View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19953_low_7 (Length: 550)

Name: NF19953_low_7
Description: NF19953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19953_low_7
NF19953_low_7
[»] chr4 (23 HSPs)
chr4 (41-445)||(14983312-14983704)
chr4 (463-532)||(21646935-21647004)
chr4 (463-532)||(16408698-16408767)
chr4 (463-532)||(47528623-47528692)
chr4 (465-532)||(40915802-40915869)
chr4 (463-532)||(5648230-5648299)
chr4 (463-532)||(11054241-11054310)
chr4 (463-532)||(48598918-48598987)
chr4 (465-532)||(44363227-44363294)
chr4 (463-532)||(5306758-5306827)
chr4 (463-532)||(6430720-6430789)
chr4 (463-532)||(10660375-10660444)
chr4 (463-532)||(10874520-10874589)
chr4 (463-532)||(16911533-16911602)
chr4 (468-532)||(54730225-54730289)
chr4 (474-532)||(17043489-17043547)
chr4 (474-532)||(49938685-49938743)
chr4 (503-532)||(9832406-9832435)
chr4 (463-532)||(20224955-20225024)
chr4 (463-532)||(30639351-30639420)
chr4 (463-532)||(37494822-37494891)
chr4 (463-531)||(8473716-8473784)
chr4 (468-532)||(54966997-54967061)
[»] chr8 (21 HSPs)
chr8 (460-532)||(25250490-25250562)
chr8 (463-532)||(6760793-6760862)
chr8 (443-532)||(17823527-17823616)
chr8 (463-532)||(28407387-28407456)
chr8 (463-532)||(28817721-28817790)
chr8 (464-532)||(36720768-36720836)
chr8 (463-532)||(12670343-12670412)
chr8 (463-532)||(20869591-20869660)
chr8 (467-532)||(26954107-26954172)
chr8 (463-532)||(30454190-30454259)
chr8 (445-532)||(13160655-13160742)
chr8 (467-532)||(2626494-2626559)
chr8 (463-532)||(7136624-7136693)
chr8 (463-532)||(35261650-35261719)
chr8 (463-532)||(39461091-39461160)
chr8 (463-532)||(44530120-44530189)
chr8 (444-532)||(18164854-18164942)
chr8 (463-529)||(20284171-20284237)
chr8 (463-529)||(21070800-21070866)
chr8 (463-529)||(29521783-29521849)
chr8 (460-532)||(8897859-8897931)
[»] chr7 (21 HSPs)
chr7 (463-532)||(32758232-32758301)
chr7 (464-532)||(42805496-42805564)
chr7 (463-532)||(11617683-11617752)
chr7 (463-532)||(18327005-18327074)
chr7 (463-532)||(19426984-19427053)
chr7 (460-532)||(47716427-47716499)
chr7 (463-532)||(2541114-2541184)
chr7 (463-532)||(7794601-7794670)
chr7 (463-532)||(10693166-10693235)
chr7 (463-532)||(21172102-21172171)
chr7 (463-532)||(27629605-27629674)
chr7 (463-532)||(34626302-34626371)
chr7 (463-532)||(42798640-42798709)
chr7 (463-532)||(43557443-43557512)
chr7 (463-532)||(46354165-46354234)
chr7 (463-532)||(47077948-47078017)
chr7 (468-532)||(23419769-23419833)
chr7 (460-531)||(8149042-8149113)
chr7 (463-521)||(35334920-35334978)
chr7 (463-529)||(42495933-42495999)
chr7 (464-532)||(42476845-42476913)
[»] chr5 (13 HSPs)
chr5 (463-532)||(41014290-41014359)
chr5 (463-532)||(4619201-4619270)
chr5 (463-532)||(24448861-24448930)
chr5 (463-532)||(37024649-37024718)
chr5 (463-529)||(38879552-38879618)
chr5 (463-532)||(8170077-8170146)
chr5 (467-532)||(27328727-27328792)
chr5 (463-532)||(35710284-35710353)
chr5 (463-532)||(43334173-43334242)
chr5 (468-532)||(209022-209086)
chr5 (468-532)||(23974756-23974820)
chr5 (475-532)||(19143037-19143094)
chr5 (475-527)||(1405170-1405222)
[»] chr3 (15 HSPs)
chr3 (463-532)||(13730699-13730768)
chr3 (463-532)||(52926305-52926374)
chr3 (463-532)||(4495759-4495828)
chr3 (463-532)||(7696980-7697049)
chr3 (463-532)||(8247784-8247853)
chr3 (463-532)||(10870046-10870115)
chr3 (463-532)||(12914130-12914199)
chr3 (463-532)||(26869700-26869769)
chr3 (464-529)||(29366820-29366885)
chr3 (463-532)||(46421132-46421201)
chr3 (460-532)||(39203506-39203578)
chr3 (460-532)||(13628887-13628960)
chr3 (463-532)||(40272907-40272976)
chr3 (468-531)||(53062036-53062099)
chr3 (463-532)||(1217083-1217152)
[»] chr2 (15 HSPs)
chr2 (463-532)||(8455411-8455480)
chr2 (463-532)||(17705466-17705535)
chr2 (463-532)||(11514407-11514476)
chr2 (463-532)||(12024013-12024082)
chr2 (464-532)||(44604826-44604894)
chr2 (461-532)||(17667971-17668042)
chr2 (463-529)||(14530289-14530355)
chr2 (463-532)||(23397737-23397806)
chr2 (463-532)||(24200720-24200789)
chr2 (460-532)||(17623532-17623604)
chr2 (463-525)||(22371028-22371090)
chr2 (463-532)||(10543669-10543738)
chr2 (463-532)||(21779354-21779423)
chr2 (463-532)||(25079813-25079882)
chr2 (460-532)||(7214502-7214574)
[»] scaffold0187 (2 HSPs)
scaffold0187 (463-532)||(10143-10212)
scaffold0187 (463-532)||(20471-20540)
[»] scaffold0168 (1 HSPs)
scaffold0168 (463-532)||(30550-30619)
[»] chr6 (7 HSPs)
chr6 (463-532)||(1354850-1354919)
chr6 (468-532)||(9161099-9161163)
chr6 (463-532)||(1346935-1347004)
chr6 (463-532)||(12222012-12222081)
chr6 (463-532)||(14553483-14553551)
chr6 (463-532)||(14975175-14975244)
chr6 (475-532)||(29355952-29356009)
[»] chr1 (22 HSPs)
chr1 (463-532)||(18944637-18944706)
chr1 (463-532)||(20004187-20004256)
chr1 (463-532)||(23768415-23768484)
chr1 (463-532)||(30395823-30395892)
chr1 (463-532)||(34725191-34725260)
chr1 (463-532)||(45812630-45812699)
chr1 (463-532)||(46991798-46991867)
chr1 (465-532)||(6925096-6925163)
chr1 (461-532)||(41319901-41319972)
chr1 (463-521)||(14988025-14988083)
chr1 (463-532)||(14617032-14617101)
chr1 (467-532)||(25554817-25554882)
chr1 (463-532)||(27474275-27474344)
chr1 (463-532)||(32632651-32632720)
chr1 (463-532)||(45402089-45402157)
chr1 (468-532)||(18724640-18724704)
chr1 (460-532)||(21723655-21723726)
chr1 (463-529)||(47214505-47214571)
chr1 (503-533)||(50760320-50760350)
chr1 (463-532)||(22930162-22930231)
chr1 (463-532)||(46248048-46248117)
chr1 (467-531)||(27201645-27201709)
[»] scaffold0311 (1 HSPs)
scaffold0311 (463-532)||(10781-10850)
[»] scaffold0057 (1 HSPs)
scaffold0057 (467-532)||(46806-46871)
[»] scaffold1176 (1 HSPs)
scaffold1176 (467-532)||(1680-1745)
[»] scaffold0258 (1 HSPs)
scaffold0258 (463-528)||(13122-13187)


Alignment Details
Target: chr4 (Bit Score: 323; Significance: 0; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 41 - 445
Target Start/End: Original strand, 14983312 - 14983704
Alignment:
Q  41 tgtacacacactagtagcttgctacttgggatgtgtaagtggcttgtttaaatgttttgcagctggtttaatttaatattatgagtttaattgttcttca 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14983312 tgtacacacactagtagcttgctacttgggatgtgtaagtggcttgtttaaatgttttgcagctgttttaatttaatattatgagtttaattgttcttca 14983411  T
Q  141 aagtagttaaaaattactgtggagcatcattcaacaatttaacctcatgataatcgtctataaaagaaggaatatatggtagtataaaacacaacctaaa 240  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14983412 aagtagttaaaaattactgtggagcatcattcagcaatttaacctcatgataattgtctataaaagaaggaatatatggtagtataaaacacaacctaaa 14983511  T
