccaaggagtcaaccccagagacgcaaagagggtgaaatatg 17372742  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  17372743 ttcggtataaacgtccaac 17372761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 27035584 - 27035490
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| ||||||||||||| || || ||||| ||||||||||| | |||||  ||||||||||||||||| ||||| |  ||||| ||||||||||    
T  27035584 ttaagaggtctcaaggatcaattgaatgaattcaaccaaggagtcaaccccagagacacaaggagggtggaatacgtccggtataaacgtccaac 27035490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 29435913 - 29436007
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  29435913 ttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 29436007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 35587195 - 35587101
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  35587195 ttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 35587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 41780630 - 41780727
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||| |||||| || || || ||||| ||||||||||    
T  41780630 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaagaagggtggaacacgttcggtataaacgtccaac 41780727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 44337588 - 44337491
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |||| || || || ||||| ||||||||||    
T  44337588 acgttaagaggtctcaaggatcaactgactgaattcaaccaaggagtcaaccccagagacacaaggatggtggaacaccttcggtataaacgtccaac 44337491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 44597638 - 44597735
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||| | | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  44597638 acgttaagaggtctcaaggatcaactgactgaattcaaccaagaagtcaaccccagagacacaaggagggtggaacaccttcggtataaacgtccaac 44597735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 51269739 - 51269836
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || ||  |||| ||||||||||    
T  51269739 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacaccttctgtataaacgtccaac 51269836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 4209188 - 4209259
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||||||||    
T  4209188 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtg 4209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 13635587 - 13635469
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||| ||| |||||  |||| ||||||||||| | |||||   ||||||||||| |||| || ||     
T  13635587 aaggttcggtgccttggtgtaacgttaagaggtctcaaagataaactgactgaattcaaccaaggagtcaaccccaaagacacaaggatggtggaacacg 13635488  T
Q  126 tttggtatgaacgtccaac 144  Q
    |||||||| ||||||||||    
T  13635487 tttggtataaacgtccaac 13635469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 14174048 - 14173930
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| || |||||||||| |||||  | || ||||||||||| | |||||  ||||||||||||||||| || ||     
T  14174048 aaggttcggtgctttggtgtaacgttaagagatctcaaggatgaactgacttaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacg 14173949  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  14173948 ttcggtataaacgtccaac 14173930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 35526467 - 35526349
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| ||| |  |||| ||||||||||| | ||||| ||||||||| |||||||| ||  |     
T  35526467 aaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaaccgactgaattcaaccaaggagtcaaccccggagacacagggagggtggaacgcg 35526368  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  35526367 ttcggtataaacgtccaac 35526349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 37777998 - 37778100
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| ||||  ||| ||| ||| | ||||||||||| |||||  |||| |||| |||||| | |||||| ||||||||||||||    
T  37777998 tcagaggttgaaggttcggtgcattggtgtaacgctaagatgtctcaaggatgaactgactgaattcaatcaaggagtcaaccctagagacacaaggagg 37778097  T
Q  116 gtg 118  Q
    |||    
T  37778098 gtg 37778100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 42572043 - 42571949
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaa 143  Q
    ||||| ||||||||||||| |||||  |||| ||||||||||| | ||||   ||||||||||||||||| || || || ||||| |||||||||    
T  42572043 gttaagaggtctcaaggatgaactgactgaactcaaccaaggagtcaacctcagagacacaaggagggtggaacacgttcggtataaacgtccaa 42571949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 45689040 - 45689134
Alignment:
Q  29 gttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaata 123  Q
    ||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| |||||||| || | |||||   |||||||||||||||| ||||    
T  45689040 gttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaactcaaccaaagagtcaaccccaaagacacaaggagggtggaata 45689134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 22529753 - 22529708
Alignment:
Q  95 aaccctggagacacaaggagggtgaaatacatttggtatgaacgtc 140  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||    
T  22529753 aaccccggagacacaaggagggttgaatacatttggtatgaacgtc 22529708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 46181852 - 46181735
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| | ||||| ||||||||||||| || || ||||| ||||||||||| | |||||  ||||| |||||| |    
T  46181852 tcagaggttgaaggttcggtgccttgatgtaatgttaagaggtctcaaggatcaattgaatgaattcaaccaaggagtcaaccccagagacgcaaggaag 46181753  T
Q  116 gtgaaatacatttggtat 133  Q
    ||| ||||| || |||||    
T  46181752 gtggaatacgttcggtat 46181735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 49599134 - 49599045
Alignment:
Q  56 ggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    |||||||||||| ||||  ||||| ||||||||||| | |||||  ||||| ||||||||||| ||||| || ||||| ||||| |||||    
T  49599134 ggtctcaaggatcaactaaatgaattcaaccaaggagtcaaccccagagacgcaaggagggtggaatacgttcggtataaacgttcaaca 49599045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 6435678 - 6435806
