View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19960_high_8 (Length: 324)
Name: NF19960_high_8
Description: NF19960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19960_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 44034364 - 44034660
Alignment:
| Q |
17 |
aacctgtgcaggttaagggaatccatttatggcacaactttaaggtttattctttttcagatgtttattctcctatatgtgtaaacaatccattctggta |
116 |
Q |
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| T |
44034364 |
aacctgtgcaggttaagggaatccatttatggcacaactttaaggtttattctttttcagatgtttattctcctatatgtgtaaacaatccattctggta |
44034463 |
T |
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| Q |
117 |
taaatacacatcctctaatctcaaatttctacaaaccaaatcaaactcacttaaatcatc-----aatata--tagctacctaccttcatagaaatatgg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| |||| |
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| T |
44034464 |
taaatacacatcctctaatctcaaatttctacaaaccaaatcaaactcacttaaatcatcatcataatatagctacctacctaccttcatagaa--atgg |
44034561 |
T |
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| Q |
210 |
atttgttggcatcattaacagagaacaaaccagtagttatgttcagcaaaagcacttgtcccatgagtcacacagtgagggaactgataaggggttttg |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44034562 |
atttgttggcatcattaacagagaacaaaccagtagttatgttcagcaaaagcacttgtcccatgagtcacacagtgagggaactgataaggggttttg |
44034660 |
T |
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