Q  241 aatattcttcatttattttgatggccccattcagcacatgataaattaattaatgtgaataaaatgtgaataatgatagttttattcaattaattaatgt 340  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||    
T  14983512 aatattcttcatttattttgatggggccattcagcacatgataaattaatt-----------aatgtgaataatgatagttttattcaattaattaatgt 14983600  T
Q  341 ctgcattgaatttaagtaaggaatcatattaaaaatgttgacgtcgaagataacacacatttctccattgaagattcccaccattaatttcttttcaatg 440  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14983601 agacattgaatttaagtaaggaatcatattaaaaatgttgacatcgaagataacacacatttctccatt-aagattcccaccattaatttcttttcaatg 14983699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 21646935 - 21647004
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||| |||||||||||| |||||||||||||||||    
T  21646935 caactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgta 21647004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 16408767 - 16408698
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  16408767 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 16408698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 47528692 - 47528623
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| |||||||||||| |||||||||||||||||    
T  47528692 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta 47528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 40915802 - 40915869
Alignment:
Q  465 actggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||| |||||||||||||||| | |||| |||  |||||||||||| |||||||||||||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgta 40915869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 5648230 - 5648299
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  5648230 caactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgta 5648299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 11054310 - 11054241
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  ||||||||||||||||||| ||||||||||    
T  11054310 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgta 11054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 48598987 - 48598918
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  48598987 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 48598918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 44363294 - 44363227
Alignment:
Q  465 actggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||| ||||||||||||||||   |||| |||  ||||||||||||||||||||||| ||||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgta 44363227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 5306827 - 5306758
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||| |||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  5306827 caactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 5306758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 6430789 - 6430720
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  ||||||||| || |||||||||||||||||    
T  6430789 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgta 6430720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 10660375 - 10660444
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   ||||  |||||||||||||||| ||||| |||||| ||||    
T  10660375 caactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgta 10660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 10874520 - 10874589
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   ||||  |||||||||||||||| ||||| |||||| ||||    
T  10874520 caactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgta 10874589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 16911533 - 16911602
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||  |||||||||||||||||    
T  16911533 caactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgta 16911602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 54730225 - 54730289
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| |||||||||||||||| | |||| |||  |||||||||||  |||||||||||||||||    
T  54730225 ggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgta 54730289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 532
Target Start/End: Complemental strand, 17043547 - 17043489
Alignment:
Q  474 gttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||   |||| |||| |||||||||||| |||||||||||||||||    
T  17043547 gttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta 17043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 532
Target Start/End: Complemental strand, 49938743 - 49938685
Alignment:
Q  474 gttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||   |||| |||| |||||||||||| |||||||||||||||||    
T  49938743 gttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta 49938685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 9832435 - 9832406
Alignment:
Q  503 gttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||||||||||||||||||||||||    
T  9832435 gttcaagtcctgaaaacagcctcttgtgta 9832406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 20224955 - 20225024
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| ||   |||||||||||| ||||| |||||||||||    
T  20224955 caactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgta 20225024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 30639351 - 30639420
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||| ||||||   |||| |||  |||||||||||| |||||| ||||||||||    
T  30639351 caactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgta 30639420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 37494822 - 37494891
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||| |||| |||   |||| |||| |||||||||||| ||||| |||||||||||    
T  37494822 caactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgta 37494891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 531
Target Start/End: Complemental strand, 8473784 - 8473716
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgt 531  Q
    |||||||||| ||||||||||| ||||  |||||   |  |||||||||||| ||||||||||||||||    
T  8473784 caactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt 8473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 54966997 - 54967061
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| ||||||||||||||||   |||| ||||||||||||| ||| ||| | |||||||||||    
T  54966997 ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgta 54967061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 460 - 532
