View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19968_high_5 (Length: 250)
Name: NF19968_high_5
Description: NF19968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19968_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 51526806 - 51527040
Alignment:
| Q |
8 |
aagcaaagggacacgggttactgttaaccccaattaattagcacttgattattggatgttttcagttcacattcaaaagagccaactctgtgcaacaaga |
107 |
Q |
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| T |
51526806 |
aagcaaaaggacacgggttactgttaaccccagttaattagcacttgattattggatgttttcagttcacattcaaaagagccaactctgtgcaacaaga |
51526905 |
T |
|
| Q |
108 |
gggacacattcacattcaagtttattctaagtacttggcaaaaatttgagcatgatcttcaacatacttctgtatatgcatatgcgtgtgtgtgaatttt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
51526906 |
gggacacattcacattcaagtttattctaagtacttggcaaaaatttgagcatgatcttcaacatacttctgt------atatgcgtgtgtgtgaatttt |
51526999 |
T |
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| Q |
208 |
aaaatgaataatgctgaatctagcgagagaaatgatgattc |
248 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| |
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| T |
51527000 |
aaaatgaataatgctgaatctagcaagagaaatgatgattc |
51527040 |
T |
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