View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19971_high_62 (Length: 203)

Name: NF19971_high_62
Description: NF19971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19971_high_62
NF19971_high_62
[»] chr8 (38 HSPs)
chr8 (121-202)||(43643363-43643444)
chr8 (121-203)||(4132454-4132536)
chr8 (121-203)||(37970287-37970369)
chr8 (121-203)||(41362762-41362844)
chr8 (140-203)||(35459498-35459561)
chr8 (121-203)||(5299714-5299796)
chr8 (121-203)||(16446643-16446725)
chr8 (125-203)||(35859274-35859352)
chr8 (122-203)||(34951826-34951907)
chr8 (116-203)||(1149395-1149482)
chr8 (121-203)||(10554972-10555055)
chr8 (121-203)||(7890725-7890807)
chr8 (125-203)||(12587922-12588000)
chr8 (118-203)||(1953753-1953838)
chr8 (131-203)||(8803594-8803666)
chr8 (120-203)||(23854199-23854281)
chr8 (116-203)||(33198142-33198229)
chr8 (121-200)||(33906553-33906632)
chr8 (111-201)||(1205269-1205359)
chr8 (121-199)||(31933654-31933732)
chr8 (121-203)||(34895302-34895384)
chr8 (122-203)||(466172-466253)
chr8 (143-203)||(44869837-44869897)
chr8 (121-203)||(6098281-6098363)
chr8 (121-200)||(38644321-38644400)
chr8 (121-191)||(13307931-13308001)
chr8 (151-203)||(27082636-27082688)
chr8 (115-203)||(30654345-30654432)
chr8 (121-203)||(16223203-16223288)
chr8 (124-203)||(18259419-18259498)
chr8 (121-181)||(9864533-9864593)
chr8 (159-203)||(24823200-24823244)
chr8 (147-195)||(40862768-40862816)
chr8 (159-203)||(43026014-43026058)
chr8 (121-203)||(11727364-11727447)
chr8 (125-200)||(39098891-39098966)
chr8 (143-200)||(36694756-36694813)
chr8 (121-190)||(41910826-41910895)
[»] chr4 (49 HSPs)
chr4 (121-202)||(25184455-25184536)
chr4 (121-203)||(6864376-6864458)
chr4 (121-203)||(879336-879418)
chr4 (121-203)||(34361279-34361361)
chr4 (121-203)||(36493477-36493559)
chr4 (121-203)||(46887946-46888028)
chr4 (121-200)||(49376311-49376390)
chr4 (121-203)||(33816304-33816386)
chr4 (121-203)||(35020819-35020901)
chr4 (122-203)||(7703850-7703931)
chr4 (119-203)||(32592425-32592509)
chr4 (121-200)||(19440436-19440515)
chr4 (121-203)||(3042960-3043042)
chr4 (121-200)||(9139571-9139652)
chr4 (133-203)||(28002786-28002856)
chr4 (125-203)||(32579787-32579865)
chr4 (125-202)||(25700848-25700925)
chr4 (139-203)||(7152010-7152074)
chr4 (143-203)||(39400349-39400409)
chr4 (119-203)||(50765061-50765145)
chr4 (116-203)||(32912362-32912449)
chr4 (121-203)||(47254081-47254163)
chr4 (143-200)||(23761415-23761472)
chr4 (118-203)||(27396955-27397040)
chr4 (116-200)||(4205328-4205412)
chr4 (115-199)||(29583982-29584066)
chr4 (143-203)||(55240915-55240975)
chr4 (124-203)||(26896429-26896508)
chr4 (121-203)||(4598323-4598405)
chr4 (121-203)||(5047754-5047836)
chr4 (121-199)||(17272309-17272387)
chr4 (121-203)||(19089241-19089323)
chr4 (121-203)||(23431896-23431978)
chr4 (121-203)||(30002429-30002511)
chr4 (121-203)||(37775999-37776081)
chr4 (138-203)||(1815642-1815706)
chr4 (115-203)||(38012603-38012691)
chr4 (143-203)||(50697583-50697643)
chr4 (121-200)||(42200075-42200153)
chr4 (145-203)||(33341739-33341797)
chr4 (145-203)||(35025379-35025436)
chr4 (121-200)||(37288072-37288152)
chr4 (159-203)||(55477717-55477761)
chr4 (143-198)||(4934022-4934077)
chr4 (125-200)||(17173634-17173709)
chr4 (161-203)||(34947923-34947965)
chr4 (121-203)||(37663529-37663611)
chr4 (143-200)||(17168057-17168114)
chr4 (151-203)||(46883932-46883984)
[»] chr5 (55 HSPs)
chr5 (121-203)||(12910696-12910778)
chr5 (121-203)||(43254196-43254278)
chr5 (125-203)||(31786402-31786480)
chr5 (131-203)||(699491-699563)
chr5 (121-203)||(22981134-22981216)
chr5 (121-203)||(23954554-23954636)
chr5 (121-203)||(24886428-24886510)
chr5 (121-203)||(33908573-33908655)
chr5 (116-203)||(38527984-38528071)
chr5 (125-203)||(22973838-22973916)
chr5 (121-203)||(25889711-25889793)
chr5 (121-203)||(35511234-35511316)
chr5 (121-203)||(40133726-40133808)
chr5 (125-198)||(27318244-27318317)
chr5 (123-203)||(2888199-2888279)
chr5 (116-203)||(36867103-36867190)
chr5 (121-203)||(19120200-19120282)
chr5 (121-203)||(22255523-22255605)
chr5 (121-203)||(39573152-39573234)
chr5 (121-203)||(42343062-42343144)
chr5 (118-203)||(32563481-32563566)
chr5 (143-203)||(15992314-15992374)
chr5 (123-203)||(36860765-36860845)
chr5 (124-203)||(22019964-22020043)
chr5 (125-203)||(23115986-23116064)
chr5 (121-203)||(28416303-28416385)
chr5 (130-203)||(8741646-8741719)
chr5 (143-200)||(14919313-14919370)
chr5 (123-203)||(25669917-25669997)
chr5 (115-203)||(43308406-43308494)
chr5 (140-203)||(35826257-35826320)
chr5 (122-203)||(5830233-5830314)
chr5 (121-203)||(5837896-5837978)
chr5 (133-203)||(8437306-8437376)
chr5 (121-203)||(14409093-14409175)
chr5 (121-203)||(17157783-17157865)
chr5 (121-203)||(25500678-25500760)
chr5 (121-199)||(27330649-27330727)
chr5 (125-203)||(31705368-31705446)
chr5 (114-203)||(26269150-26269239)
chr5 (143-203)||(7208638-7208698)
chr5 (147-203)||(35504706-35504762)
chr5 (125-203)||(8467067-8467145)
chr5 (143-203)||(7693562-7693622)
chr5 (118-186)||(13956113-13956181)
chr5 (143-203)||(35934237-35934297)
chr5 (123-166)||(22616827-22616870)
chr5 (121-167)||(1428925-1428971)
chr5 (121-203)||(9200565-9200647)
chr5 (121-167)||(34853847-34853893)
chr5 (121-166)||(21321087-21321132)
chr5 (151-203)||(15724829-15724881)
chr5 (143-202)||(30969097-30969157)
chr5 (123-162)||(33163854-33163893)
chr5 (159-201)||(21088559-21088601)
[»] chr1 (45 HSPs)
chr1 (121-203)||(10923064-10923146)
chr1 (121-203)||(10181764-10181846)
chr1 (121-203)||(32216392-32216474)
chr1 (119-203)||(27563660-27563744)
chr1 (121-203)||(14758369-14758451)
chr1 (121-203)||(19899525-19899607)
chr1 (121-203)||(22171048-22171130)
chr1 (122-200)||(27266959-27267036)
chr1 (121-203)||(34012139-34012221)
chr1 (121-203)||(46931747-46931829)
chr1 (122-203)||(4330618-4330699)
chr1 (118-203)||(15168433-15168518)
chr1 (114-203)||(48353879-48353968)
chr1 (123-203)||(21289937-21290017)
chr1 (115-203)||(32267371-32267459)
chr1 (124-203)||(2960085-2960164)
chr1 (121-203)||(8222464-8222547)
chr1 (121-203)||(23999685-23999767)
chr1 (125-203)||(30254760-30254838)
chr1 (121-203)||(47682251-47682333)
chr1 (121-203)||(47279526-47279609)
chr1 (125-203)||(11742129-11742207)
chr1 (121-203)||(16415983-16416065)
chr1 (121-203)||(48620926-48621008)
chr1 (143-203)||(1547608-1547668)
chr1 (121-197)||(27532739-27532815)
chr1 (147-203)||(28564566-28564622)
chr1 (120-203)||(27763066-27763149)
chr1 (113-184)||(38759846-38759917)
chr1 (121-203)||(15752366-15752448)
chr1 (122-203)||(9902812-9902893)
chr1 (143-203)||(31621327-31621388)
chr1 (121-198)||(31962959-31963036)
chr1 (143-203)||(7078842-7078902)
chr1 (147-203)||(37451622-37451678)
chr1 (124-203)||(1359696-1359774)
chr1 (121-203)||(15383270-15383353)
chr1 (121-203)||(3535260-3535342)
chr1 (125-203)||(38823551-38823629)
chr1 (151-203)||(28769990-28770042)
chr1 (151-202)||(238300-238351)
chr1 (152-199)||(27227273-27227320)
chr1 (133-195)||(33725380-33725442)
chr1 (147-203)||(39393721-39393777)
chr1 (138-200)||(42721376-42721437)
[»] chr3 (45 HSPs)
chr3 (118-203)||(20373022-20373107)
chr3 (116-203)||(3362587-3362674)
chr3 (123-203)||(11357145-11357225)
chr3 (121-203)||(22445827-22445909)
chr3 (121-203)||(37158040-37158122)
chr3 (121-203)||(37203400-37203482)
chr3 (121-203)||(39282984-39283066)
chr3 (121-203)||(40552021-40552103)
chr3 (121-203)||(46297524-46297606)
chr3 (121-203)||(48355273-48355355)
chr3 (121-203)||(52040684-52040766)
chr3 (121-203)||(53228914-53228996)
chr3 (121-203)||(2008271-2008353)
chr3 (121-203)||(4015791-4015873)
chr3 (121-203)||(11356920-11357002)
chr3 (121-203)||(21193939-21194021)
chr3 (121-203)||(26941022-26941104)
chr3 (121-199)||(33378547-33378625)
chr3 (138-203)||(1090025-1090090)
chr3 (120-203)||(47481855-47481938)
chr3 (121-203)||(11467142-11467224)
chr3 (121-203)||(14586442-14586524)
chr3 (125-203)||(21009567-21009645)
chr3 (121-199)||(22622480-22622558)
chr3 (125-203)||(43975658-43975736)
chr3 (125-203)||(54506140-54506218)
chr3 (116-203)||(29099678-29099766)
chr3 (121-203)||(36012471-36012554)
chr3 (121-180)||(51212539-51212598)
chr3 (121-203)||(42505837-42505919)
chr3 (138-203)||(24707894-24707959)
chr3 (122-203)||(33698485-33698566)
chr3 (143-203)||(44891829-44891889)
chr3 (123-203)||(4761412-4761492)
chr3 (143-203)||(29164134-29164194)
chr3 (147-203)||(35844579-35844635)
chr3 (153-200)||(22451303-22451350)
chr3 (151-203)||(44186308-44186361)
chr3 (140-203)||(3654980-3655044)
chr3 (121-181)||(34133312-34133372)
chr3 (147-203)||(40936305-40936361)
chr3 (154-200)||(50475153-50475199)
chr3 (159-200)||(24488762-24488803)
chr3 (159-203)||(7327282-7327326)
chr3 (147-203)||(25580071-25580127)
[»] chr7 (42 HSPs)
chr7 (111-203)||(37703251-37703343)
chr7 (119-203)||(24212058-24212142)
chr7 (111-203)||(35353424-35353516)
chr7 (117-203)||(9355585-9355671)
chr7 (121-203)||(18797643-18797725)
chr7 (121-203)||(29173838-29173920)
chr7 (121-203)||(31520504-31520586)
chr7 (121-203)||(38258895-38258977)
chr7 (122-203)||(23111508-23111589)
chr7 (121-200)||(7335112-7335191)
chr7 (120-200)||(31578826-31578906)
chr7 (128-203)||(10481921-10481996)
chr7 (121-203)||(4583235-4583317)
chr7 (121-203)||(6546835-6546917)
chr7 (121-203)||(17842347-17842429)
chr7 (121-203)||(21991943-21992025)
chr7 (121-203)||(26587855-26587937)
chr7 (121-203)||(26980622-26980704)
chr7 (121-203)||(32432768-32432850)
chr7 (121-202)||(12390412-12390493)
chr7 (122-203)||(44411304-44411385)
chr7 (143-203)||(37347337-37347397)
chr7 (121-203)||(10358977-10359059)
chr7 (121-203)||(15612522-15612604)
chr7 (121-203)||(37110190-37110272)
chr7 (143-203)||(8861601-8861661)
chr7 (121-203)||(30055843-30055925)
chr7 (121-203)||(37704498-37704580)
chr7 (138-203)||(46480909-46480974)
chr7 (131-203)||(15672532-15672604)
chr7 (159-203)||(32820854-32820898)
chr7 (121-203)||(48928060-48928142)
chr7 (151-203)||(22687547-22687599)
chr7 (147-203)||(41764867-41764923)
chr7 (159-203)||(43925411-43925455)
chr7 (23-100)||(23610169-23610245)
chr7 (121-200)||(27284063-27284144)
chr7 (159-203)||(25691345-25691389)
chr7 (147-203)||(32592996-32593051)
chr7 (143-193)||(12166215-12166265)
chr7 (171-203)||(11071519-11071551)
chr7 (149-203)||(34361967-34362023)
[»] chr2 (32 HSPs)
chr2 (111-203)||(19289093-19289185)
chr2 (121-203)||(29241925-29242007)
chr2 (121-203)||(45328031-45328112)
chr2 (122-203)||(39167150-39167231)
chr2 (121-203)||(4167263-4167345)
chr2 (121-199)||(31862197-31862275)
chr2 (121-203)||(35959233-35959315)
chr2 (121-203)||(41961181-41961263)
chr2 (121-203)||(43648025-43648107)
chr2 (119-203)||(44914008-44914092)
chr2 (121-203)||(33902355-33902438)
chr2 (128-203)||(41465842-41465917)
chr2 (121-203)||(2325158-2325240)
chr2 (121-203)||(19424422-19424504)
chr2 (143-203)||(18494083-18494143)
chr2 (143-203)||(43770650-43770710)
chr2 (121-203)||(11366160-11366242)
chr2 (121-203)||(33660157-33660239)
chr2 (126-203)||(7006723-7006800)
chr2 (140-203)||(26357918-26357981)
chr2 (121-203)||(3177280-3177362)
chr2 (114-203)||(33550755-33550845)
chr2 (143-203)||(5881870-5881930)
chr2 (124-203)||(33709015-33709094)
chr2 (121-200)||(4763975-4764055)
chr2 (140-203)||(37906051-37906115)
chr2 (124-203)||(19500700-19500777)
chr2 (121-203)||(17071550-17071634)
chr2 (119-199)||(31570512-31570592)
chr2 (121-203)||(17053910-17053993)
chr2 (159-200)||(41463408-41463449)
chr2 (118-166)||(6178111-6178159)
[»] chr6 (14 HSPs)
chr6 (121-203)||(6090943-6091025)
chr6 (121-203)||(1946176-1946259)
chr6 (124-203)||(3879703-3879782)
chr6 (119-203)||(7054531-7054615)
chr6 (124-203)||(33892776-33892855)
chr6 (121-203)||(20768423-20768505)
chr6 (143-203)||(8513562-8513622)
chr6 (116-203)||(5627733-5627820)
chr6 (121-203)||(7234793-7234875)
chr6 (143-203)||(29182502-29182562)
chr6 (147-203)||(33619174-33619230)
chr6 (163-203)||(33724062-33724102)
chr6 (154-203)||(6089237-6089286)
chr6 (159-203)||(21016917-21016961)
[»] scaffold0008 (1 HSPs)
scaffold0008 (125-203)||(267617-267695)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-200)||(145777-145856)
[»] scaffold0291 (1 HSPs)
