View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19961_high_18 (Length: 262)
Name: NF19961_high_18
Description: NF19961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19961_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26886409 - 26886652
Alignment:
| Q |
1 |
atcttactgtaattttctggattgaattcctcttgtatacattctcgtaaccaaggannnnnnnnnnnnnaagattttcttaaacacggcttgtggcgac |
100 |
Q |
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| T |
26886409 |
atcttactgtaattttctggattgaattcctcttttatacattctcgtaaccaaggatttttcctcttt-aagattttcttaaacacggcttgtggcgtc |
26886507 |
T |
|
| Q |
101 |
tacaaagcacaagaacaacatgaacatgaattattatatcttttctttacatatatagctcaaatcaaaagtatatacaattgagaaacaaatacataca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
26886508 |
tacaaagcacaagaacaacatgaacatgaattattatttcttttctttacatatatagctcaaatcaaaagtatatacaattgagagacaaatacataca |
26886607 |
T |
|
| Q |
201 |
ttatcatacatatcaattcaattctagttgaccgagagggagctt |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26886608 |
ttatcatacatatcaattcaattctagttgaccgagagggagctt |
26886652 |
T |
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