View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19956_low_12 (Length: 291)
Name: NF19956_low_12
Description: NF19956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19956_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 42 - 282
Target Start/End: Complemental strand, 7353130 - 7352890
Alignment:
| Q |
42 |
tatattaatataagtttacctgaaaatgtgtttcttgtttatgcatcatttcatgaaccaacttcttcataagagtaacttcaaccattaatgattcaag |
141 |
Q |
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| T |
7353130 |
tatattaatataagtttacctgaaaatgtgtttcttgtttatgcatcatttcatgaaccaacttcttcataagagttacttcaaccattaatgattcaag |
7353031 |
T |
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| Q |
142 |
tttgatttctttaccaccaatccctccagcttgattctccatcgtcacaaaacgaccactaatggcatcatcttcatccatgttcatgtttctgcaaaca |
241 |
Q |
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| T |
7353030 |
tttgatttctttaccaccaatccctccagcttgattctccatcgtcacaaaacgaccactaatggcatcatcttcatccatgttcatgtttctgtaaaca |
7352931 |
T |
|
| Q |
242 |
tcatatgtatttattaacaagtaactaatgcatgatatttt |
282 |
Q |
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| T |
7352930 |
tcatatgtatttattaacaagtaactaatgcatgatatttt |
7352890 |
T |
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