scaffold0291 (121-203)||(8228-8310)
[»] scaffold0061 (1 HSPs)
scaffold0061 (121-203)||(44297-44379)
[»] scaffold0017 (1 HSPs)
scaffold0017 (121-203)||(154408-154490)
[»] scaffold0318 (1 HSPs)
scaffold0318 (121-203)||(12250-12331)
[»] scaffold0002 (3 HSPs)
scaffold0002 (159-203)||(469-513)
scaffold0002 (153-203)||(408223-408273)
scaffold0002 (159-203)||(93901-93944)


Alignment Details
Target: chr8 (Bit Score: 70; Significance: 9e-32; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 43643363 - 43643444
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  43643363 gagcttctatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgt 43643444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 4132454 - 4132536
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  4132454 gagcttctatggtgcagtcagcaaactgacttttttggaaaagttaattttgatcttaatgtgtaattcatttttaaattgtt 4132536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 37970287 - 37970369
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  37970287 gagcttctatggtgcagtcaggaaagtgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 37970369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 41362844 - 41362762
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||||||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  41362844 gagcttctatggtgcagtcaggaaactgacttttttgaaaaaattaattttgatcttaatgtttaattcatttttaaattgtt 41362762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 35459498 - 35459561
Alignment:
Q  140 agaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  35459498 agaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 35459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 5299714 - 5299796
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  5299714 gagcttctatggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgtt 5299796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 16446643 - 16446725
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||    
T  16446643 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgttagattcatttttaaattgtt 16446725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 35859352 - 35859274
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  35859352 ttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 35859274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 34951826 - 34951907
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| ||||||||||  |||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||    
T  34951826 agcttctacggtgcaatcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 34951907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 1149395 - 1149482
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| |||||| |||| ||| ||||||||||| |||| |||| |||||| ||||||||||||||||||||||||||||    
T  1149395 ttagggagcttctacggtgcagtcaggaaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgtt 1149482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 10554972 - 10555055
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaag-ttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||  |||||||| ||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||    
T  10554972 gagcttctatggtgcggtcagaaaattgacttttttgaaaaaaattaattttgatcttaatgtttgattcatttttaaattgtt 10555055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 7890725 - 7890807
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||  |||  ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  7890725 gagcttctacggtgcggtcatgaaactgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaattgtt 7890807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 12588000 - 12587922
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| || | ||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  12588000 ttctatggttcagttagagaactgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattgtt 12587922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 1953753 - 1953838
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||||| |||||| |||| ||||||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||||||    
T  1953753 agagagtttctacggtgcagtcaggaaactgatttttttgaaaaaattaattttgatcttaatgtttgattcattttaaaattgtt 1953838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 8803594 - 8803666
Alignment:
Q  131 ggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||| ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  8803594 ggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 8803666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 23854199 - 23854281
Alignment:
Q  120 agagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||| | |||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  23854199 agagcttttatggtgtagtcaggaaattga-ttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 23854281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 33198229 - 33198142
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| ||||||||||  ||| ||||||||||| |||||||||  || ||||||||| |||||||||||||||||||||    
T  33198229 ttagggagcttctacggtgcaatcatgaaattgacttttttgaaaaagttaatcttaatcttaatgattgattcatttttaaattgtt 33198142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 33906632 - 33906553
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||||||||  ||||| |||||||||||||||||||| ||||||||| |||||||||| | || ||||||||||||||||    
T  33906632 gagcttctacagtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttactattcgattcatttttaaatt 33906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 1205359 - 1205269
Alignment:
Q  111 tttatttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattg 201  Q
    ||||||| | ||||||||| |||| | |||||||| ||||||||||  ||||||||| |||||||||  ||||||||||||||||||||||    
T  1205359 tttattttgggagcttctacggtgtagtcagaaaattgacttttttaaaaaagttaattttgatcttgttgtttgattcatttttaaattg 1205269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 31933654 - 31933732
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    |||||||||||||||| |  | ||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||    
T  31933654 gagcttctatggtgcagttgggaaactgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaat 31933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 34895384 - 34895302
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| | || ||| ||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  34895384 gagcttctacggtgcagttaggaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 34895302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 466253 - 466172
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| |||||| |||  ||||||| ||||||| | ||||||| ||| |||||||||||||||||||||||||||||||    
T  466253 agcttctacggtgcagtcatgaaactgatttttttgaataagttaattttaatcttaatgtttgattcatttttaaattgtt 466172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 44869897 - 44869837
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  44869897 aaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 44869837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 6098281 - 6098363
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgactttttt-ggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| | |||||||||| |||||| || ||||||||   |||||||||||||||||||||||||||||||||    
T  6098281 gagcttctatggtgcatt-agaaaactgattttttttgggaaagttaatcatgatcttaatgtttgattcatttttaaattgtt 6098363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 38644400 - 38644321
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||||| || |||||| |||  ||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||    
T  38644400 gagcttttacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaatt 38644321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 13308001 - 13307931
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcat 191  Q
    ||||||||||||||||||||  ||| ||||| ||||| ||||||||| ||| |||||||||||||||||||    
T  13308001 gagcttctatggtgcaatcatgaaattgactattttgaaaaagttaattttaatcttaatgtttgattcat 13307931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 27082636 - 27082688
Alignment:
Q  151 ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  27082636 ttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgtt 27082688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 30654345 - 30654432
Alignment:
Q  115 tttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| ||| ||||| |||||| |||| ||||||| ||||||| ||||||||| |||||| ||||| ||||||||| ||||||||||||    
T  30654345 tttagggagtttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatatttgattca-ttttaaattgtt 30654432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 16223288 - 16223203
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaag---ttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||| || ||||||||||||||||||   ||||    |||| |||||| ||||||||||||||||||||||||||||    
T  16223288 gagcttctatggtccagtcagaaaactgactttttgaaaaaaaaaattaattttgattttaatgtttgattcatttttaaattgtt 16223203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 18259498 - 18259419
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||| |||  ||| ||||||||||| ||| ||||| ||| || |||||| |||||||||||||||||||||    
T  18259498 cttctatggtgcagtcatgaaattgacttttttgaaaaggttaattttaattttaatgattgattcatttttaaattgtt 18259419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 9864593 - 9864533
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatg 181  Q
    ||||||||| |||||| | || ||||||||||||||| ||||||||| ||| |||||||||    
T  9864593 gagcttctaaggtgcagttaggaaactgacttttttgaaaaagttaattttaatcttaatg 9864533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 24823200 - 24823244
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||    
T  24823200 aaaagttaattttaatcttaatgtttgatttatttttaaattgtt 24823244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 40862816 - 40862768
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcattttt 195  Q
    ||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  40862816 tgacttttttgaaaaagttacttttaatcttaatgtttgattcattttt 40862768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 43026058 - 43026014
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||    
T  43026058 aaaagttaattttaattttaatgtttgattcatttttaaattgtt 43026014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 11727447 - 11727364
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgac-ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||| |||| ||||||  ||||||||| ||| ||||||||  |||||||||||||||||||||    
T  11727447 gagcttctacggtgcagtcatgaaattgacattttttaaaaaagttaattttaatcttaataattgattcatttttaaattgtt 11727364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 39098891 - 39098966
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||| ||||||||||  ||||||| ||||||  |||| |||| ||| || |||||||||||| ||||||||||||    
T  39098891 ttctacggtgcaatcatgaaactgatttttttaaaaaaattaattttaattttaatgtttgatgcatttttaaatt 39098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 36694756 - 36694813
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||| ||||||| ||||||||  ||| || ||||||||||||| |||||||||||    
T  36694756 aaactgatttttttgaaaaagttacttttaattttaatgtttgatttatttttaaatt 36694813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 41910826 - 41910895
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattca 190  Q
    |||||||||||||||| |||  ||  ||||||||||  ||||||||| ||| |||| |||||||||||||    
T  41910826 gagcttctatggtgcagtcattaatttgacttttttaaaaaagttaattttaatctgaatgtttgattca 41910895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 9e-32; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 25184536 - 25184455
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  25184536 gagcttctatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgt 25184455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 6864458 - 6864376
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  6864458 gagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 6864376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 879336 - 879418
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||| | ||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||    
T  879336 gagcttctatggtgtagtcagaaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 879418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 34361279 - 34361361
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  34361279 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 34361361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 36493477 - 36493559
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  36493477 gagcttctatggtgcagtcaggaaattgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 36493559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 46887946 - 46888028
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  46887946 gagcttctacggtgcaatcaggaaactgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgtt 46888028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 49376390 - 49376311
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  49376390 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaatt 49376311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 33816304 - 33816386
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||| |||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  33816304 gagcttctacgatgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgtt 33816386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 35020819 - 35020901
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||| | |||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  35020819 gagcttctacggtgtagtcagaaaactgactcttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 35020901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 7703931 - 7703850
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| |||||| |||  ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  7703931 agcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 7703850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 32592509 - 32592425
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| ||||| |||||| ||| |||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  32592509 gagagtttctacggtgcagtcataaaattgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 32592425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 19440436 - 19440515
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| |||||| |||| ||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||    
T  19440436 gagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattaatttttaaatt 19440515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 3043042 - 3042960
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  3043042 gagcttctacggtgcagtcaagaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 3042960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 9139652 - 9139571
Alignment:
Q  121 gagcttctatggtg--caatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||||||||  || | || ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  9139652 gagcttctatggtgtgcagtgaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaatt 9139571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 28002786 - 28002856
Alignment:
Q  133 tgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  28002786 tgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgtt 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 32579865 - 32579787
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| | |||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||||    
T  32579865 ttctacggtgcagttagaaaactgacttttttgaaaaaattaattttgatcttaatgtttgatttatttttaaattgtt 32579787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 25700848 - 25700925
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgt 202  Q
    ||||| |||||| | || ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  25700848 ttctacggtgcagttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgt 25700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 7152010 - 7152074
Alignment:
Q  139 cagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||    
T  7152010 cagaaaactgacttttttgaaaaagttatttttcatcttaatgtttgattcatttttaaattgtt 7152074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 39400409 - 39400349
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  39400409 aaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 39400349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 50765145 - 50765061
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||||||||||  ||||  ||||||||  ||||||||| ||| |||||||||||||||||||||||||||||||    
T  50765145 gagagcttctacggtgcaatcatgaaacaaacttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 50765061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 32912362 - 32912449
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||||| || |||||| |||| ||||||||||||||| |||| || | |||||| ||||||||||||||||||||||||||||    
T  32912362 ttagggagcttttacggtgcagtcaggaaactgacttttttgaaaaaattcattttgattttaatgtttgattcatttttaaattgtt 32912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 47254163 - 47254081
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||| | |||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  47254163 gagcttctacggtggagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 47254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 23761472 - 23761415
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  23761472 aaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaatt 23761415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 27397040 - 27396955
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| || ||||||||||  ||||||| |||||   ||||||||| ||| |||||||||||||||||||||||||||||||    
T  27397040 agagagcttttacggtgcaatcatgaaactgattttttaaaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 27396955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 4205412 - 4205328
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||| ||||||||| |||||| |||  ||||||||||||||| ||||||||  ||| || |||||||||||||||||||||||||    
T  4205412 ttagggagcttctacggtgcagtcaagaaactgacttttttgaaaaagttacttttaattttaatgtttgattcatttttaaatt 4205328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 29583982 - 29584066
Alignment:
Q  115 tttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    ||||| ||||||||| |||||| |||  ||| |||||| |||| ||||||||| ||| |||||||||||||||||||||||||||    
T  29583982 tttagggagcttctacggtgcagtcatgaaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaat 29584066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 55240915 - 55240975
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||||    
T  55240915 aaactgacttttttgaaaaatttaattttaatcttaatgtttgattcatttttaaattgtt 55240975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 26896508 - 26896429
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||| |||| ||| ||||||||||  ||||||||| |||||| |||||||| |||||||||||||||||||    
T  26896508 cttctacggtgcagtcaggaaattgacttttttaaaaaagttaattttgattttaatgttcgattcatttttaaattgtt 26896429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 4598405 - 4598323
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  |||||||||||||   ||| ||||| ||| |||||||||||||||||||||||||||||||    
T  4598405 gagcttctacggtgcagtcatgaaactgactttttgtaaaatgttaattttaatcttaatgtttgattcatttttaaattgtt 4598323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 5047754 - 5047836
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| || |||||| |||| |||| |||||||||| |||| |||| |||||| |||||||| |||||||||||||||||||    
T  5047754 gagcttttacggtgcagtcaggaaacagacttttttgaaaaaattaattttgattttaatgttcgattcatttttaaattgtt 5047836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 17272387 - 17272309
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    ||||||||| |||||| |||  ||| |||||| |||| ||||||||| ||| |||||||||||||||||||||||||||    
T  17272387 gagcttctacggtgcagtcatgaaattgacttatttgaaaaagttaattttaatcttaatgtttgattcatttttaaat 17272309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 19089241 - 19089323
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||| |||||||||||  |||||||| |||||| |||| | |||||||||||||||||||||    
T  19089241 gagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgtt 19089323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 23431978 - 23431896
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||  ||||| |||  ||||||||||||||| ||||||||| ||| || |||||||||||| |||||||||||||||    
T  23431978 gagcttctacagtgcagtcatgaaactgacttttttgaaaaagttaattttaattttaatgtttgatgcatttttaaattgtt 23431896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 30002429 - 30002511
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| | |  ||| |||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||    
T  30002429 gagcttctacggtgcagttatgaaattgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 30002511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 37776081 - 37775999
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||| ||||||||||  ||||||||| ||  |||||||||||||||||||||||||||||||    
T  37776081 gagcttctacggtgcagtcatgaaattgacttttttaaaaaagttaatttcaatcttaatgtttgattcatttttaaattgtt 37775999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 1815706 - 1815642
Alignment:
Q  138 tcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| |||||||||   ||||||||| |||||||||||||||||||||||||||||||||||    
T  1815706 tcagaaaattgactttttaa-aaaagttaattttgatcttaatgtttgattcatttttaaattgtt 1815642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 38012691 - 38012603
Alignment:
Q  115 tttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| ||  ||||| |||| ||||| | ||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  38012691 tttagggagcttttacagtgcagtcaggaaactaatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgtt 38012603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 50697643 - 50697583
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| |||| |||| ||| || ||||||||||||||||||||||||||||    
T  50697643 aaactgacttttttgaaaaaattaatttttattttaatgtttgattcatttttaaattgtt 50697583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 42200153 - 42200075
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| ||||||||||| ||| |||| |||||| ||||||| |||||||| || |||||||||| |||||||||||    
T  42200153 gagcttctacggtgcaatcaggaaattgacctttttgaaaaagtt-aatttgattttgatgtttgattaatttttaaatt 42200075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 33341797 - 33341739
Alignment:
Q  145 actgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||  |||| |||| ||| |||||||||||||||||||||||||||||||    
T  33341797 actgacttttttaaaaaaattaattttaatcttaatgtttgattcatttttaaattgtt 33341739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 35025379 - 35025436
Alignment:
Q  145 actgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||| || ||||||||| |||||| ||||||||||||||||||||||||||||    
T  35025379 actgacttttatgaaaaagttaattttgat-ttaatgtttgattcatttttaaattgtt 35025436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 37288152 - 37288072
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttga-tcttaatgtttgattcatttttaaatt 200  Q
    ||||||| | |||||| |||  ||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||||||||    
T  37288152 gagcttccacggtgcagtcatgaaagtgacttttttgaaaaagttaattttaaatcttaatgtttgattcatttttaaatt 37288072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 55477717 - 55477761
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  55477717 aaaaattaattttgatcttaatgtttgattcatttttaaattgtt 55477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 4934022 - 4934077
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaa 198  Q
    ||||||||||||||| | ||||||| |||||||||||||||| ||| |||||||||    
T  4934022 aaactgacttttttgaacaagttaattttgatcttaatgtttaatttatttttaaa 4934077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 17173709 - 17173634
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||| |||||| |||  ||||||||||||||| |||| |||  ||| || |||||||||||||||||||||||||    
T  17173709 ttctacggtgcagtcaagaaactgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaatt 17173634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 34947923 - 34947965
