View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19961_low_8 (Length: 434)

Name: NF19961_low_8
Description: NF19961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19961_low_8
NF19961_low_8
[»] chr7 (17 HSPs)
chr7 (16-434)||(36222212-36222635)
chr7 (7-337)||(11279401-11279736)
chr7 (16-329)||(46846320-46846639)
chr7 (16-338)||(23759608-23759936)
chr7 (16-337)||(33312913-33313239)
chr7 (20-337)||(294787-295106)
chr7 (27-210)||(23107917-23108106)
chr7 (16-337)||(6967066-6967393)
chr7 (16-337)||(17866353-17866680)
chr7 (16-139)||(17863298-17863421)
chr7 (16-245)||(24783327-24783560)
chr7 (16-337)||(3861907-3862225)
chr7 (16-139)||(36843141-36843264)
chr7 (16-215)||(23313382-23313587)
chr7 (54-139)||(9765758-9765843)
chr7 (345-415)||(36218240-36218310)
chr7 (353-409)||(35957369-35957425)
[»] chr5 (12 HSPs)
chr5 (20-329)||(33575011-33575326)
chr5 (16-337)||(15532200-15532528)
chr5 (16-332)||(15542387-15542710)
chr5 (16-240)||(26712439-26712669)
chr5 (16-240)||(26982177-26982407)
chr5 (16-254)||(34405767-34406009)
chr5 (15-329)||(14616437-14616756)
chr5 (16-337)||(22159663-22159992)
chr5 (77-332)||(11988867-11989133)
chr5 (16-245)||(7650035-7650268)
chr5 (234-337)||(26711464-26711567)
chr5 (234-337)||(26981201-26981304)
[»] chr3 (6 HSPs)
chr3 (16-338)||(22626311-22626638)
chr3 (16-337)||(11138570-11138896)
chr3 (16-337)||(39563510-39563837)
chr3 (16-139)||(13979405-13979528)
chr3 (17-134)||(46731414-46731531)
chr3 (193-298)||(20536376-20536479)
[»] chr4 (7 HSPs)
chr4 (16-337)||(12171901-12172218)
chr4 (16-337)||(2541803-2542128)
chr4 (16-254)||(647288-647530)
chr4 (16-240)||(650574-650802)
chr4 (16-138)||(26062898-26063020)
chr4 (16-136)||(26060506-26060626)
chr4 (86-136)||(11649440-11649490)
[»] chr2 (9 HSPs)
chr2 (16-327)||(31626468-31626784)
chr2 (16-337)||(31528307-31528635)
chr2 (16-238)||(16294817-16295044)
chr2 (18-337)||(13709991-13710315)
chr2 (16-338)||(40017895-40018225)
chr2 (16-339)||(23673343-23673671)
chr2 (16-337)||(36326845-36327171)
chr2 (16-139)||(32575890-32576013)
chr2 (71-133)||(8427199-8427260)
[»] chr6 (19 HSPs)
chr6 (16-337)||(13017189-13017517)
chr6 (16-329)||(22221642-22221959)
chr6 (16-329)||(22247477-22247794)
chr6 (16-226)||(30978322-30978539)
chr6 (16-337)||(14790537-14790864)
chr6 (16-337)||(14795565-14795892)
chr6 (16-139)||(20527367-20527490)
chr6 (16-213)||(15534975-15535177)
chr6 (16-211)||(16883594-16883795)
chr6 (20-139)||(32704458-32704577)
chr6 (16-138)||(19664870-19664991)
chr6 (16-139)||(1838393-1838515)
chr6 (16-137)||(7769594-7769715)
chr6 (16-124)||(12980711-12980818)
chr6 (72-139)||(27649077-27649144)
chr6 (17-124)||(12983598-12983704)
chr6 (145-211)||(11183962-11184028)
chr6 (165-211)||(15540643-15540689)
chr6 (77-121)||(32427281-32427325)
[»] scaffold0440 (1 HSPs)
scaffold0440 (16-329)||(9781-10101)
[»] scaffold0264 (1 HSPs)
scaffold0264 (16-329)||(24193-24510)
[»] chr8 (6 HSPs)
chr8 (22-331)||(12575306-12575620)
chr8 (16-215)||(41778864-41779068)
chr8 (77-213)||(14418445-14418585)
chr8 (16-139)||(13096940-13097062)
chr8 (47-137)||(44008245-44008335)
chr8 (86-136)||(41836429-41836479)
[»] chr1 (17 HSPs)
chr1 (17-215)||(34066264-34066468)
chr1 (16-337)||(13493181-13493508)
chr1 (16-339)||(10764838-10765167)
chr1 (16-139)||(39546161-39546284)
chr1 (20-332)||(1936549-1936869)
chr1 (16-329)||(13495906-13496224)
chr1 (16-135)||(32506062-32506181)
chr1 (16-139)||(27282311-27282434)
chr1 (45-216)||(16190299-16190475)
chr1 (16-137)||(21153174-21153295)
chr1 (16-124)||(22456711-22456818)
chr1 (24-124)||(49147825-49147924)
chr1 (145-214)||(8435289-8435358)
chr1 (16-137)||(15297251-15297371)
chr1 (342-409)||(18125078-18125145)
chr1 (16-57)||(22453421-22453462)
chr1 (150-209)||(23990262-23990322)
[»] scaffold0063 (1 HSPs)
scaffold0063 (19-136)||(7199-7316)
[»] scaffold0352 (1 HSPs)
scaffold0352 (16-139)||(2807-2930)
[»] scaffold0500 (1 HSPs)
scaffold0500 (16-136)||(2610-2732)
[»] scaffold0567 (1 HSPs)
scaffold0567 (20-139)||(6014-6133)
[»] scaffold0363 (1 HSPs)
scaffold0363 (77-213)||(133-273)


Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 16 - 434
Target Start/End: Complemental strand, 36222635 - 36222212
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||| | || ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  36222635 taggtcaagagattaggtaaaattactaagttaatttgtagtgaaactaaataatcattgattgaactaggagtgaaaattaccataggagaacttcgga 36222536  T
Q  116 agattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagg 210  Q
     |||||||| ||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36222535 ggattcgaaggacttaaccatacttctctcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttagaaaatcaactcaactgcctagg 36222436  T
Q  211 gcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaa 310  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||  ||||||    
T  36222435 gcaccaatataaattttatacatcctttttaataatgaaattgctacgtagaaattaaatacaatcctcgtggtaacgaatttttattacttcaattgaa 36222336  T
Q  311 tttggttcacttgccaaatatccatcacacgaatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctat 410  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36222335 tttggttcatttgccaaatatccatcacacgaatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctat 36222236  T
Q  411 ccacagacaagtaatttcaacaat 434  Q
    ||||||||||||||||||||||||    
T  36222235 ccacagacaagtaatttcaacaat 36222212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 7 - 337
Target Start/End: Original strand, 11279401 - 11279736
Alignment:
Q  7 ggagaagcataggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgag 106  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | |||    
T  11279401 ggagaatcctaggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcatttattgaactaggagtgcaaattaccagaggag 11279500  T
Q  107 aacttcggaagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaa 201  Q
    ||||||| |||||||||| ||||||||||||||     ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  11279501 aacttcgaaagattcgaaggacttaaccatacttctctcaatcttctaaaaaccaatctttattcgtttttaatcagtttatgttacaaaatcaactcaa 11279600  T
Q  202 ctgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattact 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| | |||| || ||||| |||||||||||||    
T  11279601 ctgcctagggcaccaatataaattttatacatcctttttaataatgaaattgctaagtagaaattaaatatagtccttgtggaaacaaatttttattact 11279700  T
Q  302 tggattgaatttggttcacttgccaaatatccatca 337  Q
    | |||||||||||||||||||||||||||| |||||    
T  11279701 tcgattgaatttggttcacttgccaaatattcatca 11279736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 329
Target Start/End: Complemental strand, 46846639 - 46846320
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  46846639 taggtcaagagattgggtagaattattaggttaatctgtcgtgaaactaaataatcattgattgaactaggagtgcaaattaccatagaagaacttcgga 46846540  T
Q  116 agattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaa-tcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| ||||||||||||||     |||| ||||||||||||||||||  |||||||| | |||||||||  ||  || |||||||||||||||||    
T  46846539 ggattcgaaggacttaaccatacttctctcaattttctaaaaaccaatcttttattgttttttagtcagtttataataagaattcaactcaactgcctag 46846440  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattga 309  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| |||||  ||||||||||||| ||||||    
T  46846439 ggcaccaatataaattttatacatcctttttaataatgaaattgctaagtagaaattaaatacagtcctcgtggaaacatatttttattacttcgattga 46846340  T
Q  310 atttggttcacttgccaaat 329  Q
    || || ||||||||||||||    
T  46846339 atctgattcacttgccaaat 46846320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 16 - 338
Target Start/End: Complemental strand, 23759936 - 23759608
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| | | | ||||||||||||||||||| |||| ||| ||    
T  23759936 tagggcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 23759837  T
Q  115 aagattcgaatgacttaaccatact-----caatcttct-aaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | |||||||| ||||||||||||||     | || |||| ||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  23759836 aggattcgaaggacttaaccatacttctctcgattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 23759737  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggatt 307  Q
    ||||||||||||||| |||||||||||||||||| ||| || |||||| |||||| ||||||||| |||||||||||||||| |||||||||||| ||||    
T  23759736 gggcaccaatataaa-tttatacatcctttttaa-aatgaatttgctaagtagaagttaaatacagtcctcgtagaaacgaactttttattacttcgatt 23759639  T
Q  308 gaatttggttcacttgccaaatatccatcac 338  Q
    ||||||||||||||||||||||||| |||||    
T  23759638 gaatttggttcacttgccaaatatctatcac 23759608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 33312913 - 33313239
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||| ||||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||  ||||||||||||| |||| |||| ||    
T  33312913 taggtcaaaagattgggtagaattactaagttaattcgtcgtgaaactaaataatcattgattgaattaggaaagcaaattaccataggagagcttcaga 33313012  T
Q  116 agattcgaatgacttaaccata-----ctca-atcttctaaaaaccaatctttctttgtttttaat-cagtttatgttacaaaatcaactcaactgccta 208  Q
     |||||||| |||||||||||      |||| || |||||||| |||||| ||  || |||||||| | |||||||||||||||||||||||||||||||    
T  33313013 ggattcgaaggacttaaccatttttctctcagattttctaaaa-ccaatcctttattatttttaattccgtttatgttacaaaatcaactcaactgccta 33313111  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattg 308  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| || |||||| |||||||||||||||||||||||||||| |||||    
