View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19957_low_3 (Length: 671)

Name: NF19957_low_3
Description: NF19957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19957_low_3
NF19957_low_3
[»] chr4 (53 HSPs)
chr4 (17-222)||(39921760-39921965)
chr4 (17-229)||(43779520-43779732)
chr4 (17-229)||(39083898-39084110)
chr4 (17-229)||(42880414-42880626)
chr4 (17-229)||(44993940-44994152)
chr4 (278-488)||(39083638-39083849)
chr4 (278-488)||(39921493-39921704)
chr4 (278-487)||(43779781-43779991)
chr4 (17-229)||(5484799-5485010)
chr4 (278-487)||(5484540-5484750)
chr4 (19-229)||(32652358-32652568)
chr4 (282-486)||(39189383-39189588)
chr4 (278-487)||(44994201-44994411)
chr4 (278-482)||(32652104-32652309)
chr4 (278-487)||(42880675-42880879)
chr4 (136-229)||(39189641-39189734)
chr4 (396-487)||(5486051-5486143)
chr4 (383-488)||(44558512-44558618)
chr4 (17-64)||(39189730-39189777)
chr4 (365-486)||(6999268-6999390)
chr4 (326-448)||(13450943-13451064)
chr4 (364-445)||(15450383-15450464)
chr4 (358-449)||(43519463-43519554)
chr4 (383-488)||(10372725-10372831)
chr4 (364-446)||(32653598-32653680)
chr4 (19-143)||(13450638-13450762)
chr4 (396-487)||(39923006-39923098)
chr4 (383-488)||(10762580-10762686)
chr4 (351-449)||(41761733-41761831)
chr4 (415-487)||(2350558-2350631)
chr4 (383-487)||(44794779-44794884)
chr4 (383-487)||(47941811-47941916)
chr4 (365-449)||(25995080-25995164)
chr4 (396-487)||(35997766-35997858)
chr4 (288-350)||(4519535-4519597)
chr4 (396-489)||(44792932-44793026)
chr4 (396-489)||(44992806-44992900)
chr4 (75-148)||(25993871-25993944)
chr4 (396-488)||(42879274-42879367)
chr4 (286-350)||(11255841-11255905)
chr4 (397-487)||(13450304-13450395)
chr4 (365-487)||(35996063-35996186)
chr4 (77-148)||(41355919-41355990)
chr4 (399-449)||(833262-833312)
chr4 (399-449)||(4173740-4173790)
chr4 (399-449)||(5439647-5439697)
chr4 (399-449)||(43507206-43507256)
chr4 (399-449)||(43508653-43508703)
chr4 (286-339)||(27382287-27382340)
chr4 (396-488)||(39085151-39085244)
chr4 (286-347)||(51012087-51012148)
chr4 (396-487)||(2828410-2828502)
chr4 (396-487)||(10371057-10371149)
[»] chr6 (27 HSPs)
chr6 (17-222)||(17951695-17951900)
chr6 (278-488)||(17951956-17952167)
chr6 (17-224)||(35175517-35175723)
chr6 (282-487)||(35175781-35175987)
chr6 (22-229)||(34344065-34344272)
chr6 (320-401)||(34343922-34344003)
chr6 (351-446)||(13613569-13613664)
chr6 (399-496)||(4641345-4641444)
chr6 (386-487)||(24662480-24662582)
chr6 (396-487)||(17950561-17950653)
chr6 (354-449)||(3456787-3456882)
chr6 (364-447)||(34345291-34345374)
chr6 (383-472)||(3018451-3018541)
chr6 (364-446)||(4289460-4289542)
chr6 (383-487)||(2968139-2968244)
chr6 (383-487)||(29077328-29077433)
chr6 (354-442)||(32455881-32455969)
chr6 (352-446)||(32439079-32439173)
chr6 (383-487)||(29112300-29112405)
chr6 (428-487)||(3018527-3018587)
chr6 (351-446)||(10568441-10568536)
chr6 (351-446)||(20523408-20523503)
chr6 (429-487)||(30639611-30639670)
chr6 (399-449)||(3480657-3480707)
chr6 (351-425)||(9398723-9398797)
chr6 (286-347)||(9398822-9398883)
chr6 (415-490)||(35174388-35174464)
[»] chr8 (37 HSPs)
chr8 (17-229)||(40020288-40020500)
chr8 (278-487)||(40020549-40020759)
chr8 (22-229)||(28433373-28433580)
chr8 (278-481)||(28433630-28433834)
chr8 (356-449)||(27691193-27691286)
chr8 (383-487)||(31201162-31201267)
chr8 (364-478)||(23811532-23811647)
chr8 (365-491)||(42897775-42897902)
chr8 (351-449)||(8609794-8609892)
chr8 (351-448)||(26242321-26242418)
chr8 (351-445)||(13108343-13108437)
chr8 (351-449)||(13282517-13282615)
chr8 (351-449)||(38547267-38547365)
chr8 (354-442)||(33708814-33708902)
chr8 (396-490)||(31823475-31823570)
chr8 (399-449)||(29239187-29239237)
chr8 (399-449)||(33762713-33762763)
chr8 (364-488)||(9184382-9184507)
chr8 (396-488)||(31199484-31199577)
chr8 (286-350)||(13108258-13108322)
chr8 (365-488)||(31821417-31821541)
chr8 (396-487)||(33748332-33748424)
chr8 (286-350)||(38547386-38547450)
chr8 (365-487)||(1320617-1320740)
chr8 (369-432)||(12515140-12515203)
chr8 (354-425)||(27406907-27406978)
chr8 (399-442)||(33707252-33707295)
chr8 (399-449)||(601704-601754)
chr8 (354-424)||(15305861-15305931)
chr8 (354-424)||(15486230-15486300)
chr8 (383-488)||(32822360-32822466)
chr8 (351-449)||(41042591-41042689)
chr8 (286-347)||(5036611-5036672)
chr8 (399-448)||(33761109-33761158)
chr8 (396-488)||(40019155-40019248)
chr8 (286-350)||(8609709-8609773)
chr8 (364-416)||(28432293-28432345)
[»] chr7 (45 HSPs)
chr7 (278-489)||(45463668-45463880)
chr7 (17-229)||(45463929-45464141)
chr7 (278-487)||(4322486-4322696)
chr7 (17-229)||(4322231-4322437)
chr7 (19-229)||(48303307-48303514)
chr7 (21-229)||(34691254-34691462)
chr7 (278-487)||(48303563-48303773)
chr7 (278-487)||(34690995-34691205)
chr7 (406-486)||(30109708-30109789)
chr7 (365-493)||(46996703-46996832)
chr7 (397-491)||(47341719-47341814)
chr7 (364-446)||(34692715-34692797)
chr7 (364-448)||(48302191-48302275)
chr7 (396-490)||(4321035-4321130)
chr7 (354-449)||(27666055-27666150)
chr7 (386-487)||(38613503-38613605)
chr7 (354-439)||(29996504-29996589)
chr7 (383-487)||(35344309-35344414)
chr7 (365-429)||(34785080-34785144)
chr7 (354-449)||(20478081-20478176)
chr7 (288-347)||(38613625-38613684)
chr7 (352-442)||(56376-56466)
chr7 (365-423)||(11682846-11682904)
chr7 (396-488)||(8421415-8421508)
chr7 (399-487)||(8423316-8423405)
chr7 (396-488)||(46994659-46994752)
chr7 (396-487)||(30108565-30108657)
chr7 (365-488)||(33038798-33038922)
chr7 (396-485)||(46810707-46810797)
chr7 (383-487)||(46812601-46812706)
chr7 (396-487)||(40785547-40785639)
chr7 (351-410)||(1546365-1546424)
chr7 (288-347)||(2167641-2167700)
chr7 (351-438)||(6602385-6602472)
chr7 (353-448)||(37796170-37796265)
chr7 (399-449)||(20479719-20479769)
chr7 (351-449)||(24228396-24228494)
chr7 (351-449)||(34776902-34777000)
chr7 (399-449)||(35403619-35403669)
chr7 (351-449)||(39859216-39859314)
chr7 (396-430)||(48704268-48704302)
chr7 (396-491)||(23955284-23955380)
chr7 (396-487)||(35342425-35342517)
chr7 (286-350)||(39859130-39859194)
chr7 (396-487)||(45465183-45465275)
[»] chr2 (42 HSPs)
chr2 (17-229)||(11022666-11022878)
chr2 (278-483)||(11022927-11023132)
chr2 (278-487)||(28246663-28246873)
chr2 (17-229)||(28246922-28247134)
chr2 (24-229)||(38148755-38148960)
chr2 (278-489)||(38148493-38148706)
chr2 (545-652)||(43984611-43984718)
chr2 (493-547)||(43984528-43984582)
chr2 (286-449)||(11315258-11315420)
chr2 (383-487)||(37417273-37417378)
chr2 (399-488)||(41144-41234)
chr2 (383-488)||(15372498-15372604)
chr2 (351-449)||(39664755-39664853)
chr2 (396-487)||(11021533-11021625)
chr2 (365-487)||(29909661-29909784)
chr2 (399-483)||(39560-39645)
chr2 (396-488)||(28248174-28248267)
chr2 (368-449)||(38149986-38150066)
chr2 (351-448)||(40560263-40560360)
chr2 (383-487)||(41706539-41706644)
chr2 (351-487)||(7744043-7744180)
chr2 (399-449)||(14387388-14387438)
chr2 (351-441)||(17946141-17946231)
chr2 (363-449)||(24208061-24208147)
chr2 (354-424)||(37020572-37020642)
chr2 (396-487)||(33193-33285)
chr2 (79-143)||(11315034-11315098)
chr2 (396-487)||(41708429-41708521)
chr2 (354-449)||(6785991-6786086)
chr2 (383-446)||(10716900-10716963)
chr2 (363-446)||(16763118-16763201)
chr2 (399-449)||(16764611-16764661)
chr2 (351-449)||(19908253-19908351)
chr2 (399-449)||(24205637-24205687)
chr2 (397-486)||(25619661-25619751)
chr2 (366-448)||(26584819-26584901)
chr2 (351-449)||(44709752-44709850)
chr2 (383-487)||(15432328-15432433)
chr2 (415-487)||(42880829-42880902)
chr2 (286-347)||(44709666-44709727)
chr2 (286-350)||(19908167-19908231)
chr2 (399-447)||(37022185-37022233)
[»] chr5 (35 HSPs)
chr5 (17-229)||(42620416-42620628)
chr5 (278-492)||(42620677-42620892)
chr5 (383-488)||(38596867-38596973)
chr5 (364-487)||(1344781-1344905)
chr5 (365-487)||(18728603-18728726)
chr5 (354-449)||(29621771-29621866)
chr5 (365-487)||(35395333-35395456)
chr5 (396-490)||(40330514-40330609)
chr5 (365-495)||(43318061-43318192)
chr5 (351-449)||(17574357-17574455)
chr5 (359-449)||(24541206-24541297)
chr5 (354-449)||(42473597-42473692)
chr5 (396-489)||(32089924-32090018)
chr5 (364-445)||(1343264-1343345)
chr5 (365-489)||(32087512-32087637)
chr5 (399-487)||(32835876-32835965)
chr5 (396-472)||(38176647-38176724)
chr5 (396-472)||(38203871-38203948)
chr5 (358-442)||(2854321-2854404)
chr5 (354-442)||(40780596-40780684)
chr5 (354-449)||(36057603-36057698)
chr5 (353-487)||(35292371-35292505)
chr5 (351-447)||(7267884-7267980)
chr5 (286-350)||(17574476-17574540)
chr5 (396-479)||(33257759-33257843)
chr5 (396-491)||(35291044-35291140)
chr5 (396-487)||(42619289-42619381)
chr5 (291-350)||(18728508-18728567)
chr5 (351-446)||(30468267-30468362)
chr5 (396-489)||(18726563-18726657)
chr5 (351-449)||(34327674-34327772)
chr5 (383-488)||(38178112-38178218)
chr5 (383-488)||(38205336-38205442)
chr5 (399-449)||(40782211-40782261)
chr5 (286-347)||(7268004-7268065)
[»] chr1 (38 HSPs)
chr1 (278-487)||(5783364-5783574)
chr1 (45-229)||(5783623-5783807)
chr1 (354-449)||(9121658-9121753)
chr1 (354-439)||(46583546-46583631)
chr1 (354-449)||(4855956-4856051)
chr1 (365-487)||(42134482-42134605)
chr1 (352-442)||(33602632-33602722)
chr1 (351-449)||(34778125-34778223)
chr1 (383-490)||(47269475-47269583)
chr1 (397-447)||(34041828-34041878)
chr1 (383-488)||(36895529-36895635)
chr1 (386-487)||(44157433-44157535)
chr1 (396-488)||(11152544-11152637)
chr1 (383-487)||(27940608-27940713)
chr1 (396-488)||(31803699-31803792)
chr1 (365-489)||(46638808-46638933)
chr1 (396-487)||(5784866-5784958)
chr1 (396-487)||(45379085-45379177)
chr1 (354-442)||(47013072-47013160)
chr1 (397-448)||(25173031-25173082)
chr1 (351-449)||(6818665-6818763)
chr1 (399-449)||(34776608-34776658)
chr1 (383-487)||(18183962-18184067)
chr1 (396-479)||(27952499-27952583)
chr1 (351-423)||(51121970-51122042)
chr1 (399-449)||(8169568-8169618)
chr1 (351-449)||(31238482-31238580)
chr1 (399-449)||(46582049-46582099)
chr1 (351-448)||(15104481-15104578)
chr1 (415-487)||(33685299-33685372)
chr1 (286-347)||(34778040-34778101)
chr1 (399-487)||(35478087-35478176)
chr1 (383-487)||(35479994-35480099)
chr1 (286-347)||(37344504-37344565)
chr1 (286-350)||(15104600-15104664)
chr1 (287-347)||(18183846-18183906)
chr1 (286-350)||(27087441-27087505)
chr1 (396-487)||(33679259-33679351)
[»] chr3 (47 HSPs)
chr3 (23-229)||(41944833-41945039)
chr3 (278-487)||(41944576-41944784)
chr3 (383-489)||(23774150-23774257)
chr3 (352-490)||(40508899-40509038)
chr3 (19-148)||(26448923-26449052)
chr3 (365-489)||(48633875-48634000)
chr3 (354-449)||(3152228-3152323)
chr3 (354-449)||(44794246-44794341)
chr3 (364-446)||(41946066-41946148)
chr3 (354-447)||(2660253-2660346)
chr3 (365-449)||(30501156-30501240)
chr3 (368-487)||(40963369-40963489)
chr3 (351-449)||(53190766-53190864)
chr3 (364-487)||(23888772-23888896)
chr3 (396-487)||(48635372-48635464)
chr3 (383-495)||(33113199-33113312)
chr3 (383-487)||(41021022-41021127)
chr3 (396-491)||(33111837-33111933)
chr3 (396-487)||(40508493-40508585)
chr3 (362-449)||(41977789-41977876)
chr3 (352-442)||(19987602-19987692)
chr3 (351-449)||(21348762-21348860)
chr3 (351-449)||(27899088-27899186)
chr3 (387-487)||(18430294-18430395)
chr3 (365-489)||(45898349-45898474)
chr3 (286-350)||(2226074-2226138)
chr3 (396-487)||(33850982-33851074)
chr3 (352-487)||(45257208-45257344)
chr3 (396-487)||(45897050-45897142)
chr3 (397-487)||(26447723-26447814)
chr3 (351-446)||(35905719-35905814)
chr3 (397-487)||(51454283-51454374)
chr3 (351-446)||(54898479-54898574)
chr3 (396-489)||(1847644-1847738)
chr3 (351-449)||(30599925-30600023)
chr3 (399-449)||(38191934-38191984)
chr3 (399-449)||(38193510-38193560)
chr3 (399-449)||(41979352-41979402)
chr3 (399-449)||(46308846-46308896)
chr3 (399-449)||(53094273-53094323)
chr3 (286-347)||(7884795-7884856)
chr3 (351-448)||(51684650-51684747)
chr3 (286-347)||(53190681-53190742)
chr3 (396-487)||(23887198-23887290)
chr3 (365-488)||(24382894-24383018)
chr3 (286-350)||(30599839-30599903)
chr3 (287-339)||(33113083-33113135)
[»] scaffold0058 (2 HSPs)
scaffold0058 (354-449)||(3333-3428)
scaffold0058 (354-449)||(4505-4600)
[»] scaffold0477 (1 HSPs)
scaffold0477 (399-496)||(6669-6768)
[»] scaffold1454 (2 HSPs)
scaffold1454 (351-445)||(1306-1400)
scaffold1454 (286-350)||(1421-1485)


Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 39921965 - 39921760
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39921965 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 39921866  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39921865 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 39921766  T
Q  217 caaaca 222  Q
    ||||||    
T  39921765 caaaca 39921760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 43779520 - 43779732
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43779520 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaatcttgatcgccgg 43779619  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43779620 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 43779719  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  43779720 caaacataggggt 43779732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 39084110 - 39083898
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39084110 atatgggcgaaaatgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 39084011  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39084010 agaggatgatgatcttggagaagtgaaaatggagggaagaaaaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 39083911  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  39083910 caaacataggggt 39083898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 42880414 - 42880626
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42880414 atatgggcgaaaatgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaatcttgatcgccgg 42880513  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42880514 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagaaagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 42880613  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  42880614 caaacataggggt 42880626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 44993940 - 44994152
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44993940 atataggcgaaaacgaacggagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaatcttgatcgccgg 44994039  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44994040 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 44994139  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  44994140 caaacataggggt 44994152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 488
Target Start/End: Complemental strand, 39083849 - 39083638
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39083849 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaacacactaacggaccttttggacggaggga 39083750  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  39083749 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattg 39083650  T
Q  477 atggttcactca 488  Q
    ||||||||||||    
T  39083649 atggttcactca 39083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 278 - 488
Target Start/End: Complemental strand, 39921704 - 39921493
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39921704 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacatgtacaagccaacacagcacactaacggaccttttggacggaggga 39921605  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  39921604 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattg 39921505  T
Q  477 atggttcactca 488  Q
    ||||||||||||    
T  39921504 atggttcactca 39921493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 278 - 487
Target Start/End: Original strand, 43779781 - 43779991
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43779781 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 43779880  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  43779881 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattg 43779980  T
Q  477 atggttcactc 487  Q
    | |||||||||    
T  43779981 aaggttcactc 43779991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 5485010 - 5484799
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  5485010 atatgggc-aaaacgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccga 5484912  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5484911 agaggaagatgatcttggagaagtgaaaatggagggaagaagaacagacatggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 5484812  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  5484811 caaacataggggt 5484799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 278 - 487