Alignment:
Q  161 aagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  34947923 aagttaattttaatcttaatgtttgattcatttttaaattgtt 34947965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 37663529 - 37663611
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| || |||| ||| ||||||||||   |||||||| |||||| |||| | |||||||||||||||||||||    
T  37663529 gagcttctacggtacagtcaggaaattgacttttttaataaagttaattttgattttaacgattgattcatttttaaattgtt 37663611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 17168114 - 17168057
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||||||||| |||| |||  ||| || |||||||||||||||||||||||||    
T  17168114 aaactgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaatt 17168057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 46883932 - 46883984
Alignment:
Q  151 ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| |||| |||| ||| || ||||||||||||| ||||||||||||||    
T  46883932 ttttttgaaaaaattaatttttattttaatgtttgatttatttttaaattgtt 46883984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 12910778 - 12910696
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  12910778 gagcttctatggtgcagtcaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 12910696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 43254278 - 43254196
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43254278 gagcttctatggtgcagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 43254196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 31786402 - 31786480
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  31786402 ttctatggtgcaatcaggaaactgacttttttgaaaaagttaattttgatattaatgtttgattcatttttaaattgtt 31786480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 699563 - 699491
Alignment:
Q  131 ggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  699563 ggtgcagtcaggaaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 699491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 22981216 - 22981134
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| |||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||    
T  22981216 gagcttctatggtgcagtcaggaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 22981134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 23954554 - 23954636
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||    
T  23954554 gagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattatgatcttaatgtttaattcatttttaaattgtt 23954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 24886510 - 24886428
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||||||||| |||  ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  24886510 gagcttttatggtgcagtcaagaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 24886428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 33908655 - 33908573
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| |||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  33908655 gagcatctacggtgcagttagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 33908573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 38527984 - 38528071
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| |||||| |||| ||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  38527984 ttagggagcttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 38528071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 22973838 - 22973916
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||| |||||||||||| ||||||  ||||||||| ||| |||||||||||||||||||||||||||||||    
T  22973838 ttctatggtgcagtcagaaaactgattttttttaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 22973916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 25889793 - 25889711
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||| |||| |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  25889793 gagcttctacgatgcagtcaggaaactgacttttctggaaaagttaattttgatcttaatgtttaattcatttttaaattgtt 25889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 35511234 - 35511316
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  35511234 gagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 35511316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 40133808 - 40133726
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  40133808 gagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgtt 40133726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 27318244 - 27318317
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaa 198  Q
    |||||||||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||||||    
T  27318244 ttctatggtgcagtcagaaaactgacttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaa 27318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 2888199 - 2888279
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| |||||| |||||||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  2888199 gcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 2888279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 36867190 - 36867103
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| |||||| |||||||| ||||||||||  ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  36867190 ttagggagcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgtttaattcatttttaaattgtt 36867103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 19120282 - 19120200
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  19120282 gagcttctaaggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 19120200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 22255605 - 22255523
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| || |||| ||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  22255605 gagcttctacggtacagtcaggaaactgactttttttaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 22255523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 39573234 - 39573152
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| | |  ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  39573234 gagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 39573152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 42343144 - 42343062
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  |||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||    
T  42343144 gagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 42343062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 32563566 - 32563481
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||| |||||| | |  ||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  32563566 agagagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 32563481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 15992314 - 15992374
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  15992314 aaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 15992374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 36860845 - 36860765
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| |||||| |||||||| ||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  36860845 gcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgcttgattcatttttaaattgtt 36860765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 22020043 - 22019964
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||| |||  ||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||    
T  22020043 cttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatatttgattcatttttaaattgtt 22019964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 23115986 - 23116064
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||| | |||| ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  23115986 ttctacggtgaagtcaggaaaatgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 23116064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 28416303 - 28416385
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  || |||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  28416303 gagcttctacggtgcagtcatgaagctgacttttttgaaaaagttaattttaatcttaatgtttgattcttttttaaattgtt 28416385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 8741646 - 8741719
Alignment:
Q  130 tggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| |||  |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  8741646 tggtgcagtcatgaaacagacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 8741719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 14919313 - 14919370
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  14919313 aaactgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaatt 14919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 25669997 - 25669917
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| |||||| |||  ||||||| ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  25669997 gcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 25669917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 43308406 - 43308494
Alignment:
Q  115 tttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| ||||||| |||||||| | || ||||||||||||||| ||||||||| |||||| ||| | |||||||| |||||||||||||    
T  43308406 tttagggagcttcaatggtgcagttaggaaactgacttttttgaaaaagttaattttgattttagtatttgattcgtttttaaattgtt 43308494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 35826257 - 35826320
Alignment:
Q  140 agaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||  ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  35826257 agaaaactggttttttttaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 35826320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 5830314 - 5830233
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttga-ttcatttttaaattgtt 203  Q
    |||||||| |||||| |||||||| |||| |||| ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  5830314 agcttctacggtgcagtcagaaaattgacatttt-ggaaaagttaattttgattttaatgtttgatttcatttttaaattgtt 5830233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 5837978 - 5837896
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| ||||||| |||  ||||||||||||||| ||| ||||| ||| || |||||| |||||||||||||||||||||    
T  5837978 gagcttctctggtgcagtcatcaaactgacttttttgaaaaggttaattttaattttaatgattgattcatttttaaattgtt 5837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 8437376 - 8437306
Alignment:
Q  133 tgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| ||||||||||||||| ||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  8437376 tgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatatttaattcatttttaaattgtt 8437306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 14409093 - 14409175
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||| ||||||| |||| |||| ||| || |||||||| |||||||||||||||||||    
T  14409093 gagcttctacggtgcagtcaggaaactgatttttttgaaaaatttaattttaattttaatgttcgattcatttttaaattgtt 14409175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 17157783 - 17157865
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| || |||  ||| ||||||||||| |||||| || |||||| ||||||||||||||||||||||||||||    
T  17157783 gagcttctacggtacagtcaagaaattgacttttttgaaaaagtcaagtttgattttaatgtttgattcatttttaaattgtt 17157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 25500678 - 25500760
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||| ||||||| ||||||||| ||| |||||| | ||||||||||||||||||||||    
T  25500678 gagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttagtatttgattcatttttaaattgtt 25500760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 27330727 - 27330649
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    ||||||||| |||||| |||  ||| |||||| |||| ||||||||| ||| |||||||||||||||||||||||||||    
T  27330727 gagcttctacggtgcagtcatgaaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaat 27330649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 31705368 - 31705446
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||  ||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  31705368 ttctacggtgcagtcaagaaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgtt 31705446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 26269239 - 26269150
Alignment:
Q  114 atttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||| ||||| |||||| |||  |||||||||||| || ||||||||| ||| ||||||||| ||| |||||||||||||||||    
T  26269239 atttagggagtttctacggtgcagtcatgaaactgacttttatgaaaaagttaattttaatcttaatgattggttcatttttaaattgtt 26269150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 7208638 - 7208698
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||  ||||||||| ||| || ||||||||||||||||||||||||||||    
T  7208638 aaactgactttttttaaaaagttaatttttattttaatgtttgattcatttttaaattgtt 7208698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 35504762 - 35504706
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| |||||| || |||||| ||||||||||||||||||||||||||||    
T  35504762 tgacttttttgaaaaagtcaattttgattttaatgtttgattcatttttaaattgtt 35504706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 8467145 - 8467067
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||||  ||||||| ||||||  ||||||||| |||  | ||||||||||||||||||||||| ||||    
T  8467145 ttctatggtgcaatcattaaactgattttttttaaaaagttaattttatttttaatgtttgattcatttttaaactgtt 8467067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 7693622 - 7693562
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||| |  ||||||||| ||| || ||||||||||||||||||||||||||||    
T  7693622 aaactgacttttctaaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 7693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 13956113 - 13956181
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttga 186  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||| ||||| |||||| |||||||||||    
T  13956113 agagagcttctacggtgcagtcagaaagctgatttttttgaaaatgttaattttgattttaatgtttga 13956181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 35934297 - 35934237
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||| ||||||||| ||| || ||||||||||| ||||||||||||||||    
T  35934297 aaactgatttttttgaaaaagttaattttaattttaatgtttgaatcatttttaaattgtt 35934237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 22616870 - 22616827
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagtta 166  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  22616870 gcttctatggtgcagtcagaaaactgatttttttggaaaagtta 22616827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 1428925 - 1428971
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaa 167  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||    
T  1428925 gagcttctatggtgcactcatgaaactgacttttttggaaaagttaa 1428971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 9200647 - 9200565
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||| ||||||| |||| |||| ||| || ||||  ||||||||||||||||||||||    
T  9200647 gagcttctacggtgcagtcatgaaactgatttttttgaaaaaattaattttaattttaaattttgattcatttttaaattgtt 9200565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 34853847 - 34853893
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaa 167  Q
    |||||||||||||||| || | |||||||||||||||||||||||||    
T  34853847 gagcttctatggtgcagtcgggaaactgacttttttggaaaagttaa 34853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 21321132 - 21321087
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagtta 166  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  21321132 gagcttctatggtgcagccagaaaactgacttttttgaaaaagtta 21321087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 15724881 - 15724829
Alignment:
Q  151 ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||||| ||| |  ||||||||||||||||||||||||||||    
T  15724881 ttttttgaaaaagttaattttaactttaatgtttgattcatttttaaattgtt 15724829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 30969097 - 30969157
Alignment:
Q  143 aaactgacttttttggaaaa-gttaaatttgatcttaatgtttgattcatttttaaattgt 202  Q
    ||||||||||||||  |||| ||||| ||| || |||||||||||||||||||||||||||    
T  30969097 aaactgactttttttaaaaaagttaattttaattttaatgtttgattcatttttaaattgt 30969157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 33163893 - 33163854
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaa 162  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  33163893 gcttctacggtgcaatcagaaaaccgacttttttggaaaa 33163854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 21088559 - 21088601
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattg 201  Q
    |||| |||| ||| |||||||||||||||||||||||||||||    
T  21088559 aaaaattaactttaatcttaatgtttgattcatttttaaattg 21088601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 10923146 - 10923064
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  10923146 gagcttctatggtgcagtcagaaaactgactcttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 10923064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 10181764 - 10181846
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  10181764 gagcttctatggtgcagtcaggaaactaacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 10181846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 32216474 - 32216392
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  32216474 gagcttctacggtgcagtcagaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 32216392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 27563660 - 27563744
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||||||||| |||| ||||||| ||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  27563660 gagagtttctatggtgcagtcaggaaactgatttttttggaaaagttaattatgatcttaatgtttgattcttttttaaattgtt 27563744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 14758451 - 14758369
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  14758451 gagcttctacggtgcagtcacgaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgtt 14758369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 19899525 - 19899607
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||  ||||| | || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  19899525 gagcttctacagtgcagttaggaaactgacttttttggaaaagttaattttgattttaatgtttgattcatttttaaattgtt 19899607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 22171130 - 22171048
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||||| |||||||||| ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||    
T  22171130 gagcttctacggtgcaattagaaaactgatttttttgaaaaagttaattttgattttaatgtttgatttatttttaaattgtt 22171048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 27266959 - 27267036
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  27266959 agcttctatggtgcattcaggaaactgactttt-tggaaaagttaattttgatcttaatgtttaattcatttttaaatt 27267036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 34012139 - 34012221
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  34012139 gagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 34012221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 46931829 - 46931747
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  46931829 gagcttctacggtgcagtaaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 46931747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 4330699 - 4330618
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| |||||| ||||| |||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  4330699 agcttctacggtgcagtcagacaactgatttttttggaaaaattaattttgatcttaatgtttgattcatttttatattgtt 4330618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 15168518 - 15168433
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||| |||||| | || ||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  15168518 agagagcttctacggtgcagttaggaaactgatttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgtt 15168433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 48353968 - 48353879
Alignment:
Q  114 atttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||||||||| |||||| |||  ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  48353968 atttagggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 48353879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 21290017 - 21289937
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| | | ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  21290017 gcttatatggtgcagttaaaaaactgacttttttagaaaaattaattttgatcttaatgtttgattcatttttaaattgtt 21289937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 32267459 - 32267371
Alignment:
Q  115 tttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| ||||||||| |||||| |||| ||| ||||||||||| |||| |||| |||||| ||||||||||||||||||||||||||||    
T  32267459 tttagggagcttctacggtgcagtcaggaaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgtt 32267371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 2960164 - 2960085
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||| |||| ||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  2960164 cttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 2960085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 8222547 - 8222464
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttga-ttcatttttaaattgtt 203  Q
    ||||||||| ||| || |||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||    
T  8222547 gagcttctacggtacagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgtt 8222464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 23999767 - 23999685
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||| |||| |||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  23999767 gagcttctatggtgcagtcaggaaattgacctttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 23999685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 30254838 - 30254760
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||| ||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  30254838 ttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 30254760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 47682251 - 47682333
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||| ||| |||||||||||| |||| |||||||||||||    
T  47682251 gagcttctatggtgcagtcagtaaactgacttttttgaacaagttaattttaatcttaatgtttaattcttttttaaattgtt 47682333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 47279609 - 47279526
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaa-gttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| ||| |||||||| |||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  47279609 gagcttctacggtgcagtcataaaactgattttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 47279526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 11742129 - 11742207
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| ||| |||  ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  11742129 ttctatggcgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 11742207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 16416065 - 16415983
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| || ||| ||| | |||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  16416065 gagcttctacggcgcagtcaaataactaacttttttagaaaaattaattttgatcttaatgtttgattcatttttaaattgtt 16415983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 48621008 - 48620926
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  |||||||||||| || ||||||||| ||| |||||||||||||||||||||| ||||||||    
T  48621008 gagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcattttaaaattgtt 48620926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 1547668 - 1547608
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||||    
T  1547668 aaactgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaattgtt 1547608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 27532739 - 27532815
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaa 197  Q
    ||||||||| |||||| |||  ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  27532739 gagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaa 27532815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 28564566 - 28564622
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  28564566 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 28564622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 27763066 - 27763149
Alignment:
Q  120 agagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||| ||| || |||| ||| |||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  27763066 agagtttctacggtacagtcaggaaattgacatttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 27763149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 38759917 - 38759846
Alignment:
Q  113 tatttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgttt 184  Q
    ||||||| |||||||||||||||| |||   |||||||||||||| ||||||||| ||||||||||||||||    
T  38759917 tatttagggagcttctatggtgcagtcaattaactgacttttttgaaaaagttaattttgatcttaatgttt 38759846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 15752448 - 15752366
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||| ||| |||||   |||| |||| |||||||||||||||| ||||||||||||||||||    
T  15752448 gagcttctacggtgcagtcagaaaattgattttttaaaaaaaattaattttgatcttaatgtttaattcatttttaaattgtt 15752366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 9902812 - 9902893
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| |||||| |||  ||  ||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  9902812 agcttctacggtgcagtcaagaatttgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgtt 9902893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 31621327 - 31621388
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattca-tttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||    
T  31621327 aaactgacttttttgaaaaagttaattttgatcttaatgttcgattcattttttaaattgtt 31621388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 31963036 - 31962959
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaa 198  Q
    ||||||||| |||||| | |  ||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||    
T  31963036 gagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaa 31962959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 7078842 - 7078902
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  7078842 aaactgatttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 7078902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 37451678 - 37451622
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  37451678 tgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgtt 37451622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 1359696 - 1359774
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||| ||||||||||||||| ||   ||||   ||||||||||||||||||||||||||||||||||||||    
T  1359696 cttctacggtgcagtcagaaaactgacttgttaaaaaaaaa-aaatttgatcttaatgtttgattcatttttaaattgtt 1359774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 15383353 - 15383270
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttga-ttcatttttaaattgtt 203  Q
    ||||||||| ||| || |||| ||| ||| ||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||    
T  15383353 gagcttctacggttcagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgtt 15383270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 3535342 - 3535260
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||| | |||  ||||||| ||||||  ||||||||  ||| |||||||||||||||||||||||||||||||    
T  3535342 gagcttctacggtgtagtcatgaaactgattttttttaaaaagttagttttaatcttaatgtttgattcatttttaaattgtt 3535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 38823629 - 38823551
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||  ||||||||||||||  ||||||||| ||| |||||||| |||| |||||||||||||||||    
T  38823629 ttctacggtgcagtcatgaaactgacttttttaaaaaagttaattttaatcttaatatttgtttcatttttaaattgtt 38823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 28770042 - 28769990
Alignment:
Q  151 ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  28770042 ttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 28769990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 238300 - 238351
Alignment:
Q  151 ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgt 202  Q
    ||||||| ||||||| | ||| ||||||||||||||||||||||||||||||    
T  238300 ttttttgaaaaagttgattttaatcttaatgtttgattcatttttaaattgt 238351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 27227273 - 27227320
Alignment:
Q  152 tttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  27227273 tttttggaaaagttaattttgatattaatgtttaattcatttttaaat 27227320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 33725380 - 33725442
Alignment:
Q  133 tgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcattttt 195  Q
    |||| |||| ||||||| ||||||| ||||||| | ||||||||||||||| |||||||||||    
T  33725380 tgcagtcaggaaactgatttttttgaaaaagtttattttgatcttaatgttcgattcattttt 33725442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39393777 - 39393721
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||  ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  39393777 tgacttttttaaaaaagttaattttaattttaatgttttattcatttttaaattgtt 39393721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 42721437 - 42721376
Alignment:
Q  138 tcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||||||| ||| ||||||  ||||||||| | |||| |||||||||||||||||||||||||    
T  42721437 tcagaaaattga-ttttttaaaaaagttaattatgattttaatgtttgattcatttttaaatt 42721376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 2e-29; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 20373022 - 20373107
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  20373022 agagagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 20373107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 3362674 - 3362587
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||||||||||||||| |||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  3362674 ttagggagcttctatggtgcagtcaggaaattgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 3362587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 11357145 - 11357225
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| | |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11357145 gcttctacgatgcagtcagacaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 11357225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 22445827 - 22445909
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  22445827 gagcttctatagtgcagtcaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatatttaaattgtt 22445909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 37158122 - 37158040
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  37158122 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 37158040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 37203482 - 37203400
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  37203482 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 37203400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 39283066 - 39282984
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  39283066 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 39282984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 40552021 - 40552103
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| || | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  40552021 gagcttctacggtgcagtctggaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 40552103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 46297524 - 46297606
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| ||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  46297524 gagcttctacggtgcagtcaaaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 46297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 48355355 - 48355273
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| | || ||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  48355355 gagcttctatggtgcagttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 48355273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 52040684 - 52040766
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||| ||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52040684 gagcttctacgctgcagtcatacaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 52040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 53228914 - 53228996
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| ||||  |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53228914 gagcttctacggtgcagtcaggcaactgatttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 53228996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 2008353 - 2008271
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| || ||||||||||  ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  2008353 gagcttttacggtgcaatcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 2008271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 4015873 - 4015791
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  4015873 gagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 4015791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 11356920 - 11357002
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| |||||| ||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  11356920 gagcatctacggtgcagtcagacaactgacttttttgaaaaagttaattttgatcttaatgttggattcatttttaaattgtt 11357002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 21194021 - 21193939
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  21194021 gagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 21193939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 26941022 - 26941104
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||    
T  26941022 gagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaacgcttgattcatttttaaattgtt 26941104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 33378547 - 33378625
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    ||||||||| |||||| |||| ||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||||    
T  33378547 gagcttctacggtgcagtcaggaaactgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaat 33378625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 1090090 - 1090025
Alignment:
Q  138 tcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  1090090 tcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 1090025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 47481938 - 47481855
Alignment:
Q  120 agagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||| ||| || |||| ||| ||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  47481938 agagcttctacggtacagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 47481855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 11467224 - 11467142
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| |||  |||||||| |||||||||||||||||||||    
T  11467224 gagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttattcttaatgattgattcatttttaaattgtt 11467142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 14586442 - 14586524
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| ||   ||||||||||||||| |||| |||| ||| |||||||||||||||| ||||||||||||||    
T  14586442 gagcttctatggtgcactcgtgaaactgacttttttgaaaaaattaattttaatcttaatgtttgatttatttttaaattgtt 14586524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 21009567 - 21009645
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||| ||||||||||||||  |||| |||| |||||| ||||||||||||||||||||||||||||    
T  21009567 ttctacggtgcagtcaggaaactgacttttttaaaaaaattaattttgattttaatgtttgattcatttttaaattgtt 21009645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 22622480 - 22622558
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    |||||| || |||||| |||| ||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  22622480 gagcttttacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaat 22622558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 43975658 - 43975736
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||||||||||||| ||||| |||| ||||  |||||||||||||| |||||||||||||||||||    
T  43975658 ttctacggtgcagtcagaaaactgactcttttgaaaaaattaatcttgatcttaatgttcgattcatttttaaattgtt 43975736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 54506218 - 54506140
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||| |||| ||| ||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  54506218 ttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 54506140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 29099766 - 29099678