T  33313112 gggcaccaatataaattttacacatcctttttaataatgaaattgctaagtagaagtt-aatacagtcctcgtagaaacgaatttttattacttcgattg 33313210  T
Q  309 aatttggttcacttgccaaatatccatca 337  Q
    |||||| |||||||  |||||||| ||||    
T  33313211 aatttgtttcacttctcaaatatctatca 33313239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 20 - 337
Target Start/End: Original strand, 294787 - 295106
Alignment:
Q  20 tcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagat 119  Q
    |||||||||||| || |||||||  |||||||||||||  ||||| |||||||||||||| | |||||||||||||||||||| |||||||||||| |||    
T  294787 tcaagagattgggtataattactttgttaatctgtcgttgaattagataatcattgattgcattaggagtgcaaattaccataggagaacttcggaggat 294886  T
Q  120 tcgaatgacttaaccata-----ctcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcac 214  Q
    ||||| ||||||||||||     |||||| |||| |||||||||| || |||| |||||| ||| ||||||||||||| |||||  ||||||| |||||     
T  294887 tcgaaagacttaaccatacttctctcaattttct-aaaaccaatccttatttgcttttaaccagcttatgttacaaaa-caact--actgcctcgggcat 294982  T
Q  215 caatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaattt 313  Q
    ||||||||||||  |||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| || || || |||||||||||| ||||||||||    
T  294983 caatataaatttattacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggacacaaattttttattacttcgattgaattt 295082  T
Q  314 ggttcacttgccaaatatccatca 337  Q
    ||||||||||||||||||||||||    
T  295083 ggttcacttgccaaatatccatca 295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 23107917 - 23108106
Alignment:
Q  27 attggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatg 126  Q
    ||||| |||| ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||| |    
T  23107917 attgggtagagttactaagttaatctgttgtgaaactaaataatcattgtttgaactaggagtgcaaattaccataggagagcttcggatgattcgaagg 23108016  T
Q  127 acttaacca---tactc---aatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaa-atcaactcaactgcctagg 210  Q
     ||||||||   | |||   ||| |||| |||||||||||||  |||||||||||  |||||||||||||| ||||||||||||| |||||    
T  23108017 tcttaaccacatttctctctaattttct-aaaaccaatcttttattgtttttaattcgtttatgttacaaacatcaactcaactgtctagg 23108106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 6967066 - 6967393
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    ||||| |||||||||| ||||||||||  |||||||| |||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  6967066 taggttaagagattgggtagaattactttgttaatctatcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 6967165  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| ||||||||||||||||    
T  6967166 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 6967263  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa--tttttattacttggat 306  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||  || ||| ||||| |||    
T  6967264 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgat 6967362  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
     |  |||||| ||||||||||||||| ||||    
T  6967363 agcttttggtacacttgccaaatatctatca 6967393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 337
Target Start/End: Complemental strand, 17866680 - 17866353
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  17866680 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 17866581  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | || |||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| || |||||||||||||    
T  17866580 ggattcgaaggtctaaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-cagctcaactgcctag 17866483  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa--tttttattacttggat 306  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||  || ||| ||||| |||    
T  17866482 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgat 17866384  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
     |  |||||| ||||||||||||||| ||||    
T  17866383 agcttttggtacacttgccaaatatctatca 17866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17863421 - 17863298
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  17863421 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 17863322  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  17863321 ggattcgaaggtcttaaccatact 17863298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 24783327 - 24783560
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| || |||||||  |||||||| |||| ||| || |||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  24783327 taggtcaagagattgggtataattactttgttaatctctcgttaaactagataatcattgattgaattaggaatgaaaattaccatatgagaacttcgga 24783426  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     ||||| || | ||||||||||||       ||| |||| |||||||| ||||  |||||||   | |||||||||||||||| |||||||||||||| |    
T  24783427 ggattcaaaggtcttaaccatacttctctctaatattcttaaaaccaa-cttttattgttttatttaagtttatgttacaaaa-caactcaactgccttg 24783524  T
Q  210 ggc-accaatataaattttatacatcctttttaataa 245  Q
    | | | ||||||||| |||||||||||||||| ||||    
T  24783525 gacaatcaatataaa-tttatacatcctttttgataa 24783560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 337
Target Start/End: Complemental strand, 3862225 - 3861907
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  |||||||||||||  || || |||||||||  ||||| ||||||||||        || |||||||||| |    
T  3862225 taggtcaagagattgggtagaattactttgttaatctgtcgttgaactagataatcatttcttgaattaggagtgca--------taggagaacttcgaa 3862134  T
Q  116 agattcgaatgacttaaccatactc------aatcttctaaaaaccaatctttctttgtttttaatcagtttatgttac--aaaatcaactcaactgcct 207  Q
     |||||||| | ||||| ||||||       ||| || ||||| |||||||||  ||||||||||||||||||||||||  |||||||| | ||||||||    
T  3862133 ggattcgaaggtcttaatcatacttctctctaattttataaaa-ccaatcttttattgtttttaatcagtttatgttacaaaaaatcaattgaactgcct 3862035  T
Q  208 agggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggat 306  Q
    |||||| ||   | ||||| |||||||| |||||||||| ||||||||| |||||| ||||  ||||||||||| || || |||| |||||||||| |||    
T  3862034 agggcatca--ttgaatttaatacatcc-ttttaataatgaaattgctaagtagaagttaataacaatcctcgtggatacaaattatttattacttcgat 3861938  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
    ||| | | || ||||||||||||||| ||||    
T  3861937 tgactctagtacacttgccaaatatctatca 3861907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 36843264 - 36843141
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| ||| |  |||||||||||||  || || |||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  36843264 taggtcaagagattgggtagagttaatttgttaatctgtcgttgaactagataatcattgattgaagtaggagtgcgaattaccataggagaacttcgga 36843165  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  36843164 ggattcgaaggtcttaaccatact 36843141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 23313587 - 23313382
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||| ||||||||||| |||| ||||   |||||| ||| |||||  || |||||||||| ||||| ||| |||||||||||||||| ||||||||||||    
T  23313587 taggccaagagattgggtagagttacagtgttaatatgttgtgaacctagataatcattgtttgaattagtagtgcaaattaccataggagaacttcgga 23313488  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgccta 208  Q
     ||||| || | ||||||||||||       ||| |||| ||||||| |||||  |||||||||||  ||||||||||| |||||||| |||||| ||||    
T  23313487 ggattcaaaggtcttaaccatacttctctctaattttct-aaaaccattcttttattgtttttaattcgtttatgttacaaaaatcaattcaactaccta 23313389  T
Q  209 gggcacc 215  Q
    |||||||    
T  23313388 gggcacc 23313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 9765758 - 9765843
Alignment:
Q  54 tcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccatact 139  Q
    |||||||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| || |||||||| | ||||||||||||    
T  9765758 tcgtgaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcagaggattcgaaggtcttaaccatact 9765843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 415
Target Start/End: Complemental strand, 36218310 - 36218240
Alignment:
Q  345 atattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccaca 415  Q
    ||||||| | ||||||| ||||||||||||||||||||| | || |||||| |||||||| | ||||||||    
T  36218310 atattctctggcaatatgctctagcttttcacttccatttatgggttgaactaatccaaggggtatccaca 36218240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 35957369 - 35957425
Alignment:
Q  353 ttgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagcta 409  Q
    |||||||| | || ||||||||||||||||| | ||||||||| |||||||| ||||    
T  35957369 ttgcaatactttccagcttttcacttccatttagggattgaactaatccaagggcta 35957425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 329
Target Start/End: Original strand, 33575011 - 33575326
Alignment:
Q  20 tcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattg-aactaggagtgcaaattaccatatgagaacttcggaaga 118  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||||| ||    
T  33575011 tcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgattgtaattaggagtgcaaattaccataggagagcttcggagga 33575110  T
Q  119 ttcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggca 213  Q
    |||||| ||||||||||||||     |||| ||||||||||||||  ||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33575111 ttcgaaggacttaaccatacttctctcaattttctaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggca 33575210  T
Q  214 ccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatt 312  Q
    |||||||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||  ||||||| |||||||||||| |||||||||    
T  33575211 ccaatataaa-tttatacatcctttttaataataaaattgctaaatagaagttaaatacagtcctcgtgaaaacgaattttttattacttcgattgaatt 33575309  T