Target Start/End: Complemental strand, 5484750 - 5484540
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5484750 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 5484651  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||| |||||||| |||||||||||    
T  5484650 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcatggacgaaattg 5484551  T
Q  477 atggttcactc 487  Q
    |||||||||||    
T  5484550 atggttcactc 5484540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 32652568 - 32652358
Alignment:
Q  19 atgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggag 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  32652568 atgggcgaaaacgaatagagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacaaaatcttccttcaaaaatgcaagcttgatcgccggag 32652469  T
Q  119 aggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  32652468 aggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatgtgaggatgtatggtaatggga 32652369  T
Q  219 aacataagggt 229  Q
    |||||| ||||    
T  32652368 aacataggggt 32652358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 282 - 486
Target Start/End: Complemental strand, 39189588 - 39189383
Alignment:
Q  282 gtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggagggacgaa 381  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39189588 gtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaacacattaacggaccttttggacggagggacgaa 39189489  T
Q  382 attgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatgg 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||    
T  39189488 attgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatgg 39189389  T
Q  481 ttcact 486  Q
    ||||||    
T  39189388 ttcact 39189383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 278 - 487
Target Start/End: Original strand, 44994201 - 44994411
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44994201 tttcgtattttccatcaatttagtccctgtacacatgactttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggatggaggga 44994300  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||| |||||||    
T  44994301 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaatttagggatgaaattg 44994400  T
Q  477 atggttcactc 487  Q
    || || |||||    
T  44994401 atagtacactc 44994411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 278 - 482
Target Start/End: Complemental strand, 32652309 - 32652104
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32652309 tttcgtattttccatcaatttagtccatgtacacgtggcttcctttttcccacgtgtataagccaacacagcacactaacggaccttttggacggaggga 32652210  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc-taccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||| ||||||||||    
T  32652209 cgaaattgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccgaaccctgaaaattcagtgacgaaattg 32652110  T
Q  477 atggtt 482  Q
    ||||||    
T  32652109 atggtt 32652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 278 - 487
Target Start/End: Original strand, 42880675 - 42880879
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      |||||    
T  42880675 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagtcaacacagcacactaacggacctttt------aggga 42880768  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||    
T  42880769 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacaaaattg 42880868  T
Q  477 atggttcactc 487  Q
    |||||||||||    
T  42880869 atggttcactc 42880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 39189734 - 39189641
Alignment:
Q  136 gaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaacataagggt 229  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39189734 gaagtgaaaatggatggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaacataggggt 39189641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 5486051 - 5486143
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||    
T  5486051 aacaaattcagggactattttgatatttcgttaaatttagggatgaatttggccgacccctaaaaattcagggacgaaattgatggttcactc 5486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 383 - 488
Target Start/End: Original strand, 44558512 - 44558618
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   |||| ||||| |||||||||| |||| |||||||||| ||||||| ||||||||    
T  44558512 ttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatggt 44558611  T
Q  482 tcactca 488  Q
    |||||||    
T  44558612 tcactca 44558618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 39189777 - 39189730
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagt 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39189777 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagt 39189730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 365 - 486
Target Start/End: Original strand, 6999268 - 6999390
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattc 463  Q
    |||||||||||||| |||||||| ||  |   |||||||||| ||||||||||||||||| ||||||| | |||||||||||||| |  | || ||||||    
T  6999268 ttggacggagggactaaattgattgatattttacaaattcagagactattttgatatttcattaaattgaaggacgaatttggccgattcgtgcaaattc 6999367  T
Q  464 agggacgaaattgatggttcact 486  Q
    | |||||||||||||| ||||||    
T  6999368 aaggacgaaattgatgattcact 6999390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 326 - 448
Target Start/End: Original strand, 13450943 - 13451064
Alignment:
Q  326 cccacgtgtacaagccaacacagcacactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 425  Q
    |||||||||||||| ||||||| ||   |||| || | |||||| |||||||| |  ||||||||||||  | ||||||| |||||||||||||||||||    
T  13450943 cccacgtgtacaagacaacacaacatg-taacagagcatttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcg 13451041  T
Q  426 ttaaatttagggacgaatttggc 448  Q
    |||||||  ||||||||||||||    
T  13451042 ttaaattgggggacgaatttggc 13451064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 15450383 - 15450464
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaattt 445  Q
    ||||||||||||||| ||||||| | || |   |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  15450383 tttggacggagggacaaaattgacgaacattttacaaattcagggactattttgatatttcgttaaattgagggacaaattt 15450464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 43519554 - 43519463
Alignment:
Q  358 ggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||| | |||||||||||     |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  43519554 ggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 43519463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 488
Target Start/End: Original strand, 10372725 - 10372831
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||||||  |  |||||||||||   |||| |||||| ||||||||| || | |||||||||||||||||| ||||||||    
T  10372725 ttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacgaatttgatggt 10372824  T
Q  482 tcactca 488  Q
    |||||||    
T  10372825 tcactca 10372831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 32653598 - 32653680
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||||||||||||| ||||||| | || |   ||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  32653598 tttggacggagggacaaaattgacgaacattttacaaattcaggcactattttgatatttcgttaaattgaaggacgaatttg 32653680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 13450638 - 13450762
Alignment:
Q  19 atgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggag 118  Q
    ||||| ||||| |||||||||||||| | | ||||| |||||| |||| ||| |  ||||| ||| ||||||||||||||| |||  ||||||| |||||    
T  13450638 atgggtgaaaatgaacagagaaaaagaaaaggaagaggaacgatgttaccttaaccacatatgaattcttccttcaaaaatccaacgttgatcgtcggag 13450737  T
Q  119 aggatgatgatcttggagaagtgaa 143  Q
    | || |||||| ||||||| |||||    
T  13450738 atgaggatgattttggagaggtgaa 13450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 39923006 - 39923098
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||  | |||||||||||||||||||||||||||||||    
T  39923006 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattgatggttcactc 39923098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 488
Target Start/End: Complemental strand, 10762686 - 10762580
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||||||  |  |||| ||||||   |||| |||||| ||||||||| || | |||||||||||||||||| ||||||||    
T  10762686 ttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacgaatttgatggt 10762587  T
Q  482 tcactca 488  Q
    |||||||    
T  10762586 tcactca 10762580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 41761733 - 41761831
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||| | ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  |||||| |||||||||||||||    
T  41761733 cactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggcc 41761831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 487
Target Start/End: Original strand, 2350558 - 2350631
Alignment:
Q  415 ttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||   |||| |||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  2350558 ttgatatttcgcataattgagggacaaatttggccgacccatgaaaattcagggactaaattgatggttcactc 2350631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 44794779 - 44794884
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||||||| ||  |||||||||||   |||| ||||||||||||| || ||   ||||||||||||||| |||||||||||    
T  44794779 ttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtgaaaattcagggactaaattgatggt 44794878  T
Q  482 tcactc 487  Q
    ||||||    
T  44794879 tcactc 44794884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 47941916 - 47941811
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||||||| ||  |||||||||||   |||| || |||||||||| || |||| | ||||||||||||| |||||||||||    
T  47941916 ttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccgacccgtaaaaattcagggactaaattgatggt 47941817  T
Q  482 tcactc 487  Q
    ||||||    
T  47941816 tcactc 47941811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 449
Target Start/End: Original strand, 25995080 - 25995164
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||  |||||||| ||| |   ||||||||||| ||||||||||||||||||||||||  ||||  |||||||||    
T  25995080 ttggacggagggaataaattgattgacattttacaaattcaggaactattttgatatttcgttaaattgggggataaatttggcc 25995164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 35997766 - 35997858
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||| |  |||| ||| |||||||||||| |||| ||||||||||||||| || |||||| |||||||    
T  35997766 aacaaattcagggattaaattgatatttcttataattgaggaacgaatttggccgacccgtgaaaattcagggacaaagttgatgattcactc 35997858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 4519597 - 4519535
Alignment:
Q  288 tccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||| ||||||| |  ||||||| |||||||||| ||||||||||||| ||||||||||    
T  4519597 tccatcaaattagtccttgaacacgtgactttctttttgccacgtgtacaagacaacacagca 4519535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 489
Target Start/End: Complemental strand, 44793026 - 44792932
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaa 489  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| ||| ||||||||||| || |||||| || ||||||    
T  44793026 aacaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatgattaactcaa 44792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 489
Target Start/End: Complemental strand, 44992900 - 44992806
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaa 489  Q
    |||||| ||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||||||| |||||| |||||||||    
T  44992900 aacaaactcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactcaa 44992806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 25993944 - 25993871
Alignment:
Q  75 acatacgaaatcttccttcaaaaatgcaatcttgatcgccggagaggatgatgatcttggagaagtgaaaatgg 148  Q
    ||||| ||| ||||||||||||||| |||  |||||||||| ||| ||||||||| ||||||| ||||| ||||    
T  25993944 acatatgaattcttccttcaaaaattcaacgttgatcgccgaagatgatgatgattttggagaggtgaagatgg 25993871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 42879367 - 42879274
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||| ||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||||||| |||||| ||||||||    
T  42879367 aacaaattcatggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactca 42879274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 11255841 - 11255905
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  11255841 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 11255905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 13450304 - 13450395
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||||||||| |||||| ||||||||  ||||| |||||| | ||  | || ||||||| ||||||| |||||| |||||||    
T  13450304 acaaattcagggactattttcatattttgttaaattgggggacaaatttgacatattcgtgcaaattcaaggacgaagttgatgattcactc 13450395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 487
Target Start/End: Complemental strand, 35996186 - 35996063
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  | ||||||||||| ||  ||||||||| |   |||| ||||||||||||| || |||| | ||||| |    
T  35996186 ttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccgacccataaaaatcc 35996087  T
Q  464 agggacgaaattgatggttcactc 487  Q
    || ||| |||||||||||||||||    
T  35996086 agagactaaattgatggttcactc 35996063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 41355919 - 41355990
Alignment:
Q  77 atacgaaatcttccttcaaaaatgcaatcttgatcgccggagaggatgatgatcttggagaagtgaaaatgg 148  Q
    ||||||| ||||||||||||||| |||  ||||| ||| |||| ||||||||| ||||||| ||||| ||||    
T  41355919 atacgaattcttccttcaaaaatccaacgttgattgccagagatgatgatgattttggagaggtgaagatgg 41355990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 833312 - 833262
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||||||   |||| ||||||||| ||||||    
T  833312 aaattcagggactattttgatatttcgaataattcagggacgaaattggcc 833262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 4173740 - 4173790
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 4173790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 5439647 - 5439697
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||||||   |||| ||||||||| ||||||    
T  5439647 aaattcagggactattttgatatttcgaataattcagggacgaaattggcc 5439697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 43507256 - 43507206
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 43507206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 43508653 - 43508703
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 43508703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 27382340 - 27382287
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaag 339  Q
    |||||||||| ||||||| | |||||||||||||||| ||  ||||||||||||    
T  27382340 tttccatcaaattagtccttgtacacgtggctttcttgttgacacgtgtacaag 27382287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 39085151 - 39085244
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||| ||| ||  |||||||||||   |||| ||||||||| ||| || |||| | |||||||||||||||| |||||| ||||||||    
T  39085151 aacaaattcatggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatgattcactca 39085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 51012148 - 51012087
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| |||||||    
T  51012148 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 51012087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 2828410 - 2828502
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||| ||| ||  |||||||||||   |||| |||||| || |||||| |||| | |||||||||||||||| |||||| |||||||    
T  2828410 aacaaattcaaggattaaattgatatttcgcataattgagggacaaagttggccgacccataaaaattcagggacgaagttgatgattcactc 2828502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 10371149 - 10371057
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||||||||  |  |||||||||||   |||| |||||| ||||| ||| || | ||||||||||||||| || ||||||||||||||    
T  10371149 aacaaattcagggatgaaattgatatttcgcataattgagggactaatttagccgacgcgtgaaaattcagggactaagttgatggttcactc 10371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-107; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 17951695 - 17951900
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17951695 atatgggcgaaaatgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 17951794  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17951795 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 17951894  T
Q  217 caaaca 222  Q
    ||||||    
T  17951895 caaaca 17951900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 488
Target Start/End: Original strand, 17951956 - 17952167