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| || |||| || |||||||| | |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  6435678 tcagaggttgaaggttcggtgccttggtgtaacattaagagttctcaaggttgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 6435777  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  6435778 gtggaaaacgttcggtataaacgtccaac 6435806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 13148231 - 13148295
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggag 114  Q
    |||| ||||||||||||| ||||| ||||| ||||||||||| | |||||  |||||||||||||    
T  13148231 ttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccagagacacaaggag 13148295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 26793236 - 26793336
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||||||| | | ||  || ||||| |||||||||| ||| |||| ||||   |||||||||||||||| |||||  ||| ||||||||||||    
T  26793236 atgtcacgttaaaagatataaattatcaactgaatgaaatcaagcaaagactaaaccacagagacacaaggagggtaaaatatgtttagtatgaacgtcc 26793335  T
Q  142 a 142  Q
    |    
T  26793336 a 26793336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 35184876 - 35185004
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||| |||||||| |||||  |||| ||||||||||| | | |||   |||||||||||||    
T  35184876 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtatcaaggatgaactgactgaattcaaccaaggagtcagccccaaagacacaaggagg 35184975  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  35184976 gtggaacacgttcggtataaacgtccaac 35185004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 35576305 - 35576373
Alignment:
Q  76 tgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| |||||||| || | |||||||||||||||||||||||| || || || ||||| ||||||||||    
T  35576305 tgaattcaaccaaagagtcaaccctggagacacaaggagggtggaacacgttcggtataaacgtccaac 35576373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 12791539 - 12791445
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| ||||||||||||| | |||  |||| ||||||||||| | |||||  |||||||||| |||||| || || || ||||| ||||||||||    
T  12791539 ttaagaggtctcaaggatgagctgactgaattcaaccaaggagtcaaccccagagacacaagtagggtggaacacgttcggtataaacgtccaac 12791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 23342581 - 23342675
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| |||||||| |||| |||||  |||| ||||||||||| | |||||   ||||||||||| ||||||| || || ||||| ||||||||||    
T  23342581 ttaagaggtctcagggatgaactgattgaattcaaccaaggagtcaaccccaaagacacaaggaaggtgaaacacgttcggtataaacgtccaac 23342675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 27486959 - 27486889
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    ||||||| ||||||||||||| |||||  |||| | ||||||||| | |||||  ||||||||||||||||    
T  27486959 acgttaagaggtctcaaggatgaactgactgaattaaaccaaggagtcaaccccagagacacaaggagggt 27486889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 30310095 - 30309997
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||||| |||||| |||||| |||| | |||| ||||||||||| | |||||   ||||| |||||||||| || || || ||||| |||||||||||    
T  30310095 acgttaagaggtctaaaggatgaactcgctgaattcaaccaaggagtcaaccccatagacataaggagggtggaacacgttcggtataaacgtccaaca 30309997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 49396620 - 49396738
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| |||||||| || | |||||   ||||| |||||||||| || ||     
T  49396620 aaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaacgagtcaaccccatagacataaggagggtggaacacg 49396719  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  49396720 ttcggtataaacgtccaac 49396738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 39224466 - 39224373
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtc 140  Q
    ||||||| |||||| |||||| ||||   |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||    
T  39224466 acgttaagaggtctaaaggatgaactcactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtc 39224373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 39857175 - 39857079
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaa 143  Q
    ||||||| ||||||||||||| |||||  |||| ||||| ||||| | ||||  ||||||||||| |||||| || |  || ||||| |||||||||    
T  39857175 acgttaagaggtctcaaggatgaactgactgaattcaacaaaggagtcaaccaaggagacacaagaagggtggaacatgttcggtataaacgtccaa 39857079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 48568704 - 48568576
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||| | || |||| ||||||| || | ||||| || ||||| ||||| ||||||||||| | |||||   |||||||||||||    
T  48568704 tcagaggttgaaggtttggtgccttgatgtaacgttaagagatatcaagaatcaactgaatgaactcaaccaaggagtcaaccccaaagacacaaggagg 48568605  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| |||   || ||||| ||||||||||    
T  48568604 gtggaattagttcggtataaacgtccaac 48568576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 5250 - 5400
Alignment:
Q  18 agatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggt 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||  |||||||    
T  5250 agatgttcaaggttcggtacattaatgtcatgttaaaaggtctcaaggatcaactggatgaaatcaaccaaggactcaacctaggagacacgcggagggt 5349  T
Q  118 gaaatacatttggtatgaacgtccaacattggatggcggaagaataacgtt 168  Q
      |||| |||||||||| ||||| ||| |||||   ||| |||||||||||    
T  5350 tgaatagatttggtatgcacgtctaacgttggacaacgggagaataacgtt 5400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 9e-34; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 17267609 - 17267464
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||| | || |    
T  17267609 tggaaatcctcagttgttcaaggttcggtacattaatgtcacgttaaaaggtcttaaggatcaaccgaatgaaatcaaccaaggactcaaccccgtaggc 17267510  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtccaacattggatg 152  Q
    |||||||| ||| ||||| ||| |||| || ||||||| |||||||    