Q  313 tggttcacttgccaaat 329  Q
    |||||||||||||||||    
T  33575310 tggttcacttgccaaat 33575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 16 - 337
Target Start/End: Complemental strand, 15532528 - 15532200
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | | ||||||||||||||||| | |||| |||  |    
T  15532528 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccacaggagagctttag 15532429  T
Q  115 aagattcgaatgacttaaccatact-----caatcttct-aaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | |||||||| ||||||||||||||     |||| |||| ||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  15532428 aggattcgaaggacttaaccatacttctctcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 15532329  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggatt 307  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| |||||||| |||||||||||| |||     
T  15532328 gggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaattttttattacttcgatc 15532230  T
Q  308 gaatttggttcacttgccaaatatccatca 337  Q
    ||||||||||||| ||||||||||| ||||    
T  15532229 gaatttggttcacatgccaaatatctatca 15532200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 332
Target Start/End: Complemental strand, 15542710 - 15542387
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | | ||||||||||||||||| | |||| |||  |    
T  15542710 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccacaggagagctttag 15542611  T
Q  115 aagattcgaatgacttaaccatact-----caatcttct-aaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | |||||||| ||||||||||||||     |||| |||| ||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  15542610 aggattcgaaggacttaaccatacttctctcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 15542511  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggatt 307  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| || |||||| ||||||||| ||||||| |||||||| |||||||||||| |||     
T  15542510 gggcaccaatataaa-tttatacatcctttttaataatgaaattgttaagtagaagttaaatacagtcctcgtggaaacgaattttttattacttcgatc 15542412  T
Q  308 gaatttggttcacttgccaaatatc 332  Q
    |||||||||||||||||||||||||    
T  15542411 gaatttggttcacttgccaaatatc 15542387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 26712669 - 26712439
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||| | |||||    
T  26712669 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtgcaaattatcataggagagcgtcgga 26712570  T
Q  116 agattcgaatgacttaaccat-----actca-atcttctaaaaaccaatctttctttgtttttaa-tcagtttatgttacaaaatcaactcaactgccta 208  Q
     |||||||| |||||||||||      |||| || |||| |||||||||||||   | ||||||| |  ||||||||||||||||||||||||||| |||    
T  26712569 ggattcgaaagacttaaccattcttctctcagattttct-aaaaccaatcttttactatttttaattttgtttatgttacaaaatcaactcaactgtcta 26712471  T
Q  209 gggcaccaatataaattttatacatccttttt 240  Q
    |||||| ||||||||||||| |||||||||||    
T  26712470 gggcactaatataaattttacacatccttttt 26712439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 26982407 - 26982177
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||| | |||||    
T  26982407 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtgcaaattatcataggagagcgtcgga 26982308  T
Q  116 agattcgaatgacttaaccat-----actca-atcttctaaaaaccaatctttctttgtttttaa-tcagtttatgttacaaaatcaactcaactgccta 208  Q
     |||||||| |||||||||||      |||| || |||| |||||||||||||   | ||||||| |  ||||||||||||||||||||||||||| |||    
T  26982307 ggattcgaaagacttaaccattcttctctcagattttct-aaaaccaatcttttactatttttaattttgtttatgttacaaaatcaactcaactgtcta 26982209  T
Q  209 gggcaccaatataaattttatacatccttttt 240  Q
    |||||| ||||||||||||| |||||||||||    
T  26982208 gggcactaatataaattttacacatccttttt 26982177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 34405767 - 34406009
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  34405767 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 34405866  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||| ||| | ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  |||||||||||| || ||||||||||||||||    
T  34405867 ggatttgaaggtcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacacaa-caactcaactgcctag 34405964  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgc 254  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||    
T  34405965 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgc 34406009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 329
Target Start/End: Complemental strand, 14616756 - 14616437
Alignment:
Q  15 ataggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgg 114  Q
    ||||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  14616756 ataggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgattgaattaggagtgaaaattaccataggagaacttcgg 14616657  T
Q  115 aagattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | ||||| || | ||||||||||||       ||| |||| |||| ||| ||||  |||||||   |  ||||||||||||||| |||||||||| ||||    
T  14616656 aggattcaaaggtcttaaccatacttctctctaatattcttaaaatcaa-cttttattgttttatttacgtttatgttacaaaa-caactcaacttccta 14616559  T
Q  209 ggg-caccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt--tttattacttgga 305  Q
    |||  | ||||||||| || ||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||||  |||||||||| ||    
T  14616558 gggtaatcaatataaa-ttcatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcga 14616460  T
Q  306 ttgaatttggttcacttgccaaat 329  Q
    | |  |||||||||||||||||||    
T  14616459 tag-ttttggttcacttgccaaat 14616437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 22159663 - 22159992
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| |||||  |||||||| ||||  || || ||| |||||||||||||||||||||| | |||||||| ||||||||||||    
T  22159663 taggtcaagagattgggtagagttactttgttaatctatcgttgaactagatagtcattgattgaactaggagtgcgatttaccataggagaacttcgga 22159762  T
Q  116 agattcgaatgacttaaccata---ctc---aatcttctaaaaaccaatctttctttgtttttaatcagtttatgtta-caaaatcaactcaactgccta 208  Q
     ||||| || | ||||||||||   |||   ||| |||| ||||||||| |||  |||||||   |  |||||  |||  |||| |||  ||||||||||    
T  22159763 ggattcaaaggtcttaaccatatttctctctaatattcttaaaaccaat-ttttattgttttatttacgtttactttataaaaaccaatccaactgccta 22159861  T
Q  209 gggcaccaatataaattt--tatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttgga 305  Q
    ||||| |  | | |||||  |||||||||||||| | ||  ||||||||| |||||| ||||||||| ||||||| ||||| || |||||||||||| ||    
T  22159862 gggcaac-ctttgaatttaatatacatcctttttgacaaagaaattgctaagtagaagttaaatacagtcctcgtggaaacaaattttttattacttcga 22159960  T
Q  306 ttgaatttggttcacttgccaaatatccatca 337  Q
    | ||||||||| |||||| |||||||| ||||    
T  22159961 tcgaatttggtacacttgtcaaatatctatca 22159992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 77 - 332
Target Start/End: Complemental strand, 11989133 - 11988867
Alignment:
Q  77 ttgaactaggagtgcaaattaccatat--gagaacttcggaagattcgaatgacttaaccatactc------aatcttctaaaaaccaatctttctttgt 168  Q
    |||||||||||||||||||||||||||  |||||||| ||| |||||||| | ||||||| ||||       ||| |||||||| | |||||||  | ||    
T  11989133 ttgaactaggagtgcaaattaccatataggagaactttggaggattcgaaggtcttaaccttacttctctctaattttctaaaatc-aatcttttatcgt 11989035  T
Q  169 ttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacg--tagaatt 265  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||| |  |  |  ||||| ||||| ||| |||| ||||||||| |  ||||| |    
T  11989034 ttttaatctgtttatgttacaaaaatcaactcaactgcctaggggaccattgaatttaatatacgtccttattactaatgaaattgctaagtatagaagt 11988935  T
Q  266 taaatacaatcctcgtagaaacgaatt-tttattacttggattgaatttggttcacttgccaaatatc 332  Q
    |||  ||  | ||||| |||||||||| |||||||||| ||||||||||| |||||||| ||||||||    
T  11988934 taagaacggttctcgtggaaacgaattatttattacttcgattgaatttgattcacttgtcaaatatc 11988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 7650268 - 7650035
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    ||||| |||||||||  |||||||||   |||||||| || | ||| || |||||||||||||||| ||||||||||||||||||||  ||||||||| |    
T  7650268 taggtaaagagattgagtagaattaccttgttaatctatctttaaactagataatcattgattgaattaggagtgcaaattaccatagaagaacttcgta 7650169  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     ||||| |||| ||||||||||||       ||| |||| |||| ||| ||||  |||||||   |  ||||||||||||||| ||||||||||||||||    
T  7650168 ggattcaaatgtcttaaccatacttctctctaatattcttaaaagcaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 7650071  T
Q  210 ggc-accaatataaattttatacatcctttttaataa 245  Q
    ||| | ||||||||| |||||||||||||||| ||||    
T  7650070 ggcaatcaatataaa-tttatacatcctttttgataa 7650035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 26711567 - 26711464
Alignment:
Q  234 cctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattttt-attacttggattgaatttggttcacttgccaaatatc 332  Q
    ||||||| ||||| ||||||||| |||||| |||| |||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26711567 cctttttgataatgaaattgctaagtagaagttaa-tacagtcctcgtggaaacgaattttttattacttcaattgaatttggttcacttgccaaatatc 26711469  T
Q  333 catca 337  Q
     ||||    
T  26711468 tatca 26711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 26981304 - 26981201
Alignment:
Q  234 cctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattttt-attacttggattgaatttggttcacttgccaaatatc 332  Q
    ||||||| ||||| ||||||||| |||||| |||| |||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26981304 cctttttgataatgaaattgctaagtagaagttaa-tacagtcctcgtggaaacgaattttttattacttcaattgaatttggttcacttgccaaatatc 26981206  T
Q  333 catca 337  Q
     ||||    