Target Start/End: Original strand, 25250490 - 25250562
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||| ||||||||| |||||||    
T  25250490 gcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgta 25250562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 6760793 - 6760862
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||| |||| |||||| |||  |||||||||||| |||||||||||||||||    
T  6760793 caactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgta 6760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 532
Target Start/End: Original strand, 17823527 - 17823616
Alignment:
Q  443 tttgaggtgtaatctctgcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||| |||||||  || |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  17823527 tttgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 17823616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 28407387 - 28407456
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  28407387 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 28407456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 28817790 - 28817721
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  28817790 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 28817721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 36720768 - 36720836
Alignment:
Q  464 aactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  36720768 aactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 36720836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 12670412 - 12670343
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  12670412 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 12670343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 20869660 - 20869591
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  20869660 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 20869591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 26954107 - 26954172
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| |||||||||||||||  |||||| |||  |||||||||||| |||||||||||||||||    
T  26954107 tggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgta 26954172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 30454259 - 30454190
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  30454259 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 30454190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 532
Target Start/End: Original strand, 13160655 - 13160742
Alignment:
Q  445 tgaggtgtaatctctgcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| |||| ||| || |||||||||| ||||||||||||||||   |||| |||  |||||||||||  |||||||||||||||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgta 13160742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 2626494 - 2626559
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  2626494 tggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 2626559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 7136693 - 7136624
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| ||   |||||||||||| ||||| |||||||||||    
T  7136693 caactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgta 7136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 35261650 - 35261719
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  ||||||| |||| |||||| ||||||||||    
T  35261650 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgta 35261719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 39461160 - 39461091
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||||||| |||   |||| |||  |||||||||||| |||||||||||||||||    
T  39461160 caactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 39461091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 44530120 - 44530189
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||| ||||||||||| |||||| |||  ||||||||| || ||||| |||||||||||    
T  44530120 caactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgta 44530189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 532
Target Start/End: Complemental strand, 18164942 - 18164854
Alignment:
Q  444 ttgaggtgtaatctctgcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| |||||||  || |||| ||| | ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  18164942 ttgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 18164854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 20284237 - 20284171
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||| ||||| ||||||||||||||||   |||| |||  |||||||||||| ||||||||||||||    
T  20284237 caacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 20284171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 21070866 - 21070800
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||| ||||| ||||||||||||||||   |||| |||  |||||||||||| ||||||||||||||    
T  21070866 caacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 21070800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 29521849 - 29521783
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||||| ||| ||||||||| ||||||  ||||| |||  |||||||||||| ||||||||||||||    
T  29521849 caactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgt 29521783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 532
Target Start/End: Complemental strand, 8897931 - 8897859
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||||||| ||||||||||||||||   |||| |||  ||| |||||||| ||||| || ||||||||    
T  8897931 gcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgta 8897859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 32758232 - 32758301
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| |||||||||||| |||||||||||||||||    
T  32758232 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta 32758301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 42805496 - 42805564
Alignment:
Q  464 aactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  42805496 aactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 42805564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 11617752 - 11617683
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| |||||||||||| ||||| |||||||||||    
T  11617752 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgta 11617683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 18327005 - 18327074
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||| | |||||||||||||||||    
