View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19969_high_2 (Length: 447)
Name: NF19969_high_2
Description: NF19969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19969_high_2 |
 | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0642 (2 HSPs) |
| | |
|
| [»] scaffold0345 (2 HSPs) |
| | |
|
| [»] scaffold0105 (2 HSPs) |
| | |
|
| [»] scaffold1526 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0016 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 91 - 434
Target Start/End: Complemental strand, 50993 - 50650
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
50993 |
aaaaaagatctgaaatgcatccaccgcaaagattcctaaaatgccatggatcatgattgaagattcaaagtaatcaaggagcattatttggtaatattag |
50894 |
T |
|
| Q |
191 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
290 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50893 |
ttatgtcgacatctctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
50794 |
T |
|
| Q |
291 |
gtgaattatgtaagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
390 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50793 |
gtgaattatgtaagggctgggttaactattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
50694 |
T |
|
| Q |
391 |
gaatcttggatttgatattactttagagtaaaccatgtgaatct |
434 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
50693 |
gaatcttggatttaatattactttagagtaaaccatgtgaatct |
50650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 91 - 434
Target Start/End: Original strand, 44498575 - 44498918
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
44498575 |
aaaaaagatctgaaatgcatccaccgcaaagattcctaaaatgccatggatcatgattgaagattcaaagtaatcaaggagcattatttggtaatattag |
44498674 |
T |
|
| Q |
191 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
290 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44498675 |
ttatgtcgacatctctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
44498774 |
T |
|
| Q |
291 |
gtgaattatgtaagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
390 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44498775 |
gtgaattatgtaagggctgggttaactattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
44498874 |
T |
|
| Q |
391 |
gaatcttggatttgatattactttagagtaaaccatgtgaatct |
434 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44498875 |
gaatcttggatttaatattactttagagtaaaccatgtgaatct |
44498918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44495700 - 44495791
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccatctcttcaccctaa |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
44495700 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccacctcttcaccctaa |
44495791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0642 (Bit Score: 287; Significance: 1e-161; HSPs: 2)
Name: scaffold0642
Description:
Target: scaffold0642; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 91 - 437
Target Start/End: Original strand, 6958 - 7291
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
190 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6958 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattatttggtaatattag |
7057 |
T |
|
| Q |
191 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
290 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7058 |
ttatgccgacatctctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
7157 |
T |
|
| Q |
291 |
gtgaattatgtaagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
390 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7158 |
gtgaattatgtaagggctgggttaactattttggatacaaatttgtatttgcaccttttgctgg-------------aagtatgttttgtttttaagctt |
7244 |
T |
|
| Q |
391 |
gaatcttggatttgatattactttagagtaaaccatgtgaatctgtg |
437 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7245 |
gaatcttggatttgatattactttagtgtaaaccatgtgaatctgtg |
7291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0642; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4298 - 4389
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccatctcttcaccctaa |
92 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4298 |
ggccaccctcctccgccgtcgttgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccacctcttcaccctaa |
4389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345 (Bit Score: 287; Significance: 1e-161; HSPs: 2)
Name: scaffold0345
Description:
Target: scaffold0345; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 91 - 437
Target Start/End: Original strand, 16871 - 17204
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
190 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16871 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattatttggtaatattag |
16970 |
T |
|
| Q |
191 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
290 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16971 |
ttatgccgacatctctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
17070 |
T |
|
| Q |
291 |
gtgaattatgtaagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
390 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17071 |
gtgaattatgtaagggctgggttaactattttggatacaaatttgtatttgcaccttttgctgg-------------aagtatgttttgtttttaagctt |
17157 |
T |
|
| Q |
391 |
gaatcttggatttgatattactttagagtaaaccatgtgaatctgtg |
437 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17158 |
gaatcttggatttgatattactttagtgtaaaccatgtgaatctgtg |
17204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14210 - 14301
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccatctcttcaccctaa |
92 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14210 |
ggccaccctcctccgccgtcgttgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccacctcttcaccctaa |
14301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105 (Bit Score: 287; Significance: 1e-161; HSPs: 2)
Name: scaffold0105
Description:
Target: scaffold0105; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 91 - 437
Target Start/End: Complemental strand, 22111 - 21778
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
190 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22111 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattatttggtaatattag |
22012 |
T |
|
| Q |
191 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