T  26981205 tatca 26981201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 7e-96; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 16 - 338
Target Start/End: Complemental strand, 22626638 - 22626311
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | | | ||||||||||||||||||| |||| ||| ||    
T  22626638 taggtcaagagattggatagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 22626539  T
Q  115 aagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
    | |||||||| ||||||||||||||     |||| |||||||  | | ||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  22626538 aggattcgaaggacttaaccatacttctctcaattttctaaatccaattctttatt-gtttttaatcagtttatgttactaaatcaactcaactgcctag 22626440  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattg 308  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| |||||||| |||||||||||| ||| |    
T  22626439 ggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaactttttattacttcgatcg 22626341  T
Q  309 aatttggttcacttgccaaatatccatcac 338  Q
    |||||||||||||||||||||||| |||||    
T  22626340 aatttggttcacttgccaaatatctatcac 22626311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 337
Target Start/End: Complemental strand, 11138896 - 11138570
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | | | ||||||||||||||||||| |||| ||| ||    
T  11138896 taggtcaagagattggatagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 11138797  T
Q  115 aagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
    | |||||||| ||||||||||||||     |||| |||| ||  | | ||| | || |||||||||||||||||||||| ||||||||||||||||||||    
T  11138796 aggattcgaaggacttaaccatacttctctcaattttctgaatccaattctatatt-gtttttaatcagtttatgttactaaatcaactcaactgcctag 11138698  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattg 308  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| |||||||| |||||||||||| ||| |    
T  11138697 ggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaactttttattacttcgatcg 11138599  T
Q  309 aatttggttcacttgccaaatatccatca 337  Q
    |||||||||||||||||||||||| ||||    
T  11138598 aatttggttcacttgccaaatatctatca 11138570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 16 - 337
Target Start/End: Complemental strand, 39563837 - 39563510
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| |||| | |||||    
T  39563837 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataaccattgattgaattaggagtgcaaattatcataggagagcgtcgga 39563738  T
Q  116 agattcgaatgacttaaccatact-----ca-atcttctaaaaaccaatctttctttgtttttaatca-gtttatgttacaaaatcaactcaactgccta 208  Q
     |||||||| ||||||||||| ||     || || |||||||| |||||||||   | ||||||||   |||||||||||||||||||||||||||||||    
T  39563737 ggattcgaaggacttaaccattcttctctcagattttctaaaa-ccaatcttttactatttttaattttgtttatgttacaaaatcaactcaactgccta 39563639  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggatt 307  Q
    |||||| ||||||||||||| ||||||||||| ||||| ||||||||| |||||| || |||||| ||||||| |||||||| |||||||||||| ||||    
T  39563638 gggcactaatataaattttacacatccttttttataatgaaattgctaagtagaagtt-aatacagtcctcgtggaaacgaattttttattactttgatt 39563540  T
Q  308 gaatttggttcacttgccaaatatccatca 337  Q
    ||||||||||||||||||||||||| ||||    
T  39563539 gaatttggttcacttgccaaatatctatca 39563510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 13979405 - 13979528
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||| |||| |||||||    
T  13979405 taggtcaagggattggatagagttactaagttaatctgtcatgaaactaaataatcattgtttgaacttggagtgcaaattaccataggagagcttcgga 13979504  T
Q  116 agattcgaatgacttaaccatact 139  Q
     ||||| || | ||||||||||||    
T  13979505 ggattcaaaggtcttaaccatact 13979528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 46731414 - 46731531
Alignment:
Q  17 aggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaa 116  Q
    ||||||||||||||| |||| |||||  |||||| ||||||  || || |||||||||||||||| |||||||||||||||||||||||||||||||||     
T  46731414 aggtcaagagattgggtagagttactttgttaatatgtcgttgaactagataatcattgattgaattaggagtgcaaattaccatatgagaacttcggag 46731513  T
Q  117 gattcgaatgacttaacc 134  Q
    |||||||| | |||||||    
T  46731514 gattcgaaggtcttaacc 46731531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 20536479 - 20536376
Alignment:
Q  193 tcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt 292  Q
    ||||| |||||||||||||||||  |   |||||  |||||||||||||||||| ||||| ||| |||||| ||||||||| ||||||| || ||||  |    
T  20536479 tcaacccaactgcctagggcacccttg--aatttactacatcctttttaataatgaaatttctaagtagaagttaaatacagtcctcgtggatacgatct 20536382  T
Q  293 tttatt 298  Q
    ||||||    
T  20536381 tttatt 20536376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 3e-92; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 12171901 - 12172218
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| | | ||||||||||||||||||| | || ||||||    
T  12171901 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgattgtatttaggagtgcaaattaccataggcgagcttcgg 12172000  T
Q  115 aagattcgaatgacttaaccatactcaatcttctaaaaaccaa-tctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggca 213  Q
    ||||||| || ||||||||||||||      |||| ||||||| ||||| || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  12172001 aagattccaaggacttaaccatact------tctagaaaccaaatctttatt-gtttttaatcagtttatgttactaaatcaactcaactgcctagggca 12172093  T
Q  214 ccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacga--atttttattacttggattgaat 311  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| |||||||   |||||||||||| ||| ||||    
T  12172094 ccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgatcttttttattacttcgatcgaat 12172192  T
Q  312 ttggttcacttgccaaatatccatca 337  Q
    ||||||||||||||||||||| ||||    
T  12172193 ttggttcacttgccaaatatctatca 12172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 2541803 - 2542128
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    ||||||||||||||||||| |||||||  |||||||||||||  || || |||||||||| ||||| ||||||| |||||||||||| ||||||||| ||    
T  2541803 taggtcaagagattggataaaattactttgttaatctgtcgtttaactagataatcattgcttgaaataggagtacaaattaccataagagaacttcaga 2541902  T
Q  116 agattcgaatgacttaaccatac----tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaa-aatcaactcaactgcctagg 210  Q
     |||||||| | |||||||||||    | ||| ||| ||||||| || |||  |||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  2541903 ggattcgaaggtcttaaccatacctctttaattttcaaaaaacctatattttattgtttttaatccgtttatgttacaagaataaactcaactgcctagg 2542002  T
Q  211 gcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggattga 309  Q
    ||||||   | ||||| ||||||||||||||||||| ||||||||  |||||| ||||||||| ||||||| || ||||||| |||||||||| ||||||    
T  2542003 gcacca--ttgaatttaatacatcctttttaataatgaaattgctcagtagaagttaaatacagtcctcgtggatacgaattatttattacttcgattga 2542100  T
Q  310 atttggttcacttgccaaatatccatca 337  Q
     |||||| ||||||||||||||| ||||    
T  2542101 ctttggtacacttgccaaatatctatca 2542128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 647530 - 647288
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  647530 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 647431  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     ||||||||   ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| |||||||| |||||||    
T  647430 ggattcgaagatcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaaatgcctag 647333  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgc 254  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||    
T  647332 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgc 647288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 650802 - 650574
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  650802 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 650703  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | ||||||||||||       ||| || | |||||||| ||||  |||||||   |  ||||||||||||||| |||||||| |||||||    
T  650702 ggattcgaaggtcttaaccatacttctctctaatattatgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaaatgcctag 650605  T
Q  210 ggc-accaatataaattttatacatccttttt 240  Q
    ||| | ||||||||| ||||||||||||||||    
T  650604 ggcaatcaatataaa-tttatacatccttttt 650574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 26063020 - 26062898
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| |||||  |||||||||||||  || || |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  26063020 taggtcaagagattgggtagagttactttgttaatctgtcgttgaactagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 26062921  T
Q  116 agattcgaatgacttaaccatac 138  Q
     ||||| || | |||||||||||    
T  26062920 ggattcaaaggtcttaaccatac 26062898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 26060506 - 26060626
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| |||||  |||||||| ||| |||  || |||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  26060506 taggtcaagagattgggtagagttactttgttaatctatcgggaagctagataatcattgcttgaattaggagtgcaaattaccataggagaacttcgga 26060605  T
Q  116 agattcgaatgacttaaccat 136  Q
     |||||||| | |||||||||    
T  26060606 ggattcgaaggtcttaaccat 26060626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 11649490 - 11649440
Alignment:
Q  86 gagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccat 136  Q
    ||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  11649490 gagtgcaaattaccataggagaacttcggaggattcgaaggtcttaaccat 11649440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 31626468 - 31626784
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||| |||||||    
T  31626468 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataataattgattgaattaggagtgcaaattaccataggagagcttcgga 31626567  T
