View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19953_low_16 (Length: 335)

Name: NF19953_low_16
Description: NF19953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19953_low_16
NF19953_low_16
[»] chr8 (34 HSPs)
chr8 (79-318)||(8897836-8898077)
chr8 (214-318)||(7136601-7136705)
chr8 (226-318)||(28817698-28817790)
chr8 (214-318)||(36720755-36720859)
chr8 (214-318)||(25250481-25250585)
chr8 (214-318)||(39461068-39461172)
chr8 (214-318)||(44530108-44530212)
chr8 (221-318)||(6760788-6760885)
chr8 (214-318)||(12670322-12670424)
chr8 (214-318)||(29521757-29521861)
chr8 (214-298)||(30454187-30454271)
chr8 (214-310)||(35261638-35261734)
chr8 (215-298)||(20869588-20869671)
chr8 (214-300)||(2626478-2626564)
chr8 (221-299)||(17823542-17823620)
chr8 (221-299)||(28407382-28407460)
chr8 (226-318)||(13160673-13160764)
chr8 (231-318)||(22598133-22598220)
chr8 (231-312)||(44781584-44781665)
chr8 (226-318)||(20284143-20284237)
chr8 (221-299)||(18164850-18164928)
chr8 (226-300)||(21070792-21070866)
chr8 (228-318)||(45071238-45071327)
chr8 (230-318)||(26954107-26954196)
chr8 (226-282)||(24245422-24245478)
chr8 (234-318)||(35105902-35105986)
chr8 (231-318)||(42083771-42083858)
chr8 (226-300)||(12625860-12625934)
chr8 (234-312)||(30962851-30962929)
chr8 (261-312)||(5135367-5135418)
chr8 (259-318)||(8484010-8484069)
chr8 (237-299)||(31457155-31457217)
chr8 (232-312)||(24365137-24365218)
chr8 (247-310)||(389635-389700)
[»] chr7 (53 HSPs)
chr7 (214-318)||(46354153-46354257)
chr7 (221-318)||(19426961-19427058)
chr7 (214-318)||(47716418-47716522)
chr7 (214-319)||(2541090-2541196)
chr7 (214-312)||(42805483-42805581)
chr7 (226-318)||(11617660-11617752)
chr7 (221-310)||(27629600-27629689)
chr7 (214-318)||(42798628-42798732)
chr7 (226-318)||(43557443-43557535)
chr7 (214-312)||(7193044-7193142)
chr7 (214-310)||(8149025-8149122)
chr7 (214-318)||(21172081-21172183)
chr7 (214-298)||(48735212-48735297)
chr7 (214-298)||(32758220-32758304)
chr7 (214-298)||(47077945-47078029)
chr7 (230-309)||(7644931-7645010)
chr7 (216-318)||(10693145-10693245)
chr7 (226-300)||(7794596-7794670)
chr7 (214-312)||(18326993-18327090)
chr7 (229-299)||(33872000-33872070)
chr7 (214-299)||(42495926-42496011)
chr7 (231-312)||(29907393-29907476)
chr7 (214-312)||(14732900-14732998)
chr7 (226-318)||(22699042-22699134)
chr7 (215-283)||(35334921-35334989)
chr7 (221-308)||(1423992-1424079)
chr7 (226-309)||(5180238-5180321)
chr7 (231-318)||(14099078-14099165)
chr7 (231-318)||(14409095-14409182)
chr7 (231-318)||(19265791-19265877)
chr7 (256-318)||(7879639-7879701)
chr7 (256-318)||(16341279-16341341)
chr7 (256-318)||(18512525-18512586)
chr7 (215-317)||(40463837-40463938)
chr7 (231-312)||(5814447-5814528)
chr7 (221-310)||(12473270-12473359)
chr7 (214-283)||(28078238-28078307)
chr7 (244-308)||(38262278-38262342)
chr7 (231-318)||(19266426-19266513)
chr7 (231-318)||(23419746-23419833)
chr7 (214-318)||(2663007-2663107)
chr7 (237-318)||(42391172-42391251)
chr7 (231-308)||(48123566-48123643)
chr7 (230-298)||(13805077-13805145)
chr7 (232-299)||(6736867-6736934)
chr7 (231-318)||(28362217-28362304)
chr7 (256-299)||(32233225-32233268)
chr7 (227-298)||(42476845-42476916)
chr7 (256-298)||(31591199-31591241)
chr7 (226-312)||(34626286-34626371)
chr7 (256-318)||(35203440-35203502)
chr7 (234-318)||(11741774-11741856)
chr7 (231-299)||(44123712-44123780)
[»] chr5 (30 HSPs)
chr5 (214-318)||(24448849-24448953)
chr5 (208-318)||(4619178-4619288)
chr5 (214-318)||(38879540-38879644)
chr5 (214-312)||(23974740-23974837)
chr5 (214-318)||(41014278-41014381)
chr5 (214-318)||(43334161-43334266)
chr5 (214-312)||(35710272-35710368)
chr5 (214-300)||(1565390-1565476)
chr5 (209-318)||(27328706-27328815)
chr5 (226-318)||(37024628-37024718)
chr5 (215-318)||(8170056-8170157)
chr5 (221-312)||(12006408-12006499)
chr5 (221-300)||(22187251-22187330)
chr5 (231-310)||(39301099-39301178)
chr5 (227-312)||(22600426-22600511)
chr5 (209-298)||(22861758-22861847)
chr5 (256-312)||(22025544-22025600)
chr5 (238-309)||(1405170-1405241)
chr5 (231-318)||(28516506-28516593)
chr5 (231-281)||(39079875-39079925)
chr5 (231-312)||(209006-209086)
chr5 (246-318)||(32703415-32703485)
chr5 (239-299)||(1850624-1850684)
chr5 (227-283)||(17419886-17419942)
chr5 (258-318)||(43574609-43574669)
chr5 (247-310)||(42924914-42924977)
chr5 (264-318)||(13801841-13801895)
chr5 (235-312)||(10634224-10634301)
chr5 (265-318)||(19143015-19143067)
chr5 (259-312)||(41425952-41426005)
[»] chr3 (41 HSPs)
chr3 (214-318)||(40272884-40272988)
chr3 (214-312)||(13730682-13730780)
chr3 (214-310)||(8247769-8247865)
chr3 (214-318)||(46421109-46421213)
chr3 (214-311)||(12914114-12914211)
chr3 (214-318)||(13628864-13628969)
chr3 (214-317)||(10870025-10870127)
chr3 (214-318)||(29366794-29366898)
chr3 (232-318)||(34420716-34420802)
chr3 (214-295)||(52926305-52926386)
chr3 (226-318)||(4495736-4495828)
chr3 (214-317)||(9607184-9607287)
chr3 (231-318)||(26573125-26573212)
chr3 (214-299)||(5173811-5173897)
chr3 (246-312)||(54032637-54032703)
chr3 (214-318)||(1217071-1217173)
chr3 (214-318)||(7696959-7697061)
chr3 (226-318)||(26869700-26869791)
chr3 (214-298)||(39203497-39203581)
chr3 (256-312)||(45948916-45948972)
chr3 (241-312)||(516417-516488)
chr3 (256-318)||(54374418-54374480)
chr3 (231-312)||(53996644-53996725)
chr3 (214-318)||(16735422-16735525)
chr3 (214-318)||(22609748-22609850)
chr3 (231-318)||(45620900-45620988)
chr3 (235-310)||(30928227-30928302)
chr3 (214-318)||(22122989-22123091)
chr3 (231-307)||(53062036-53062112)
chr3 (236-318)||(7942993-7943075)
chr3 (230-308)||(26782363-26782441)
chr3 (246-312)||(45139556-45139622)
chr3 (261-318)||(10795497-10795554)
chr3 (265-318)||(14986989-14987042)
chr3 (226-318)||(6411894-6411985)
chr3 (214-312)||(12525391-12525486)
chr3 (215-300)||(25517261-25517348)
chr3 (235-318)||(39211992-39212075)
chr3 (260-318)||(29106576-29106634)
chr3 (231-305)||(35417914-35417988)
chr3 (232-300)||(25944468-25944536)
[»] chr2 (41 HSPs)
chr2 (214-318)||(14530277-14530381)
chr2 (214-318)||(8455388-8455492)
chr2 (224-318)||(17667971-17668065)
chr2 (214-318)||(10543657-10543761)
chr2 (214-318)||(12023991-12024094)
chr2 (222-318)||(17623531-17623627)
chr2 (226-318)||(24200697-24200789)
chr2 (226-318)||(17896230-17896323)
chr2 (226-318)||(23397737-23397827)
chr2 (214-318)||(11514395-11514499)
chr2 (214-300)||(25079808-25079894)
chr2 (221-318)||(7214500-7214597)
chr2 (230-312)||(40416949-40417031)
chr2 (233-310)||(5841006-5841083)
chr2 (214-310)||(19977794-19977890)
chr2 (214-298)||(21779351-21779435)
chr2 (227-299)||(44604826-44604898)
chr2 (233-300)||(5450263-5450330)
chr2 (231-318)||(33795261-33795348)
chr2 (229-300)||(39914396-39914467)
chr2 (226-312)||(17705466-17705552)
chr2 (214-318)||(22371016-22371117)
chr2 (231-309)||(29419970-29420048)
chr2 (214-318)||(25249810-25249913)
chr2 (221-299)||(24860077-24860155)
chr2 (231-312)||(21377151-21377232)
chr2 (244-312)||(14444718-14444785)
chr2 (235-295)||(17380331-17380391)
chr2 (230-318)||(32781360-32781448)
chr2 (231-318)||(23145770-23145857)
chr2 (231-318)||(23557560-23557647)
chr2 (214-318)||(9671139-9671242)
chr2 (226-318)||(26684692-26684786)
chr2 (246-318)||(10546153-10546226)
chr2 (246-318)||(19614983-19615055)
chr2 (215-295)||(27573581-27573661)
chr2 (231-312)||(44521451-44521532)
chr2 (232-316)||(45235891-45235976)
chr2 (232-292)||(99361-99421)
chr2 (214-309)||(14544022-14544118)
chr2 (233-309)||(31158522-31158598)
[»] chr4 (54 HSPs)
chr4 (215-318)||(21646924-21647027)
chr4 (216-318)||(16408675-16408777)
chr4 (214-318)||(5648218-5648321)
chr4 (214-318)||(20224943-20225045)
chr4 (214-318)||(48598897-48598999)
chr4 (214-318)||(6430698-6430801)
chr4 (214-312)||(10660363-10660461)
chr4 (214-312)||(10874508-10874606)
chr4 (214-298)||(5306755-5306839)
chr4 (214-318)||(16911521-16911625)
chr4 (230-318)||(19027823-19027911)
chr4 (226-310)||(37494822-37494906)
chr4 (214-300)||(30352681-30352767)
chr4 (214-299)||(17315389-17315474)
chr4 (226-318)||(47528602-47528692)
chr4 (214-310)||(14983793-14983889)
chr4 (214-318)||(30639339-30639442)
chr4 (238-318)||(41018866-41018945)
chr4 (231-318)||(487207-487294)
chr4 (214-312)||(14590796-14590895)
chr4 (228-299)||(40915802-40915873)
chr4 (228-318)||(44363204-44363294)
chr4 (221-298)||(11054238-11054315)
chr4 (231-312)||(35567146-35567227)
chr4 (231-312)||(42164227-42164307)
chr4 (231-312)||(43035224-43035305)
chr4 (238-310)||(7385556-7385628)
chr4 (235-318)||(17043466-17043549)
chr4 (241-300)||(25463108-25463167)
chr4 (231-317)||(54730225-54730312)
chr4 (231-310)||(54966997-54967076)
chr4 (256-318)||(47443958-47444020)
chr4 (214-310)||(23501752-23501842)
chr4 (226-318)||(13256473-13256561)
chr4 (233-312)||(32478864-32478942)
chr4 (270-312)||(9987912-9987954)
chr4 (236-298)||(39077886-39077948)
chr4 (221-294)||(8473716-8473789)
chr4 (233-302)||(30690271-30690340)
chr4 (234-299)||(49938681-49938746)
chr4 (230-318)||(25343162-25343250)
chr4 (233-308)||(7227710-7227785)
chr4 (233-318)||(9832385-9832468)
chr4 (272-318)||(20639731-20639777)
chr4 (214-283)||(5313101-5313170)
chr4 (231-312)||(39029139-39029220)
chr4 (231-300)||(54640429-54640498)
chr4 (246-318)||(7038044-7038115)
chr4 (226-266)||(20405064-20405104)
chr4 (233-305)||(23580293-23580365)
chr4 (221-297)||(30496413-30496489)
chr4 (256-300)||(30581557-30581601)
chr4 (235-318)||(54175043-54175126)
chr4 (226-266)||(55766590-55766630)
[»] chr1 (51 HSPs)
chr1 (226-312)||(46991798-46991884)
chr1 (215-318)||(30395800-30395903)
chr1 (228-312)||(6925096-6925180)
chr1 (214-318)||(18944625-18944729)
chr1 (214-318)||(41319878-41319982)
chr1 (231-312)||(18724623-18724704)
chr1 (214-318)||(34725170-34725272)
chr1 (226-318)||(20004164-20004256)
chr1 (226-318)||(23768392-23768484)
chr1 (214-318)||(32632629-32632732)
chr1 (214-318)||(46248025-46248129)
chr1 (234-312)||(22327101-22327179)
chr1 (214-299)||(22930158-22930243)
chr1 (226-318)||(8197037-8197129)
chr1 (214-310)||(14617020-14617116)
chr1 (230-318)||(27201645-27201733)
chr1 (231-318)||(2435859-2435946)
chr1 (231-302)||(2435981-2436052)
chr1 (230-297)||(20036218-20036285)
chr1 (230-312)||(15511229-15511311)
chr1 (232-310)||(25468343-25468421)
chr1 (232-318)||(44485181-44485267)
chr1 (221-283)||(47214500-47214562)
chr1 (214-310)||(10668202-10668303)
chr1 (209-311)||(25290140-25290244)
chr1 (231-312)||(35117846-35117927)
chr1 (214-318)||(38478354-38478456)
chr1 (214-299)||(45402077-45402161)
chr1 (231-318)||(17470418-17470505)
chr1 (221-318)||(19932827-19932921)
chr1 (221-299)||(33222973-33223051)
chr1 (229-318)||(4430098-4430187)
chr1 (226-299)||(27474275-27474348)
chr1 (214-283)||(34714605-34714674)
chr1 (234-310)||(9939463-9939539)
chr1 (214-298)||(45812627-45812711)
chr1 (231-317)||(11596512-11596597)
chr1 (214-276)||(40424724-40424786)
chr1 (231-317)||(50760299-50760385)
chr1 (215-318)||(12126909-12127010)
chr1 (256-312)||(35005147-35005203)
chr1 (256-299)||(31272465-31272508)
chr1 (214-268)||(18742083-18742137)
chr1 (230-283)||(6983916-6983969)
chr1 (230-295)||(25554817-25554882)
chr1 (221-310)||(27136732-27136820)
chr1 (230-298)||(19414437-19414505)
chr1 (232-300)||(19701570-19701638)
chr1 (270-310)||(24564382-24564422)
chr1 (270-318)||(39215031-39215079)
chr1 (256-312)||(45264478-45264534)
[»] chr6 (23 HSPs)
chr6 (214-318)||(8409202-8409306)
chr6 (221-318)||(12221989-12222086)
chr6 (214-318)||(1346923-1347025)
chr6 (214-318)||(29355929-29356034)
chr6 (214-318)||(1354829-1354931)
chr6 (226-318)||(1941826-1941918)
chr6 (226-298)||(2166504-2166576)
chr6 (226-298)||(2178137-2178209)
chr6 (214-307)||(3815160-3815253)
chr6 (231-312)||(13905057-13905138)
chr6 (215-300)||(14975170-14975255)
chr6 (226-312)||(14553483-14553568)
chr6 (231-299)||(9161099-9161167)
chr6 (214-318)||(20400626-20400730)
chr6 (226-318)||(6024204-6024296)
chr6 (214-317)||(15866110-15866213)
chr6 (247-310)||(17432332-17432395)
chr6 (221-312)||(24097547-24097638)
chr6 (221-300)||(24734599-24734678)
chr6 (232-309)||(32728237-32728314)
chr6 (231-318)||(7947444-7947531)
chr6 (260-311)||(33138838-33138889)
chr6 (233-298)||(28007604-28007671)
[»] scaffold0057 (2 HSPs)
scaffold0057 (221-310)||(46797-46886)
scaffold0057 (214-318)||(24844-24943)
[»] scaffold0254 (1 HSPs)
scaffold0254 (226-298)||(4128-4200)
[»] scaffold0187 (2 HSPs)
scaffold0187 (226-298)||(10140-10212)
scaffold0187 (226-298)||(20468-20540)
[»] scaffold0168 (1 HSPs)
scaffold0168 (214-298)||(30538-30622)
[»] scaffold0311 (1 HSPs)
scaffold0311 (226-312)||(10781-10867)
[»] scaffold0049 (1 HSPs)
scaffold0049 (213-318)||(58935-59040)
[»] scaffold0005 (1 HSPs)
scaffold0005 (214-312)||(226483-226582)
[»] scaffold0223 (1 HSPs)
scaffold0223 (216-298)||(11093-11174)
[»] scaffold0258 (1 HSPs)
scaffold0258 (214-299)||(13114-13199)
[»] scaffold1176 (1 HSPs)
scaffold1176 (230-298)||(1677-1745)
[»] scaffold0116 (1 HSPs)
scaffold0116 (229-299)||(8865-8935)
[»] scaffold0024 (1 HSPs)
scaffold0024 (214-284)||(83834-83904)
[»] scaffold0194 (1 HSPs)
scaffold0194 (214-283)||(24623-24692)
[»] scaffold0031 (1 HSPs)
scaffold0031 (226-299)||(43100-43173)
[»] scaffold0167 (1 HSPs)
scaffold0167 (262-318)||(23606-23662)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 79 - 318
Target Start/End: Complemental strand, 8898077 - 8897836
Alignment:
Q  79 tcgctcctagtcttctatatctaggtaaaagctgattacaaagtgatttggtctaaaagataattgtgagagcttcaatatggttt--attagagcaacc 176  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8898077 tcgctcctagtcttctatatctaggcaaaagctgattacgaagtgatttggtctaaaagataattgtgagagcttcaatatggtttttattagagcaacc 8897978  T
Q  177 taattatggtaaatatagctaagcttttaaaagaagagtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcct 276  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8897977 taattatggtaaatatagctaagtttttaaaagaagagtaaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcct 8897878  T
Q  277 ggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8897877 ggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 8897836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 7136705 - 7136601
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||  |||||||||||     
T  7136705 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctg 7136606  T
Q  314 cgtac 318  Q
    |||||    
T  7136605 cgtac 7136601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 28817790 - 28817698
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||| |||||    
T  28817790 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 28817698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 36720755 - 36720859
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| ||||  |||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||     
T  36720755 gtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 36720854  T
Q  314 cgtac 318  Q
    |||||    
T  36720855 cgtac 36720859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 25250481 - 25250585
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||||||||||||||||||||||| ||||||| | ||||||||  ||| |||||||||||||| ||  ||||||||||||||||||| ||||     
T  25250481 gtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctg 25250580  T
Q  314 cgtac 318  Q
    |||||    
