View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19965_low_28 (Length: 284)
Name: NF19965_low_28
Description: NF19965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19965_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 2646003 - 2645753
Alignment:
| Q |
18 |
caagttatggaacggtgggttttgaaacttaaaatgaaactctatccttttcttgctgaatttaagacggtgtgatgagaaagattttagaaaaatacaa |
117 |
Q |
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| T |
2646003 |
caagttatgggacggtgggttttgaaacttaaaatgaaactctatccttttcttgctgaatttaagacggtgtgatgagaaagattttagaaaaatacaa |
2645904 |
T |
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| Q |
118 |
ataatacaataaagtattacaatcaaattttatgtgatatcaccaatacgtatacgttacttaatttgttcatttttccaatatcacactaaaatcatac |
217 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
2645903 |
ataatacaataaagtaagacaatcaaattttatgtgatatcaccaatacgtatacgttacttaatttgttcatttttcctatatcacactaaaatcatac |
2645804 |
T |
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| Q |
218 |
atgtgctagcctcacaataaacacacacatatacacattttttccttggtacc |
270 |
Q |
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| T |
2645803 |
atgtgctagcctcacaataaaca--cacatatacacattttttccttggtacc |
2645753 |
T |
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