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaa-gttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| |||||| |||  |||||||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||||||    
T  29099766 ttagggagcttctacggtgcagtcatgaaactgactttttttgaaaaagttaattttaatattaatgtttgattcatttttaaattgtt 29099678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 36012554 - 36012471
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaa-tttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| |||||||||| ||| || ||||||||||||| ||||||||||||||    
T  36012554 gagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaaattttaattttaatgtttgatttatttttaaattgtt 36012471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 51212539 - 51212598
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaat 180  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  51212539 gagcttctatggtgcagtcagaaaactgacatttttgaaaaagttaattttgatcttaat 51212598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 42505837 - 42505919
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||| |||||||||||  |||||||| |||||| |||| | |||||||||||||||||||||    
T  42505837 gagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgtt 42505919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 24707894 - 24707959
Alignment:
Q  138 tcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| ||| ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  24707894 tcagaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 24707959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 33698566 - 33698485
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| |||||| | |  ||||||||||||||| ||||||||| ||| |||||||||  ||||||||||||||||||||    
T  33698566 agcttctacggtgcatttatgaaactgacttttttgaaaaagttaattttaatcttaatgactgattcatttttaaattgtt 33698485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 44891889 - 44891829
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  44891889 aaactgacttttttaaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 44891829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 4761412 - 4761492
Alignment:
Q  123 gcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| ||||| |||  ||| | ||||||||  ||||||||| |||||| ||||||||||||||||||| ||||||||    
T  4761412 gcttctatagtgcattcaagaaagttactttttttaaaaagttaattttgattttaatgtttgattcattttcaaattgtt 4761492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 29164194 - 29164134
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||| |  ||||||||| ||| |||||||||||||||| ||||||||||||||    
T  29164194 aaactgacttttctaaaaaagttaattttaatcttaatgtttgatttatttttaaattgtt 29164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 35844635 - 35844579
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||    
T  35844635 tgacttttttgaaaaagttaattttaattttaatgtttgatttatttttaaattgtt 35844579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 22451350 - 22451303
Alignment:
Q  153 ttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  22451350 ttttgaaaaagttaattttgatcttaatgttcgattcatttttaaatt 22451303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 44186308 - 44186361
Alignment:
Q  151 ttttttggaaaa-gttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  44186308 ttttttcgaaaatgttaattttaatcttaatgtttgattcatttttaaattgtt 44186361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 3654980 - 3655044
Alignment:
Q  140 agaaaactgacttttttggaaaagttaaatttgatcttaatgtttga-ttcatttttaaattgtt 203  Q
    |||||||||| ||||||| ||| ||||| |||||| ||||||||||| || ||||||||||||||    
T  3654980 agaaaactgatttttttgaaaatgttaattttgattttaatgtttgattttatttttaaattgtt 3655044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 34133372 - 34133312
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatg 181  Q
    ||||||||| |||||| | || ||||||||||||||| ||||||||| ||| |||||||||    
T  34133372 gagcttctaaggtgcagttaggaaactgacttttttgaaaaagttaattttaatcttaatg 34133312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 40936361 - 40936305
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||||||||| ||  ||||||||| |||||| ||||||||||||||    
T  40936361 tgacttttttgaaaaagttaatttcaatcttaatgattgatttatttttaaattgtt 40936305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 50475199 - 50475153
Alignment:
Q  154 tttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||| |||| |||| |||||| |||||||||||||||||||||||||    
T  50475199 tttgaaaaatttaattttgattttaatgtttgattcatttttaaatt 50475153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 24488762 - 24488803
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| ||| || |||||||||||||||||||||||||    
T  24488762 aaaagttaattttaatattaatgtttgattcatttttaaatt 24488803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 7327282 - 7327326
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| ||||||||  |||||||||||||||||||||    
T  7327282 aaaagttaattttaatcttaataattgattcatttttaaattgtt 7327326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 25580127 - 25580071
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||  |||||||||  || ||||||||| ||| |||||||||||||||||    
T  25580127 tgacttttttaaaaaagttaatcttaatcttaatgattggttcatttttaaattgtt 25580071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 9e-29; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 37703251 - 37703343
Alignment:
Q  111 tttatttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||||||||||||| |||| ||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  37703251 tttatttagggagcttctatggtgcagtcagtaaattgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgtt 37703343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 24212142 - 24212058
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  24212142 gagagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 24212058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 35353516 - 35353424
Alignment:
Q  111 tttatttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| | ||||||||| |||||| |||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  35353516 tttattttgggagcttctaaggtgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgtt 35353424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 9355585 - 9355671
Alignment:
Q  117 tagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||||||||||||||  ||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  9355585 tagaaagcttctatggtgcaggcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 9355671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 18797725 - 18797643
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||| |||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  18797725 gagcttttatgatgcagtcagaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 18797643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 29173920 - 29173838
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  29173920 gagcttctacgatgcagtcagaaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 29173838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 31520504 - 31520586
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| | || ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  31520504 gagcttctatggtgcagttaggaaactgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 31520586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 38258977 - 38258895
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  38258977 gagcttctacggtgcagtcagaaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 38258895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 23111589 - 23111508
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| ||| || |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  23111589 agcttctacggtacagtcagaaaactgacttttttaaaaaagttaactttgatcttaatgtttgattcatttttaaattgtt 23111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 7335191 - 7335112
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||||||||||||||| |||| ||| ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  7335191 gagcttctatggtgcagtcaggaaattgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaatt 7335112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 31578826 - 31578906
Alignment:
Q  120 agagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    |||| |||||||||||| |||| ||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||||||    
T  31578826 agagtttctatggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttattgtttgattcatttttaaatt 31578906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 10481996 - 10481921
Alignment:
Q  128 tatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||| ||| ||||||||||||||    
T  10481996 tatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatatttaatttatttttaaattgtt 10481921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 4583317 - 4583235
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||||||  ||||||| ||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  4583317 gagcttctacggtgcagccagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgtt 4583235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 6546917 - 6546835
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  6546917 gagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 6546835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 17842347 - 17842429
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  17842347 gagcttctacggtgcagtcaagaaattgacttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgtt 17842429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 21992025 - 21991943
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||| |||||  ||||||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||    
T  21992025 gagcttctacggtgtaatcatgaaactgacttttttgaaaaggttaattttaatcttaatgtttgattcatttttaaattgtt 21991943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 26587855 - 26587937
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| || |||||||  ||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||    
T  26587855 gagcttctacggcgcaatcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaattgtt 26587937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 26980704 - 26980622
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  26980704 gagcttctaaggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 26980622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 32432850 - 32432768
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||  ||||||||  ||| |||||||||||||||||||||||||||||||    
T  32432850 gagcttctacggtgcagtcaggaaactgacttttttaaaaaagttacttttaatcttaatgtttgattcatttttaaattgtt 32432768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 12390412 - 12390493
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgt 202  Q
    ||||||||| |||| | |||| ||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  12390412 gagcttctacggtgaagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttatttcatttttaaattgt 12390493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 44411304 - 44411385
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| ||||||||| |||| ||||| ||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||    
T  44411304 agcttatatggtgcagtcaggaaactaacttttttggaaaggttaattatgatcttaatgtttcattcatttttaaattgtt 44411385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 37347397 - 37347337
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  37347397 aaactgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 37347337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 10358977 - 10359059
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| | |  ||||| ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  10358977 gagcttctacggtgcagttaagaaactaacttttttgaaaaagttaattttgatcataatgtttgattcatttttaaattgtt 10359059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 15612522 - 15612604
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  15612522 gagcttctacggtgcagtcatgaaactgactttttttaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 15612604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 37110272 - 37110190