T  25250581 cgtac 25250585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 39461172 - 39461068
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||| ||| | ||||||||||||| |||||||||||||| || ||||||||||||| || ||||||||     
T  39461172 gtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctg 39461073  T
Q  314 cgtac 318  Q
    |||||    
T  39461072 cgtac 39461068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 44530108 - 44530212
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||| ||| |||||||   ||||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||     
T  44530108 gtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctg 44530207  T
Q  314 cgtac 318  Q
    |||||    
T  44530208 cgtac 44530212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 6760788 - 6760885
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||||||||||||||||| || ||||   ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||| |||||    
T  6760788 tggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtac 6760885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 12670424 - 12670322
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| |||||||||||     
T  12670424 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctg 12670327  T
Q  314 cgtac 318  Q
    |||||    
T  12670326 cgtac 12670322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 29521861 - 29521757
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| |||||| ||||||||||||  |||||| | ||||||||||||| |||||||||||||| || ||||| ||||||| |||||||||||     
T  29521861 gtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctg 29521762  T
Q  314 cgtac 318  Q
    |||||    
T  29521761 cgtac 29521757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 30454271 - 30454187
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||    
T  30454271 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 30454187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 35261638 - 35261734
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||| ||||||||||  | ||||||||||||| |||||||||    
T  35261638 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaagg 35261734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 20869671 - 20869588
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||    
T  20869671 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 300
Target Start/End: Original strand, 2626478 - 2626564
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||| |||| ||| ||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||||    
T  2626478 gtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa 2626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 17823542 - 17823620
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||    
T  17823542 tggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 17823620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 28407382 - 28407460
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||    
T  28407382 tggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 28407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 13160673 - 13160764
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||||||| |||||| || ||||||| ||||| ||||||||||| |||||    
T  13160673 caactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaaacagggtaaggctgcgtac 13160764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 22598133 - 22598220
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| |  |||| | ||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||| ||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtac 22598220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 44781665 - 44781584
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| | ||||| | ||| ||||||||| ||||||||||||||||| ||||||||||| | |||||||||||    
T  44781665 ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggct 44781584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 20284237 - 20284143
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt--aaaaaatagggtaaggctacgtac 318  Q
    |||| |||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||| |  |||||| ||||||||||| |||||    
T  20284237 caacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtac 20284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 18164928 - 18164850
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||| |||| ||| |||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||    
T  18164928 tggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 18164850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 21070866 - 21070792
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||| |||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||| |||||||    
T  21070866 caacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaa 21070792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 45071238 - 45071327
Alignment:
Q  228 actggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||| ||||||  | ||||||||||||| |||| ||||||||| || ||||||| ||||| ||||||||||| |||||    
T  45071238 actggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtac 45071327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 26954107 - 26954196
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||| ||||||    ||||||||||||| |||||||||||||| || ||||||| |||||| ||||||||||| |||||    
T  26954107 tggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtac 26954196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 24245422 - 24245478
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaac 282  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||    
T  24245422 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 35105902 - 35105986
Alignment:
Q  234 aaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||| | ||| | | ||||||||||||| ||||||||||||||||| ||||||||||| | || |||||||| |||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtac 35105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 42083858 - 42083771
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||| ||||||| | ||||| | ||||||||||||| |||||||||||||| ||  ||||||||||||| ||| |||||| |||||    
T  42083858 ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtac 42083771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 12625860 - 12625934
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||||||||||||||||  ||||||    |||||||||| | ||||||||||||||||| |||||||||||||    
T  12625860 caactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaa 12625934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 30962929 - 30962851
Alignment:
Q  234 aaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||| ||||||  | |||||||||  || |||||||||||||| || ||||||||||||||||||| |||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggct 30962851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 5135418 - 5135367
Alignment:
Q  261 cacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggct 5135367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 8484069 - 8484010
Alignment:
Q  259 gtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| |||| |||||| |||||    
T  8484069 gtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtac 8484010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 31457155 - 31457217
Alignment:
Q  237 gttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||| ||||| | | ||||||||||||| |||||||| |||||||| ||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaa 31457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 24365218 - 24365137
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaat-agggtaaggct 312  Q
    ||||||||||||| |||||||   || |||||||||| ||| ||| |||||| || |||||||||||||| |||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggct 24365137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 389635 - 389700
Alignment:
Q  247 tgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt--aaaaaatagggtaagg 310  Q
    |||| ||| ||||||||||||| |||||||||||||| || |||||||  |||||| |||||||||    
T  389635 tgtgtcagaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaagg 389700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 46354153 - 46354257
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||  | ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||     
T  46354153 gtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctg 46354252  T
Q  314 cgtac 318  Q
    |||||    
T  46354253 cgtac 46354257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 19427058 - 19426961
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||||||||||||| || |||||    
T  19427058 tggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtac 19426961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 47716418 - 47716522
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||||||||||| ||||||||||  ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||     
T  47716418 gtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 47716517  T
Q  314 cgtac 318  Q
    |||||    
T  47716518 cgtac 47716522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 2541196 - 2541090
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaa-ggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | || ||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  2541196 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 2541097  T
Q  313 acgtact 319  Q
     ||||||    
T  2541096 gcgtact 2541090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 42805483 - 42805581
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| ||||  |||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  42805483 gtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 42805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 11617752 - 11617660
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | |||||||| |||| ||||||||||||||||| ||||||||||||| |||||||| || |||||    
T  11617752 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtac 11617660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 27629600 - 27629689
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||| ||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||    
T  27629600 tggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagg 27629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 42798628 - 42798732
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||||| ||||||||  | ||||||||||||| | |||||||||     
T  42798628 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctg 42798727  T
Q  314 cgtac 318  Q
    |||||    
T  42798728 cgtac 42798732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 43557443 - 43557535
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||| |||||||||||||| || ||||||||||||| || |||||||| |||||    
T  43557443 caactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtac 43557535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 7193044 - 7193142
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| ||||  |||| ||||||||||||| ||||||| | ||||||||||||| ||||||| ||||||||| |||||||||| |||| |||||||||    
T  7193044 gtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaaggct 7193142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 310
Target Start/End: Complemental strand, 8149122 - 8149025
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtg-taaaaaatagggtaagg 310  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||| |||||| ||| |||||||| |||| ||| |||||| |||||||||||||||||    
T  8149122 gtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaagg 8149025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 21172183 - 21172081
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| |||| || | ||||||||||||| |||||||||||||| || |||||||  |||| |||||||||||     
T  21172183 gtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctg 21172086  T
Q  314 cgtac 318  Q
    |||||    
T  21172085 cgtac 21172081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 48735297 - 48735212
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcc-tggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||| ||||||||||| |||||||||||    
T  48735297 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa 48735212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 32758220 - 32758304
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || |||||||||||    
T  32758220 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 32758304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 47078029 - 47077945
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||  | |||||||||||    
T  47078029 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 309
Target Start/End: Original strand, 7644931 - 7645010
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaag 309  Q
    ||||||| ||||||||| ||||| | ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 7645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 10693245 - 10693145
Alignment:
Q  216 aaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacg 315  Q
    |||| |||| ||||| ||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| ||||||||||| ||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaagagggtaaggctgcg 10693148  T
Q  316 tac 318  Q
    |||    
T  10693147 tac 10693145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 7794670 - 7794596
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||| |||||||||    
T  7794670 caactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaa 7794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 18326993 - 18327090
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||| || ||||||| ||||| |||||||||||    
T  18326993 gtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgt-aaaaacagggtaaggct 18327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 33872070 - 33872000
Alignment:
Q  229 ctggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||||||||||| ||||||| | |||||| |||||| ||||||||||||||||| ||||||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaa 33872000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 42496011 - 42495926
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| |||| ||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||| || ||||| ||||||    
T  42496011 gtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 42495926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 29907393 - 29907476
Alignment:
Q  231 ggtaaagttgttgta--atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||||  ||||||| | ||||||||||||| ||||||| |||||| || |||||||||||||||| ||||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggct 29907476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 14732998 - 14732900
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | || |||| ||||| |||||||||||||| || |   ||||||||| |||||||||||    
T  14732998 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggct 14732900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 22699134 - 22699042
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||| | ||||| |||||||||||| |  | ||||||||||||| |||||||| || |||||    
T  22699134 caactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtac 22699042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 35334989 - 35334921
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    ||||| |||| ||||||||||||||||||| ||||||| | ||||||||| ||| ||||||||||||||    