T  17267509 acaaggagagtggaatacgtttagtattaatgtccaacgttggatg 17267464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 49219035 - 49218907
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||| ||||||||||||||    
T  49219035 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccctagagacacaaggagg 49218936  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  49218935 gtggaacacctttggtataaacgtccaac 49218907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 49273319 - 49273447
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||| ||||||||||||||    
T  49273319 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggaatcaaccctagagacacaaggagg 49273418  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || ||||| ||||| ||||||||||    
T  49273419 gtggaacacattcggtataaacgtccaac 49273447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 8633627 - 8633530
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| |||||||| |||| ||||| ||||| ||||||||||| | ||| | |||||||||||||||||| ||||| |||||||| ||| ||||||    
T  8633627 acgttaagaggtctcatggatgaactgaatgaattcaaccaaggagttaacacaggagacacaaggagggtggaatacgtttggtataaacatccaac 8633530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 44927414 - 44927511
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||| |||||||||||||||||| || || || ||||| ||||||||||    
T  44927414 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccggagacacaaggagggtggaacacgttcggtataaacgtccaac 44927511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 46402923 - 46403052
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  46402923 tcagaggttaaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 46403022  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  46403023 gtggaacacatttggtataaacgtccaaca 46403052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 49140353 - 49140224
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  49140353 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 49140254  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  49140253 gtggaacacatttggtataaacgtccaaca 49140224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 54390362 - 54390491
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  54390362 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 54390461  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  54390462 gtggaacacatttggtataaacgtccaaca 54390491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 4095743 - 4095843
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||||||| ||| || ||| ||||| ||||||||||| ||||||| ||||    ||||| |||||||||||||||| ||||||| ||||||||    
T  4095743 atgtcacgttaaaagatctgaatgatcaactgaatgaaatcaacaaaggactcaaccacatagacataaggagggtgaaatacgtttggtacgaacgtcc 4095842  T
Q  142 a 142  Q
    |    
T  4095843 a 4095843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 27186899 - 27186995
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaa 143  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||  ||||||||||||||||| ||||| ||| |||| || ||||||    
T  27186899 acgttaagaggtctcaaggatgaactgaatgaattcaaccaaggagtcaaccccagagacacaaggagggtggaatacgtttagtataaatgtccaa 27186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 51695905 - 51695777
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  51695905 tcagaagttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatcaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 51695806  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  51695805 gtggaacaccttcggtataaacgtccaac 51695777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 42382971 - 42383073
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||| |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||  |||||  |||||||    
T  42382971 tcagatgttgaaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccagagacgtaaggagg 42383070  T
Q  116 gtg 118  Q
    |||    
T  42383071 gtg 42383073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 10053539 - 10053442
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||| |||| ||||||||||| | |||    ||||||||||||||||| |||||||| ||||| || |||||||    
T  10053539 acgttaagaggtctcaaggatgaactggctgaattcaaccaaggagtaaacttgagagacacaaggagggtggaatacattcggtataaatgtccaac 10053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 42382191 - 42382320
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||| |||||||||| | || |||| |||||||  |||||||||||| ||||| ||||| ||||||||||| | |||||  |||||  |||||||    
T  42382191 tcagatgttgaaggttcggtgccttgatgtaacgttaagtggtctcaaggatcaactgaatgaattcaaccaaggagtcaaccccagagacgtaaggagg 42382290  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| | ||| ||  |||| |||||||||||    
T  42382291 gtggactacgttcagtataaacgtccaaca 42382320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 53826985 - 53826868
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || || | ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||| ||||||||||| |||||     
T  53826985 aaggttcggtgccttgatttaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacgcaaggagggtggaatacg 53826886  T
Q  126 tttggtatgaacgtccaa 143  Q
    || ||||| |||||||||    
T  53826885 ttcggtataaacgtccaa 53826868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 13896169 - 13896041
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| || |||| ||||||||||||| |||||  |||| |||||||| || | |||||| ||||||||||||||    
T  13896169 tcagaggttgaaggttcggtgccttggtgtaacattaagaggtctcaaggatgaactgactgaattcaaccaatgagtcaaccctagagacacaaggagg 13896070  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  13896069 gtggaacacgttcggtataaacgtccaac 13896041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 14265328 - 14265456
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| ||  ||||| |||||  ||||| |||||| ||||| ||||| ||||||||||| | |||||  |||||||||||| |    
