View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19964_high_11 (Length: 389)
Name: NF19964_high_11
Description: NF19964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19964_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 31919159 - 31919536
Alignment:
| Q |
1 |
atattcaatttagctccgttgttgagttaagggacgttgaaggatctggaacttctaacattgttaacatttgtctataagctaaaggggacataaatta |
100 |
Q |
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| T |
31919159 |
atattcaatttagctccgttgttgagttaagggacattgaaggatctggaacttctaacattgttaacatttgtctataagctaaaggggacataaatta |
31919258 |
T |
|
| Q |
101 |
tgcgaacataaacatagacattttgtaaattgattgtctttcctagcactacatctttcatttagtatctgtagaagtaattttacaatctcatttcatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31919259 |
tgcgaacataaacatagacattttgtaaattgattgtctttcctagcactacatctttcatttagtatctgtagaagtaattttacaatctcatttcatg |
31919358 |
T |
|
| Q |
201 |
aaagtttcttagttgaacattatctattggtatattttattcatgcagacaaagagttgacaaccatgctgacctcaatgattttcagacatgtaacaaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31919359 |
aaagtttcttagttgaacattatctattggtatattttattcatgcagacaaagagttgacaaccatgctgacctcaatgattttcagacatgtaacaaa |
31919458 |
T |
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| Q |
301 |
tacaacattgacaacactgggcttgtctgtaagtttctttgccatctcacaactcataactgcatctaagattttcat |
378 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31919459 |
tacaacattgacaacactgggcttgtctgtaagtttctttaccatctcacaactcataactgcatctaagattttcat |
31919536 |
T |
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