T  35334989 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca 35334921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 1424079 - 1423992
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| || || |||||||||||  |  |||||||||||| |||||||    
T  1424079 tggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaaacagggtaa 1423992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 5180321 - 5180238
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaag 309  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||| || | ||||||||| || ||||||| ||||| ||||||||    
T  5180321 caactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaag 5180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 14099165 - 14099078
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| ||||||| | ||||||| |||||||||||||||||| | ||  |||||||||||| ||| |||| || |||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtac 14099078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 14409182 - 14409095
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| ||||||| | ||||||| |||||||||||||||||| | ||  |||||||||||| ||| |||| || |||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtac 14409095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 19265791 - 19265877
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||||| | ||||||||||||| ||||| |||| ||| |||||||||| ||||| ||||||||||| |||||    
T  19265791 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgt-aaaaagagggtaaggctgcgtac 19265877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 7879639 - 7879701
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||| | ||||||||| |||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtac 7879701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 16341279 - 16341341
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| |||| || |||||| || ||||||||||||| |||||||||||||||||    
T  16341279 aaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtac 16341341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 18512586 - 18512525
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||| |||||    
T  18512586 aaggtcacgggttcaagtcctggaaacaacatcttgtgta-aaaatagggtaaggctgcgtac 18512525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 40463837 - 40463938
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 314  Q
    ||||| |||| |||| |||||||||||||| ||||||| | ||||||||||||| ||||| | ||||||  | |||||||||||| | |||||||||| |    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaact-gggtaaggctgc 40463935  T
Q  315 gta 317  Q
    |||    
T  40463936 gta 40463938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 5814447 - 5814528
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| ||||||  | || |||||||||| ||||  |||||| |||| ||| |||||||||||||||||||||    
T  5814447 ggtaaagttgttgttatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 5814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 12473270 - 12473359
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||| |||| |||||||||||||| ||||  | | ||||||| ||||| |||||||| |||||||| ||||||| ||||| |||||||||    
T  12473270 tggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaagg 12473359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 28078307 - 28078238
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    ||||||||||| ||||| || |||||||||| ||||||| | ||||||||||||| ||||||| ||||||    
T  28078307 gtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 28078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 38262342 - 38262278
Alignment:
Q  244 taatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    ||||||||| | ||||||||||||| ||||||||||||||  | ||||||||||||||| |||||    
T  38262342 taatgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaa 38262278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 19266426 - 19266513
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| ||||||| | ||||||  ||||| |||||||| ||| | || |||| |||||||| ||||||||||| |||||    
T  19266426 ggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtac 19266513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 23419833 - 23419746
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||| ||| |||||||   |||||||| |||| |||| ||||||||| || ||||||||||||| |||||||| || |||||    
T  23419833 ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtac 23419746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 2663107 - 2663007
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||| ||||||||||||| ||||||| | |  ||||  |||| |||||||||||||| || |||||||  ||||||||||||||||     
T  2663107 gtaaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggctg 2663012  T
Q  314 cgtac 318  Q
    |||||    
T  2663011 cgtac 2663007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 42391251 - 42391172
Alignment:
Q  237 gttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||| |  |||||||  |||| ||||||||||| |||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgt--aaaacagggtaaggctgcgtac 42391172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 48123643 - 48123566
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    |||||||||||| | ||||| | | ||||||| ||||| |||||||||||||| || |||||||||| || |||||||    
T  48123643 ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaa 48123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 13805077 - 13805145
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||||||||| ||||||| | ||||| ||||||| |||||||||||| | || || ||||||||    
T  13805077 tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaa 13805145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 6736867 - 6736934
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    ||||||||||||| ||| ||| | ||||||||||||| |||||||  |||||||| ||||| ||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaa 6736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 28362304 - 28362217
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| ||||| | | |||||||| |||| ||||||| |||||  || |||||||||||||   ||||||||| |||||    
T  28362304 ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtac 28362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 32233268 - 32233225
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||    
T  32233268 aaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaa 32233225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 42476845 - 42476916
Alignment:
Q  227 aactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||||||||||||||| |||||||   |||||||||| || |||| |||||||||  | |||||||||||    
T  42476845 aactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa 42476916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 31591241 - 31591199
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||    
T  31591241 aaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaa 31591199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 34626371 - 34626286
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||||| ||||||  | |||| ||| | || |||||||||||||| || | ||||| ||||| |||||||||||    
T  34626371 caactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgt-aaaaacagggtaaggct 34626286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 35203440 - 35203502
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| ||||||||||||||  | ||||||||||||| ||| |||| || |||||    
T  35203440 aaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtac 35203502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 11741774 - 11741856
Alignment:
Q  234 aaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||| ||||||| | ||||||| ||||| |||||||| ||||| |  || ||||  |||||||||||||||| |||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgt--aaaatagggtaaggctgcgtac 11741856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 44123780 - 44123712
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||||| ||| ||||||| | ||| | ||||||| |||| ||||||||| || ||||||||||||    
T  44123780 ggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaa 44123712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 24448849 - 24448953
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||||     
T  24448849 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctg 24448948  T
Q  314 cgtac 318  Q
    |||||    
T  24448949 cgtac 24448953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 4619288 - 4619178
Alignment:
Q  208 agaagagtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggta 307  Q
    ||||| |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||| | || ||||||||||||| ||||||    
T  4619288 agaagggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggta 4619189  T
Q  308 aggctacgtac 318  Q
    ||||| |||||    
T  4619188 aggctgcgtac 4619178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 38879540 - 38879644
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||| ||||||| |||||||||||     
T  38879540 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctg 38879639  T
Q  314 cgtac 318  Q
    |||||    
T  38879640 cgtac 38879644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 23974740 - 23974837
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| |||| |||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  23974740 gtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggct 23974837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 41014278 - 41014381
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||| ||||| |||||||||||     
T  41014278 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctg 41014376  T
Q  314 cgtac 318  Q
    |||||    
T  41014377 cgtac 41014381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 43334161 - 43334266
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || | ||||| |||||| |||||||||||    
T  43334161 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggct 43334260  T
Q  313 acgtac 318  Q
     |||||    
T  43334261 gcgtac 43334266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 35710272 - 35710368
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| |||| || | ||||||||||||| |||||||||||||| || |||||||  ||||||||||||||||    
T  35710272 gtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggct 35710368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 300
Target Start/End: Original strand, 1565390 - 1565476
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||| |||||| ||||||||||||||||| |||| ||||||||    
T  1565390 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaa 1565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 27328706 - 27328815
Alignment:
Q  209 gaagagtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    |||| |||||| || | ||| ||||||||||||||| ||||||| | |||||||| |||| ||||||||||||||  | ||||||||||||| |||||||    
T  27328706 gaagggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaa 27328805  T
Q  309 ggctacgtac 318  Q
    |||| |||||    
T  27328806 ggctgcgtac 27328815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 37024718 - 37024628
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| ||||||||||| |||||    
T  37024718 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtac 37024628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 8170157 - 8170056
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 314  Q
    ||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| ||  ||||||  |||| ||||||||||| |    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgt--aaaacagggtaaggctgc 8170060  T
Q  315 gtac 318  Q
    ||||    
T  8170059 gtac 8170056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 312
Target Start/End: Complemental strand, 12006499 - 12006408
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacggg-ttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||| |||||| | |||||||||| ||||||| | ||||||||||| || ||||| ||||||||||| ||| |||||||||||||||||||||    
T  12006499 tggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggct 12006408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 22187251 - 22187330
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||| ||||| ||||||||||||| || |||| | |||||||| |||| |||||||||||||| || |||||||||||||    
T  22187251 tggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaa 22187330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 39301099 - 39301178
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||||||||||| |||| || | ||||||||||||| ||||| ||| ||||||| |||||||| |||| |||||||||    
T  39301099 ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagg 39301178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 22600426 - 22600511
Alignment:
Q  227 aactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||||| | ||||||| | ||||| ||||||| |||||||||||||||    |||||||||| | |||||||||||    
T  22600426 aactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggct 22600511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 22861847 - 22861758
Alignment:
Q  209 gaagagtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||| |||||| ||||||||||| |||||||||||| ||||||| | |||||||||| || ||||||| ||| ||  | |||||||||||    
T  22861847 gaagggtaaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 22025544 - 22025600
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  22025544 aaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 22025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 1405170 - 1405241
Alignment:
Q  238 ttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaag 309  Q
    ||||||| |||||||   ||||||||||||| ||||||||||||||||| ||| | |||||||||| |||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaag 1405241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 28516593 - 28516506
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||| | | ||||||||||||| ||||| |||||||| || ||||||||||||| ||| || |||| |||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtac 28516506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 39079925 - 39079875
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaa 281  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||| ||||||    
T  39079925 ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 209086 - 209006
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| |||||||   ||||||||  ||| ||||||||| ||||||| |||||||| |||| |||||||||||    
T  209086 ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgta-aaaacagggtaaggct 209006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 32703415 - 32703485
Alignment:
Q  246 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| ||||||||||| |||||    
T  32703415 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtac 32703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 1850624 - 1850684
Alignment:
Q  239 tgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| ||||||| | ||||||||||||| |||||| ||||| |||| ||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaa 1850684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 17419886 - 17419942
Alignment:
Q  227 aactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    |||||||||| ||||||||||||||| | ||||| ||| ||| ||||||||||||||    
T  17419886 aactggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtcctggaaaca 17419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 43574609 - 43574669
