View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19964_low_3 (Length: 598)
Name: NF19964_low_3
Description: NF19964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19964_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 428 - 580
Target Start/End: Complemental strand, 2418041 - 2417882
Alignment:
| Q |
428 |
tatttgtagaggtgttagtttaaaagttatcataaatctgcactcaacaaggttacatgtctgggcttggttcc--------ttgctccnnnnnnnnttg |
519 |
Q |
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| T |
2418041 |
tatttgtagaggtgttagtttaagcgttatcataaatctgcactcaacaaggttacatgtct-ggcttggttccttgtagagttgctccaaaaaaatttg |
2417943 |
T |
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| Q |
520 |
cctaatgctgaaaattaatctgagaaattggctcaaagcattgattcttgaatggtagtga |
580 |
Q |
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| T |
2417942 |
cctaatgctaaaaattaatctgagaaattggctcaaagcattgattcttgaatggtagtga |
2417882 |
T |
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