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17951956 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 17952055  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  17952056 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattg 17952155  T
Q  477 atggttcactca 488  Q
    ||||||||||||    
T  17952156 atggttcactca 17952167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 17 - 224
Target Start/End: Original strand, 35175517 - 35175723
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  35175517 atatgggcgaaaatgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaa-tcttccttcaaaaatgcaatcttgatcgccgg 35175615  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35175616 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatga 35175715  T
Q  217 caaacata 224  Q
    ||||||||    
T  35175716 caaacata 35175723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 282 - 487
Target Start/End: Original strand, 35175781 - 35175987
Alignment:
Q  282 gtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggagggacgaa 381  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35175781 gtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactatcagaccttttggacggagggacgaa 35175880  T
Q  382 attgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatgg 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||||| |||||||||||||||    
T  35175881 attgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaattcaaggacgaaattgatgg 35175980  T
Q  481 ttcactc 487  Q
    |||||||    
T  35175981 ttcactc 35175987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 34344272 - 34344065
Alignment:
Q  22 ggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggagagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  34344272 ggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttacctttaaaacagacgaaatcttccttcaaaaatgcaagcttgatcgctggagagg 34344173  T
Q  122 atgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaac 221  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  34344172 atgatgatcttggagaagtgaaaatggagggaagaagaacaaccagggacttagttgatgcgttctgtatgaaatgtgaggatgtatggtaatgggaaac 34344073  T
Q  222 ataagggt 229  Q
    ||| ||||    
T  34344072 ataggggt 34344065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 320 - 401
Target Start/End: Complemental strand, 34344003 - 34343922
Alignment:
Q  320 ctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaa 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34344003 ctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaa 34343922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 13613569 - 13613664
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    |||||| ||||||||||||||||||||| || ||||||||||||    |||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  13613569 cactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttg 13613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 4641444 - 4641345
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc-aaataaaaa 496  Q
    ||||||||||| ||  ||||||||||    |||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  4641444 aaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggactaaattgatggttcactcgaaataaaaa 4641345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 487
Target Start/End: Complemental strand, 24662582 - 24662480
Alignment:
Q  386 atggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatggttca 484  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||  |||||||||||| | ||  | || ||||||| ||||||| |||||| ||||    
T  24662582 atggacgtctgacaaattcatggactattttgatatttcgttaaattgggggacgaatttgacatattcgtgcaaattcaaggacgaagttgatgattca 24662483  T
Q  485 ctc 487  Q
    |||    
T  24662482 ctc 24662480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 17950653 - 17950561
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||| ||||||||||||||||||    
T  17950653 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggatgaaattgatggttcactc 17950561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 3456882 - 3456787
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||  ||||||||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  3456882 taacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggcc 3456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 364 - 447
Target Start/End: Original strand, 34345291 - 34345374
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttgg 447  Q
    ||||||||||||||| |||||||  | | |   |||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  34345291 tttggacggagggacaaaattgacaggcattttacaaattcagggactattttgatatttcattaaattgagggacggatttgg 34345374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 3018451 - 3018541
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctac-cctgaaaattcagggacgaa 472  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   |||| ||||||||| |||||| || | ||||||||||||||||||    
T  3018451 ttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagggacgaa 3018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 4289542 - 4289460
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||||||||||||| |||||||  | | |   ||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  4289542 tttggacggagggacaaaattgacaggcattttacaaatttagggactattttgatatttcattaaattgagggacgaatttg 4289460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 2968244 - 2968139
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||||||| ||  |||||||||||   |||| ||||||||||||||   |||| |||||||| |||||| |||||||||||    
T  2968244 ttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgggagacccgtgaaaattgagggactaaattgatggt 2968145  T
Q  482 tcactc 487  Q
    ||||||    
T  2968144 tcactc 2968139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 29077433 - 29077328
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||||||  |  |||| ||||||   |||| |||||| ||||||||| || | |||||||||||||||||| ||||||||    
T  29077433 ttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacgaatttgatggt 29077334  T
Q  482 tcactc 487  Q
    ||||||    
T  29077333 tcactc 29077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 442
Target Start/End: Original strand, 32455881 - 32455969
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||||| ||||||||||||||||  | ||||||||||||    |||||||| ||||| ||||||||||||  ||||| |||||||||    
T  32455881 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaa 32455969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 446
Target Start/End: Original strand, 32439079 - 32439173
Alignment:
Q  352 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    |||||| || ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| |||||||||||||    
T  32439079 actaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttg 32439173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 29112405 - 29112300
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||||||  |  |||| ||||||   |||| |||||| ||||||||| || | ||||||||||||||| || ||||||||    
T  29112405 ttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggactaacttgatggt 29112306  T
Q  482 tcactc 487  Q
    ||||||    
T  29112305 tcactc 29112300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 3018527 - 3018587
Alignment:
Q  428 aaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||| ||||||||| |||||| || | |||||||||||||||||| ||||||||||||||    
T  3018527 aaattcagggacgaagttggccgacgcgtgaaaattcagggacgaatttgatggttcactc 3018587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 10568536 - 10568441
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    |||||||||| ||||||||||||||||| |  ||||| ||||||    ||||||||||||||  |  |||||||| |||||| | |||||||||||    
T  10568536 cactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttg 10568441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 20523503 - 20523408
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||||| || ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| | |||||||||||    
T  20523503 cactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttg 20523408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 487
Target Start/End: Complemental strand, 30639670 - 30639611
Alignment:
Q  429 aatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||| |||||| ||||||||| |||| |||||||||||||||||| |||||| |||||||    
T  30639670 aattgagggactaatttggccgacccgtgaaaattcagggacgaagttgatgattcactc 30639611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 3480657 - 3480707
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  3480657 aaattcagggactagtttgatatttcgaaaaattcagggacgaaattggcc 3480707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 425
Target Start/End: Complemental strand, 9398797 - 9398723
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 425  Q
    |||||||||| ||||||||||||||||| |  |||||| ||||| |  ||||||||||||||  | |||||||||    
T  9398797 cactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcg 9398723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 9398883 - 9398822
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | ||||||||||| |||| ||  |||||||||| | |||||||    
T  9398883 tttccatcaatttagtccttgtacacgtggctgtcttgttgacacgtgtacaggacaacaca 9398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 490
Target Start/End: Complemental strand, 35174464 - 35174388
Alignment:
Q  415 ttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaa 490  Q
    ||||||||||||  |||| ||  ||||| |||||| |||| | |||||||||||||||| |||||| ||||||||||    
T  35174464 ttgatatttcgtataattgagaaacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactcaaa 35174388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 193; Significance: 1e-104; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 40020288 - 40020500
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40020288 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacaaagttaccttcaaaacaaacgaaatcttccttcaaaaatgcaatcttgatcgccgg 40020387  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40020388 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagagacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 40020487  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  40020488 caaacataggggt 40020500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 278 - 487
Target Start/End: Original strand, 40020549 - 40020759
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40020549 tttcgtattttccatcaatttagtccctgtacacgtggttttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 40020648  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||| || |||||||||||||||||    
T  40020649 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggcagacccctaaagattcagggacgaaattg 40020748  T
Q  477 atggttcactc 487  Q
    |||||||||||    
T  40020749 atggttcactc 40020759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 28433373 - 28433580
Alignment:
Q  22 ggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggagagg 121  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  28433373 ggcgaaaatgaacggagaaaaaggagaagaagatgaatgaagttaccttcaaaacagacgaaatcttctttcaaaaatgcaagcttgatcgccggagagg 28433472  T
Q  122 atgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaac 221  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28433473 atgatgatcttggagaagtgaaaatggagggaagaagaatagatagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgggaaac 28433572  T
Q  222 ataagggt 229  Q
    ||| ||||    
T  28433573 ataggggt 28433580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 278 - 481
Target Start/End: Original strand, 28433630 - 28433834
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  28433630 tttcgtattttccatcaatttagtccatgtacacgtggcttcctttttcccacgtgtacaagccaacacaacaaactaacgaaccttttggacggaggga 28433729  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||||    
T  28433730 cgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaattcagggacgaaattg 28433829  T
Q  477 atggt 481  Q
    |||||    
T  28433830 atggt 28433834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 27691286 - 27691193
Alignment:
Q  356 acggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||| | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  27691286 acggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 27691193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 31201162 - 31201267
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||||||| ||  |||||||||||   |||| | |||||||||||||| |||| ||||||||||||||| |||||||||||    
T  31201162 ttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgtgaaaattcagggactaaattgatggt 31201261  T
Q  482 tcactc 487  Q
    ||||||    
T  31201262 tcactc 31201267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 364 - 478
Target Start/End: Original strand, 23811532 - 23811647
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaatt 462  Q
    |||||||||||||||||||||||  ||| |   ||||||||| ||||||||||||||||| || |||||  ||||||||||||||| | || ||  ||||    
T  23811532 tttggacggagggacgaaattgactgacattttacaaattcaaggactattttgatattttgtaaaattgggggacgaatttggccgatccgtgcgaatt 23811631  T
Q  463 cagggacgaaattgat 478  Q
    |||||||||| |||||    
T  23811632 cagggacgaagttgat 23811647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 365 - 491
Target Start/End: Original strand, 42897775 - 42897902
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  ||||||||| ||||||  ||||||||||    |||| |||||||||||||||| |||| | |||||||    
T  42897775 ttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattc 42897874  T
Q  464 agggacgaaattgatggttcactcaaat 491  Q
    | ||||| | ||||||||||||||||||    
T  42897875 aaggacggatttgatggttcactcaaat 42897902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 8609794 - 8609892
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| ||||||||||||||||    
T  8609794 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggcc 8609892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 448
Target Start/End: Original strand, 26242321 - 26242418
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    |||||||| |||||  | |||||||||  |||||||||||||||||||||    
T  26242321 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggc 26242418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 13108343 - 13108437
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaattt 445  Q
    |||||||| | ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||| ||||    
T  13108343 cactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtattt 13108437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 13282615 - 13282517
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  |||||||||||     ||||||||||||||  | |||||||||  ||||| ||||||||||||||||    
T  13282615 cactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggcc 13282517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 38547365 - 38547267
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| |||||||| |||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  ||||| | ||||| ||||||||    
T  38547365 cactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggcc 38547267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 442
Target Start/End: Original strand, 33708814 - 33708902
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||||||||||||||||||||||  | |||||||||||     |||||||||||||| ||| ||||||||  ||||| |||||||||    
T  33708814 taacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaa 33708902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 490
Target Start/End: Original strand, 31823475 - 31823570
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaa 490  Q
    |||||||| ||||| ||  |||||||||||   |||| ||||||||| |||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  31823475 aacaaatttagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgatccactcaaa 31823570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 29239187 - 29239237
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||||||||||||| ||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggcc 29239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 33762713 - 33762763
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggcc 33762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 488
Target Start/End: Complemental strand, 9184507 - 9184382
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaatt 462  Q
    ||||||||||||||| |  | ||| ||||||  |||||||||||||||| ||||||||||||   | ||  | ||||||||||||| |  | || |||||    
T  9184507 tttggacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaatt 9184408  T
