View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19971_high_53 (Length: 229)
Name: NF19971_high_53
Description: NF19971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19971_high_53 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 44891319 - 44891112
Alignment:
| Q |
5 |
tcttaatgatggatgtagtgaagaacattggaagaaaacgaatatagataagagaagaaagactgaatatagtctaccaagtgagtccacgaagcaaatt |
104 |
Q |
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| T |
44891319 |
tcttaatgatggatgtattgaagaacattggaagaaaacgaatatagataagagaagaaagactgaatatagtctaccaagtgagtccacgaagcaagtt |
44891220 |
T |
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| Q |
105 |
ggtgctgaacaatactagttagtcctacatcgtgtagtcaagagagtgagtaaatggatgtatgatataaaagtggaagtgagtaccacatataattcat |
204 |
Q |
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| T |
44891219 |
ggtgctgaacaatactagttagtcctacatcgtgtagtcaagagagtgagtaaatggatgtatgatataaaagtagaagtgagtaccacatataattcat |
44891120 |
T |
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| Q |
205 |
acctttct |
212 |
Q |
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|||||||| |
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| T |
44891119 |
acctttct |
44891112 |
T |
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