Alignment:
Q  258 ggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| ||| ||||||||||||||| | |||||||| |||| ||||||||||| |||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtac 43574669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 42924977 - 42924914
Alignment:
Q  247 tgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| | ||||||||| ||| |||||||| |||||||  ||||||||||||| |||||||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaagg 42924914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 13801895 - 13801841
Alignment:
Q  264 gggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||| ||||||||||| || || ||||||||||||| ||||||||||| |||||    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtac 13801841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 10634301 - 10634224
Alignment:
Q  235 aagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||| | ||||| | ||||||| ||||| ||||||| ||||||||| | |||| |||||  |||||||||||    
T  10634301 aagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctcgtgtgcaaaaatcagggtaaggct 10634224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 19143067 - 19143015
Alignment:
Q  265 ggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  19143067 ggttcaagtcctggaaacaacctcttgtgta-aaaacagggtaaggctgcgtac 19143015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 41425952 - 41426005
Alignment:
Q  259 gtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||| |||| |||||||||||   |||||||||||| |||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggct 41426005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 40272988 - 40272884
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||     
T  40272988 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctg 40272889  T
Q  314 cgtac 318  Q
    |||||    
T  40272888 cgtac 40272884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 13730780 - 13730682
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  13730780 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 13730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 310
Target Start/End: Complemental strand, 8247865 - 8247769
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||    
T  8247865 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagg 8247769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 46421213 - 46421109
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| |||||||   ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||     
T  46421213 gtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 46421114  T
Q  314 cgtac 318  Q
    |||||    
T  46421113 cgtac 46421109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 311
Target Start/End: Complemental strand, 12914211 - 12914114
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggc 311  Q
    |||||| |||| ||||||||||||||||||||||||||| | ||||||||  ||| |||||||||||||| || ||||||||||||| ||||||||||    
T  12914211 gtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggc 12914114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 13628969 - 13628864
Alignment:
Q  214 gtaaccctggcacaactggtaaa-gttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||||||||||||||| |||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||| ||| |||||||||||    
T  13628969 gtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggct 13628870  T
Q  313 acgtac 318  Q
     |||||    
T  13628869 gcgtac 13628864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 10870127 - 10870025
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||| |||| |||||||||||     
T  10870127 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggctg 10870029  T
Q  314 cgta 317  Q
    ||||    
T  10870028 cgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 29366898 - 29366794
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| ||||  |||||||||||||||||| |||||||   ||||||||||||| |||||||||||||| || ||||| ||||||| |||||||||||     
T  29366898 gtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctg 29366799  T
Q  314 cgtac 318  Q
    |||||    
T  29366798 cgtac 29366794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 34420802 - 34420716
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| | ||||| | ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||| |||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 34420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 52926386 - 52926305
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgta 295  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||    
T  52926386 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 4495828 - 4495736
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||| ||| | ||  |||||||||||| ||||||||||| |||||    
T  4495828 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtac 4495736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 9607184 - 9607287
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||| ||||||||||||| ||||||| | |||||||  |||| |||||||||||||| || |||| |||||||| |||||||||||     
T  9607184 gtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctg 9607283  T
Q  314 cgta 317  Q
    ||||    
T  9607284 cgta 9607287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 26573125 - 26573212
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||||| | ||||||||||||| |||||||||||||| || | ||||||||||| ||||||||||| |||||    
T  26573125 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtac 26573212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 5173897 - 5173811
Alignment:
Q  214 gtaaccctggcacaactggtaaa-gttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| |||| ||||| ||||| |||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||    
T  5173897 gtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 5173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 54032703 - 54032637
Alignment:
Q  246 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  54032703 atgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 54032637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 1217071 - 1217173
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| |||||||||||||||| || |||| || | ||||||||||||| |||||||||||||| || |||||||  |||| |||||||||||     
T  1217071 gtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctg 1217168  T
Q  314 cgtac 318  Q
    |||||    
T  1217169 cgtac 1217173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 7697061 - 7696959
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| |||||||   ||||||||||||| ||||||||||||||  | |||||||  |||| |||||||||||     
T  7697061 gtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggctg 7696964  T
Q  314 cgtac 318  Q
    |||||    
T  7696963 cgtac 7696959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 26869700 - 26869791
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || || |||| ||||| ||||||||||| |||||    
T  26869700 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggctgcgtac 26869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 39203497 - 39203581
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||||||||| ||||||||||||| ||||||| | |||||||| |||| ||||||| |||||| || |||||||||||    
T  39203497 gtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa 39203581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 45948972 - 45948916
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  45948972 aaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggct 45948916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 516417 - 516488
Alignment:
Q  241 ttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 516488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 54374480 - 54374418
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  54374480 aaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtac 54374418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 53996725 - 53996644
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| ||||||| || |||| | ||||||||| ||| ||||| ||||||||||| ||||||||||||| |||||||||||    
T  53996725 ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggct 53996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 16735422 - 16735525
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | || |||||||||| ||||||| |||||| || |||||   ||||| |||||||||||     
T  16735422 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgt-agaaaaacagggtaaggctg 16735520  T
Q  314 cgtac 318  Q
    |||||    
T  16735521 cgtac 16735525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 22609748 - 22609850
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| |||| |||||||||||||| ||||||| | ||||| ||||||| ||||| |||||||| || ||||||| ||||| |||||||||||     
T  22609748 gtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgt-aaaaacagggtaaggctg 22609845  T
Q  314 cgtac 318  Q
    |||||    
T  22609846 cgtac 22609850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 45620988 - 45620900
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaa-aaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||||| | ||||||||||||| |||| ||||||||| || ||||||||| |||| ||||||||||| |||||    
T  45620988 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtac 45620900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 30928302 - 30928227
Alignment:
Q  235 aagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||| |||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| | |||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaagg 30928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 22123091 - 22122989
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| | ||||||||| ||||||| ||||||| | |||||| |||||| ||||||||||||||  | |||||||  |||| |||||||||||     
T  22123091 gtaaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggctg 22122994  T
Q  314 cgtac 318  Q
    |||||    
T  22122993 cgtac 22122989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 53062036 - 53062112
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggta 307  Q
    |||||||||||||| ||||||| | ||||||||| ||| |||||||||||||| || | ||||| ||||| ||||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 7942993 - 7943075
Alignment:
Q  236 agttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||| ||||||| | |||||||||| || |||||||||||||| |  ||||| ||||||| |||||||| || |||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtac 7943075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 26782363 - 26782441
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    |||||||||| |||| ||| ||  | |||||||||| || ||||||| ||||||| | |||||||||||||||||||||    
T  26782363 tggtaaagttattgtcatgcgattgaaaggtcacggattcaagtccttgaaacaatctcttgtgtaaaaaatagggtaa 26782441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 45139622 - 45139556
Alignment:
Q  246 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||| | ||||||||||||| ||||  ||||||||||| ||||||||||| | |||||||||||    
T  45139622 atgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggct 45139556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 10795554 - 10795497
Alignment:
Q  261 cacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||| |||||||||||||| || ||||||||||| | ||||||||||| |||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtac 10795497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 14986989 - 14987042
Alignment:
Q  265 ggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| |||||||||||||| || ||||||||||||| ||||||||||| |||||    
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 14987042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 6411985 - 6411894
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| |||| || |  |||||| ||||| ||||| || ||||| || |||||||| |||| ||||||||||| |||||    
T  6411985 caactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgta-aaaacagggtaaggctgcgtac 6411894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 12525391 - 12525486
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||  ||   |||| | |||||||| ||||  ||||||||||||| || ||||||||||||  |||||||||||    
T  12525391 gtaaccttggcgcaactggtaaagttgtcata---tgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 25517348 - 25517261
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttga--agtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    ||||| |||| ||||||||||||||||||| ||||||| | |||||||| || |||   | |||||||||| || |||||||||||||    
T  25517348 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggatgatgggacctggaaacatcctcttgtgtaaaaaa 25517261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 39211992 - 39212075
Alignment:
Q  235 aagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| || ||||||| | || |||||||||| |||||||||||| |||| |||||||||| || | |||||| || |||||    
T  39211992 aagttgtcgttatgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtac 39212075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 29106576 - 29106634
Alignment:
Q  260 tcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||  ||||| || |||||||| ||||||||||||||||| ||||| |||||||    
T  29106576 tcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataaggttacgtac 29106634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 35417914 - 35417988
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaataggg 305  Q
    |||||||||||| | ||||||| |  |||||||| ||| || ||||||||||| || ||||||||||||| ||||    
T  35417914 ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 25944468 - 25944536
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    ||||||||||||| | ||||| | ||||||| ||||| |||||||||||||  || || ||||||||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaa 25944536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 14530277 - 14530381
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||| ||||||| ||||||||||||    
T  14530277 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggcta 14530376  T
Q  314 cgtac 318  Q
    |||||    
T  14530377 cgtac 14530381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 8455492 - 8455388
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||| | |||||||||||     
T  8455492 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctg 8455393  T
Q  314 cgtac 318  Q
    |||||    
T  8455392 cgtac 8455388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 17667971 - 17668065
Alignment:
Q  224 cacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||| |||| ||||||||||||  ||||||||||| |||||    
T  17667971 cacaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtac 17668065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 10543657 - 10543761
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| |||||| |||||||||||| ||||||| | ||||||||||||| |||||||||||||  || ||||||||||||| |||||||||||     
T  10543657 gtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctg 10543756  T
Q  314 cgtac 318  Q
    |||||    
T  10543757 cgtac 10543761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 12024094 - 12023991
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||| |||| |||||||||||     
T  12024094 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggctg 12023996  T
Q  314 cgtac 318  Q
    |||||    
T  12023995 cgtac 12023991  T