290 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22011 |
ttatgccgacatctctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
21912 |
T |
|
| Q |
291 |
gtgaattatgtaagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
390 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21911 |
gtgaattatgtaagggctgggttaactattttggatacaaatttgtatttgcaccttttgctgg-------------aagtatgttttgtttttaagctt |
21825 |
T |
|
| Q |
391 |
gaatcttggatttgatattactttagagtaaaccatgtgaatctgtg |
437 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21824 |
gaatcttggatttgatattactttagtgtaaaccatgtgaatctgtg |
21778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24771 - 24680
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccatctcttcaccctaa |
92 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24771 |
ggccaccctcctccgccgtcgttgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccacctcttcaccctaa |
24680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 91 - 437
Target Start/End: Original strand, 3381177 - 3381510
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
190 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3381177 |
aaaaaagatctgaaatgcatccacctc---gagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatattag |
3381273 |
T |
|
| Q |
191 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgt |
290 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3381274 |
ttatgccgacatgtctttagtgaaaccattttggctatctaattgtttgttg----------agttaaaattttccatttatggagttgtcatattttgt |
3381363 |
T |
|
| Q |
291 |
gtgaattatgtaagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagctt |
390 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3381364 |
atgaaatatgtaagggctgggttaactattttagatacaaatttgtatttgcaccttttgctggattggctttaactaagtatgttttgtttttaagctt |
3381463 |
T |
|
| Q |
391 |
gaatcttggatttgatattactttagagtaaaccatgtgaatctgtg |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3381464 |
gaatcttggatttgatattactttagagtaaaccatgtgaatctgtg |
3381510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3378428 - 3378519
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccatctcttcaccctaa |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3378428 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccacctcttcaccctaa |
3378519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 106; Significance: 7e-53; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 201 - 366
Target Start/End: Complemental strand, 30112048 - 30111884
Alignment:
| Q |
201 |
atgtctttagtgaaaccattttggctatctaattgtttgttgtccctttcttagttaaaattttccatttatggagttgtcatattttgtgtgaattatg |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||| |||||||||||||||| | |||||||||||||||||||| ||| |
|
|
| T |
30112048 |
atgtctttagtgaaatcattttggctatctaatgttttgttcaccctttcgtagttgaaattttccatttatg-atttgtcatattttgtgtgaataatg |
30111950 |
T |
|
| Q |
301 |
taagggctgggttaacaattttggatacaaatttgtatttgcaccttttgctggattggctttaat |
366 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
30111949 |
taagggctgagttaactattttggatacaaatttgtatttgtaacttttgctggattggctttaat |
30111884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 30110775 - 30110718
Alignment:
| Q |
376 |
tttgtttttaagcttgaatcttggatttgatatt-actttagagtaaaccatgtgaat |
432 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30110775 |
tttgtttttaagcttatatcttggatttgatattcactttagagtaaaccatgtgaat |
30110718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 30112131 - 30112059
Alignment:
| Q |
91 |
aaaaaagatctgaaatgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaa |
163 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| |||||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
30112131 |
aaaaaagatctaaaatgcatccactccaaagagttctaaaatgtcatgcatcaagattgaagattcaaagtaa |
30112059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1526 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold1526
Description:
Target: scaffold1526; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1103 - 1012
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccatctcttcaccctaa |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1103 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttcccacctcttcaccctaa |
1012 |
T |
|
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Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15707554 - 15707615
Alignment:
| Q |
1 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatgg |
62 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15707554 |
ggccaccctcctccgccgtcgtcgcaatcctttcaacctctttagtacgagtctttccatgg |
15707615 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 9200166 - 9200091
Alignment:
| Q |
319 |
ttttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagcttgaatct |
396 |
Q |
| |
|
|||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9200166 |
ttttggatccaaatttgtatt-gcaacttttt-tggattggctttagttaagtatgttttgtttttaagcttgaatct |
9200091 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 9201928 - 9201854
Alignment:
| Q |
319 |
ttttggatacaaatttgtatttgcaccttttgctggattggctttaattaagtatgttttgtttttaagcttgaatct |
396 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
9201928 |
ttttggatccaaatttgtatt-gcaattttt--tggattggctttagttaagtaggttttgtttttaagcttgaatct |
9201854 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 2303461 - 2303543
Alignment:
| Q |
105 |
atgcatccaccgcaaagagtcctaaaatgccatggatcgtgattgaagattcaaagtaatcaaggagcattgtttggtaatat |
187 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||| ||||||||||||||||| || | ||||||| ||||| ||||| |
|
|
| T |
2303461 |
atgcatccactactaagagtcctaaaatgccatttatcaagattgaagattcaaagtgattatggagcatgatttggcaatat |
2303543 |
T |
|
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Target: chr5 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 36933017 - 36932949
Alignment:
| Q |
10 |
cctccgccgtcgtcgcaatcctttcaacctccttagtacgagtctttccatggcatttccaatttccca |
78 |
Q |
| |
|
||||||||||||| |||||| || ||||||| |||||| |||||||||||||||| |||| ||||| |
|
|
| T |
36933017 |
cctccgccgtcgttccaatccctttcacctcctctgtacgactctttccatggcattttcaatctccca |
36932949 |
T |
|
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