T  18327005 caactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgta 18327074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 19427053 - 19426984
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  19427053 caactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 19426984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 460 - 532
Target Start/End: Original strand, 47716427 - 47716499
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| || ||||||| ||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  47716427 gcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 47716499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 2541184 - 2541114
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaa-ggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||| || |||  |||||||||||| |||||||||||||||||    
T  2541184 caactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 2541114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 7794670 - 7794601
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||| |||||||  ||||| |||  |||||||||||| |||||||||||| ||||    
T  7794670 caactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgta 7794601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 10693235 - 10693166
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| |||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  10693235 caactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 10693166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 21172171 - 21172102
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||| ||   |||| |||  |||||||||||| |||||||||||||||||    
T  21172171 caactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 21172102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 27629605 - 27629674
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||| ||||   |||| |||  |||||||||||| |||||||||||||||||    
T  27629605 caactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 27629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 34626371 - 34626302
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||||||||||    |||||||||  ||||||||||| |||||||||| ||||||    
T  34626371 caactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgta 34626302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 42798640 - 42798709
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  ||||||||| || |||||| ||||||||||    
T  42798640 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgta 42798709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 43557443 - 43557512
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| ||   |||||||||||| |||||||||||||||||    
T  43557443 caactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgta 43557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 46354165 - 46354234
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||||||||||   ||||| |||  |||||||||||| ||||| |||||||||||    
T  46354165 caactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgta 46354234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 47078017 - 47077948
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||| ||||||||||    
T  47078017 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgta 47077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 23419833 - 23419769
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| |||| ||||||||||| | |||| |||| |||||||| ||| |||||||||||||||||    
T  23419833 ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgta 23419769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 531
Target Start/End: Complemental strand, 8149113 - 8149042
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgt 531  Q
    ||||||||||||| ||||||||||||||||   || | |||  |||||||||||||||||  ||||||||||    
T  8149113 gcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgt 8149042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 521
Target Start/End: Complemental strand, 35334978 - 35334920
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacag 521  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||||||    
T  35334978 caactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacag 35334920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 42495999 - 42495933
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||||||||| ||||||||||| ||||   |||| |||  |||||||||||| ||||||||||||||    
T  42495999 caactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 42495933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 42476845 - 42476913
Alignment:
Q  464 aactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||| |||||||||||||||| | |||| |||   ||||||| ||| |||||| ||||||||||    
T  42476845 aactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgta 42476913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 41014290 - 41014359
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  41014290 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 41014359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 4619270 - 4619201
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||| |||||||||||||    
T  4619270 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgta 4619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 24448861 - 24448930
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||||||||| |||||||    
T  24448861 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgta 24448930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 37024718 - 37024649
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  37024718 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 37024649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 529
Target Start/End: Original strand, 38879552 - 38879618
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| ||||||||||||||    
T  38879552 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 38879618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 8170146 - 8170077
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| ||||||||| |||||||    
T  8170146 caactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgta 8170077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 27328727 - 27328792
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| ||||||||||||||||   |||| |||| |||||||||||| |||||| ||||||||||    
T  27328727 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgta 27328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 35710284 - 35710353