T  14265328 tcagaggttgaaggttcggtaccttggtgtcatgttaagtggtcttaaggatcaactgaatgaattcaaccaaggagtcaaccccagagacacaaggaag 14265427  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||| ||||||    
T  14265428 gtggaatacgttcggtataaacatccaac 14265456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 20378185 - 20378089
Alignment:
Q  17 cagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaagga 113  Q
    |||| ||| |||||||||| | ||| ||||||||||| |||||| |||||| ||||  ||||| ||||||||||| | ||||| |||||||||||||    
T  20378185 cagaggttgaaggttcggtgccttagtgtcacgttaagaggtctaaaggatcaactaaatgaattcaaccaaggagtcaaccccggagacacaagga 20378089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 36134928 - 36135056
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  || | |||||||| || | |||||| |||||||||||| |    
T  36134928 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactggattcaaccaatgagtcaaccctagagacacaaggatg 36135027  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||||||| ||||||||||    
T  36135028 gtggaacacgtttggtataaacgtccaac 36135056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 44835786 - 44835678
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| ||||||| |||||| |||||| ||||  ||||| ||||||||||| | |||||| ||||| ||||||||    
T  44835786 tcagaggttgaaggttcggtgccttgatgtaacgttaagaggtcttaaggatcaactaaatgaattcaaccaaggagtcaaccctagagacgcaaggagg 44835687  T
Q  116 gtgaaatac 124  Q
    ||| |||||    
T  44835686 gtggaatac 44835678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 46414633 - 46414505
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  46414633 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 46414534  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||| ||||||    
T  46414533 gtggaacacgttcggtataaacatccaac 46414505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 47065607 - 47065735
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||| | || |||| || |||| ||||||||||||| ||||| ||||| ||||||||||| | ||| |  ||||||||||||||    
T  47065607 tcagaggttgaaggtttggtgccttgatgtaacattaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaactccagagacacaaggagg 47065706  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| ||  |||| ||||||||||    
T  47065707 gtggaatacgttcagtataaacgtccaac 47065735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 49610409 - 49610537
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  49610409 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatcaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 49610508  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || | ||| ||||||||||    
T  49610509 gtggaacaccttcgatataaacgtccaac 49610537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 51013577 - 51013449
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||| ||| |||||  |||| ||||||||||| | |||||  ||||||||||||||    
T  51013577 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaatgatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagg 51013478  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  51013477 gtggaacacgttcggtataaacgtccaac 51013449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 39417237 - 39417119
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| | ||||    |||||||||||||||| |||       
T  39417237 aaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggagtcaacctcaaagacacaaggagggtggaattag 39417138  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  39417137 ttcggtataaacgtccaac 39417119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 43569840 - 43569958
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||||| || ||     
T  43569840 aaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacagaaggagggtggaacacg 43569939  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  43569940 ttcggtataaacgtccaac 43569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 2428438 - 2428535
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||||| || || || ||||| ||||||||||    
T  2428438 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacagaaggagggtggaacacgttcggtataaacgtccaac 2428535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 4004386 - 4004269
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  4004386 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 4004287  T
Q  116 gtgaaatacatttggtat 133  Q
    ||| || || ||||||||    
T  4004286 gtggaacacgtttggtat 4004269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 11379012 - 11378915
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| || |||||||| | ||| | |||||||||||||||||| || || || ||||| ||||||||||    
T  11379012 acgttaagaggtctcaaggatgaactgactgaattctaccaaggagtcaacaccggagacacaaggagggtggaacacgttcggtataaacgtccaac 11378915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 14631396 - 14631493
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||   ||||||||||||||||| || || || ||||| ||||||||||    
T  14631396 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacctcagagacacaaggagggtggaacacgttcggtataaacgtccaac 14631493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 34049647 - 34049776
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| || |||| |||||||||||||  ||||  |||| ||||||||||| | |||||  |||||||||||| |    
T  34049647 tcagaggttgaaggttcggtgccttggtgtaacattaagaggtctcaaggatacactgactgaattcaaccaaggagtcaaccccagagacacaaggatg 34049746  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| ||||| |||||    
T  34049747 gtggaacacatttggtataaacgttcaaca 34049776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 34472344 - 34472247
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||    |||||||||||||||| || ||||| ||||| ||||||||||    
T  34472344 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacctcaaagacacaaggagggtggaacacattcggtataaacgtccaac 34472247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 3495328 - 3495200