Q  116 agattcgaatgacttaaccatact-----ca-atcttctaaaaaccaatctttctttgtttttaat-cagtttatgttacaaaatcaactcaactgccta 208  Q
     |||||||||||||||||||| ||     || || |||||||| |||||| ||  || |||||||| |  ||||||||||||||||||||||||||||||    
T  31626568 ggattcgaatgacttaaccattcttctctcagattttctaaaa-ccaatcctttattatttttaattccttttatgttacaaaatcaactcaactgccta 31626666  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattg 308  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| || |||||| ||||| | |||||||||||||||||||| |||||    
T  31626667 gggcaccaatataaattttacacatcctttttaataatgaaattgctaagtagaagtt-aatacagtcctcattgaaacgaatttttattacttcgattg 31626765  T
Q  309 aatttggttcacttgccaa 327  Q
    |||||||||||||| ||||    
T  31626766 aatttggttcacttaccaa 31626784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 31528307 - 31528635
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | | ||||||||||||||||| | |||| |||  |    
T  31528307 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccacaggagagctttag 31528406  T
Q  115 aagattcgaatgacttaaccatact-----caatcttct-aaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | |||||||| ||||||||||||||     |||| |||| ||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  31528407 aggattcgaaggacttaaccatacttctctcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 31528506  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggatt 307  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| ||||| || |||||||||||| |||     
T  31528507 gggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacaaattttttattacttcgatc 31528605  T
Q  308 gaatttggttcacttgccaaatatccatca 337  Q
    ||||||||||||||||||||||||| ||||    
T  31528606 gaatttggttcacttgccaaatatctatca 31528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 16294817 - 16295044
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  16294817 taggtcaagagattgggtagaattactaagttaatctgtcgtgaaactaaataatcattgattaaactaggagtgcaaattaccataggagaacttcgga 16294916  T
Q  116 agattcgaatgacttaaccata-----ctcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagg 210  Q
     |||||||| ||||||||||||     |||||| |||| ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  16294917 ggattcgaaggacttaaccatacttctctcaattttctgaaaactaatctttatttgtttttaatcggtttatgatacaaaatcaactcaactgcctagg 16295016  T
Q  211 gcaccaatataaattttatacatccttt 238  Q
    ||| ||||||||||||||||||||||||    
T  16295017 gcatcaatataaattttatacatccttt 16295044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 18 - 337
Target Start/End: Original strand, 13709991 - 13710315
Alignment:
Q  18 ggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaactt-cggaa 116  Q
    ||||||||||| || ||||||||||  |||||||||| ||  || || ||||||||||  | || ||||||||||||||| |||| |||| ||| | ||     
T  13709991 ggtcaagagatcgggtagaattactttgttaatctgttgttgaactagataatcattgcctaaattaggagtgcaaattatcataggagagctttcagat 13710090  T
Q  117 gattcgaatgacttaaccatactc------aatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagg 210  Q
    |||| ||| | ||||||||||||       ||| |||||||| |||||||||  |||||||||||| |||||||||||||  ||||||||||| |||  |    
T  13710091 gatttgaaggtcttaaccatacttctctcaaattttctaaaa-ccaatcttttattgtttttaatccgtttatgttacaac-tcaactcaacttcctcag 13710188  T
Q  211 gcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaa 310  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| | |||||| ||||||||||||||||||| |||||||    
T  13710189 gcatcaatataaattttatacatcctttttaataatgaaattgctaagtagaagttaaatacagttctcgtaaaaacgaatttttattacttcgattgaa 13710288  T
Q  311 tttggttcacttgccaaatatccatca 337  Q
    |||||||||||||||||||||| ||||    
T  13710289 tttggttcacttgccaaatatctatca 13710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 338
Target Start/End: Original strand, 40017895 - 40018225
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaatt---aaataatcattgattgaactaggagtgcaaattaccatatgagaacttc 112  Q
    ||||||||  ||||||  |||| |||| |||||||||||||| ||| |   |||||||||||| ||||| |||||||||||||||||||| ||||  |||    
T  40017895 taggtcaaaggattggggagaagtactgagttaatctgtcgtaaaacttataaataatcattggttgaattaggagtgcaaattaccataggagagtttc 40017994  T
Q  113 ggaagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcct 207  Q
    ||| |||||||| | ||||||||||||     |||| ||    |||||| ||| |  |||||||||||| |||||||||||||| |||||||||||||||    
T  40017995 ggaggattcgaaggtcttaaccatacttctctcaatttttcttaaaccagtctcttattgtttttaatccgtttatgttacaaa-tcaactcaactgcct 40018093  T
Q  208 agggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggat 306  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| | || ||| |||||| || |||| ||  |||| || |||||||||||| |||    
T  40018094 agggcatcaatataaattttatacatcctttttaataaaaaaattgccaagtcgaagttaaatgcactccttgtgaaaacaaattttttattacttcgat 40018193  T
Q  307 tgaatttggttcacttgccaaatatccatcac 338  Q
    ||||||||||||||||||||||||| ||||||    
T  40018194 tgaatttggttcacttgccaaatattcatcac 40018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 16 - 339
Target Start/End: Complemental strand, 23673671 - 23673343
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  |||||| |||||| ||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  23673671 taggtcaagagattgggtagaattactttgttaatttgtcgttaaactagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 23673572  T
Q  116 agattcgaatgacttaaccatac-tc-----aatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaa-atcaactcaactgccta 208  Q
     |||||||| | ||||||||||| ||     ||| |||| |||||||| ||||  |||||||||||| |||||| |||||||   |||  ||||||||||    
T  23673571 ggattcgaaggtcttaaccatacatctctctaattttct-aaaaccaaacttttattgtttttaatccgtttattttacaaatgccaatccaactgccta 23673473  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt--tttattacttggat 306  Q
    |||||  |   | ||||| ||||||||||||| ||||  |||||| |  |||||| ||||  ||  ||||||| || |||||||  |||||||||| |||    
T  23673472 gggca--accttgaatttaatacatcctttttgataaagaaattgttgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgat 23673375  T
Q  307 tgaatttggttcacttgccaaatatccatcaca 339  Q
     |  ||||||||||||||||||| || ||||||    
T  23673374 ag-ttttggttcacttgccaaatctctatcaca 23673343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 36326845 - 36327171
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  |||||||| |||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  36326845 taggtcaagagattgggtagaattactttgttaatctatcgttaaattagataatcattgcttgaattaggagtgcaaattaccatatgagaacttcgga 36326944  T
Q  116 agattcgaatgacttaaccatac-tc-----aatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaa-atcaactcaactgccta 208  Q
     ||||| || | ||||||||||| ||     ||| |||| |||||||| ||||  |||||||||||| |||||| ||||||| | |||   |||| ||||    
T  36326945 ggattcaaaggtcttaaccatacatctctctaattttct-aaaaccaaacttttattgtttttaatccgtttattttacaaataccaatctaacttccta 36327043  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt--tttattacttggat 306  Q
    |||||  | | | ||||| ||||||| ||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||||  |||||||||| |||    
T  36327044 gggca--actttgaatttaatacatcttttttgataaagaaattgcagagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcgat 36327141  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
     |  |||||||||||||||||||||| ||||    
T  36327142 ag-ttttggttcacttgccaaatatctatca 36327171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 32576013 - 32575890
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    ||||||||| |||| | |||| |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| |||| |||| |||||||    
T  32576013 taggtcaagggatttggtagagttactaagttaatctgtcgtgaaactaaataatcattttttgaactaggagtgcaaattatcataggagagcttcgga 32575914  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  32575913 ggattcgaaggtcttaaccatact 32575890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 8427199 - 8427260
Alignment:
Q  71 cattgattgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaac 133  Q
    |||||||||||| ||| ||||||||||||| || ||||| ||||| |||||||||| ||||||    
T  8427199 cattgattgaac-aggggtgcaaattaccaaataagaacatcggatgattcgaatgtcttaac 8427260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 4e-91; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 16 - 337
Target Start/End: Complemental strand, 13017517 - 13017189
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||   | | ||||||||||||||||||| |||| ||| ||    
T  13017517 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgatcatatttaggagtgcaaattaccataggagagctttgg 13017418  T
Q  115 aagattcgaatgacttaaccatact-----caatcttct-aaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | |||||||| ||||||||||||||     |||| |||| ||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  13017417 aggattcgaaggacttaaccatacttctctcaattttctgaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 13017318  T
Q  209 gggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggatt 307  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||| | ||||||| |||||||| |||||||||||| |||     
T  13017317 gggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatatagtcctcgtggaaacgaactttttattacttcgatc 13017219  T
Q  308 gaatttggttcacttgccaaatatccatca 337  Q
    ||||||||||||||||||||||||| ||||    
T  13017218 gaatttggttcacttgccaaatatctatca 13017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 22221642 - 22221959
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||| | | | ||||||||||||||||| |||| ||||||    
T  22221642 taggtcaagagattgggtagaattactaagttaatccgtcgtgatactaaataatcattgattgtatttaagagtgcaaattaccataggagagcttcgg 22221741  T