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Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 17623531 - 17623627
Alignment:
Q  222 ggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||||||| ||| ||| | ||||||||||||| ||||||| ||||||||| ||||||||||||  ||||||||||| |||||    
T  17623531 ggcacaactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtac 17623627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 24200789 - 24200697
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | || |||||||||| |||||||||||||| || ||||||||||||| ||||||||||| |||||    
T  24200789 caactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 24200697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 17896230 - 17896323
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | |||||||||| || ||||||| ||||||||| ||||||| |||||||||||||||||| |||||    
T  17896230 caactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtac 17896323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 23397737 - 23397827
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||| |||||||||||||| || |||||||  ||||||||||||||||||||||    
T  23397737 caactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggctacgtac 23397827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 11514395 - 11514499
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| || ||||||||||| || ||||||||||||| |  ||||||||     
T  11514395 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctg 11514494  T
Q  314 cgtac 318  Q
    |||||    
T  11514495 cgtac 11514499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 25079894 - 25079808
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||||| | ||||||||| |||||||||||||    
T  25079894 gtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaa 25079808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 7214500 - 7214597
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||||||||||||| ||||||| | ||||||| ||||| ||||| ||||||||  | ||||||||||| | ||||||||||| |||||    
T  7214500 tggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtac 7214597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 40417031 - 40416949
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||| ||||||| | ||||||||||||| ||||| ||||||||||| ||||| ||||||| |||| ||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggct 40416949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 5841006 - 5841083
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||| |||||| ||  ||||||||||||||||||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaagg 5841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 310
Target Start/End: Complemental strand, 19977890 - 19977794
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| ||||  ||||||| |||||||||| ||||||| | ||||||||||||| |||| ||||||||| || ||| ||||||||||||| |||||    
T  19977890 gtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataagg 19977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 21779435 - 21779351
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| |||||||| |||||||||| ||||||| | ||||||||||||| |||||||||| ||| || |||||||||||    
T  21779435 gtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa 21779351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 44604826 - 44604898
Alignment:
Q  227 aactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    ||||| |||||||||||| ||||||| | |||||||| |||| ||||||||||||||||| ||||||||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 44604898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 5450263 - 5450330
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||||||||| ||||||| | ||||||||||||| || |||||||||||||| |||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaa 5450330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 33795261 - 33795348
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||||  | ||||||||||||| |||||| |||||||||| |||| |||||||| ||||||||||| |||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtac 33795348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 39914467 - 39914396
Alignment:
Q  229 ctggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||||||||||||| ||||||| | ||||||||||| | |||| |||||||||||| |||||||||||||    
T  39914467 ctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaa 39914396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 17705466 - 17705552
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||||| |||||||   ||||||||||||| |||||||||||||  || |||||||||| || || ||||||||    
T  17705466 caactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggct 17705552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 22371016 - 22371117
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| |  |||||||||||| |||||||||||||| || | |||   ||||| |||||||||||     
T  22371016 gtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctcgtgt---aaaaacagggtaaggctg 22371112  T
Q  314 cgtac 318  Q
    |||||    
T  22371113 cgtac 22371117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 29420048 - 29419970
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaag 309  Q
    |||||||||||||| |  |||| | ||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 29419970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 25249913 - 25249810
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||| ||||||||||||||| ||||||| | ||||||||||||| ||||| ||||||||  | ||||||| | ||| |||||||||||     
T  25249913 gtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgt-acaaacagggtaaggctg 25249815  T
Q  314 cgtac 318  Q
    |||||    
T  25249814 cgtac 25249810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 24860155 - 24860077
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||| ||||||||||| ||||||| ||||||| | ||||| ||||||| ||| ||||||||||||| || |||||||||    
T  24860155 tggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaa 24860077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 21377232 - 21377151
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| ||||||| | ||||| ||| ||| ||||| | |||||| || ||||||||||||| |||||||||||    
T  21377232 ggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggct 21377151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 14444718 - 14444785
Alignment:
Q  244 taatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||| | ||||||||||||| |||||||||||||| || ||||||| ||||| |||||||||||    
T  14444718 taatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggct 14444785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 17380391 - 17380331
Alignment:
Q  235 aagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgta 295  Q
    |||||||||| ||||||| | ||||||||||||| ||||| ||||||||||| ||||||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 17380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 318
Target Start/End: Complemental strand, 32781448 - 32781360
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| |||||  | | ||||||||| ||| |||||  |||||||||| ||||||||||||| |||||||| || |||||    
T  32781448 tggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtac 32781360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 23145857 - 23145770
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||||  ||||| | ||||||||||||| ||||| || |||||  | ||||||||||||| || |||||||| |||||    
T  23145857 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtac 23145770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 23557647 - 23557560
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||||  ||||| | ||||||||||||| ||||| || |||||  | ||||||||||||| || |||||||| |||||    
T  23557647 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtac 23557560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 9671139 - 9671242
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaag-gtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| |||| |||||||||||||| ||||||| | ||  |||||||||| || ||||||||||| || |||||||  |||| |||||||||||    
T  9671139 gtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgt--aaaacagggtaaggct 9671236  T
Q  313 acgtac 318  Q
     |||||    
T  9671237 gcgtac 9671242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 26684786 - 26684692
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca-accgcttgtgt-aaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||  | |||||||  |||| |||||||| ||||| ||| ||||||| |||||||| ||||||||| |||||    
T  26684786 caactggtaaagttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggtaaggctgcgtac 26684692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 10546153 - 10546226
Alignment:
Q  246 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggctacgtac 318  Q
    ||||||| | ||||||||||||| |||||||||||||| || ||||| | |||||| ||||||||||| |||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtac 10546226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 19614983 - 19615055
Alignment:
Q  246 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| | ||||||||||||| ||||||| |||||| || ||||| ||||||| |||||||| || |||||    
T  19614983 atgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtac 19615055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 27573581 - 27573661
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgta 295  Q
    ||||| |||| ||||||||||||||||||| ||||||| | |||||||  |||| |||||| || |||| || ||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgta 27573661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 44521532 - 44521451
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||| | | ||||| | ||||||||| ||| || || ||||||||| | ||||||||||||| | |||||||||    
T  44521532 ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggct 44521451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 45235976 - 45235891
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa-aatagggtaaggctacgt 316  Q
    ||||||||||| | ||||||| | ||| ||||| ||| ||||||| ||||||  | ||| ||||||| ||||||||||||||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataatagggtaaggctacgt 45235891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 99421 - 99361
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgt 292  Q
    ||||||||||||| | ||||| | ||||||||||||| ||||||| |||||| || |||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt 99361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 14544022 - 14544118
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgta-aaaaatagggtaag 309  Q
    |||||| |||| ||| ||||||||||||||| ||||||| | ||||| || |||  | || ||||||||| || |||||||| ||||| ||||||||    
T  14544022 gtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaag 14544118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 31158598 - 31158522
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaag 309  Q
    |||||||||||| ||||||| | ||||||| ||||| ||||| |  ||||| || |||| |||||||| ||||||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaag 31158522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 21646924 - 21647027
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 314  Q
    ||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || ||||||||||||||||||||||||| |    
T  21646924 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgc 21647023  T
Q  315 gtac 318  Q
    ||||    
T  21647024 gtac 21647027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 16408777 - 16408675
Alignment:
Q  216 aaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacg 315  Q
    |||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||| || ||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcg 16408678  T
Q  316 tac 318  Q
    |||    
T  16408677 tac 16408675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 5648218 - 5648321
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||| ||||| |||||||||||     
T  5648218 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctg 5648316  T
Q  314 cgtac 318  Q
    |||||    
T  5648317 cgtac 5648321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 20224943 - 20225045
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||||||||| |||||||  |||| |||||||||||     
T  20224943 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt--aaaacagggtaaggctg 20225040  T
Q  314 cgtac 318  Q
    |||||    
T  20225041 cgtac 20225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 48598999 - 48598897
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| |||||||||||     
T  48598999 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctg 48598902  T
Q  314 cgtac 318  Q
    |||||    
T  48598901 cgtac 48598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 6430801 - 6430698
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||||| |||||||| || |||||||| |||| |||||||||||     
T  6430801 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgta-aaaacagggtaaggctg 6430703  T
Q  314 cgtac 318  Q
    |||||    
T  6430702 cgtac 6430698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 10660363 - 10660461
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||| ||  ||| ||||||||||||||||| ||| |||||||||||||||| ||||    
T  10660363 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggct 10660461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 10874508 - 10874606
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||| ||  ||| ||||||||||||||||| ||| |||||||||||||||| ||||    
T  10874508 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggct 10874606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 5306839 - 5306755
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| ||||||||||||||| ||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||    
T  5306839 gtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 5306755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 16911521 - 16911625
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| |||||||   ||||||||||||| ||||||| |||||| || |||||||| |||  |||||||||||     
T  16911521 gtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctg 16911620  T
Q  314 cgtac 318  Q
    |||||    
T  16911621 cgtac 16911625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 19027823 - 19027911
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||| ||||||||| | ||||| | ||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||| |||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtac 19027911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 37494822 - 37494906
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||||||||||||||||  ||| ||| | |||||||| |||| ||||||||||||||||| ||||||||||||| |||||||||    
T  37494822 caactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagg 37494906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 30352767 - 30352681
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||| |||| ||||||||||||||||||| | ||||| | |||||||||||||  ||||||||||||| || |||||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 17315474 - 17315389
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| |||| |||| |||||||||||||| ||||||| | ||||||||||||| || |||| ||||||||| ||||||||||||    