Q  463 cagggacgaaattgatggttcactca 488  Q
    || |||||||||||||| ||||||||    
T  9184407 caaggacgaaattgatgattcactca 9184382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 31199577 - 31199484
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||||||| ||  ||||||||||    |||| |||||||||||||||| |||| ||| ||||||||||| || |||||| ||||||||    
T  31199577 aacaaattcagggattaaattgatatttctcataattaagggacgaatttggccgacccgtgataattcagggactaagttgatgattcactca 31199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 13108258 - 13108322
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  13108258 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 13108322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 488
Target Start/End: Complemental strand, 31821541 - 31821417
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  | |||||| |||||||  |||||||||||   |||| ||||||||| ||| || ||   |||||||||    
T  31821541 ttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattc 31821442  T
Q  464 agggacgaaattgatggttcactca 488  Q
    ||||||||| ||||| |||||||||    
T  31821441 agggacgaatttgattgttcactca 31821417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 33748424 - 33748332
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||| | ||  |||||||||||   |||| | ||||||| |||||| |||| |||||||||||||||||| |||||| |||||||    
T  33748424 aacaaattcaggaattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 33748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 38547450 - 38547386
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  38547450 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 38547386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 487
Target Start/End: Complemental strand, 1320740 - 1320617
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||| ||||   ||| |||||||||  ||||||||||||||||  ||||||||| |   |||| ||||| |||||| ||| |||| ||||||||     
T  1320740 ttggacggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccgacccgtgaaaattt 1320641  T
Q  464 agggacgaaattgatggttcactc 487  Q
    | |||| || ||||||||||||||    
T  1320640 aaggacaaatttgatggttcactc 1320617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 12515203 - 12515140
Alignment:
Q  369 acggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatt 432  Q
    |||||||||| |||||||| ||| |   |||||||||| ||||||||| |||||||||||||||    
T  12515203 acggagggactaaattgattgacattttacaaattcagagactattttaatatttcgttaaatt 12515140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 425
Target Start/End: Original strand, 27406907 - 27406978
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 425  Q
    |||||||| |||||||||||| |||  | ||||||||||||    |||||||||||||||||| ||||||||    
T  27406907 taacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcg 27406978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 442
Target Start/End: Complemental strand, 33707295 - 33707252
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaa 33707252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 601704 - 601754
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggcc 601754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 15305931 - 15305861
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttc 424  Q
    |||||||  ||||||||||||||||  | ||||||||||||    |||||||||||||| |||||||||||    
T  15305931 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 15305861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 15486300 - 15486230
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttc 424  Q
    |||||||  ||||||||||||||||  | ||||||||||||    |||||||||||||| |||||||||||    
T  15486300 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 15486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 488
Target Start/End: Complemental strand, 32822466 - 32822360
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||| ||  ||||||||||||||||  |||||||||     |||| ||||| |||||||||| | || | |||||||| ||||||| ||||||||    
T  32822466 ttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattcaaggacgaagttgatggt 32822367  T
Q  482 tcactca 488  Q
    |||||||    
T  32822366 tcactca 32822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 41042591 - 41042689
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  |||||||||| |    ||||||||||||||  | ||||||||   ||||| |||||| |||||||||    
T  41042591 cactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatttggcc 41042689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 5036672 - 5036611
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| |||||||    
T  5036672 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 5036611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 33761158 - 33761109
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| |||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggc 33761109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 40019248 - 40019155
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | ||||||||  |||||| |||||| ||||||||    
T  40019248 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaagacgaagttgatgattcactca 40019155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 8609709 - 8609773
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| |   |||||||||||| ||||||||||    
T  8609709 tttccatcaatttagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaacacagca 8609773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 28432345 - 28432293
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactatttt 416  Q
    ||||||||||||||| ||||||| |||| |   ||||||||||||||||||||    
T  28432345 tttggacggagggacaaaattgacggacattttacaaattcagggactatttt 28432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-104; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 278 - 489
Target Start/End: Complemental strand, 45463880 - 45463668
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45463880 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaacacactaacggaccttttggacggaggga 45463781  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  45463780 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattg 45463681  T
Q  477 atggttcactcaa 489  Q
    |||||||||||||    
T  45463680 atggttcactcaa 45463668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 45464141 - 45463929
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45464141 atatgggcgaaaatgaatagagaaaaaggagaagaagatgaacgaagttaccttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 45464042  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  45464041 agaggatgatgatcttggagaagtgaaaatggagggaagaaaaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatga 45463942  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  45463941 caaacataggggt 45463929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 278 - 487
Target Start/End: Original strand, 4322486 - 4322696
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4322486 tttcgtattttccatcaatttagtccctgtacacgtgactttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 4322585  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| | ||||||| |||||||||||||||||    
T  4322586 cgaaattgatggatgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgagtttggccgatccctgaatattcagggacgaaattg 4322685  T
Q  477 atggttcactc 487  Q
    |||||| ||||    
T  4322686 atggtttactc 4322696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 4322231 - 4322437
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  4322231 atatgggcgaaaacgaacagagaaaaaggagaa---gatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaatcttgattgccgg 4322327  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  4322328 agaggatgatgatcttggagaagtgaaaatggagg---gaagaacagacagggacttagttgatgtgttctgtatgaaaggtgagcatgtatggtaatgg 4322424  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  4322425 caaacataggggt 4322437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 48303307 - 48303514
Alignment:
Q  19 atgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggag 118  Q
    ||||||||||||||| |||||||||||||||   ||||||| |||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  48303307 atgggcgaaaacgaatagagaaaaaggagaa---gatgaacaaagttaccttcaaaacagacgaaatcttccttctaaaatgcaagcttgatcgccggag 48303403  T
Q  119 aggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |    
T  48303404 aggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttaattgatgtgttctgtatgaaatgtgaggatgtatggtaatggga 48303503  T
Q  219 aacataagggt 229  Q
    |||||| ||||    
T  48303504 aacataggggt 48303514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 34691462 - 34691254
Alignment:
Q  21 gggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggagag 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||| |||||||||| ||||||| ||||||||    
T  34691462 gggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaatgaacgaattcttccttaaaaaatgcaagcttgatcaccggagag 34691363  T
Q  121 gatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  34691362 gatgatgatcttggagaagtgaaaatggagggaagaagaacaaacagtgacttagttgatgtgttctgtatgaaatgtgaggatgtatggtagtggaaaa 34691263  T
Q  221 cataagggt 229  Q
    |||| ||||    
T  34691262 cataggggt 34691254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 278 - 487
Target Start/End: Original strand, 48303563 - 48303773
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48303563 tttcgtattttctatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacagaccttttggacggaggga 48303662  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||| ||||| || | | |||||||||||||||||||||||    
T  48303663 cgaaattgatggacgtcaaataaattcagggactattttgatattttgttaaattagaggacggatttgaccgatcgctgaaaattcagggacgaaattg 48303762  T
Q  477 atggttcactc 487  Q
    |||||| ||||    
T  48303763 atggtttactc 48303773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 278 - 487
Target Start/End: Complemental strand, 34691205 - 34690995
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||| || ||||||||||||||||||||| |||||||||  |||||||||| |||||||    
T  34691205 tttcgtattttccatcaatttaatccctgtacacgtggcttccttgttgccacgtgtacaagccaacacaacacactaacataccttttggatggaggga 34691106  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||||||| | |||| |||||||||||| |||||||    
T  34691105 cgaaattgatggacgtcagacaaattcagagactattttgatattttgttaaatttggggacgaatttggccgatccctaaaaattcagggatgaaattg 34691006  T
Q  477 atggttcactc 487  Q
    |||||| ||||    
T  34691005 atggtttactc 34690995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 30109708 - 30109789
Alignment:
Q  406 gggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatggttcact 486  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  30109708 gggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggttcact 30109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 365 - 493
Target Start/End: Original strand, 46996703 - 46996832
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  |||||||||| |||||  |||||||||||   |||| ||||||||| |||||| || | |||||||||    
T  46996703 ttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattc 46996802  T
Q  464 agggacgaaattgatggttcactcaaataa 493  Q
    ||||||||| ||||||||||||||| ||||    
T  46996803 agggacgaatttgatggttcactcatataa 46996832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 491
Target Start/End: Original strand, 47341719 - 47341814
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaat 491  Q
    ||||||||||||||||  |||||||||||   |||| ||||| |||||||||| |||| |||||||||| ||||||| ||||||||||||||||||    
T  47341719 acaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaatttgatggttcactcaaat 47341814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 34692715 - 34692797
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||||||||||||| |||||||||||| |   |||||||||||||||||||| ||||||||||||||| ||| || ||||||    
T  34692715 tttggacggagggacaaaattgatggacattttacaaattcagggactattttcatatttcgttaaattgaggtacaaatttg 34692797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 48302275 - 48302191
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||||||| |||| ||||||| | || |   |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  48302275 tttggacggaaggacaaaattgacgaacattttacaaattcagagactattttgatatttcgttaaattgagggacgaatttggc 48302191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 490
Target Start/End: Complemental strand, 4321130 - 4321035
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaa 490  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| |||||||||||||||||| |||||| ||||||||||    
T  4321130 aacaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactcaaa 4321035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 27666055 - 27666150
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||| ||||||||||||||||||| | |||||||||||     |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  27666055 taacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 27666150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 487
Target Start/End: Original strand, 38613503 - 38613605
Alignment:
Q  386 atggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttca 484  Q
    |||||||||  ||||||||||||||||  |||||||||||   |||| ||||| |||||||||| |||| |||||||| | ||||||| |||||||||||    
T  38613503 atggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttgatggttca 38613602  T
Q  485 ctc 487  Q
    |||    
T  38613603 ctc 38613605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 29996504 - 29996589
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggac 439  Q
    |||||||||||||||| ||||||||||| ||||||||||||    ||||||||||| || ||||||||||||  ||||| ||||||    
T  29996504 taacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggac 29996589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 35344309 - 35344414
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||||||| ||  |||||||||||   |||| |||||||||||||||  |||| ||||||||| ||||| |||||||||||    
T  35344309 ttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctgacccgtgaaaattcggggactaaattgatggt 35344408  T
Q  482 tcactc 487  Q
    ||||||    
T  35344409 tcactc 35344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 365 - 429
Target Start/End: Original strand, 34785080 - 34785144
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaa 429  Q
    |||||||||||||| |||||||| ||| |   |||||||||||||||||||||||||||||||||    
T  34785080 ttggacggagggactaaattgattgacattttacaaattcagggactattttgatatttcgttaa 34785144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 20478176 - 20478081
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||| ||||||||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||| ||||| ||||||    
T  20478176 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggcc 20478081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 38613684 - 38613625
Alignment:
Q  288 tccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||| ||||||| |  |||||||||||||||||||||||||||||||| |||||||    
T  38613684 tccatcaagttagtccttgaacacgtggctttctttttcccacgtgtacaagacaacaca 38613625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 56466 - 56376
Alignment:
Q  352 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||| ||| |||||||||||||||   ||||||||||||||    |||||||||||||| ||||||||||||  ||||| |||||||||    
T  56466 actaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaa 56376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 365 - 423
Target Start/End: Complemental strand, 11682904 - 11682846
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatattt 423  Q
    |||||||||||||| ||||||||||||||| ||| |||||| |||||| ||||||||||    
T  11682904 ttggacggagggactaaattgatggacgtctaacgaattcaaggactaatttgatattt 11682846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 8421508 - 8421415
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| ||| ||||||||||| || |||||| ||||||||    
T  8421508 aacaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatgattcactca 8421415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 487
Target Start/End: Original strand, 8423316 - 8423405
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||||| ||  |||||||||||   |||| |||||| ||||||||  |||| ||||||||||||||| |||||||||||||||||    
T  8423316 aaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgtgaaaattcagggactaaattgatggttcactc 8423405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 46994752 - 46994659
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||||||| ||  |||||||||||   |||| | ||||||| |||||| |||| |||||||||||||||||| |||||| ||||||||    