Q  115 aagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
    | |||||||| ||||||||||| ||     |||| ||||||||||||||  ||  ||||||||||| |||||||  ||| ||||||||||||||||||||    
T  22221742 aggattcgaaggacttaaccatgcttctctcaattttctaaaaaccaattctttattgtttttaattagtttat--tactaaatcaactcaactgcctag 22221839  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattt-ttattacttggattg 308  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||  ||||||  |||||| | ||||||| ||||||||||| ||| ||||| ||| |    
T  22221840 ggcaccaataataattt-atacatcctttttaataatgaaattgcttagtagaagctaaatatagtcctcgtggaaacgaatttattactacttcgatag 22221938  T
Q  309 aatttggttcacttgccaaat 329  Q
      |||||| ||||||||||||    
T  22221939 cttttggtacacttgccaaat 22221959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 22247477 - 22247794
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||| | | | ||||||||||||||||| |||| ||||||    
T  22247477 taggtcaagagattgggtagaattactaagttaatccgtcgtgatactaaataatcattgattgtatttaagagtgcaaattaccataggagagcttcgg 22247576  T
Q  115 aagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
    | |||||||| ||||||||||| ||     |||| ||||||||||||||  ||  ||||||||||| |||||||  ||| ||||||||||||||||||||    
T  22247577 aggattcgaaggacttaaccatgcttctctcaattttctaaaaaccaattctttattgtttttaattagtttat--tactaaatcaactcaactgcctag 22247674  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattt-ttattacttggattg 308  Q
    ||||||||||  ||||| ||||||||||||||||||| ||||||||  ||||||  |||||| | ||||||| ||||||||||| ||| ||||| ||| |    
T  22247675 ggcaccaataataattt-atacatcctttttaataatgaaattgcttagtagaagctaaatatagtcctcgtggaaacgaatttattactacttcgatag 22247773  T
Q  309 aatttggttcacttgccaaat 329  Q
      |||||| ||||||||||||    
T  22247774 cttttggtacacttgccaaat 22247794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 30978539 - 30978322
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattg-aactaggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| | |  |||||||||||||||||||| |||| ||| ||    
T  30978539 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgatcgtatttaggagtgcaaattaccataggagagctttgg 30978440  T
Q  115 aagattcgaatgacttaaccata-----ctcaatcttc-taaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgccta 208  Q
    | |||||||| ||||||||||||     |||||| ||| |||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||    
T  30978439 aggattcgaaggacttaaccatacttctctcaattttcttaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgccta 30978340  T
Q  209 gggcaccaatataaattt 226  Q
    ||||||||||||||||||    
T  30978339 gggcaccaatataaattt 30978322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 14790537 - 14790864
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  14790537 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 14790636  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| ||||||||||||||||    
T  14790637 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 14790734  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa--tttttattacttggat 306  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||  || ||| ||||| |||    
T  14790735 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgat 14790833  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
     |  |||||| ||||||||||||||| ||||    
T  14790834 agcttttggtacacttgccaaatatctatca 14790864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 14795565 - 14795892
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  14795565 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 14795664  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| ||||||||||||||||    
T  14795665 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 14795762  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa--tttttattacttggat 306  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  |||||||||  |||||  || ||| ||||| |||    
T  14795763 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtaggtacgaactttattactacttcgat 14795861  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
     |  |||||| ||||||||||||||| ||||    
T  14795862 agcttttggtacacttgccaaatatctatca 14795892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 20527490 - 20527367
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| || | ||| |  |||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20527490 taggtcaagagattgggtaaagttaatttgttaatctgtcgtgaagttagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 20527391  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  20527390 ggattcgaaggtcttaaccatact 20527367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 15534975 - 15535177
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| |||||  |||||||||||||  || || |||||||||||||||| ||||| |||||||||||||| || |||||||||    
T  15534975 taggtcaagagattggttagagttactttgttaatctgtcgttgaactagataatcattgattgaattaggaatgcaaattaccataggaaaacttcgga 15535074  T
Q  116 agattcgaatgacttaaccatac------tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||| ||| | |||||||||||      | ||| || | |||||||| ||||  ||||||||||||  ||| | |||||||||||||||||||||||||    
T  15535075 ggatttgaaggtcttaaccatacatcactttaattttgt-aaaaccaaacttttattgtttttaatctatttgttttacaaaatcaactcaactgcctag 15535173  T
Q  210 ggca 213  Q
    ||||    
T  15535174 ggca 15535177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 16883594 - 16883795
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||  ||| |  |||||||| |||||||  || |||||||||| ||||| ||| |||||||||||||||| |||||||||| |    
T  16883594 taggtcaagagattgggtagggttattgtgttaatctttcgtgaacatagataatcattgtttgaattagtagtgcaaattaccataggagaacttcgaa 16883693  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgccta 208  Q
     |||||||||| ||||||||||||       ||| |||| |||||||||||||  |||||||||||  ||||||||||| |||||||| |||||||||||    
T  16883694 ggattcgaatgtcttaaccatacttctctctaattttct-aaaaccaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgccta 16883792  T
Q  209 ggg 211  Q
    |||    
T  16883793 ggg 16883795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 32704577 - 32704458
Alignment:
Q  20 tcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagat 119  Q
    |||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| || |||    
T  32704577 tcaagagattgggtagaattactctgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcagaggat 32704478  T
Q  120 tcgaatgacttaaccatact 139  Q
    ||||| | ||||||||||||    
T  32704477 tcgaaggtcttaaccatact 32704458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 19664991 - 19664870
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||| ||||| |||| |||||  |||||||||||||||| | | |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  19664991 taggtcaagatattgggtagagttactttgttaatctgtcgtgaact-agataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 19664893  T
Q  116 agattcgaatgacttaaccatac 138  Q
     |||||||| | |||||||||||    
T  19664892 ggattcgaaggtcttaaccatac 19664870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 1838393 - 1838515
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| |||||  |||||||||||||  || ||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||    
T  1838393 taggtcaagagattgggtagagttactttgttaatctgtcgttgaactaaataatcgttgattgaactaggagtgcgaatta-cataggagaacttcgga 1838491  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  1838492 ggattcgaaggtcttaaccatact 1838515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 7769715 - 7769594
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||| ||||||  ||||||||||  |||||| |||||| ||| ||||| | ||||||||||| |  | |||||||||||||||| ||| | |||||    
T  7769715 taggtcaaaagattgagtagaattactttgttaatatgtcgttaaactaaatgaacattgattgaattgagggtgcaaattaccatataagagcatcgga 7769616  T
Q  116 agattcgaatgacttaaccata 137  Q
     |||||||| | ||||||||||    
T  7769615 ggattcgaaggtcttaaccata 7769594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 12980818 - 12980711
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |  | ||||||||||| |||| || ||||||  |||| ||||||||||||    
T  12980818 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagacgaacattgattgaa-taggggtacaaattttcataggagaacttcgga 12980720  T
Q  116 agattcgaa 124  Q
     ||||||||    
T  12980719 ggattcgaa 12980711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 27649077 - 27649144
Alignment:
Q  72 attgattgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccatact 139  Q
    |||| ||||| ||| |||||||||||||||| |||||||||||| |||||||| | ||||||||||||    
T  27649077 attgcttgaattagaagtgcaaattaccataggagaacttcggaggattcgaaggtcttaaccatact 27649144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 12983704 - 12983598
Alignment:
Q  17 aggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaa 116  Q
    ||||||||||||||| ||||||||||  ||||||||||||| ||| || |  | ||||||||||| |||| || || |||  |||| ||||||||||||     
T  12983704 aggtcaagagattgggtagaattactttgttaatctgtcgttaaactagacgaacattgattgaa-taggggtacagattttcataggagaacttcggag 12983606  T
Q  117 gattcgaa 124  Q
    ||||||||    
T  12983605 gattcgaa 12983598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 11184028 - 11183962
Alignment:
Q  145 ttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctaggg 211  Q
    ||||||||||||| ||||  ||||||||| |  ||||||||||||||| |||||||||||||||||||    
T  11184028 ttctaaaaaccaa-cttttattgtttttattacgtttatgttacaaaaatcaactcaactgcctaggg 11183962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 15540643 - 15540689
Alignment:
Q  165 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctaggg 211  Q
