View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19969_high_10 (Length: 327)
Name: NF19969_high_10
Description: NF19969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19969_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 182435 - 182161
Alignment:
| Q |
17 |
agatttatatataggagtgaaagagttttttctttcttcttctacctatatggaaagtaagtgtggttaatgttaatatttatggtcaaaaaccaagttg |
116 |
Q |
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| T |
182435 |
agatttatatataggagtgaaagagttgtttctttcttcttctacctatatggaaagtaagtgtggttaatgttaatatttatggtcaaaaaccaagttg |
182336 |
T |
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| Q |
117 |
catattatattaataataataaatttaaaattgtgcttctgcacacagaatgagaatgacagaattgaagagtgtgttgtttgttagttagttgtaatat |
216 |
Q |
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| T |
182335 |
catatta--------ataataaatttaaaattgtgcttctgcacacagaatgaggatgacagaattgaagagtgtgttgtttgttagttagttgtaatat |
182244 |
T |
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| Q |
217 |
tcaattaatcacgtaccattaaatcattgttctcgacatcaatcata-tttgtacacttcatatttttcaatattcaatcaac |
298 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
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| T |
182243 |
tcaattaatcacgtaccattaaatcattgttgtcgacatcaatgatattttgtacacttcatatttttcaatattcaatcaac |
182161 |
T |
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