T  46994752 aacaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactca 46994659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 30108657 - 30108565
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||||||| |||||| |||||||    
T  30108657 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 30108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 488
Target Start/End: Original strand, 33038798 - 33038922
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  | ||||||||||||||  |||||||||||   |||| ||||| ||||||| || |||| | |||||||    
T  33038798 ttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattc 33038897  T
Q  464 agggacgaaattgatggttcactca 488  Q
    | ||||||| |||||| ||||||||    
T  33038898 aaggacgaatttgatgattcactca 33038922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 485
Target Start/End: Complemental strand, 46810797 - 46810707
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcac 485  Q
    |||||||||||||| ||  |||||||||||   |||| |||||| ||||||||| | || |||||||||||||||||| |||||| |||||    
T  46810797 aacaaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatgattcac 46810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 46812601 - 46812706
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||| ||||||||  ||||||||||    |||| ||||| |||||||||| || | | |||||||| ||||||| ||||||||    
T  46812601 ttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagttgatggt 46812700  T
Q  482 tcactc 487  Q
    ||||||    
T  46812701 tcactc 46812706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 40785547 - 40785639
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  ||||||||||    |||| || || |||||||||| |||| |||||||||| |||||||||||||| |||||||    
T  40785547 aacaaattcagggattagattgatatttcacataattgagagatgaatttggccgacccgtgaaaattcaaggacgaaattgatgattcactc 40785639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 1546424 - 1546365
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggac 410  Q
    |||||||||||||||||||||||||||| |  ||||||||||| | | ||||||| ||||    
T  1546424 cactaacggaccttttggacggagggaccattttgatggacgtgagagaaattcaaggac 1546365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 2167700 - 2167641
Alignment:
Q  288 tccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||| ||||||| |  || ||||||||||||||| ||||||||||||| |||||||    
T  2167700 tccatcaaattagtccttgaacgcgtggctttctttttgccacgtgtacaagacaacaca 2167641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 438
Target Start/End: Complemental strand, 6602472 - 6602385
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttaggga 438  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| |||||    
T  6602472 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggga 6602385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 37796170 - 37796265
Alignment:
Q  353 ctaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||||| ||| ||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||||  |||||||||||||    
T  37796170 ctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggc 37796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 20479719 - 20479769
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggcc 20479769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 24228396 - 24228494
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||| ||| |||||||||| |||||| |  ||||||||||||    |||||||| |||||  | |||||||||  ||||| ||||||||||||||||    
T  24228396 cactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggcc 24228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 34776902 - 34777000
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| ||| | ||||||||||    
T  34776902 cactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggcc 34777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 35403619 - 35403669
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 35403669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 39859216 - 39859314
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  |||| |||||||    ||||||| ||||||  | |||||||||  ||||| |||||| |||||||||    
T  39859216 cactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggcc 39859314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 430
Target Start/End: Complemental strand, 48704302 - 48704268
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaa 430  Q
    ||||||||| |||||||||||||||||||||||||    
T  48704302 aacaaattcggggactattttgatatttcgttaaa 48704268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 491
Target Start/End: Original strand, 23955284 - 23955380
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaat 491  Q
    ||||||||||| || ||  ||||||||||    |||| |||||||||||||||| | || | ||||||||| |||||| |||||| |||||||||||    
T  23955284 aacaaattcagagattaaattgatatttcacataattaagggacgaatttggccaatccataaaaattcagagacgaagttgatgattcactcaaat 23955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 35342517 - 35342425
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| |||||| ||||||||| |||| | | ||||||||||| || |||||| |||||||    
T  35342517 aacaaattcagggattaaattgatatttcgcataattgagggacaaatttggccgacccgtaataattcagggactaagttgatgattcactc 35342425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 39859130 - 39859194
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||| ||||||| | ||||||||||| |||| ||  |||||||||| | ||||||||||    
T  39859130 tttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagca 39859194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 45465183 - 45465275
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| ||| || |||| | |||||||| ||||||| |||||| |||||||    
T  45465183 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattcactc 45465275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-104; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 11022666 - 11022878
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11022666 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaatcttgatcgccgg 11022765  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11022766 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacaaacagggacttagttgatgtgttatgtatgaaatatgaggatgtatggtaatgg 11022865  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  11022866 caaacataggggt 11022878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 278 - 483
Target Start/End: Original strand, 11022927 - 11023132
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11022927 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 11023026  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccctgaaaattcagggacgaaattga 477  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  11023027 cggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgaccctgaaaattcagggacgaaattga 11023126  T
Q  478 tggttc 483  Q
    ||||||    
T  11023127 tggttc 11023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 278 - 487
Target Start/End: Complemental strand, 28246873 - 28246663
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28246873 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacagaggga 28246774  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||||||||||    
T  28246773 cgaaattgatggacgtcaaacaaattcaggaactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcagggacgaaattg 28246674  T
Q  477 atggttcactc 487  Q
    |||||||||||    
T  28246673 atggttcactc 28246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 28247134 - 28246922
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  28247134 atatgggcgaaaacgaatagagaaaaaggagaagaagatgaacaaagttaccttcaaaacaaacaaaatcttccttcaaaaatgcaatcttgatcgccgg 28247035  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  28247034 agaggatgatgatcttggacaagtgaaaatggagggaagaagaacagacagacacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 28246935  T
Q  217 caaacataagggt 229  Q
     ||||||| ||||    
T  28246934 taaacataggggt 28246922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 38148960 - 38148755
Alignment:
Q  24 cgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggagaggat 123  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||||||| |||||||||    
T  38148960 cgaaaacgaacatagaaaaaggagaagaagatgaacgaagttacctttaaaccagacgaaatcttccttcaaaaatgcaagcttgatcgcgggagaggat 38148861  T
Q  124 gatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaacat 223  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  38148860 gatgatcttggagaagtgaaaatggagggaagaagaacagactggaacttagttgatgtgttctgtatgaaatgtgaggatgtatggtaatgagaaacat 38148761  T
Q  224 aagggt 229  Q
    | ||||    
T  38148760 aggggt 38148755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 278 - 489
Target Start/End: Complemental strand, 38148706 - 38148493
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||| |||    
T  38148706 tttcatattttccatcaatttagtccctgtacacgtggcttcctttttccgacgtgtacaagccaatacaacacactaacagaccttttggacggatgga 38148607  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc--taccctgaaaattcagggacgaaatt 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    | ||||||||||||||||||||||    
T  38148606 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacaaatttggcccgatctctgaaaattcagggacgaaatt 38148507  T
Q  476 gatggttcactcaa 489  Q
    ||||||| ||||||    
T  38148506 gatggtttactcaa 38148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 545 - 652
Target Start/End: Original strand, 43984611 - 43984718
Alignment:
Q  545 aaaacgctatatagttttgttcaactgtcaattgtgaaaactgaaaacgaaaaattttagaatgttttttgagatgtaacaacaatgtcaatggtttttg 644  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43984611 aaaacgctatatagttttgttcaactgtcaattgtgaaaactgcaaacgaaaaattttagaatgttttttgagatgtaacaacaatgtcaatggtttttg 43984710  T
Q  645 actcatac 652  Q
    ||||||||    
T  43984711 actcatac 43984718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 43984528 - 43984582
Alignment:
Q  493 aaaaacttggtaattgaacatctttatgatctaaagttccatttacacccctaaa 547  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43984528 aaaaacttggtaattgaacatctttatgatctaaagttccatttacacccctaaa 43984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 449
Target Start/End: Original strand, 11315258 - 11315420
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggagggacgaaattg 385  Q
    |||||||||| || |||| | |||| ||||||| ||| ||  |||||||||||| ||||||| ||   || | || | ||||||||||||||| |  |||    
T  11315258 tttccatcaaattggtccttgtacatgtggcttccttgttgacacgtgtacaagacaacacaacatg-tagcagaacatttggacggagggaccattttg 11315356  T
Q  386 atggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||  || ||||||||||||    
T  11315357 atggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggcc 11315420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 37417378 - 37417273
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   |||| ||||| |||||||||| |||| |||||||||| |||||||  |||||||    
T  37417378 ttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaatatgatggt 37417279  T
Q  482 tcactc 487  Q
    ||||||    
T  37417278 tcactc 37417273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 488
Target Start/End: Original strand, 41144 - 41234
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    ||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatgattcactca 41234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 488
Target Start/End: Complemental strand, 15372604 - 15372498
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||||||| ||  ||||||||| |   |||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||    
T  15372604 ttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccgacccgtgaaaattcagggactaaattgatggt 15372505  T
Q  482 tcactca 488  Q
    |||||||    
T  15372504 tcactca 15372498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 39664755 - 39664853
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||| |||||  |||||||||||||||    
T  39664755 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggcc 39664853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 11021625 - 11021533
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| |||||||||||||||||| |||||| |||||||    
T  11021625 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 11021533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 365 - 487
Target Start/End: Original strand, 29909661 - 29909784
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  ||||||| ||||||||  |||||||||||   |||| |||||| || |||||| || | |||||||||    
T  29909661 ttggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccgacgcgtgaaaattc 29909760  T
Q  464 agggacgaaattgatggttcactc 487  Q
    |||||| || ||||||||||||||    
T  29909761 agggacaaatttgatggttcactc 29909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 483
Target Start/End: Complemental strand, 39645 - 39560
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttc 483  Q
    ||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| | ||||||||||||| |||||||||||||    
T  39645 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtaaaaattcagggactaaattgatggttc 39560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 28248174 - 28248267
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||||||| |||||| ||||||||    
T  28248174 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactca 28248267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 38149986 - 38150066
Alignment:
Q  368 gacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||||||| ||||||| |||| |   |||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  38149986 gacggagggacaaaattgacggacattttacaaattcata-actattttgatatttcgttaaattgagggacgaatttggcc 38150066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 40560360 - 40560263
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    ||||||| || ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| |||||||||||||||    
T  40560360 cactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggc 40560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 41706644 - 41706539
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    |||||||||||   | ||||||||||| ||  |||||||||||   |||| ||||||||||||| || |||| |||||||||||| || |||||||||||    
T  41706644 ttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtgaaaattcaggaactaaattgatggt 41706545  T
Q  482 tcactc 487  Q
    ||||||    
T  41706544 tcactc 41706539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 487
Target Start/End: Complemental strand, 7744180 - 7744043
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcct 450  Q
    ||||||||||||||||||| |||||||| |  ||||||||| | | | |||||||||||| |  |||||||||||  |||||| | |||| |||| ||||    
T  7744180 cactaacggaccttttggatggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaattttgagacg-attttgcct 7744082  T
Q  451 a--ccctgaaaattcagggacgaaattgatggttcactc 487  Q
    |   | || ||||||||||||||| |||||| |||||||    
T  7744081 aatgcttgcaaattcagggacgaagttgatgattcactc 7744043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 14387438 - 14387388
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggcc 14387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 17946231 - 17946141
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacga 441  Q
    |||||||||||||||||||||||||||| |  ||||||||| | | | |||||||||||| |  ||||||||| |  ||||||| ||||||    
T  17946231 cactaacggaccttttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacga 17946141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 24208061 - 24208147
Alignment:
Q  363 ttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||   |||| ||||||||| ||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggcc 24208147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 37020642 - 37020572
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttc 424  Q
    |||||||| ||||||||||||||||  | ||||||||||||    |||||||||||||| |||||||||||    
T  37020642 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttc 37020572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 33285 - 33193
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  ||||||||||    |||| | ||||||| |||||| |||| |||||||||||||||||| |||||| |||||||    
T  33285 aacaaattcagggattaaattgatatttcacataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 33193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 11315034 - 11315098
Alignment:
Q  79 acgaaatcttccttcaaaaatgcaatcttgatcgccggagaggatgatgatcttggagaagtgaa 143  Q
    ||||| ||||||||||||||| |||| |||||||  ||||| ||||||||| ||||||| |||||    