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||| ||   |||| |||  |||||||||||| |||||||||||||||||    
T  35710284 caactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 35710353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 43334173 - 43334242
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||| ||||||    
T  43334173 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgta 43334242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 209086 - 209022
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| |||||||||||||||| | |||| |||| ||||||||||||  |||| |||||||||||    
T  209086 ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgta 209022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 23974756 - 23974820
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| ||||||||||||||||  ||||| |||  |||||||||||| ||||| |||||||||||    
T  23974756 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgta 23974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 532
Target Start/End: Complemental strand, 19143094 - 19143037
Alignment:
Q  475 ttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||| ||||| | || |||||| |||||||||||| ||||| |||||||||||    
T  19143094 ttgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgta 19143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 527
Target Start/End: Original strand, 1405170 - 1405222
Alignment:
Q  475 ttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctctt 527  Q
    ||||||||||||||| |||||| |||  |||||||||||| ||||| ||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctctt 1405222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 13730768 - 13730699
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  13730768 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 13730699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 52926374 - 52926305
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  52926374 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 4495828 - 4495759
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||||||| ||||| |||||||    
T  4495828 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgta 4495759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 7697049 - 7696980
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||||||||||| | |||| |||  |||||||||||| |||||| ||||||||||    
T  7697049 caactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgta 7696980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 8247853 - 8247784
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  8247853 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 8247784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 10870115 - 10870046
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  10870115 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 10870046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 12914199 - 12914130
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||| |||||||   |||| |||| |||||||||||| |||||||||||||||||    
T  12914199 caactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgta 12914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 26869700 - 26869769
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| |||||||||||| ||||||||||| |||||    
T  26869700 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgta 26869769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 464 - 529
Target Start/End: Complemental strand, 29366885 - 29366820
Alignment:
Q  464 aactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    ||||||||| |||||||||||||||| | |||| |||  |||||||||||| ||||||||||||||    
T  29366885 aactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgt 29366820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 46421201 - 46421132
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  46421201 caactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 46421132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 460 - 532
Target Start/End: Original strand, 39203506 - 39203578
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||| |||| ||||||||||||||||   |||| |||| |||||||||||  |||||||||||||||||    
T  39203506 gcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgta 39203578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 532
Target Start/End: Complemental strand, 13628960 - 13628887
Alignment:
Q  460 gcacaactggtaag-gttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||||||  ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  13628960 gcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 13628887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 40272976 - 40272907
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| ||   |||||||||||| ||||| |||||||||||    
T  40272976 caactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgta 40272907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 531
Target Start/End: Original strand, 53062036 - 53062099
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgt 531  Q
    ||||| ||||||||||||||||   |||| ||| ||||||||||||| |||||||||| |||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgt 53062099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 1217083 - 1217152
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||| ||||||| ||   |||| |||  |||||||||||| |||||||||||||||||    
T  1217083 caactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 1217152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 8455480 - 8455411
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| |||||||||||||||||    
T  8455480 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 8455411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 17705466 - 17705535
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||||||||||| |||||| |||  |||||||||||| |||| ||||||||||||    
T  17705466 caactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgta 17705535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 11514407 - 11514476
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||| ||||| |||||||||||||||||    
T  11514407 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgta 11514476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 12024082 - 12024013
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  12024082 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 12024013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 44604826 - 44604894
