View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19961_low_17 (Length: 292)
Name: NF19961_low_17
Description: NF19961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19961_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 5903970 - 5904178
Alignment:
| Q |
19 |
ataagtcataaattgcaaagaaatcatgattacaatacaattgaagaacgcatacatcatcaatgtgaaagaaaagacagctatgaaaccaaatttgata |
118 |
Q |
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| T |
5903970 |
ataagtcataaattgcaaagaaatcatgattacaatacatttgaacaacgtatacatcatcaatgtgaaagaaaagacagctatgaaaccaaatttgata |
5904069 |
T |
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| Q |
119 |
aatgatcataccaatttcttaaccagttgttaagaatgcaattgaaagtgtaaataaacctatgcaaccaaatgaaaataaacagaaaaaagtgtaaagt |
218 |
Q |
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| T |
5904070 |
aatgagcataccaatttcttaacc--------agaatgcaattgaaagtgtaaataaacctatgcaaccaaatgaaaataaacagaaaaaagtgtaaagt |
5904161 |
T |
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| Q |
219 |
tcataactttgtgaaag |
235 |
Q |
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||||||||||||||||| |
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| T |
5904162 |
tcataactttgtgaaag |
5904178 |
T |
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