View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19964_high_26 (Length: 265)
Name: NF19964_high_26
Description: NF19964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19964_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 19113801 - 19113957
Alignment:
| Q |
1 |
aaatggacaataaatataagtgtattatgcaaataatatctttttcaatcctttgtccttctcgagcgcctttcaaattttcaattttcctcttattaaa |
100 |
Q |
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||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
19113801 |
aaatggacaatgaataaaagtgtattatgcaaattatatctttttcaattctttgtccttctcgagcgccttttaaattttcaattttcctcttattaaa |
19113900 |
T |
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| Q |
101 |
attttgtaatctgaactagatttacacatagaccatacctatttgtgacagtgaaca |
157 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
19113901 |
attttgtaatctgaactagatttacacatagaccatacctatttgttacagtgaaca |
19113957 |
T |
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