T  11315034 acgaattcttccttcaaaaatccaatgttgatcgttggagatgatgatgattttggagaggtgaa 11315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 41708429 - 41708521
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| ||| ||||||| ||| || |||||| |||||||    
T  41708429 aacaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagagactaagttgatgattcactc 41708521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 6785991 - 6786086
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||| ||| ||||||||||||||||  | ||||||||||||    |||||||||||||| |||||||||||    |||| ||||||||| ||||||    
T  6785991 taacagacattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggcc 6786086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 10716900 - 10716963
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||||||||||  | ||||| | ||||||||||||||||| ||||||||  ||||||||||||    
T  10716900 ttgatggacgtctgaaaaatttaaggactattttgatattttgttaaattatgggacgaatttg 10716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 16763201 - 16763118
Alignment:
Q  363 ttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    |||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| |||||||||||||    
T  16763201 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttg 16763118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 16764611 - 16764661
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 16764661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 19908253 - 19908351
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  |||| |||||||    ||||||| ||||||  | |||||||||  ||||| |||||| |||||||||    
T  19908253 cactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggcc 19908351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 24205687 - 24205637
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  24205687 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggcc 24205637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 25619751 - 25619661
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcact 486  Q
    ||||||||||||||||  ||||||||| |   |||| ||||| ||||||| || |||| | |||||||| ||||||| |||||||||||||    
T  25619751 acaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaaggacgaatttgatggttcact 25619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 26584819 - 26584901
Alignment:
Q  366 tggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||||||||| ||| |||||||||||| |  ||||| ||||| || |||||||||| |  || || |||||||||||||||    
T  26584819 tggacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaatttggc 26584901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 44709752 - 44709850
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||| | ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | | |||||||  ||||| |||| |||||||||||    
T  44709752 cactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggcc 44709850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 15432433 - 15432328
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||| |||||  |||||||||||   |||| ||||| ||||||| || |||| | |||||||| |||  || ||||||||    
T  15432433 ttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaaggataaatttgatggt 15432334  T
Q  482 tcactc 487  Q
    ||||||    
T  15432333 tcactc 15432328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 487
Target Start/End: Original strand, 42880829 - 42880902
Alignment:
Q  415 ttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||   |||| ||||||||||||| || |||| | |||||||||||||||| |||||| |||||||    
T  42880829 ttgatatttcgcataattaagggacgaatttgaccgacccgtaaaaattcagggacgaagttgatgattcactc 42880902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 44709666 - 44709727
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | ||||||||| | |||| ||  |||||||||||| |||||||    
T  44709666 tttccatcaatttagtccttgtacacgtggatgtcttgttgacacgtgtacaagacaacaca 44709727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 19908167 - 19908231
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||| ||||||| | ||||||||||| |||| ||  |||||||||| | ||||||||||    
T  19908167 tttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagca 19908231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 37022185 - 37022233
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttgg 447  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||    
T  37022185 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgg 37022233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 42620416 - 42620628
Alignment:
Q  17 atatgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccgg 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42620416 atatgggcgaaaacgaacaaagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaatcttgatcgccgg 42620515  T
Q  117 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42620516 agaggatgatgatcttggagaagtgaaaatggagggaagaagaacaaatagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatgg 42620615  T
Q  217 caaacataagggt 229  Q
    |||||||| ||||    
T  42620616 caaacataggggt 42620628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 278 - 492
Target Start/End: Original strand, 42620677 - 42620892
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42620677 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttgaacggaggga 42620776  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
     |||||||||||||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| | |||||||||||| |||| |||||||    
T  42620777 tgaaattgatggacgtcaaacaaattcagagactattttgatatttggttaaattgggggacgaatttggccgacccctgaaaattccgggatgaaattg 42620876  T
Q  477 atggttcactcaaata 492  Q
    |||||| |||| ||||    
T  42620877 atggttgactctaata 42620892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 383 - 488
Target Start/End: Complemental strand, 38596973 - 38596867
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    |||||||||||| |||||||||||||||||  |||||||||||   |||| |||||||||||||||| |||| | |||||||| ||||||| ||||||||    
T  38596973 ttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatttgatggt 38596874  T
Q  482 tcactca 488  Q
    |||||||    
T  38596873 tcactca 38596867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 364 - 487
Target Start/End: Original strand, 1344781 - 1344905
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaatt 462  Q
    ||||||||||||||| |||||||| ||| |   ||||||||| |||||||||||||||||||| |||||  ||||| |||||| || |  | || |||||    
T  1344781 tttggacggagggactaaattgattgacattttacaaattcaaggactattttgatatttcgtaaaattgggggacaaatttgaccgattcatgcaaatt 1344880  T
Q  463 cagggacgaaattgatggttcactc 487  Q
    ||||||||||||||||| |||||||    
T  1344881 cagggacgaaattgatgattcactc 1344905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 365 - 487
Target Start/End: Original strand, 18728603 - 18728726
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctac-cctgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  ||||||||||||||||  |||||||||||   |||| ||||||||| |||||| ||   |||||||||    
T  18728603 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattc 18728702  T
Q  464 agggacgaaattgatggttcactc 487  Q
    ||||||||| ||||||||||||||    
T  18728703 agggacgaatttgatggttcactc 18728726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 29621771 - 29621866
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||| ||||||||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  29621771 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggcc 29621866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 365 - 487
Target Start/End: Complemental strand, 35395456 - 35395333
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctac-cctgaaaattc 463  Q
    ||||||||||||||    |||||||||||| |||||||||||| ||||  |||||||||||   |||| ||||||||| |||||| ||   |||||||||    
T  35395456 ttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 35395357  T
Q  464 agggacgaaattgatggttcactc 487  Q
    ||||| ||| ||||||||||||||    
T  35395356 agggatgaatttgatggttcactc 35395333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 490
Target Start/End: Original strand, 40330514 - 40330609
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaa 490  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||| ||||||| |||| |||||||||||||||||| |||||| ||||||||||    
T  40330514 aacaaattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatgattcactcaaa 40330609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 365 - 495
Target Start/End: Original strand, 43318061 - 43318192
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    || |||||||||  ||||||||||||||||  |||||||||||   |||| ||||| || ||||||| |||| | |||||||    
T  43318061 ttggacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattc 43318160  T
Q  464 agggacgaaattgatggttcactcaaataaaa 495  Q
    | ||||||| |||||||||||||| |||||||    
T  43318161 aaggacgaatttgatggttcactcgaataaaa 43318192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 17574455 - 17574357
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| ||||||||||||||||    
T  17574455 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggcc 17574357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 24541206 - 24541297
Alignment:
Q  359 gaccttttggacggagg-gacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||||||||||||| || ||| ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  24541206 gaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 24541297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 42473597 - 42473692
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||| ||||||||||| ||||  | ||||||||||||    |||||||||||||||||||||||||||   |||| ||||||||| ||||||    
T  42473597 taacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggcc 42473692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 489
Target Start/End: Original strand, 32089924 - 32090018
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaa 489  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||||||| |||||| |||||||||    
T  32089924 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactcaa 32090018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 1343345 - 1343264
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaattt 445  Q
    ||||||||||||||| |||||||| ||  |   |||||||||  |||||||||||||||| |||||||| ||||||||||||    
T  1343345 tttggacggagggactaaattgattgatattttacaaattcaaagactattttgatattttgttaaattaagggacgaattt 1343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 489
Target Start/End: Complemental strand, 32087637 - 32087512
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  | ||||| ||||||||  |||||||||||   |||| ||||||||| |||  | || | |||||||||    
T  32087637 ttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaagttgatcgacgcgtgaaaattc 32087538  T
Q  464 agggacgaaattgatggttcactcaa 489  Q
    ||||||||| ||||||||||||||||    
T  32087537 agggacgaatttgatggttcactcaa 32087512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 487
Target Start/End: Complemental strand, 32835965 - 32835876
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||||| ||  |||||||||||   |||| ||||||||||||| || |||| |||||||||||||||||| |||||| |||||||    
T  32835965 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtgaaaattcagggacgaagttgatgattcactc 32835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 472
Target Start/End: Complemental strand, 38176724 - 38176647
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaa 472  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| ||||||||||||||||||    
T  38176724 aacaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 472
Target Start/End: Complemental strand, 38203948 - 38203871
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaa 472  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| ||||||||||||||||||    
T  38203948 aacaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 2854321 - 2854404
Alignment:
Q  358 ggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||||||||||||||||||||| ||| ||||||||    |||||||||||||| |||||| |||||  ||||| |||||||||    
T  2854321 ggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaa 2854404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 442
Target Start/End: Complemental strand, 40780684 - 40780596
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||||| ||||||||||||||||  | |||||||||||     |||||||||||||| ||||||||||||  ||||| |||||||||    
T  40780684 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 40780596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 36057603 - 36057698
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||| ||||||||||||||||| |  ||||||||||||    |||||||||| |||  | |||||||||  ||||| ||||||||||||||||    
T  36057603 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggcc 36057698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 35292371 - 35292505
Alignment:
Q  353 ctaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctac 452  Q
    |||||||| | |||||||||||| ||    || |||||||||  ||||||||||||||||  |||||||||||   |||| | ||| || |||||||  |    
T  35292371 ctaacggagcatttggacggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaggatgattttggccacc 35292470  T
Q  453 cctgaaaattcagggacgaaattgatggttcactc 487  Q
    | | |||||||| ||||||| ||||||||||||||    
T  35292471 cataaaaattcaaggacgaatttgatggttcactc 35292505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 351 - 447
Target Start/End: Complemental strand, 7267980 - 7267884
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttgg 447  Q
    |||||||||| ||||||||||||||||  |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| || |||||||||||    
T  7267980 cactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttgg 7267884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 17574540 - 17574476
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  17574540 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 17574476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 479
Target Start/End: Original strand, 33257759 - 33257843
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatg 479  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||||||||||| ||||||    
T  33257759 aacaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 33257843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 491
Target Start/End: Complemental strand, 35291140 - 35291044
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaat 491  Q
    |||||||||||||| ||  ||||||||||    | || ||||| |||||||||| | || ||||||||||||||||| ||||||| |||||||||||    
T  35291140 aacaaattcagggattaaattgatatttcacatagttgagggatgaatttggccgaaccgtgaaaattcagggacgacattgatgattcactcaaat 35291044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 42619381 - 42619289
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||| |||| ||  |||||||||||   |||| ||||||||| ||| || |||| |||||||||||||||||| |||||| |||||||    
T  42619381 aacaaattctgggattaaattgatatttcgcataattgagggacgaaattgaccgacccgtgaaaattcagggacgaagttgatgattcactc 42619289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 18728508 - 18728567
Alignment:
Q  291 atcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    ||||| |||||||||  ||||||||||| ||| || ||||||||||||| ||||||||||    
T  18728508 atcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaacacagca 18728567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 30468267 - 30468362
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||| ||||||  | |||||||||  ||||| || ||||||||||    
T  30468267 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaatttg 30468362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 489
Target Start/End: Complemental strand, 18726657 - 18726563
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaa 489  Q
    |||||||| ||||||||  |||||||||||   |||| ||||||||| ||||   |||| | |||||||||||||||| |||||| |||||||||    
T  18726657 aacaaattaagggactaaattgatatttcgcataattgagggacgaagttggggaacccgtaaaaattcagggacgaagttgatgattcactcaa 18726563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 34327772 - 34327674
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||| || ||||||||||||| ||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| || |||||||||||||    
T  34327772 cactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggcc 34327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 488
Target Start/End: Original strand, 38178112 - 38178218
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||  ||||  |||||||||||   |||| ||||| ||||||| || |||| |||||||| | ||||||| ||||| ||    
T  38178112 ttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtgaaaatttaaggacgaatttgatagt 38178211  T