T  17315474 gtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaa 17315389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 47528692 - 47528602
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || |||||||  |||| ||||||||||| |||||    
T  47528692 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtac 47528602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 14983793 - 14983889
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| ||||| |||||||||||||||||| || |||  | |||||||||| || ||||| | |||||| || |||||||||||||||||||||||    
T  14983793 gtaaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaagg 14983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 30639339 - 30639442
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| |||||||||||||||||||  |||||| | |||||||| |||| ||||||||||||||  | ||||||| ||||| |||||||||||     
T  30639339 gtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgt-aaaaacagggtaaggctg 30639437  T
Q  314 cgtac 318  Q
    |||||    
T  30639438 cgtac 30639442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 41018945 - 41018866
Alignment:
Q  238 ttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| | ||||| | ||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaattagggtaaggctacgtac 41018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 487294 - 487207
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||| ||||||||||| |||||||| |||| | ||||| ||| |||||    
T  487294 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtac 487207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 14590796 - 14590895
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||||||| || ||||||| |||||| || ||||| | |||||| |||||||||||    
T  14590796 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggct 14590895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 40915802 - 40915873
Alignment:
Q  228 actggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    ||||||||||||||||| |||||||   ||||||||||||| |||||||||||||| || ||||||||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 40915873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 44363294 - 44363204
Alignment:
Q  228 actggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||| ||||||| | ||||||||| ||| |||||||| ||||| || | ||||||||||| |||||| |||| |||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtac 44363204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 11054315 - 11054238
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||| |||||  | |||||||||||    
T  11054315 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaaaa 11054238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 35567146 - 35567227
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| |||| || | ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggct 35567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 42164307 - 42164227
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| ||||||| ||||||| | ||||||||||||| ||||| ||||||||||| |||||||| |||| |||||||||||    
T  42164307 ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta-aaaacagggtaaggct 42164227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 43035224 - 43035305
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| | ||||| | ||||||||||||| |||||| |||||||||| ||||||||| ||| | |||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggct 43035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 7385628 - 7385556
Alignment:
Q  238 ttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||||| ||||||| | ||||||||||||| ||| |||||||||| || | |||||||||||||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaagg 7385556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 17043549 - 17043466
Alignment:
Q  235 aagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||| | ||||| | |||||||| |||| |||||||||||||| || ||||||||||| | ||||||||||| |||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtac 17043466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 25463108 - 25463167
Alignment:
Q  241 ttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||| ||||||| | ||||||||||||| ||||||||||||||||| |||||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaa 25463167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 54730225 - 54730312
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggctacgta 317  Q
    |||||||||||||| |||||||   ||||||||||||| ||||||| |||||| || ||||||| |||||||||| ||||||| ||||    
T  54730225 ggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgta 54730312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 54966997 - 54967076
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||||||||||| ||||||| | ||||||||  ||| |||| ||||||| |||| ||||||||||||| |||||||||    
T  54966997 ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaagg 54967076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 47443958 - 47444020
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| |||||||||||||| || |||| |||||||| ||||||||||| |||||    
T  47443958 aaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtac 47444020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 23501752 - 23501842
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||      ||| || ||||||||||||| |||||||||    
T  23501752 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaagg 23501842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 13256561 - 13256473
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | |||||||  |||| |||||||||    | || ||||||||||||| ||||||||||| |||||    
T  13256561 caactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgg----agcctcttgtgtaaaaaacagggtaaggctgcgtac 13256473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 32478942 - 32478864
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||| ||||||| |  ||||||| |||| ||||||||||||||||| || |||| ||||| |||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgt-aaaaacagggtaaggct 32478864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 312
Target Start/End: Complemental strand, 9987954 - 9987912
Alignment:
Q  270 aagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  9987954 aagtcctggaaacaacctcttgtgtaaacaatagggtaaggct 9987912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 39077948 - 39077886
Alignment:
Q  236 agttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||| ||||||  | ||||||||||||| |||||||||||||| || |||||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 39077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 8473789 - 8473716
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt 294  Q
    |||| ||||||||||||||||||| || |||| | |||||  |||||| |||||||||||||| || |||||||    
T  8473789 tggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt 8473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 30690340 - 30690271
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaata 302  Q
    |||||| ||||| | ||||| | ||||||||||||| |||||||||||| | || |||||||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaata 30690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 49938746 - 49938681
Alignment:
Q  234 aaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    ||||||||||| | ||||| | |||||||| |||| |||||||||||||| || ||||||||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 49938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 25343162 - 25343250
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||| | ||||| |  ||||||| |||| |||| ||||||| |  | ||||||||||||| ||||||||||| |||||    
T  25343162 tggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtac 25343250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 7227710 - 7227785
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    |||||||||||| ||||||| | || |||| | ||| || | | |||||||||||||||||| |||||||||||||    
T  7227710 taaagttgttgtcatgtgactgaaaagtcatgagttcaaattcaggaaacaaccgcttgtgttaaaaatagggtaa 7227785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 9832468 - 9832385
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||||| || |||| | ||||||||||||| |||||||| ||||| || |||||||  |||| ||||||||||| |||||    
T  9832468 taaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgt--aaaacagggtaaggctgcgtac 9832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 20639777 - 20639731
Alignment:
Q  272 gtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||| || ||||||||||||| ||||||||||| |||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 20639731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 5313170 - 5313101
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    |||||| ||||  |||||||||||||||||| ||||||  | ||||||||||||| || ||||| |||||    
T  5313170 gtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaaca 5313101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 39029220 - 39029139
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||  ||||||   |||||||  |||| ||| | |||||||| || ||||||||||||| |||||||||||    
T  39029220 ggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggct 39029139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 54640498 - 54640429
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||| ||||||| | ||| | | ||||||||||||| ||||| |||||||| || |||||||||||||    
T  54640498 ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa 54640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 7038044 - 7038115
Alignment:
Q  246 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| | |||||||| |||| |||||||| ||||| |  |||||||||||||||||||||| || |||||    
T  7038044 atgtgactgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtac 7038115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 20405064 - 20405104
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacggg 266  Q
    ||||||||||||||||||| ||||||| | |||||||||||    
T  20405064 caactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 23580365 - 23580293
Alignment:
Q  233 taaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaataggg 305  Q
    |||||||||||| | ||||| | ||||||||||||| |||| || |||| | || ||||||||||||| ||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggg 23580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 30496489 - 30496413
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaa 297  Q
    |||| ||||||  ||||||||||| | ||||| | ||||||||| ||| ||||| |||||||| || ||||||||||    
T  30496489 tggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaa 30496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 30581601 - 30581557
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    ||||||| ||||| ||||| ||||||||||| |||||||||||||    
T  30581601 aaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaa 30581557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 54175043 - 54175126
Alignment:
Q  235 aagttgttgtaatgtgacagcaaggtcacgggttgaagtcctgg-aaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||| ||||||| | || ||||||| || ||||||||| ||||| || ||||||| ||||| ||||||||||| |||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgt-aaaaacagggtaaggctgcgtac 54175126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 55766630 - 55766590
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacggg 266  Q
    ||||||||||||||||||| ||||||| | |||||||||||    
T  55766630 caactggtaaagttgttgtcatgtgaccggaaggtcacggg 55766590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 46991798 - 46991884
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  46991798 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 46991884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 30395903 - 30395800
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 314  Q
    ||||| |||| ||||||||||||||||||| |||||||   ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||| |    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 30395804  T
Q  315 gtac 318  Q
    ||||    
T  30395803 gtac 30395800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 6925096 - 6925180
Alignment:
Q  228 actggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||| ||||||| | ||||||||||||| |||||||||||| | || |||||||||||||||||||||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggct 6925180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 18944625 - 18944729
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| ||| |||||||||| || ||||||||||||| |||||||||||     
T  18944625 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 18944724  T
Q  314 cgtac 318  Q
    |||||    
T  18944725 cgtac 18944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 41319982 - 41319878
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| || ||||||||||||||||||||| ||||||| | |||||||| |||| ||||||||||||||  | ||||||||||||| |||||||||||     
T  41319982 gtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctg 41319883  T
Q  314 cgtac 318  Q
    |||||    
T  41319882 cgtac 41319878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 18724704 - 18724623
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  18724704 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 18724623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 34725272 - 34725170
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| |||||||||||     
T  34725272 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctg 34725175  T
Q  314 cgtac 318  Q
    |||||    
T  34725174 cgtac 34725170  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 20004256 - 20004164
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || || |||||||||| | ||||||||| |||||    
T  20004256 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtac 20004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 23768484 - 23768392
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||| | |||||||| |||| ||||| |||||||| || ||||||||||||| ||||||||||| |||||    
T  23768484 caactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 23768392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 32632732 - 32632629
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||| || |||||||| |||| |||||||||||     
T  32632732 gtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggctg 32632634  T
Q  314 cgtac 318  Q
    |||||    
T  32632633 cgtac 32632629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 46248129 - 46248025
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | || |||||||||| ||||| |||||||| || ||||||||||||| |||||||| ||     
T  46248129 gtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactg 46248030  T
Q  314 cgtac 318  Q
    |||||    
T  46248029 cgtac 46248025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 22327101 - 22327179
Alignment:
Q  234 aaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||| ||||||| | |||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 22930243 - 22930158
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||| ||||| |||||||||||||| ||  |||||||||||    
T  22930243 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaa 22930158  T

