View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19953_low_19 (Length: 263)
Name: NF19953_low_19
Description: NF19953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19953_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 8898501 - 8898254
Alignment:
| Q |
1 |
gatattgataccgagatatgtgcatgtagtaatgaactgatagaaccttctagtagagctgtcgacttgatttccacatttgggaatctccataagcgca |
100 |
Q |
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| T |
8898501 |
gatattgataccgagatacgtgaatgtagtaatgaactgatagaaccttctagcagagctgtcgacttgatttccacatttgggaatctccataagcgca |
8898402 |
T |
|
| Q |
101 |
ctaaggaaatccatgttactaatggggataaagaaaccaagtttgattttgaaaaagaactggagctttctttaagaagtgatttttctggcagctcatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8898401 |
ctaaggaaatccatgttactaatggggataaagaaaccaagtttgattttgaaaaagaactggagctttctttaagaagtgatttttctggcagctcatg |
8898302 |
T |
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| Q |
201 |
caaacaagcaagtgaaacaactgaggagtggcaaagattgaaccactc |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8898301 |
caaacaagcaagtgaaacaactgaggagtggcaaagattgaaccactc |
8898254 |
T |
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