Q  482 tcactca 488  Q
    |||||||    
T  38178212 tcactca 38178218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 488
Target Start/End: Original strand, 38205336 - 38205442
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||  ||||  |||||||||||   |||| ||||| ||||||| || |||| |||||||| | ||||||| ||||| ||    
T  38205336 ttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtgaaaatttaaggacgaatttgatagt 38205435  T
Q  482 tcactca 488  Q
    |||||||    
T  38205436 tcactca 38205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 40782211 - 40782261
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggcc 40782261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 7268065 - 7268004
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| |||||||    
T  7268065 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 7268004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 2e-91; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 278 - 487
Target Start/End: Complemental strand, 5783574 - 5783364
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5783574 tttcgtattttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaacacactaacggaccttttggacggaggga 5783475  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||| | |||| ||||||||||||||||||||    
T  5783474 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggagatgaatttggccgacccctaaaaattcagggacgaaattg 5783375  T
Q  477 atggttcactc 487  Q
    |||||||||||    
T  5783374 atggttcactc 5783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 5783807 - 5783623
Alignment:
Q  45 gagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggagaggatgatgatcttggagaagtgaaa 144  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5783807 gagaagaagatgaacgaagttaccttcaaagcagacgaaatcttccttcaaaaatgcaatcttgatcgccggagaggatgatgatcttggagaagtgaaa 5783708  T
Q  145 atggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaacataagggt 229  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5783707 atggagggaagaagaacaaacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaacataggggt 5783623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 9121658 - 9121753
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||| ||||||||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||||||||||||| ||||||    
T  9121658 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggcc 9121753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 46583546 - 46583631
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggac 439  Q
    ||||||||||||||||||||||||| || ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||    
T  46583546 taacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 46583631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 4855956 - 4856051
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||| ||||||||    
T  4855956 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggcc 4856051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 365 - 487
Target Start/End: Complemental strand, 42134605 - 42134482
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  ||||||||||||||||  |||||||||||   |||| ||||| || ||||||| |||| | |||||||    
T  42134605 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattc 42134506  T
Q  464 agggacgaaattgatggttcactc 487  Q
    | ||||||| ||||||||||||||    
T  42134505 aaggacgaatttgatggttcactc 42134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 33602632 - 33602722
Alignment:
Q  352 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    ||||||||||||||||||||||||||| || |||| |||||||    |||||||||||||| |||||||||||   ||||| |||||||||    
T  33602632 actaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaa 33602722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 34778125 - 34778223
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  ||||||||| ||    |||||||||||||| ||||||||||||  ||||| ||||||| ||||||||    
T  34778125 cactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggcc 34778223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 490
Target Start/End: Original strand, 47269475 - 47269583
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    |||||||||||   |||||||||||||  |  |||| |||||||  |||| |||||| ||||||||| || | |||||||||||||||||| ||||||||    
T  47269475 ttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtgaaaattcagggacgaatttgatggt 47269574  T
Q  482 tcactcaaa 490  Q
    |||||||||    
T  47269575 tcactcaaa 47269583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 34041828 - 34041878
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttgg 447  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  34041828 acaaattcagggactattttgattattcgttaaattgagggacgaatttgg 34041878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 488
Target Start/End: Original strand, 36895529 - 36895635
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctac-cctgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   |||| | ||||||| ||| || || | ||||||||||||||| || ||||||||    
T  36895529 ttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccgacgcgtgaaaattcagggacaaatttgatggt 36895628  T
Q  482 tcactca 488  Q
    |||||||    
T  36895629 tcactca 36895635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 487
Target Start/End: Complemental strand, 44157535 - 44157433
Alignment:
Q  386 atggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttca 484  Q
    ||||||||| |||||||||||||||||  ||||||||| |   |||| ||||| |||||||||| |||| |||||||| | ||||||  |||||||||||    
T  44157535 atggacgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccgacccgtgaaaatttaaggacgagtttgatggttca 44157436  T
Q  485 ctc 487  Q
    |||    
T  44157435 ctc 44157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 11152637 - 11152544
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    ||||||||| |||| ||  |||||||||||   |||| ||||||||| |||||| |||| |||||||||||||||||| |||||| ||||||||    
T  11152637 aacaaattctgggattaaattgatatttcgcataattgagggacgaaattggccgacccgtgaaaattcagggacgaagttgatgattcactca 11152544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 27940713 - 27940608
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  | ||||||| ||| ||  |||||||||||   |||| ||||||||||||| || |||  ||||||||||||||| |||||||||||    
T  27940713 ttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccaacctgtgaaaattcagggactaaattgatggt 27940614  T
Q  482 tcactc 487  Q
    ||||||    
T  27940613 tcactc 27940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 31803699 - 31803792
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactca 488  Q
    |||||||||||||| ||  |||||||||||   |||| | ||||||| |||||| |||| |||||||||||||||||| |||||| ||||||||    
T  31803699 aacaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactca 31803792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 489
Target Start/End: Original strand, 46638808 - 46638933
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||| ||||||||  ||||||||| ||||||  |||||||||||   |||| ||||| ||| |||||| || | |||||||||    
T  46638808 ttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccgacgcgtgaaaattc 46638907  T
Q  464 agggacgaaattgatggttcactcaa 489  Q
    ||| ||||| ||||||||||||||||    
T  46638908 aggaacgaatttgatggttcactcaa 46638933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 5784866 - 5784958
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| ||| || |||| |||||||||||||||||| |||||| |||||||    
T  5784866 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtgaaaattcagggacgaagttgatgattcactc 5784958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 45379177 - 45379085
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||| ||||| ||  |||||||||||   |||| ||||||||| |||||| |||| |||||||||||||||||| |||||| |||||||    
T  45379177 aacaaatttagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 45379085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 442
Target Start/End: Original strand, 47013072 - 47013160
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||||| ||||||||||||||||  | |||||||||||     |||||||||||||| ||||||||||||  ||||| |||||||||    
T  47013072 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 47013160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 25173031 - 25173082
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    ||||||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  25173031 acaaattcaaggactattttgatatttcgttaaattaagggataaatttggc 25173082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 6818665 - 6818763
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| | |||||  |||||||| |||||||    
T  6818665 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggcc 6818763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 34776658 - 34776608
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggcc 34776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 18183962 - 18184067
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc-taccctgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   |||| ||||| || |||||||  ||| | ||||||||  |||||| ||||||||    
T  18183962 ttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgtaaaaattcaaagacgaatttgatggt 18184061  T
Q  482 tcactc 487  Q
    ||||||    
T  18184062 tcactc 18184067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 479
Target Start/End: Original strand, 27952499 - 27952583
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatg 479  Q
    |||||||||||||| ||  |||||||||||   |||| |||||||||||||||| |||| ||| ||||||||||| || ||||||    
T  27952499 aacaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 27952583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 51122042 - 51121970
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatattt 423  Q
    ||||||| |||||||||||||||||||| |  ||||||||||| | | |||||||||||| |  |||||||||    
T  51122042 cactaacagaccttttggacggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattt 51121970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 8169568 - 8169618
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| |||||||||| || ||||| ||||||||| ||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggcc 8169618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 31238482 - 31238580
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||| || |||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| |||||| |||||||||    
T  31238482 cactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggcc 31238580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 46582099 - 46582049
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 46582049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 15104578 - 15104481
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||| ||| |||||||||||| |||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| ||| |||||||||||    
T  15104578 cactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaatttggc 15104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 487
Target Start/End: Original strand, 33685299 - 33685372
Alignment:
Q  415 ttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||   |||| ||||| ||||||| || |||| | |||||||||||||||| ||||||||||||||    
T  33685299 ttgatatttcgcataattgagggatgaatttgaccgacccgtaaaaattcagggacgaatttgatggttcactc 33685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 34778040 - 34778101
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| |||||||    
T  34778040 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 34778101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 487
Target Start/End: Complemental strand, 35478176 - 35478087
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||||| ||  ||||||||| |   |||| |||||| ||||||||| |||| |||||||||||||| ||| |||||| |||||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggatgaagttgatgattcactc 35478087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 35479994 - 35480099
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||  || ||  |||||||||||   |||| ||||| |||||||||  | || |||||||||| ||||||| ||||||||    
T  35479994 ttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattcaaggacgaagttgatggt 35480093  T
Q  482 tcactc 487  Q
    ||||||    
T  35480094 tcactc 35480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 37344565 - 37344504
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||| | |||||||    
T  37344565 tttccatcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacaacaca 37344504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 15104664 - 15104600
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||| ||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  15104664 tttccatcaaattagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacagca 15104600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 18183846 - 18183906
Alignment:
Q  287 ttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    ||||||||| ||||||| |  |||||||||||  ||||| ||||||||||||| |||||||    
T  18183846 ttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaacaca 18183906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 27087505 - 27087441
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||| ||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  27087505 tttccatcaattcagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 27087441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 33679351 - 33679259
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||| ||| ||  |||||||||||   |||| |||||||||||||||  |||| | |||||||| |||| ||||||||| |||||||    
T  33679351 aacaaattcaaggattaaattgatatttcgcataattgagggacgaatttggctgacccgtaaaaattcatggacaaaattgatgattcactc 33679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 6e-82; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 41945039 - 41944833
Alignment:
Q  23 gcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggagagga 122  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| || ||||| |    
T  41945039 gcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttaccttcaaaacagacgaaatcttccttcaaaaatgcaagcttgatcaccagagagaa 41944940  T
Q  123 tgatgatcttggagaagtgaaaatggagggaagaagaacagacagggacttagttgatgtgttctgtatgaaatatgaggatgtatggtaatggcaaaca 222  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||    
T  41944939 tgatgatcttggagaagtgaaaatggagggaagaaaaaaagacagggacttagttgatgtgttctgtataaaatgtgaggatttatggtaatggaaaaca 41944840  T
Q  223 taagggt 229  Q
    || ||||    
T  41944839 taggggt 41944833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 278 - 487
Target Start/End: Complemental strand, 41944784 - 41944576
Alignment:
Q  278 tttcgtattttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagcacactaacggaccttttggacggaggga 377  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  41944784 tttcgtattttccatcaatttagtccctgtacacgcggcttcctttttcccacgtgtacaagccaacacagcacactaacggaccttttgaacggaagga 41944685  T
Q  378 cgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattg 476  Q
    |||||||  | ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||||||||    
T  41944684 cgaaatt--tcgacgtcaaaaaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattg 41944587  T
Q  477 atggttcactc 487  Q
    |||||| ||||    
T  41944586 atggtttactc 41944576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 23774257 - 23774150
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctac-cctgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   |||| |||||||||||||||| || | |||||||||| ||||||| ||||||||    
T  23774257 ttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatttgatggt 23774158  T
Q  482 tcactcaa 489  Q
    ||||||||    
T  23774157 tcactcaa 23774150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 490
Target Start/End: Original strand, 40508899 - 40509038
Alignment:
Q  352 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta 451  Q
    ||||||||| |  ||||||||||||||    ||||||||||||  ||||||||| ||| ||  |||||||||||   |||| |||||||||||||||| |    
T  40508899 actaacggaacacttggacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccga 40508998  T
Q  452 ccc-tgaaaattcagggacgaaattgatggttcactcaaa 490  Q
    ||| |||||||||| ||||||| |||||||||||||||||    
T  40508999 cccgtgaaaattcaaggacgaatttgatggttcactcaaa 40509038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 26448923 - 26449052
Alignment:
Q  19 atgggcgaaaacgaacagagaaaaaggagaagaagatgaacgaagttatcttcaaaacatacgaaatcttccttcaaaaatgcaatcttgatcgccggag 118  Q