Alignment:
Q  464 aactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| ||| ||||||||||||||||  ||||| |||| |||||||||||| ||||| |||||||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgta 44604894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 461 - 532
Target Start/End: Original strand, 17667971 - 17668042
Alignment:
Q  461 cacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||| | |||||||||||    
T  17667971 cacaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgta 17668042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 529
Target Start/End: Original strand, 14530289 - 14530355
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| ||||||||||||||    
T  14530289 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 14530355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 23397737 - 23397806
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| ||   |||||||||||| |||||||||||||||||    
T  23397737 caactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgta 23397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 24200789 - 24200720
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   || | |||  |||||||||||| |||||||||||||||||    
T  24200789 caactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgta 24200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 532
Target Start/End: Original strand, 17623532 - 17623604
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||||||| |||||||||||| |||  ||||| |||  |||||||||||  ||||| |||||||||||    
T  17623532 gcacaactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgta 17623604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 525
Target Start/End: Original strand, 22371028 - 22371090
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctc 525  Q
    |||||||||| ||||||||||||||||  | ||| |||  |||||||||||| ||||||||||    
T  22371028 caactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc 22371090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 10543669 - 10543738
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| ||| ||||||||||||||||   |||| |||  |||||||||||| |||| ||||||||||||    
T  10543669 caactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgta 10543738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 21779423 - 21779354
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||| | ||||||||||||||||   |||| |||  |||||||||||| | |||||||||||||||    
T  21779423 caactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgta 21779354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 25079882 - 25079813
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  ||||||||| |  ||||| |||||||||||    
T  25079882 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgta 25079813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 532
Target Start/End: Original strand, 7214502 - 7214574
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||||||| ||||||||||||||||   |||| ||   ||||||||| || |||||| ||||||||||    
T  7214502 gcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgta 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 10212 - 10143
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  10212 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 10143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 20540 - 20471
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  20540 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 20471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 30550 - 30619
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  30550 caactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgta 30619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 1354919 - 1354850
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  1354919 caactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgta 1354850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 9161099 - 9161163
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| ||||||||||||||||   |||| |||| |||||||||||| |||||||||||||||||    
T  9161099 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta 9161163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 1346935 - 1347004
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||| ||||||||    
T  1346935 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgta 1347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 12222081 - 12222012
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  ||||||||| || |||||||||||||||||    
T  12222081 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgta 12222012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 14553483 - 14553551
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| |||||||||||||||| | |||| |||| |||||||||||| ||| ||| |||||||||    
T  14553483 caactggtaaagttgttgtcatgtgacta-aaggtcacaggttcaagtcctggaaatagcttcttgtgta 14553551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 14975244 - 14975175
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||| ||||| ||||||||||||||||  ||||| |||   ||||||||||| |||||||||||||||||    
T  14975244 caaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgta 14975175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 532
Target Start/End: Complemental strand, 29356009 - 29355952
Alignment:
Q  475 ttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 29355952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 18944637 - 18944706
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| ||||||| |||| |||||||||||||||||    
T  18944637 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgta 18944706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 20004256 - 20004187
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||||||||||| |||||    
T  20004256 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgta 20004187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 23768484 - 23768415
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| ||||||||| || |||||||||||||||||    
T  23768484 caactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgta 23768415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 30395892 - 30395823
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  30395892 caactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgta 30395823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 34725260 - 34725191