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| ||  ||| ||||||||||||||||||||| ||||   | || |||||||| || | |||||  |||||||||||| |    
T  3495328 tcagaggttgaaggttcggtaccttggtgtaacgttaaaaggtctcaaggataaactaactaaattcaaccaatgagtcaaccccagagacacaaggatg 3495229  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || |||| ||| ||||||||||    
T  3495228 gtggaacacgtttgatataaacgtccaac 3495200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 141
Target Start/End: Complemental strand, 29635177 - 29635077
Alignment:
Q  41 aatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtc 140  Q
    ||||||| |||||||  ||| ||||||  |||||||||||||| | || |||| |||| || | |||||||||||||| || || |||||||||||||||    
T  29635177 aatgtcaggttaaaatatctgaaggatcgactggatgaaatcatctaacgactcaaccgtgaatacacaaggagggtggaagacgtttggtatgaacgtc 29635078  T
Q  141 c 141  Q
    |    
T  29635077 c 29635077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 51015197 - 51015325
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| |  ||||   |||||||||||||    
T  51015197 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcgaccccaaagacacaaggagg 51015296  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  51015297 gtggaacacgttcggtataaacgtccaac 51015325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 7954154 - 7954252
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaaca 145  Q
    ||||||| ||||||||||||  ||||| ||||| ||||| | | | | ||||| |||||||||||||||||| ||||| || || || |||||||||||    
T  7954154 acgttaagaggtctcaaggaagaactgaatgaattcaactaggtagtcaaccccggagacacaaggagggtggaatacgttcggcataaacgtccaaca 7954252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 30192492 - 30192586
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| |||||||||| || |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  30192492 ttaagaggtctcaagtatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 30192586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 33449407 - 33449330
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatac 124  Q
    ||||||||||||||||| ||| ||||| |||||  ||| |||||| | |||||   ||||||||||||||||||||||    
T  33449407 acgttaaaaggtctcaaagatcaactgaatgaatccaatcaaggagtcaaccccaaagacacaaggagggtgaaatac 33449330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 34647535 - 34647438
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| || |||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || ||  |||| ||||||||||    
T  34647535 acgttaagagatctcaaggatgaactgactgaattcaaccaaggagtcaacccccgagacacaaggagggtggaacacgttcagtataaacgtccaac 34647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 24702570 - 24702442
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||| ||| |||||  |||| | ||||||||| | |||||   |||||||||||||    
T  24702570 tcagaggttaaaggttcggtgccttggtgtaacgttaagaggtctcaaagatgaactgactgaattgaaccaaggagtcaaccccatagacacaaggagg 24702471  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  24702470 gtggaacacgttcggtataaacgtccaac 24702442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 34693588 - 34693461
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| | ||||||||| | || ||| ||||||||||||||    
T  34693588 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactgactgaatttaaccaaggagttaa-ccttgagacacaaggagg 34693490  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  34693489 gtggaacaccttcagtataaacgtccaac 34693461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 41803823 - 41803950
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||| || ||||||| | ||  ||| |||||||| |||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||    
T  41803823 tcagatgttgaaagttcggtgccttggtgtgacgttaaa-ggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacaaaaggagg 41803921  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||| ||||    
T  41803922 gtggaacacgttcggtataaacgttcaac 41803950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 42328384 - 42328288
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaa 143  Q
    ||||||| |||||| |||||| |||||  |||| ||| ||||||| | |||||  ||||||||||||||||| || || || ||||| |||||||||    
T  42328384 acgttaagaggtctaaaggatgaactgactgaattcagccaaggaatcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaa 42328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 46346874 - 46346751
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||| |||| ||||||||||| | ||     ||||||||||||||    
T  46346874 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatgaactggctgaattcaaccaaggagtcaa-----gagacacaaggagg 46346780  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  46346779 gtggaacacgttccgtataaacgtccaac 46346751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 2268792 - 2268665
Alignment:
Q  17 cagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggaggg 116  Q
    |||| ||| |||||||||| | ||  ||| ||||||| |||||| |||||| |||||  |||| ||||||||||| | |||||   ||||||||||| ||    
T  2268792 cagaggttgaaggttcggtgccttggtgtaacgttaagaggtcttaaggatgaactgattgaattcaaccaaggagtcaaccccaaagacacaaggatgg 2268693  T
Q  117 tgaaatacatttggtatgaacgtccaac 144  Q
    || || |  |||||||| ||||||||||    
T  2268692 tggaacaagtttggtataaacgtccaac 2268665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 17370776 - 17370843
Alignment:
Q  75 atgaaatcaaccaaggactgaa-ccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| || || ||| ||||| ||||||    
T  17370776 atgaaatcaaccaaggacttaaccccaggagacacaaggagggtggaagacgttttgtatggacgtcc 17370843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 19453528 - 19453401
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||| ||||  ||| ||| ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||| | |||||||    
T  19453528 tcagaggttgaaggttaggtaacttagtgtaacgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagatagaaggagg 19453429  T