    ||||||||||||  ||||| ||| |||||||||||||||||||||||    
T  15540643 ttgtttttaatccctttattttagaaaatcaactcaactgcctaggg 15540689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 32427281 - 32427325
Alignment:
Q  77 ttgaactaggagtgcaaattaccatatgagaacttcggaagattc 121  Q
    ||||| |||||||||||||||||||| ||||||||| || |||||    
T  32427281 ttgaattaggagtgcaaattaccataggagaacttcagaggattc 32427325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 163; Significance: 7e-87; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 9781 - 10101
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| | | ||||||||||||| ||||| |||| ||||||    
T  9781 taggtcaagagattgggtagaattactaagttaatccgtcgtgaaactaaataatcattgattgtatttaggagtgcaaattgccataggagagcttcgg 9880  T
Q  115 aagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
    | |||||||| ||||||||||||||     |||| ||||||||||||||  ||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  9881 aggattcgaaggacttaaccatacttctctcaattttctaaaaaccaattatttattgtttttaatcagtttatgttactaaatcaactcaactgcctag 9980  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaat--ttttattacttggatt 307  Q
    || ||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||| |||  |  |||||||||  ||||||||||| |||     
T  9981 gggaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaagttaaatacagtccctgaggaaacgaattcttttattacttcgatc 10079  T
Q  308 gaatttggttcacttgccaaat 329  Q
    ||||||| ||||||||||||||    
T  10080 gaatttgattcacttgccaaat 10101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 329
Target Start/End: Complemental strand, 24510 - 24193
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaact-aggagtgcaaattaccatatgagaacttcgg 114  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| | |||||||||||| |||| | | ||||||||||||||||||| |||| ||||||    
T  24510 taggtcaagagattgggtagaattactaagttaatccgtcgtgatactaaataatcatttattgtatttaggagtgcaaattaccataggagagcttcgg 24411  T
Q  115 aagattcgaatgacttaaccatact-----caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
    | |||||||| ||||||||||| ||     |||| ||||||||||||||  ||  |||||||||||||||||||  ||| ||||||||||||||||||||    
T  24410 aggattcgaaggacttaaccatgcttctctcaattttctaaaaaccaattctttattgtttttaatcagtttat--tactaaatcaactcaactgcctag 24313  T
Q  210 ggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattt-ttattacttggattg 308  Q
    ||||||||||  ||||| ||||||||||||||||||| |||||| |  |||||| ||||||||| ||||||| ||||| ||||| ||| ||||| ||| |    
T  24312 ggcaccaataataattt-atacatcctttttaataatgaaattgttgagtagaagttaaatacagtcctcgtggaaacaaatttattactacttcgatag 24214  T
Q  309 aatttggttcacttgccaaat 329  Q
      |||||| ||||||||||||    
T  24213 cttttggtacacttgccaaat 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 22 - 331
Target Start/End: Complemental strand, 12575620 - 12575306
Alignment:
Q  22 aagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagattc 121  Q
    |||||||| | ||||||||||  ||||||||||||| ||| || || ||||||| ||||| |||||||||||||||||||| || ||||||||| |||||    
T  12575620 aagagattaggtagaattactttgttaatctgtcgttaaactagattatcattgcttgaattaggagtgcaaattaccataagaaaacttcggaggattc 12575521  T
Q  122 gaatgacttaaccatactc------aatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcac 214  Q
     |  | ||||||||||||       ||| |||||||| |||||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  12575520 aatggtcttaaccatacttctctctaattttctaaaa-ccaatcttttattgtttttaatcaatttatgttacaaaaatcaactcaactgcctagggcac 12575422  T
Q  215 caatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggattgaattt 313  Q
    || |   ||||| ||||||||||||||||||| || ||| |  |||||| ||||  ||| ||||||| || ||||||| |||||||||| ||||||||||    
T  12575421 cattg--aatttaatacatcctttttaataatgaacttgttgagtagaagttaacaacagtcctcgtggatacgaattatttattacttcgattgaattt 12575324  T
Q  314 ggttcacttgccaaatat 331  Q
    ||| ||||||||||||||    
T  12575323 ggtacacttgccaaatat 12575306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 41779068 - 41778864
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| ||| |  ||||||||||||||||  || |||||||||| ||||| ||  ||||||||||| |||| ||||||||||||    
T  41779068 taggtcaagagattgggtagagttattgtgttaatctgtcgtgaacctagataatcattgtttgaattactagtgcaaattagcataggagaacttcgga 41778969  T
Q  116 agattcgaatgacttaaccatac------tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgccta 208  Q
    ||||| ||| | |||||||||||      | ||||||||  ||| ||||||||  |||||||||||  ||||||||||| |||||||| |||||||||||    
T  41778968 agatttgaaggtcttaaccatacttctctttaatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgccta 41778871  T
Q  209 gggcacc 215  Q
    |||||||    
T  41778870 gggcacc 41778864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 14418445 - 14418585
Alignment:
Q  77 ttgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgttt 170  Q
    ||||| ||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||       ||| |||| |||||||| ||||  ||||||    
T  14418445 ttgaattaggagtgcaaattatcataggagaaattcggaggattcgaatgtcttaaccatacttctctctaatattcttaaaaccaa-cttttattgttt 14418543  T
Q  171 ttaatcagtttatgttacaaaatcaactcaactgcctagggca 213  Q
    |||||  |||||||||| |||| ||||||||||||||||||||    
T  14418544 ttaatttgtttatgtta-aaaaccaactcaactgcctagggca 14418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 13096940 - 13097062
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||| ||||||||||| ||||||||||  |||||||| || |  || || |||||||||| || || ||||||||||||||| |||| || |||||||||    
T  13096940 taggccaagagattgggtagaattactttgttaatctttcattgaactagataatcattgcttaaattaggagtgcaaatta-cataggataacttcgga 13097038  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  13097039 ggattcgaaggtcttaaccatact 13097062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 44008245 - 44008335
Alignment:
Q  47 taatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccata 137  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||| ||||||| | | || ||||||| |||||||| | | ||||||||    
T  44008245 taatctatcgtgaaactaaataatcattgtttgaactaggagtgcagattaccaaaggcgagcttcggaggattcgaaggtcataaccata 44008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 41836479 - 41836429
Alignment:
Q  86 gagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccat 136  Q
    ||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  41836479 gagtgcaaattaccataggagaacttcggaggattcgaaggtcttaaccat 41836429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 34066264 - 34066468
Alignment:
Q  17 aggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaa 116  Q
    ||||||||||||||| ||||||||||  |||||||| |||| ||| || |||||||||||||||| ||||||||||||||| |||| ||||||||||||     
T  34066264 aggtcaagagattgggtagaattactttgttaatctatcgttaaactagataatcattgattgaattaggagtgcaaattatcataggagaacttcggag 34066363  T
Q  117 gattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgcctag 209  Q
    |||||||| | ||||||||||||       ||| |||| |||||||||||||  |||||||||||  ||||||||||| |||||||| ||||||||||||    
T  34066364 gattcgaaggtcttaaccatacttctctctaattttct-aaaaccaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctag 34066462  T
Q  210 ggcacc 215  Q
    ||||||    
T  34066463 ggcacc 34066468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 13493181 - 13493508
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||| ||    
T  13493181 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcaga 13493280  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| ||||||||||||||||    
T  13493281 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 13493378  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa--tttttattacttggat 306  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||  || ||| ||||| |||    
T  13493379 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgat 13493477  T
Q  307 tgaatttggttcacttgccaaatatccatca 337  Q
     |  |||||| ||||||||||||||| ||||    
T  13493478 agcttttggtacacttgccaaatatctatca 13493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 339
Target Start/End: Original strand, 10764838 - 10765167
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| ||||||||||| |||||||| ||||||||| ||    
T  10764838 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaagttaccataggagaacttcaga 10764937  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     |||||||| | ||||||||||||       ||| |||| |||||||| ||||  |||||||   |  ||||||||||||||| ||||||||||||||||    
T  10764938 ggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaa-cttttattgttttatttacgtttatgttacaaaa-caactcaactgcctag 10765035  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa--tttttattacttggat 306  Q
    ||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||  || ||| ||||| |||    
T  10765036 ggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgat 10765134  T
Q  307 tgaatttggttcacttgccaaatatccatcaca 339  Q
     |  |||||| ||||||||||||||| ||||||    
T  10765135 agcttttggtacacttgccaaatatctatcaca 10765167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 39546161 - 39546284
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  39546161 taggtcaagagattgggtagagttactttgttaatctgtcgtgaaactagataatcattgcttgaattaggagtgcaaattaccatatgagaacttcgga 39546260  T
Q  116 agattcgaatgacttaaccatact 139  Q
     |||||||| | ||||||||||||    
T  39546261 ggattcgaaggtcttaaccatact 39546284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 332
Target Start/End: Original strand, 1936549 - 1936869
Alignment:
Q  20 tcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagat 119  Q