    ||||| ||||||||||| |||||||| | | ||||| ||| || |||| ||| |  ||||||||| ||||||||||||||| ||| |||||| |||||||    
T  26448923 atgggtgaaaacgaacatagaaaaagaaaaggaagaggaatgacgttaccttaaccacatacgaattcttccttcaaaaatccaaccttgattgccggag 26449022  T
Q  119 aggatgatgatcttggagaagtgaaaatgg 148  Q
    | ||||||||| ||||||| ||||| ||||    
T  26449023 atgatgatgattttggagaggtgaagatgg 26449052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 365 - 489
Target Start/End: Complemental strand, 48634000 - 48633875
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  ||||||||||||||||  |||||||||||   |||| | ||||||||||| || |||| |||||||||    
T  48634000 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattc 48633901  T
Q  464 agggacgaaattgatggttcactcaa 489  Q
    | ||||||| ||||||||||||||||    
T  48633900 aaggacgaatttgatggttcactcaa 48633875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 3152228 - 3152323
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||||| | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||| ||| ||||||    
T  3152228 taacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggcc 3152323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 44794341 - 44794246
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||||||| ||||||||| ||    |||||||||||||| ||||||||||||  ||||| ||||| ||| ||||||    
T  44794341 taacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggcc 44794246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 41946066 - 41946148
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||||||||||||| ||||||| |||| |   ||||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  41946066 tttggacggagggacaaaattgacggacattttacaaattcatggactattttgatatttcgttaaattgagggacaaatttg 41946148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 354 - 447
Target Start/End: Complemental strand, 2660346 - 2660253
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttgg 447  Q
    |||| ||||||||||||||||||||||| ||||||||||||    ||||||| |||||| ||||||||||||  ||||| ||||||||| ||||    
T  2660346 taacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattgg 2660253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 365 - 449
Target Start/End: Complemental strand, 30501240 - 30501156
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| |||||||| ||| |   ||||||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  30501240 ttggacggagggactaaattgattgacattttacaaattcagaaactattttgatatttcgttaaattgggggacgaatttggcc 30501156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 487
Target Start/End: Original strand, 40963369 - 40963489
Alignment:
Q  368 gacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagg 466  Q
    ||||||||||| |||||||| ||| |   |||||||||||||||||||| |||||||||||||||  || ||||||||| || |  | || |||||||||    
T  40963369 gacggagggactaaattgattgacattttacaaattcagggactattttcatatttcgttaaattggggaacgaatttgaccgattcatgcaaattcagg 40963468  T
Q  467 gacgaaattgatggttcactc 487  Q
    |||||| |||||| |||||||    
T  40963469 gacgaagttgatgattcactc 40963489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 53190766 - 53190864
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| ||||||||||||||||    
T  53190766 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggcc 53190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 487
Target Start/End: Original strand, 23888772 - 23888896
Alignment:
Q  364 tttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaatt 462  Q
    |||||||||||||||    |||||||||||   ||||||||||||||||   ||||||||||   |||| ||||||||| |||||| ||   ||||||||    
T  23888772 tttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaatt 23888871  T
Q  463 cagggacgaaattgatggttcactc 487  Q
    |||||||||| ||||||||||||||    
T  23888872 cagggacgaatttgatggttcactc 23888896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 48635372 - 48635464
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||||||| || | || ||||||||||||||||||||||||| |||||||    
T  48635372 aacaaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatgattcactc 48635464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 495
Target Start/End: Original strand, 33113199 - 33113312
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  ||||||| ||||||||  |||||||||||   |||| ||||| || ||||||| |||| | |||||||| |||| || ||||||||    
T  33113199 ttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaaggactaatttgatggt 33113298  T
Q  482 tcactcaaataaaa 495  Q
    |||||||| |||||    
T  33113299 tcactcaattaaaa 33113312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 41021022 - 41021127
Alignment:
Q  383 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggt 481  Q
    ||||||||||||  |||||||||||||  |  |||| ||||||   |||| |||||| ||||||||| || | |||||||||||||||||| ||||||||    
T  41021022 ttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacgaatttgatggt 41021121  T
Q  482 tcactc 487  Q
    ||||||    
T  41021122 tcactc 41021127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 491
Target Start/End: Complemental strand, 33111933 - 33111837
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaaat 491  Q
    |||||||||||||| ||  |||||||||||   |||| ||||| ||||||| || | || |||||||||||||||||| |||||| |||||||||||    
T  33111933 aacaaattcagggattaaattgatatttcgcataattgagggatgaatttgaccgagccgtgaaaattcagggacgaagttgatgattcactcaaat 33111837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 40508585 - 40508493
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||| ||||||   |||| ||||||||||||| || |||| |||||||||||||||||| |||||| |||||||    
T  40508585 aacaaattcagggattaaattgagatttcgcataattaagggacgaatttgtccgacccgtgaaaattcagggacgaagttgatgattcactc 40508493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 449
Target Start/End: Complemental strand, 41977876 - 41977789
Alignment:
Q  362 cttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||||||||||||| |  |||| |||||||    |||||||||||||| ||||||||||||  ||||| ||||||| ||||||||    
T  41977876 cttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggcc 41977789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 19987602 - 19987692
Alignment:
Q  352 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaa 442  Q
    |||||| ||||||||||||||||||||  | |||||||||||     ||||| |||||||| ||||||||||||  ||||| |||||||||    
T  19987602 actaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacgaa 19987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 21348860 - 21348762
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||| || ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||||  ||||| | ||||||||||||||    
T  21348860 cactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggcc 21348762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 27899088 - 27899186
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||| ||||||||||||||||| |  || |||||||||    ||||||||||||||  | |||||||||  ||||| | ||||||||||||||    
T  27899088 cactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggcc 27899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 487
Target Start/End: Original strand, 18430294 - 18430395
Alignment:
Q  387 tggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcac 485  Q
    ||||||||  ||| ||||||||||||  |||||||||||   |||| ||||| |||||||||  |||| | |||||||| ||||||| ||||||||||||    
T  18430294 tggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgttaaaattcaaggacgaatttgatggttcac 18430393  T
Q  486 tc 487  Q
    ||    
T  18430394 tc 18430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 489
Target Start/End: Original strand, 45898349 - 45898474
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||| ||||||  ||||||||| ||||||  |||||||||||   |||| |||||| || |||| | ||   |||||||||    
T  45898349 ttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattc 45898448  T
Q  464 agggacgaaattgatggttcactcaa 489  Q
    ||||||||| ||||||||||||||||    
T  45898449 agggacgaatttgatggttcactcaa 45898474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 2226074 - 2226138
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  2226074 tttccatcaatttagtccttgtacacgtggctaccttgttgacacgtgtacaagacaacacagca 2226138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 33851074 - 33850982
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||||||||||| || ||  |||||||||||   |||| ||||||||| ||| || |||| |||||||||||| |||||||||||| |||||||    
T  33851074 aacaaattcagagattaaattgatatttcggataattgagggacgaagttgaccgacccgtgaaaattcaggaacgaaattgatgattcactc 33850982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 487
Target Start/End: Original strand, 45257208 - 45257344
Alignment:
Q  352 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta 451  Q
    ||||||||| |  ||||||||||||||    || |||||||||  ||||||||||| ||||  |||||||||     |||| ||||| |||||||||| |    
T  45257208 actaacggagcacttggacggagggacattttttatggacgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccga 45257307  T
Q  452 ccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    ||| |||||||||| | ||||| ||||||||||||||    
T  45257308 cccgtgaaaattcaagaacgaatttgatggttcactc 45257344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 45897142 - 45897050
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| |||||| |||| | |||||||| ||||||| |||||| |||||||    
T  45897142 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttgatgattcactc 45897050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 487
Target Start/End: Complemental strand, 26447814 - 26447723
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttggccta-ccctgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||| ||||||||||||||||| ||||| | ||| ||||||||| || |  | || ||||| ||||||||| |||||| |||||||    
T  26447814 acaaattcagagactattttgatatttcattaaaatgaggaacgaatttgaccgattcgtgcaaatttagggacgaagttgatgattcactc 26447723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 35905719 - 35905814
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    ||||| |||| ||||||||||||||||| |  |||||| |||||    ||||||||||||||  | |||||||||  ||||| |||||||||||||    
T  35905719 cactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttg 35905814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 51454283 - 51454374
Alignment:
Q  397 acaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||  ||||| ||||||||||||   |||| ||| | |||||||||| | || |||||||||| ||||||| ||||||||||||||    
T  51454283 acaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatccgtgaaaattcaaggacgaatttgatggttcactc 51454374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 54898574 - 54898479
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttg 446  Q
    |||||||||| ||||||||||||| ||| |  |||||| |||||    ||||||||||||||  | |||||||||  ||||| |||||||||||||    
T  54898574 cactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttg 54898479  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 489
Target Start/End: Original strand, 1847644 - 1847738
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactcaa 489  Q
    |||||||||||||| ||  ||||||||| |   |||| ||||| |||||||||| |||| |||||||||| |||| || |||||| |||||||||    
T  1847644 aacaaattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttgatgattcactcaa 1847738  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 30599925 - 30600023
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    ||||||| || ||||||||||||||||| |  ||||| ||||||    ||||||||||||||  | |||||||||  ||||| |||||| |||||||||    
T  30599925 cactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggcc 30600023  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 38191984 - 38191934
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 38191934  T

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Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 38193510 - 38193560
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 38193560  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 41979352 - 41979402
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 41979402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 46308896 - 46308846
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 46308846  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 53094273 - 53094323
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 53094323  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 7884795 - 7884856
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| |||||| ||||||  ||| ||  |||||||||||| |||||||    
T  7884795 tttccatcaatttagtccttatacatgtggctgccttgttgacacgtgtacaagacaacaca 7884856  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 51684747 - 51684650
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggc 448  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||| ||||||  | ||||||| |  ||||| ||||| |||||||||    
T  51684747 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggc 51684650  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 53190681 - 53190742
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 347  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| |||||||    
T  53190681 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 53190742  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 23887290 - 23887198
Alignment:
Q  396 aacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc 487  Q
    |||||||||||||| ||  |||||||||||   |||| ||||||||| || ||| |||| | |||||||| ||||||| |||||| |||||||    
T  23887290 aacaaattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatgattcactc 23887198  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 488
Target Start/End: Original strand, 24382894 - 24383018
Alignment:
Q  365 ttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattc 463  Q
    ||||||||||||||    ||||||||||||  |||||| || ||||||  ||||||||||    |||| | ||| |||||||||| |||| | |||||||    
T  24382894 ttggacggagggacctttttgatggacgtctgacaaatccatggactaagttgatatttctcataattgaaggatgaatttggccgacccgtaaaaattc 24382993  T
Q  464 agggacgaaattgatggttcactca 488  Q
    | |||| || |||||||||||||||    
T  24382994 aaggaccaatttgatggttcactca 24383018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 30599839 - 30599903
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | |||||||||||  ||| ||  || ||||||||| ||||||||||    
T  30599839 tttccatcaatttagtccttgtacacgtggctgccttattgacatgtgtacaagacaacacagca 30599903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 33113083 - 33113135
Alignment:
Q  287 ttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaag 339  Q
    ||||||||| ||||||| |  ||||||||||| |||||| |||||||||||||    
T  33113083 ttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaag 33113135  T

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Target: scaffold0058 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 3428 - 3333
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||  ||||| |||||| || ||||||    
T  3428 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggcc 3333  T

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Target: scaffold0058; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 4600 - 4505
Alignment:
Q  354 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggcc 449  Q
    |||||||||||||||||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||  ||||| |||||| || ||||||    
T  4600 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggcc 4505  T

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Target: scaffold0477 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 6669 - 6768
Alignment:
Q  399 aaattcagggactattttgatatttcgttaaatttagggacgaatttggcctaccc-tgaaaattcagggacgaaattgatggttcactc-aaataaaaa 496  Q
    ||||||||||| ||  ||||||||||    |||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  6669 aaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggactaaattgatggttcactcgaaataaaaa 6768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 1400 - 1306
Alignment:
Q  351 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaattt 445  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | |||||||| | ||||| | ||||||||||    
T  1400 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaattt 1306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 1485 - 1421
Alignment:
Q  286 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 350  Q
    |||||||||||||||||| | ||||||||| |  ||| ||  |||||||||||| ||||||||||    
T  1485 tttccatcaatttagtccttgtacacgtggttgccttgttgacacgtgtacaagacaacacagca 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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