Q  116 gtgaaatacatttggtatgaacgtccaa 143  Q
    ||| || || || | ||| |||||||||    
T  19453428 gtggaacacgttcgatataaacgtccaa 19453401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 25576849 - 25576762
Alignment:
Q  57 gtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||||||| ||||| ||||| ||||| ||||| | |||||  ||||| ||||||||||| ||||| || ||||| ||| ||||||    
T  25576849 gtctcaaggatcaactgaatgaattcaactaaggattcaaccccagagacgcaaggagggtggaatacgttcggtataaacatccaac 25576762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 2647165 - 2647047
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||| | ||||||||||| |||||  |||| ||||| || || | |||||  |||||||||||| |||| || ||     
T  2647165 aaggttcggtgccttggtgtaacgttaagatgtctcaaggataaactgactgaattcaacgaaagagtcaaccccagagacacaaggatggtggaacacg 2647066  T
Q  126 tttggtatgaacgtccaac 144  Q
    |||||||| ||||||||||    
T  2647065 tttggtataaacgtccaac 2647047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 48087841 - 48087723
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | || |||| ||||||| ||||||||||||| ||  | ||||| ||||||||||| | |||||   ||||||||||| |||| |||       
T  48087841 aaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaaacgaatgaattcaaccaaggagtcaaccccaaagacacaaggatggtggaattag 48087742  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  48087741 ttcggtataaacgtccaac 48087723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 55207164 - 55207102
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaa 88  Q
    |||||||||| | ||| ||| ||||||||||||||||||||| |||||  |||| ||||||||    
T  55207164 aaggttcggtgccttagtgtgacgttaaaaggtctcaaggatgaactgactgaattcaaccaa 55207102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 52569676 - 52569579
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| ||||   |||| ||||||||||| | | |||  |||||| ||||| |||| || ||||| ||||| ||||||||||    
T  52569676 acgttaagaggtctcaaggatgaactaactgaattcaaccaaggagtcagccccagagacaaaaggatggtggaacacattcggtataaacgtccaac 52569579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 55391049 - 55390976
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||||||||||||| ||| || ||| ||||| |||||| ||||||| |||| ||| |  ||||||||||||||    
T  55391049 atgtcacgttaaaagatctaaatgatcaactgaatgaaagcaaccaatgactcaactccagagacacaaggagg 55390976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 29788524 - 29788424
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||||||||||| ||| ||| |||||| |||| ||| |||||||| || |||| ||||   |||||||||||||| || || || || ||||| |||||||    
T  29788524 atgtcacgttagaagatctaaaggatcaacttgatcaaatcaacaaacgactcaaccacagagacacaaggaggatggaagacgttgggtatcaacgtcc 29788425  T
Q  142 a 142  Q
    |    
T  29788424 a 29788424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 41577879 - 41577923
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaagga 91  Q
    ||||||| ||||||||||||| |||||| |||| |||||||||||    
T  41577879 acgttaagaggtctcaaggatgaactggctgaattcaaccaagga 41577923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 43477037 - 43477105
Alignment:
Q  76 tgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| ||||||||| | | |||||  ||||||||||||||||| || || |||||||| ||||||||||    
T  43477037 tgaattcaaccaagaagtcaaccccagagacacaaggagggtggaacacctttggtataaacgtccaac 43477105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 47760190 - 47760062
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||| ||| |||||  | || ||||||||| | | |||||  ||||||||||||||    
T  47760190 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaatgatgaactgattaaattcaaccaagaagtcaaccccagagacacaaggagg 47760091  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  47760090 gtggaacacgttccgtataaacgtccaac 47760062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 12505017 - 12504862
Alignment:
Q  21 tgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaa 120  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||  ||||||||||| ||| ||| |||||  ||||||||||||||||| |    
T  12505017 tgttcaaggttcggtacattaatgtcatgttaaaaggtctcaatgatcaactaaatgaaatcaacgaagaactcaaccccagagacacaaggagggtgga 12504918  T
Q  121 atacatttggtatgaacgtccaacattggatggcggaagaataacgttaagtcgac 176  Q
    |||| ||||||||||| ||||| | |  ||||  || ||||||||||| |||||||    
T  12504917 atacgtttggtatgaatgtccatcgtacgatgatgggagaataacgttcagtcgac 12504862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 31172114 - 31171986
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||||| ||  |||||| |||||||||||||||||| ||||  ||||| ||||| ||||| | ||||| |||||||||||||||    
T  31172114 tcagaggttgaaggttcggtaccttggtgtcacattaaaaggtctcaaggatcaacttaatgaattcaactaaggagtcaaccccggagacacaaggagg 31172015  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  31172014 gtggaatacgttcggtataaacgtccaac 31171986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 22843590 - 22843495
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcca 142  Q
    |||||||||| ||| |||||| |||| ||||||||||||||| |||| ||||| | | |||||||||||||| ||||| |||||||||||||||||    
T  22843590 acgttaaaagatctgaaggatcaactagatgaaatcaaccaatgacttaaccccgaaaacacaaggagggtggaatacgtttggtatgaacgtcca 22843495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 28706440 - 28706312
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | || |||| ||||||||||||| ||||||| ||||  ||||| ||||||||||| | |||||  ||||| ||||||||    
T  28706440 tcagaggttgaaggttcggtgccttgatgtaacgttaaaaggtcccaaggatcaactaaatgaattcaaccaaggagtcaaccccagagacgcaaggagg 28706341  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| ||||| || ||||| ||||||||||    
T  28706340 gtggaatacgttcggtataaacgtccaac 28706312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 34614900 - 34614997
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||| |||||||||||||||||| || || || ||||| ||||||||||    