    |||||||||| | |||| |||||  |||||||| |||||||  || ||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  1936549 tcaagagatttggtagagttactttgttaatctttcgtgaagctagataatcattgattgaactaggagtgcaaattaccataggagaacttcggaggat 1936648  T
Q  120 tcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaa-tcagtttatgttacaa-aatcaactcaactgcctaggg 211  Q
    ||||| | ||||||||||||       ||| |||| ||||||||  |||    |||||||| |||||||||| ||||| ||||||||||||||||||||     
T  1936649 tcgaaggtcttaaccatacttctctctaattttct-aaaaccaaaattttaccgtttttaattcagtttatgatacaacaatcaactcaactgcctaggt 1936747  T
Q  212 c-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggattga 309  Q
    | ||| || | ||||| ||||||| || ||| |||| ||||||| | |||||| ||||  |   || | || |||| ||||| || ||||||| ||||||    
T  1936748 caacccat-tgaatttaatacatcgttattactaatgaaattgccaagtagaagttaacaatggtcattgtggaaatgaattattcattacttcgattga 1936846  T
Q  310 atttggttcacttgccaaatatc 332  Q
    |||||||||||||||||||||||    
T  1936847 atttggttcacttgccaaatatc 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 13495906 - 13496224
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    ||||||||||||||||||| |||||||   |||||||||||| ||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  13495906 taggtcaagagattggatataattactttcttaatctgtcgttaaagtagataatcattgattgaattaggagtgcaaattaccataggagaacttcgga 13496005  T
Q  116 agattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctag 209  Q
     ||||| || | ||||||||||||       ||| |||| |||| ||| ||||  |||||||   |  ||||||||||||||| ||| ||||||||||||    
T  13496006 ggattcaaaggtcttaaccatacttctctctaatattcttaaaatcaa-cttttattgttttatttacgtttatgttacaaaa-caattcaactgcctag 13496103  T
Q  210 ggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt--tttattacttggat 306  Q
    | | | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||||||| || |||||||  |||||||||| |||    
T  13496104 gacaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgat 13496202  T
Q  307 tgaatttggttcacttgccaaat 329  Q
     |  ||||||||||||| |||||    
T  13496203 ag-ttttggttcacttgtcaaat 13496224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 32506181 - 32506062
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || |||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  32506181 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcgga 32506082  T
Q  116 agattcgaatgacttaacca 135  Q
     |||||||| | ||||||||    
T  32506081 ggattcgaaggtcttaacca 32506062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 27282434 - 27282311
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||| |||||  || || |||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  27282434 taggtcaagagattgggtagaattactttgttaatcggtcgttgaactagataatcattgcttgaattaggagtgcaaattaccataggagaacttcgga 27282335  T
Q  116 agattcgaatgacttaaccatact 139  Q
      ||||||| | ||||||||||||    
T  27282334 gaattcgaaagtcttaaccatact 27282311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 16190475 - 16190299
Alignment:
Q  45 gttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccatac------ 138  Q
    |||||| |||||| ||| || |||||||||| ||||| || |||||||||||| |||| |||||||||||| |||||||| | |||||||||||          
T  16190475 gttaatttgtcgttaaactagataatcattgcttgaattaagagtgcaaattatcataggagaacttcggaggattcgaaggtcttaaccatacttctct 16190376  T
Q  139 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaa-atcaactcaactgcctagggcacca 216  Q
    | ||| |||| |||||||||||||  |||||||||||  |||||||||||||| |||||||||| | ||||||||||||    
T  16190375 ttaattttct-aaaaccaatcttt-attgtttttaattcgtttatgttacaaacatcaactcaatttcctagggcacca 16190299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 21153174 - 21153295
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||  ||||||||||  ||||||||||||| ||| ||||| | ||||||||||| | || |||||||||||||| | ||| | |||||    
T  21153174 taggtcaagagattgagtagaattactgtgttaatctgtcgttaaactaaatgaacattgattgaattgggggtgcaaattaccatttaagagcatcgga 21153273  T
Q  116 agattcgaatgacttaaccata 137  Q
     |||||||| | ||||||||||    
T  21153274 ggattcgaaggtcttaaccata 21153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 22456818 - 22456711
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  |||| |||||||| ||| || |  | ||||||||||| |||| || |||||| ||||| ||||||||||||    
T  22456818 taggtcaagagattgggtagaattactttgttagtctgtcgttaaactagacgaacattgattgaa-taggggtacaaatttccataggagaacttcgga 22456720  T
Q  116 agattcgaa 124  Q
     ||||||||    
T  22456719 ggattcgaa 22456711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 49147825 - 49147924
Alignment:
Q  24 gagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagattcga 123  Q
    |||||||| ||||||||||  ||||||||||||| ||| || |  | ||||||||||| |||| || |||||| ||||| |||||||||||| |||||||    
T  49147825 gagattgggtagaattactttgttaatctgtcgttaaactagacgaacattgattgaa-taggggtacaaatttccataggagaacttcggaggattcga 49147923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 8435289 - 8435358
Alignment:
Q  145 ttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcac 214  Q
    ||||||||||||| ||||  ||||||||| |  ||||||||||||||| ||||||||||||||||||||||    
T  8435289 ttctaaaaaccaa-cttttattgtttttattatgtttatgttacaaaaatcaactcaactgcctagggcac 8435358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 15297251 - 15297371
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| || || |  |||||||||| | || |||||||||||| |   ||||| |||||    
T  15297251 taggtcaagagattgggtagaattactttgttaatctgtcgttaaactagatgaatattgattgaa-ttggggtgcaaattaccgtggaagaacatcgga 15297349  T
Q  116 agattcgaatgacttaaccata 137  Q
     |||||||| | ||||| ||||    
T  15297350 ggattcgaaggtcttaatcata 15297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 18125078 - 18125145
Alignment:
Q  342 aatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagcta 409  Q
    |||||||||| ||||||||| |||||| ||||||||||| |||  || |||||| |||||||| ||||    
T  18125078 aatatattctcttgcaatatcctctagtttttcacttccgttccggggttgaactaatccaagggcta 18125145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 22453462 - 22453421
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgt 57  Q
    |||||||||||||||| ||||||||||  |||||||||||||    
T  22453462 taggtcaagagattgggtagaattactttgttaatctgtcgt 22453421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 23990322 - 23990262
Alignment:
Q  150 aaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgcctag 209  Q
    |||||| ||||||  |||||||||||| || |||||||| ||||| |||||||||||||||    
T  23990322 aaaacctatcttttattgtttttaatccgtatatgttacaaaaattaactcaactgcctag 23990262  T

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Target: scaffold0063 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 7316 - 7199
Alignment:
Q  19 gtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaaga 118  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||   || || ||    
T  7316 gtcaagagattgaatagaattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtacaaattaccataggagagtatcagagga 7217  T
Q  119 ttcgaatgacttaaccat 136  Q
    |||||| |||||||||||    
T  7216 ttcgaaggacttaaccat 7199  T

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Target: scaffold0352 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 2930 - 2807
Alignment:
Q  16 taggtcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcgga 115  Q
    |||||||||||||| | |||||||||||  ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  2930 taggtcaagagatttggtagaattactaccttaatctttcgtgaaactatataatcattgattgaactaggagtgcaaattaccataggagagcttcgga 2831  T
Q  116 agattcgaatgacttaaccatact 139  Q
     ||||| || | |||||| |||||    
T  2830 ggattcaaaggtcttaacgatact 2807  T

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Target: scaffold0500 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 2610 - 2732
Alignment:
Q  16 taggtcaagagattggatagaat--tactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcg 113  Q
    |||||||||||||||  ||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||   ||     
T  2610 taggtcaagagattgagtagaatattactaagttaatctgtcgtgaaactaaataatcattgattgaattaggagtgcaagttaccataggagagtatca 2709  T
Q  114 gaagattcgaatgacttaaccat 136  Q
    || |||||||| |||||||||||    
T  2710 gaggattcgaaggacttaaccat 2732  T

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Target: scaffold0567 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 6133 - 6014
Alignment:
Q  20 tcaagagattggatagaattactaagttaatctgtcgtgaaattaaataatcattgattgaactaggagtgcaaattaccatatgagaacttcggaagat 119  Q
    |||||||||||| |||| ||| |  ||||||||||||||||  || |||||||||| ||||| ||| |||||||||||||||| |||||| ||||| |||    
T  6133 tcaagagattgggtagagttattgtgttaatctgtcgtgaacctagataatcattgtttgaattagtagtgcaaattaccataggagaacctcggaggat 6034  T
Q  120 tcgaatgacttaaccatact 139  Q
    ||||| | ||||||||||||    
T  6033 tcgaaggtcttaaccatact 6014  T

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Target: scaffold0363 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 273 - 133
Alignment:
Q  77 ttgaactaggagtgcaaattaccatatgagaacttcggaagattcgaatgacttaaccatact------caatcttctaaaaaccaatctttctttgttt 170  Q
    ||||| ||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||       ||| |||| |||||||| ||||  ||||||    
T  273 ttgaattaggagtgcaaattatcataggagaaattcggaggattcgaatgtcttaaccatacttctctctaatattcttaaaaccaa-cttttattgttt 175  T
Q  171 ttaatcagtttatgttacaaaatcaactcaactgcctagggca 213  Q
    |||||  |||||||||| |||| ||||||||||||||||||||    
T  174 ttaatttgtttatgtta-aaaaccaactcaactgcctagggca 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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