View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19964_high_17 (Length: 349)
Name: NF19964_high_17
Description: NF19964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19964_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 25588529 - 25588828
Alignment:
| Q |
1 |
aaacaattatttgttgaattttatccaagaatagtaactactttgacattaggctacacattgccaaacacatttctatttcaatccctaagtacgattt |
100 |
Q |
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|||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
25588529 |
aaacaattctttgttgaatattatccaagaatagtaactactttgacattaggctacacattgccaaacacatttctatttcaacccctaagtacgattt |
25588628 |
T |
|
| Q |
101 |
tgagattctaagttttctgttgagaacatacataattgcaatccttgtgagaattccacattttcataaatttgaaagaggaggcaaatatagtatcact |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25588629 |
tgagattctaagttttctgttgagaacatacataaatgcaatccttgtgagaattccacattttcataaatttgaaagaggaggcaaatatagtatcact |
25588728 |
T |
|
| Q |
201 |
catagaccaatcccatcctaatggggtaacaatgaaaataaaccttagtgagggtaatgtaagtggaagaatctcaagtgtgtctatcaattcttttctc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |
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| T |
25588729 |
catagaccaatcccatcctaatggggtaacaatgaaaataaaccttagtgagggtaatgtaagtgtaagaatctcaa--gtgtctatcaattcttttctc |
25588826 |
T |
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