T  34614900 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccggagacacaaggagggtggaacacgttcggtataaacgtccaac 34614997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 24861259 - 24861387
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | |  |||| ||||||| |||| |||||||| |||||  |||| ||||||||||| | |||||| ||||||||||||||    
T  24861259 tcagaggttaaaggttcggtgcctggatgtaacgttaagaggtatcaaggatgaactgactgaattcaaccaaggagtcaaccctagagacacaaggagg 24861358  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  24861359 gtggaacaccttcggtataaacgtccaac 24861387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 16575618 - 16575736
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||||| ||  ||| ||||||| ||||||||||||  ||||| ||||| ||||||| ||| | ||||  | |||||||||||||||| |||||     
T  16575618 aaggttcggtaccttggtgtaacgttaagaggtctcaaggacgaactgaatgaattcaaccagggagtcaacctcgaagacacaaggagggtggaatacg 16575717  T
Q  126 tttggtatgaacgtccaac 144  Q
    || ||||| ||||||||||    
T  16575718 ttcggtataaacgtccaac 16575736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 43638948 - 43638847
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||||| |||||  ||| | ||||||||||| ||||| || ||||| |||||||    
T  43638948 atgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaaggactcaaccccagag-cgcaaggagggtggaatacgttcggtataaacgtcc 43638850  T
Q  142 aac 144  Q
    |||    
T  43638849 aac 43638847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 485556 - 485427
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| |||||||||||||  ||||  |||| |||||||||||   |||||  |||||||||||| |    
T  485556 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatacactgactgaattcaaccaaggagccaaccccagagacacaaggatg 485457  T
Q  116 gtgaaatacatttggtatgaacgtccaaca 145  Q
    ||| || ||||||||||| |||||||||||    
T  485456 gtggaacacatttggtataaacgtccaaca 485427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 12785465 - 12785368
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaacatt 147  Q
    ||||||| ||| |||||| |||||||||||||||||||| |||| ||||  |||||||||| ||||||| || |  ||||||||||| ||||| ||||    
T  12785465 ttaaaagatctgaaggatcaactggatgaaatcaaccaatgactcaaccacggagacacaaagagggtggaagaagtttggtatgaatgtccatcatt 12785368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 19242429 - 19242332
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  19242429 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacccgagagacacaaggagggtggaacacgttcggtataaacgtccaac 19242332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 19315613 - 19315516
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  19315613 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaacccgagagacacaaggagggtggaacacgttcggtataaacgtccaac 19315516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 2416831 - 2416962
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| ||||||||||||| |||||  |||| ||||||||| | | |||||  || |||||||||||    
T  2416831 tcagaggttgaaggttcggtgccttggtgtaacgttaagaggtctcaaggatcaactgactgaattcaaccaagaagtcaaccccagaaacacaaggagg 2416930  T
Q  116 gtgaaatacatttggtatgaacgtccaacatt 147  Q
    ||| || || || ||||| |||||||||||||    
T  2416931 gtggaacaccttcggtataaacgtccaacatt 2416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 41363603 - 41363674
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | ||||| ||||||||||||||||||    
T  41363603 acgttaagaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccggagacacaaggagggtg 41363674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 26140059 - 26140197
Alignment:
Q  6 atggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggaga 105  Q
    ||||| ||| |||| || ||||| |||||||||||| ||||| |||||||||||| | |||| |  || ||||||||||||||||||  | ||  | |||    
T  26140059 atggaaatcctcagttgctcaagtttcggtacattattgtcatgttaaaaggtctgacggatcatttgaatgaaatcaaccaaggacacacccacgaaga 26140158  T
Q  106 cacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||||| ||| |||||||  |||| ||||||||| ||||    
T  26140159 cacaagaaggatgaaatatgtttgttatgaacgttcaac 26140197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 15032591 - 15032494
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||| ||||||||||| | |||||  |||||||||| | |||| || || |||||||| ||||||||||    
T  15032591 acgttaagaggtctcaaggataaactgattgaattcaaccaaggagtcaaccccagagacacaagtatggtggaacacgtttggtataaacgtccaac 15032494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 38034192 - 38034095
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| |||||  |||||||||||||||| | |||||   |||||||||||||||| || || || ||||| ||||| ||||    
T  38034192 acgttaagaggtctcaaggatgaactgactgaaatcaaccaaggagtcaaccccaaagacacaaggagggtggaacacgttcggtataaacgttcaac 38034095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 42603380 - 42603497
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaataca 125  Q
    |||||||||| | ||  ||| ||||||||||||||||||||| |||||  |||| ||||||||||| | |||||  |||||| |||||||| | || ||     
T  42603380 aaggttcggtgccttggtgtgacgttaaaaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacagaaggagggcggaacacg 42603479  T
Q  126 tttggtatgaacgtccaa 143  Q
    || ||||| |||||||||    
T  42603480 ttcggtataaacgtccaa 42603497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 18440593 - 18440465
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| | ||||||||||| |||||  |||| |||| |||||| | |||||  ||||||||||||||    
T  18440593 tcagaggttgaaggttcggtgccttggtgtaacgttaagatgtctcaaggatgaactgactgaattcaatcaaggagtcaaccccagagacacaaggagg 18440494  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  18440493 gtggaacacgttcggtataaacgtccaac 18440465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 26452241 - 26452369
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||| || |||||||||| |||||  |||| ||||||||| | | |||||  ||||||||||||||    