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Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 8197037 - 8197129
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||| |||||||||| ||||||| | ||||||||||||| ||||||||| ||   || ||||||||||||| | |||||||||||||||    
T  8197037 caactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgtac 8197129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 14617020 - 14617116
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| |||| |||| |||||||||||||| ||||||| | ||||||||| ||| |||||||||||||| || |||||||||| || | |||||||    
T  14617020 gtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaagg 14617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 27201645 - 27201733
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||| ||||||| | ||||||| ||||| |||||||||||||| || ||||||| | ||| ||||||||||| |||||    
T  27201645 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtac 27201733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 2435946 - 2435859
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||||| | ||||||||||||| |||||||||||||| || | ||||| |||||||||||||| || |||||    
T  2435946 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtac 2435859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 2436052 - 2435981
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaata 302  Q
    |||||||||||||| | ||||| | ||||||||||||| ||||||||||||||||| | |||||||||||||    
T  2436052 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaata 2435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 20036218 - 20036285
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaa 297  Q
    ||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||| | ||||||||||    
T  20036218 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaa 20036285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 15511311 - 15511229
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||||||| | | ||||||||   ||||||||||||||||  || ||||||||||||| |||||||||||    
T  15511311 tggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggct 15511229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 25468421 - 25468343
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||||||||||| ||||||  | ||||||| ||||| ||||||||||||||||| ||||||||||||  |||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaagg 25468343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 44485267 - 44485181
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||| ||||||  | |||||||||||||  |||||||||||||||| ||||||||||| | | ||||||||| |||||    
T  44485267 gtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggctgcgtac 44485181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 47214500 - 47214562
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||    
T  47214500 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 10668202 - 10668303
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtga-----cagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaa 308  Q
    |||||| |||| ||||||||||||||||||| ||||||     | | ||||||||||||| |||||||||||||| || ||||||||||||| | |||||    
T  10668202 gtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaa 10668301  T
Q  309 gg 310  Q
    ||    
T  10668302 gg 10668303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 25290140 - 25290244
Alignment:
Q  209 gaagagtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaa--acaaccgcttgtgtaaaaaatagggt 306  Q
    |||| |||||| |||| |||| |||||||||||||| ||||||| | ||||||||| ||| ||||| |||||  ||| || ||||||||||||| |||||    
T  25290140 gaagggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggt 25290239  T
Q  307 aaggc 311  Q
    |||||    
T  25290240 aaggc 25290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 35117927 - 35117846
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| | ||||| | ||||||||||||| |||||||||||| | || ||||||||||| | |||||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggct 35117846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 38478456 - 38478354
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||| ||||| ||||||| ||||||| | ||||||||||||| ||||||| |||||| || |||||||  |||| |||||||||||     
T  38478456 gtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt--aaaacagggtaaggctg 38478359  T
Q  314 cgtac 318  Q
    |||||    
T  38478358 cgtac 38478354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 45402077 - 45402161
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| |||| ||||||||||||||||||| ||||||  | ||||| ||||||| |||||||||||||| || ||||||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtgatgg-aaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaa 45402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 17470505 - 17470418
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||| | ||||| | | ||||| ||||| ||||||| |||||| || ||||||||||||| ||||||||||| |||||    
T  17470505 ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 17470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 19932921 - 19932827
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||||||||||||||||| ||||||| | ||||||| ||||| ||||  |||| ||||||  |||||||||||| ||||||||||| |||||    
T  19932921 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacc-tttgtgtaaaaaacagggtaaggctgcgtac 19932827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 33222973 - 33223051
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||| |||| |||||||||||||| ||||||| | |||||||||| || ||||| |||||||| || ||||||||||||    
T  33222973 tggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaa 33223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 4430187 - 4430098
Alignment:
Q  229 ctggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||||||||| ||||||| | ||||||||||||| ||||| || |||||    ||||||||||||| |||||||| || |||||    
T  4430187 ctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtac 4430098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 27474275 - 27474348
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    ||||||||||||||||||| ||||||| | |||||||| |||| ||||| ||||||||  | ||||||||||||    
T  27474275 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaa 27474348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 34714605 - 34714674
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    |||||| |||| ||||||||||||||||||| ||||||  | ||||||||||||| ||||| ||||||||    
T  34714605 gtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 9939463 - 9939539
Alignment:
Q  234 aaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||||||||| ||||||| | ||||||||| ||| ||||||||||||||||| ||||| ||| ||| | |||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaagg 9939539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 45812711 - 45812627
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| |||||| |||||||||||| ||||||| | |||||||| |||| |||||||| |||||  | |||||||||||    
T  45812711 gtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaa 45812627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 11596512 - 11596597
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgta 317  Q
    |||||||| | ||| ||||||| | || |||||||||| ||||||| ||||||||| ||||||| ||||| ||||||||||| ||||    
T  11596512 ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgt-aaaaacagggtaaggctgcgta 11596597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 40424724 - 40424786
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcct 276  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||| |||||||| |||||||    
T  40424724 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 50760385 - 50760299
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgta 317  Q
    |||||||| ||||| ||||||| |  |||||||||||| |||||||| ||||| || |||||||| ||||  |||||||||| ||||    
T  50760385 ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgta 50760299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 12127010 - 12126909
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 314  Q
    ||||| |||| ||||| ||||||||||||| |||| |  | ||||||||||||| |||| ||||||||| |  |||||||  |||| ||||||||||| |    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgt--aaaacagggtaaggctgc 12126913  T
Q  315 gtac 318  Q
    ||||    
T  12126912 gtac 12126909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 35005147 - 35005203
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||| ||||| || ||||| || ||||||||||||| |||||||||||    
T  35005147 aaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggct 35005203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 31272508 - 31272465
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||    
T  31272508 aaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 31272465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 18742137 - 18742083
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggtt 268  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||| |||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggtt 18742083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 6983969 - 6983916
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    ||||||||||||||| | ||||| | |||||||| |||| ||||||||||||||    
T  6983969 tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 6983916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 25554882 - 25554817
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgta 295  Q
    ||||||||||||||| | |||||   |||| |||| ||| ||||||||||||||||| ||||||||    
T  25554882 tggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgta 25554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 27136820 - 27136732
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||||||| |||||||||||||| | ||||  | |||| |||| ||| |||| |||| ||||||| ||||||||||||| | |||||||    
T  27136820 tggcacaac-ggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaagg 27136732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 19414437 - 19414505
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||||||||| || |||| | ||||||||||||| ||||||| |||| | || ||| |||||||    
T  19414437 tggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa 19414505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 19701570 - 19701638
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||||||||||||  |||||| | || |||||||||| ||||| || ||||| || |||||||||||||    
T  19701570 gtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaa 19701638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 24564382 - 24564422
Alignment:
Q  270 aagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    ||||| ||||||||||| ||||||||||||| |||||||||    
T  24564382 aagtcttggaaacaacctcttgtgtaaaaaacagggtaagg 24564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 39215079 - 39215031
Alignment:
Q  270 aagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| |||||||||||| |||||||||||||  |||||||||| |||||    
T  39215079 aagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtac 39215031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 45264534 - 45264478
Alignment:
Q  256 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||  ||| ||||||||||||||||| |||||| |||||| || ||||||||    
T  45264534 aaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggct 45264478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 8409202 - 8409306
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||||||||||| | |||||||||| || |||||||||||||  || ||||||||||||| |||||||||||     
T  8409202 gtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctg 8409301  T
Q  314 cgtac 318  Q
    |||||    
T  8409302 cgtac 8409306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 12222086 - 12221989
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| ||||| |||||||| || ||||||||||||| ||||||||||| |||||    
T  12222086 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 1346923 - 1347025
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||  |||| |||||||||||     
T  1346923 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgt--aaaacagggtaaggctg 1347020  T
Q  314 cgtac 318  Q
    |||||    
T  1347021 cgtac 1347025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 29356034 - 29355929
Alignment:
Q  214 gtaaccctggcacaactggtaaag-ttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||| ||||||||||||||||  ||||||| ||||||| | ||||||||||||| |||||||||||||| || ||||||||| ||| |||||||||||    
T  29356034 gtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggct 29355935  T
Q  313 acgtac 318  Q
     |||||    
T  29355934 gcgtac 29355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 1354931 - 1354829
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || |||||||  |||| |||||||||||     
T  1354931 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctg 1354834  T
Q  314 cgtac 318  Q
    |||||    
T  1354833 cgtac 1354829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 1941826 - 1941918
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| || |||| | |||||| ||| |||||||| || |||||||| ||||||||||||| ||||||||||| |||||    
T  1941826 caactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgtac 1941918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 2166576 - 2166504
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| |||||||||||    
T  2166576 caactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 2178209 - 2178137
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| |||||||||||    
T  2178209 caactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2178137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 3815253 - 3815160
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggta 307  Q
    |||||| |||| ||||||||||||||||||| ||||||| | || |||||||||| ||||||||||||||  |  |||||||||||||| ||||    
T  3815253 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggta 3815160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 13905138 - 13905057
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||| ||||||| | ||||||||||| | |||||||| |||| ||| ||||||||||||| |||||||||||    
T  13905138 ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggct 13905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 14975255 - 14975170
Alignment:
Q  215 taaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    ||||| |||| |||| |||||||||||||| ||||||| | |||||||||| || |||||||||||||| || |||||||||||||    
T  14975255 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaa 14975170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 14553483 - 14553568
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||||| |||||||   |||||||| |||| |||||||||||| | |  |||||||||||||||||||||||||    
T  14553483 caactggtaaagttgttgtcatgtgacta-aaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggct 14553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 9161099 - 9161167
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || ||||||||||||    
T  9161099 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 9161167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 20400626 - 20400730
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||| ||||| ||||||||| ||||||| | |||||||| |||| ||||  ||||||||| | ||||||||||||| |||||||| ||     
T  20400626 gtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactg 20400725  T
Q  314 cgtac 318  Q
    |||||    
T  20400726 cgtac 20400730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 6024204 - 6024296
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||||||||||||||| ||||||  | |||||||||| || || |||| |||||| || ||||||||||||| | |||||| || |||||    
T  6024204 caactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtac 6024296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 15866213 - 15866110
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||  ||||||  | ||||||| ||||| || ||||||||||| || |||  |||||||| ||||||| |||     
T  15866213 gtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaaagctg 15866114  T
Q  314 cgta 317  Q
    ||||    
T  15866113 cgta 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 17432332 - 17432395
Alignment:
Q  247 tgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||||| | |||||||| |||| ||||||||||||||||  ||||||||||||| |||||||||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 17432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 24097547 - 24097638
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    |||||||||||||||| ||| ||| |||| || | ||||||||| ||| ||||||| ||| || || ||||| ||||||| |||||||||||    
T  24097547 tggcacaactggtaaaattgatgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggct 24097638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 24734599 - 24734678
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa 300  Q
    |||| ||||||||||||||||||| ||||||| | |||||||   ||| || |||| ||||||||| |||||||||||||    
T  24734599 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaaa 24734678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 32728314 - 32728237
Alignment:
Q  232 gtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaag 309  Q
    ||||||||||||| ||||||| | |||||||| | || ||||  ||||||||||| ||| ||||||||| ||||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaag 32728237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 7947531 - 7947444
Alignment:
Q  231 ggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    |||||||||| |||   ||||| | |||||||| |||| || |||||||||||||| | ||||||||||  ||||||||||| |||||    
T  7947531 ggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtac 7947444  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 33138838 - 33138889
Alignment:
Q  260 tcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggc 311  Q
    ||||||||| ||||||||||||||||| ||||| ||||||| || |||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggc 33138889  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 28007604 - 28007671
Alignment:
Q  233 taaagttgttgtaatgtgacagcaa--ggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||||||||| ||||||||  ||  ||||||||||| |||||||||||| | || |||||||||||    
T  28007604 taaagttgttgtcatgtgacatgaaaaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaa 28007671  T