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  34725260 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 34725191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 45812699 - 45812630
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| ||| ||||||||||||||||   |||| |||| ||||||||||||||||||| ||||||||||    
T  45812699 caactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgta 45812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 46991798 - 46991867
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||||| |||||||||||    
T  46991798 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgta 46991867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 6925096 - 6925163
Alignment:
Q  465 actggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||| ||||||||||||||||  ||||| |||  |||||||||||| ||| |||||||||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgta 6925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 461 - 532
Target Start/End: Complemental strand, 41319972 - 41319901
Alignment:
Q  461 cacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||||| ||||||||||||||||   |||| |||| ||| |||||||| |||||| ||||||||||    
T  41319972 cacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgta 41319901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 521
Target Start/End: Complemental strand, 14988083 - 14988025
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacag 521  Q
    |||||||||| ||||||||||| |||| |||| | |||| |||||||||||||||||||    
T  14988083 caactggtaaagttgttgtcatatgactagaaagtcacaagttcaagtcctgaaaacag 14988025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 14617032 - 14617101
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||| ||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  14617032 caaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgta 14617101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 532
Target Start/End: Complemental strand, 25554882 - 25554817
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| |||||||||| ||||| | |||||||| |||| |||||||| ||||| |||||||||||    
T  25554882 tggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgta 25554817  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 27474275 - 27474344
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| |||| ||||||||| || |||||| ||||||||||    
T  27474275 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgta 27474344  T

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Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 32632720 - 32632651
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||| ||||   |||| |||  |||||||||||| |||||||||||||||||    
T  32632720 caactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 32632651  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 45402089 - 45402157
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||| | |||||  ||  |||||||||||| |||||||||||||||||    
T  45402089 caactggtaaagttgttgtcatgtgatg-gaaggtaacgggttcaagtcctggaaacagcctcttgtgta 45402157  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 18724704 - 18724640
Alignment:
Q  468 ggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||||||    
T  18724704 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta 18724640  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 532
Target Start/End: Original strand, 21723655 - 21723726
Alignment:
Q  460 gcacaactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    ||||||||||||| ||||||||||||||||  || ||  ||| |||| ||||||| |||||||||||||||||    
T  21723655 gcacaactggtaaagttgttgtcatgtgactggatggttacaagttc-agtcctggaaacagcctcttgtgta 21723726  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 529
Target Start/End: Original strand, 47214505 - 47214571
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgt 529  Q
    |||||||||| ||||||||||||||||   |||| |||  |||||||||||| |||||| |||||||    
T  47214505 caactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt 47214571  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 533
Target Start/End: Complemental strand, 50760350 - 50760320
Alignment:
Q  503 gttcaagtcctgaaaacagcctcttgtgtat 533  Q
    |||||||||||||||||||||||||||||||    
T  50760350 gttcaagtcctgaaaacagcctcttgtgtat 50760320  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 22930231 - 22930162
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   |||| ||   |||||||||||| ||||||||| |||||||    
T  22930231 caactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgta 22930162  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 46248117 - 46248048
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||   || | |||  ||||||||| || |||||||||||||||||    
T  46248117 caactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgta 46248048  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 27201645 - 27201709
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgt 531  Q
    |||||| ||||||||||||||||   |||| ||   |||||||||||| ||||||||||||||||    
T  27201645 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt 27201709  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 10781 - 10850
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||||||| ||||||||||||||||  ||||| |||  |||||||  ||||||||| |||||||||||    
T  10781 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgta 10850  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 46806 - 46871
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| |||||||||||||||| |||||| |||  |||||||| ||| ||||| |||||||||||    
T  46806 tggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgta 46871  T

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Target: scaffold1176 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 532
Target Start/End: Complemental strand, 1745 - 1680
Alignment:
Q  467 tggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttgtgta 532  Q
    |||||| ||||||||||||||||   |||| ||   |||||||||||||||||| |||||||||||    
T  1745 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgta 1680  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 528
Target Start/End: Complemental strand, 13187 - 13122
Alignment:
Q  463 caactggtaaggttgttgtcatgtgacgagaaggccacatgttcaagtcctgaaaacagcctcttg 528  Q
    |||| ||||| ||||||||||||||||   |||| |||  |||||||||||| |||||||||||||    
T  13187 caaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttg 13122  T

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