T  26452241 tcagaggttgaaggttcggtgccttggtgtaacgttaagagatctcaaggatcaactgactgaattcaaccaagaattcaaccccagagacacaaggagg 26452340  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || || ||||| ||||||||||    
T  26452341 gtggaacaccttcggtataaacgtccaac 26452369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 40702276 - 40702404
Alignment:
Q  16 tcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagg 115  Q
    ||||| ||| |||||||||| | ||  ||| ||||||||||||||||||||| |||||  |||| ||||||||||| | |||||  |||||| ||||||     
T  40702276 tcagaggttgaaggttcggtgccttggtgtgacgttaaaaggtctcaaggatgaactgactgaattcaaccaaggagtcaaccccagagacagaaggaga 40702375  T
Q  116 gtgaaatacatttggtatgaacgtccaac 144  Q
    ||| || || ||  |||| ||||||||||    
T  40702376 gtggaacacgttcagtataaacgtccaac 40702404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 22548210 - 22548307
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| | ||||||||||| |||||  |||| ||||| ||||| | |||||  ||||||||||||||||| || ||||| | ||| ||||||||||    
T  22548210 acgttaagatgtctcaaggatgaactgactgaattcaactaaggagtcaaccccagagacacaaggagggtggaacacattcgatataaacgtccaac 22548307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 33799839 - 33799774
Alignment:
Q  26 aaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaagga 91  Q
    |||||||||| | || |||| ||||||| ||||||||||||| ||||| ||||| |||||||||||    
T  33799839 aaggttcggtgccttgatgtaacgttaagaggtctcaaggatcaactgaatgaattcaaccaagga 33799774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 40415186 - 40415301
Alignment:
Q  29 gttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacattt 128  Q
    ||||||| | || |||| ||||||| |||||| |||||| |||| | |||| ||||||||||| | | | |  ||||||||||||||||| || || ||     
T  40415186 gttcggtgccttgatgtaacgttaagaggtctaaaggatgaactcgctgaattcaaccaaggagtcagcaccagagacacaaggagggtggaacacgttc 40415285  T
Q  129 ggtatgaacgtccaac 144  Q
    ||||| ||||||||||    
T  40415286 ggtataaacgtccaac 40415301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 41275343 - 41275434
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtc 140  Q
    ||||| |||||| |||||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||    
T  41275343 gttaagaggtcttaaggatgaactgactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacaccttcggtataaacgtc 41275434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 42169232 - 42169130
Alignment:
Q  42 atgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    |||| ||||||| ||||||||||||| |||    |||| ||||||||||| | ||||| |||||||| ||||||||| ||  | || ||||| |||||||    
T  42169232 atgtaacgttaagaggtctcaaggatgaaccaactgaattcaaccaaggagtcaaccccggagacacgaggagggtggaacgcgttcggtataaacgtcc 42169133  T
Q  142 aac 144  Q
    |||    
T  42169132 aac 42169130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 43693087 - 43693181
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    |||| |||||| |||||| ||||   |||| ||||||||||| | |||||  ||||||||||||||||| || || || ||||| ||||||||||    
T  43693087 ttaagaggtctaaaggatgaactcactgaattcaaccaaggagtcaaccccagagacacaaggagggtggaacacgttcggtataaacgtccaac 43693181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 26139953 - 26140014
Alignment:
Q  6 atggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggat 67  Q
    ||||| ||| |||| || ||||| |||||||||||| ||||| |||||||||||| ||||||    
T  26139953 atggaaatcctcagttgctcaagtttcggtacattattgtcatgttaaaaggtctgaaggat 26140014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 26484524 - 26484621
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| || |   |||| ||||||||||| | |||||   |||||||||||||||| || || || ||||| ||||||||||    
T  26484524 acgttaagaggtctcaaggatgaattaactgaattcaaccaaggagtcaaccccaaagacacaaggagggtggaacacgttcggtataaacgtccaac 26484621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 36554 - 36688
Alignment:
Q  7 tggacatcatcagatgttcaaggttcggtacattaatgtcacgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagac 106  Q
    |||| ||| |||| |||| |||||| ||||||||||||||| |||||||| |||||| ||| | ||| |||||||||||||||| || ||||| ||||||    
T  36554 tggaaatcctcagttgtttaaggtttggtacattaatgtcatgttaaaagctctcaaagatcagctgaatgaaatcaaccaaggtctcaacccaggagac 36653  T
Q  107 acaaggagggtgaaatacatttggtatgaacgtcc 141  Q
    ||| |||  ||| ||||| ||||||||||||||||    
T  36654 acatggaacgtggaatacgtttggtatgaacgtcc 36688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 2206 - 2303
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtatgaacgtccaac 144  Q
    ||||||| ||||||||||||| || ||  |||| ||||||||||| | ||||| |||||||||||||||||| || || || ||||| ||||||||||    
T  2206 acgttaagaggtctcaaggatgaaatgactgaattcaaccaaggagtcaaccccggagacacaaggagggtggaacacgttcggtataaacgtccaac 2303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 24844 - 24930
Alignment:
Q  47 acgttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtgaaatacatttggtat 133  Q
    ||||||| ||||||||||||| |||||| | || ||||||| ||| | ||||| |||||||||||||||||| ||||| || |||||    
T  24844 acgttaagaggtctcaaggatgaactggctaaattcaaccagggagtcaaccccggagacacaaggagggtggaatacgttcggtat 24930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 63917 - 63986
Alignment:
Q  49 gttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    ||||| ||| ||||||||| ||||| ||||| ||||| ||||| | |||||  |||||||||||||||||    
T  63917 gttaagaggcctcaaggatgaactgaatgaattcaacaaaggagtcaaccccagagacacaaggagggtg 63986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 1732 - 1800
Alignment:
Q  50 ttaaaaggtctcaaggattaactggatgaaatcaaccaaggactgaaccctggagacacaaggagggtg 118  Q
    |||| ||||||||||||| |||||  |||| ||| ||||| | | |||||| |||||||||||||||||    
T  1732 ttaagaggtctcaaggatgaactgactgaattcagccaagaagtcaaccctagagacacaaggagggtg 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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