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Target: scaffold0057 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 46797 - 46886
Alignment:
Q  221 tggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaagg 310  Q
    |||| ||| ||||||||||||||| |||||||   ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  46797 tggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaagg 46886  T

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Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 24943 - 24844
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 313  Q
    |||||| |||| ||||||||||||||||||| ||||||| | ||||||| ||||| |||||     |||| || ||||||||||||| |||||||||||     
T  24943 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggctg 24849  T

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Target: scaffold0254 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 4128 - 4200
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| |||||||||||    
T  4128 caactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 4200  T

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Target: scaffold0187 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 10212 - 10140
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||    
T  10212 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10140  T

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Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 20540 - 20468
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||||||    
T  20540 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20468  T

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Target: scaffold0168 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 30538 - 30622
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || |||||||||||    
T  30538 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa 30622  T

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Target: scaffold0311 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 10781 - 10867
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||  ||| |||||||| ||||||||||||| |||||| ||||    
T  10781 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggct 10867  T

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Target: scaffold0049 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 58935 - 59040
Alignment:
Q  213 agtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 312  Q
    ||||||| |||  ||||||||||| || |||| ||||||| | ||||||||||||| |||||||||||||| || ||||| ||||||| |||||||| ||    
T  58935 agtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagact 59034  T
Q  313 acgtac 318  Q
     |||||    
T  59035 gcgtac 59040  T

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Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 226582 - 226483
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgt-aaaaaatagggtaaggct 312  Q
    |||||| |||| ||||||||||||||||||| ||||||| | |||||||||| || ||||||| |||||| || ||||| | |||||| |||||||||||    
T  226582 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggct 226483  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 11093 - 11174
Alignment:
Q  216 aaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    |||| |||| ||||||||||||||||| || |||||| | ||||||||||||| |||||||||||||| || |||||||||||    
T  11093 aaccttggcgcaactggtaaagttgttcta-tgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 11174  T

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Target: scaffold0258 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 13199 - 13114
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||| |||| |||| |||||||||||||| ||||||| | |||||||| |||| |||||||||||||| || |||| |||||||    
T  13199 gtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaa 13114  T

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Target: scaffold1176 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 1745 - 1677
Alignment:
Q  230 tggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa 298  Q
    ||||||||||||||| ||||||| | ||||||| ||||| |||||||| |||||||| |||||||||||    
T  1745 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa 1677  T

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Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 8865 - 8935
Alignment:
Q  229 ctggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||||||||||| ||||||| | |||||||| |||| || |||||||||||||  ||||||||||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaa 8935  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 83834 - 83904
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaa 284  Q
    |||||| |||| ||||| ||||||||||||| ||||||| | ||||||||||||| ||||| |||||||||    
T  83834 gtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

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Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 24623 - 24692
Alignment:
Q  214 gtaaccctggcacaactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaaca 283  Q
    |||||| |||||||| || |||||||||||| | ||||| | ||||||||||||| ||||||||||||||    
T  24623 gtaaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaaca 24692  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 43100 - 43173
Alignment:
Q  226 caactggtaaagttgttgtaatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 299  Q
    |||||||||||||| |||| ||||||  | ||||||||| ||| | ||||| |||||| || ||||||||||||    
T  43100 caactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaa 43173  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 23606 - 23662
Alignment:
Q  262 acgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtac 318  Q
    ||||||| ||||| || |||||||| ||||||||||||| ||||| ||||| |||||    
T  23606 acgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtac 23662  T

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