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||| ||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  37110272 gagcttctacggtgcagtcaagaaattgatttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgtt 37110190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 8861661 - 8861601
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  8861661 aaactgacttttttgaaaaagttaattttaatcttagtgtttgattcatttttaaattgtt 8861601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 30055925 - 30055843
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||| |||||||||||  |||||||| |||||| |||| | |||||||||||||||||||||    
T  30055925 gagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgtt 30055843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 37704580 - 37704498
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||||||||| |||| ||| ||||||||||||||||  |||  ||||| |||||||||||||||||| |||||||||    
T  37704580 gagcttttatggtgcagtcaggaaattgacttttttggaaaaactaatcttgattttaatgtttgattcatttgtaaattgtt 37704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 46480909 - 46480974
Alignment:
Q  138 tcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||||| ||| ||||||||||||||    
T  46480909 tcaggaaactgacttttttgaaaaagttaattatgatcttaatgttttatttatttttaaattgtt 46480974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 15672532 - 15672604
Alignment:
Q  131 ggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||| ||||||||||||||| |||| |||| ||| | |||||||||| ||||||||||||||||||    
T  15672532 ggtgcagtcaggaaactgacttttttgaaaaaattaattttaaccttaatgtttaattcatttttaaattgtt 15672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 32820854 - 32820898
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  32820854 aaaagttaattttgatcttaatgtttgattcatttttaaattgtt 32820898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 48928060 - 48928142
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| | |||||| ||||||||||  |||| |||| |||||||| |||||| |||| ||||||||||||||    
T  48928060 gagcttctacggtgcagttagaaaattgacttttttaaaaaaattaattttgatctaaatgttcgatttatttttaaattgtt 48928142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 22687599 - 22687547
Alignment:
Q  151 ttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  22687599 ttttttgaaaaagttaattttaatcttaatgtatgattcatttttaaattgtt 22687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 41764867 - 41764923
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||| ||||| ||||||||||||||| | |||||||||||||||||    
T  41764867 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgtt 41764923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 43925455 - 43925411
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||    
T  43925455 aaaagttaattttaatcttaatgtttgattcatttttaaattgtt 43925411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 23610245 - 23610169
Alignment:
Q  23 tctcatatttttagttgagaaatacgatgaacaaatcagttgatttttcattttgagatttcttgctcaatacttgta 100  Q
    ||||||||| |||||||||||||| ||| ||  ||||| ||| |||| |||||||||| ||||| |||||||||||||    
T  23610245 tctcatattcttagttgagaaatatgataaaataatcacttggtttt-cattttgagaattcttactcaatacttgta 23610169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 27284144 - 27284063
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaag-ttaaatttgatcttaatgtttga-ttcatttttaaatt 200  Q
    ||||||||| |||||| |||| ||| |||||||||| |||||| |||| |||||| ||||||||||| || |||||||||||    
T  27284144 gagcttctacggtgcagtcaggaaattgactttttttgaaaagattaattttgattttaatgtttgattttatttttaaatt 27284063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 25691345 - 25691389
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||    
T  25691345 aaaatttaattttaatcttaatgtttgattcatttttaaattgtt 25691389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 32592996 - 32593051
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| ||||||||| |||||||||||||||  ||||| ||||||||||||    
T  32592996 tgacttttttgaaaaagttaattttgatcttaatgttcaattca-ttttaaattgtt 32593051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 12166265 - 12166215
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcattt 193  Q
    |||||||||||| |  ||||||||| ||| |||||||||||||||||||||    
T  12166265 aaactgacttttctaaaaaagttaattttaatcttaatgtttgattcattt 12166215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 11071551 - 11071519
Alignment:
Q  171 tgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||||||||||||||||||||||    
T  11071551 tgattttaatgtttgattcatttttaaattgtt 11071519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 34361967 - 34362023
Alignment:
Q  149 acttttttggaaaagttaaatttga-tctt-aatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||||||||| ||| | |||| ||||||||||||||||||||||||||    
T  34361967 acttttttgaaaaagttaattttaaatctttaatgtttgattcatttttaaattgtt 34362023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 19289093 - 19289185
Alignment:
Q  111 tttatttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| | |||||||||||||||| | || ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  19289093 tttattttgggagcttctatggtgcagttaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgtt 19289185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 29241925 - 29242007
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||||||| |||| |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  29241925 gagcttctatggtgcagtcaggaaactgaactttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgtt 29242007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 45328112 - 45328031
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  45328112 gagcttctacggtgcagtcagaaa-ctgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 45328031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 39167150 - 39167231
Alignment:
Q  122 agcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  39167150 agcttctactgtgcaatcagaaaactgacttttttgaaaaagttaattttaatcttaatgttttattcatttttaaattgtt 39167231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 4167345 - 4167263
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  4167345 gagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgtt 4167263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 31862275 - 31862197
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    |||||||||||||||| || | ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  31862275 gagcttctatggtgcagtcgggaaactgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaat 31862197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 35959315 - 35959233
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| ||| |||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  35959315 gagcttctacggtgcactcaaaaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 35959233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 41961263 - 41961181
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  41961263 gagcttctacggtgcagtcaggaaactgaattttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 41961181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 43648025 - 43648107
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  43648025 gagcttctacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 43648107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 44914092 - 44914008
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||| |||||| |||| ||||||  ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  44914092 gagagcttctacggtgcagtcagcaaactggtttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 44914008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 33902438 - 33902355
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaa-gttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||||||||||||||||| ||||||||  |||| ||||| |||||||||||||||||||| ||||||||||||||    
T  33902438 gagcttctacggtgcaatcagaaaactaactttttttaaaaaagttaattttgatcttaatgtttgatttatttttaaattgtt 33902355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 41465917 - 41465842
Alignment:
Q  128 tatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||    
T  41465917 tatggtgcagttagaaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcaattttaaattgtt 41465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 2325158 - 2325240
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||| ||| ||||||  ||||||||| |||||||||||||||||||| ||||||||||||||    
T  2325158 gagcttctacggtgcagtcagaaaattgattttttttaaaaagttaattttgatcttaatgtttgatttatttttaaattgtt 2325240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 19424422 - 19424504
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  19424422 gagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgtt 19424504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 18494083 - 18494143
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  18494083 aaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 18494143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 43770650 - 43770710
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  43770650 aaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 43770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 11366160 - 11366242
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| |||||| |||||||| ||| ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  11366160 gagcatctacggtgcagtcagaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 11366242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 33660157 - 33660239
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  |||||||||||| || ||||||||| ||| || ||||||||||||||||||||||||||||    
T  33660157 gagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 33660239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 7006723 - 7006800
Alignment:
Q  126 tctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||||  ||| ||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  7006723 tctacggtgcaatcatgaaaatgacttttttgaaaaagttaattttaatcataatgtttgattcatttttaaattgtt 7006800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 26357981 - 26357918
Alignment:
Q  140 agaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| ||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  26357981 agaaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 26357918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 3177362 - 3177280
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||  ||| || ||||||||||||| ||||| ||||||||    
T  3177362 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttacttttaattttaatgtttgatttattttcaaattgtt 3177280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 33550755 - 33550845
Alignment:
Q  114 atttagagagcttctatggtgcaatcagaaaactgacttttt-tggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||||||  ||||  |||||||||||| |||||    ||||||||| |||||||||||||||||||||||||||||||||||    
T  33550755 atttagggagcttctacagtgctgtcagaaaactgaatttttaaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 33550845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 5881930 - 5881870
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||| |||| || ||||||||| ||| |||||||||||||||||||||||||||||||    
T  5881930 aaactgatttttatgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 5881870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 33709015 - 33709094
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||| |||  | ||||| ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  33709015 cttctacggtgcagtcatgatactgaattttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 33709094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 4764055 - 4763975
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttt-tggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| |||||| | || |||||||||||||    ||||||||| |||||| |||||||||||||||||||||||||    
T  4764055 gagcttctacggtgcagtaaggaaactgactttttaaaaaaaagttaattttgattttaatgtttgattcatttttaaatt 4763975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 37906115 - 37906051
Alignment:
Q  140 agaaaactgacttttttggaaaagttaaatttgatcttaatgtttga-ttcatttttaaattgtt 203  Q
    |||||| ||||||||||| |||| |||| |||||| ||||||||||| |||||||||||||||||    
T  37906115 agaaaattgacttttttgaaaaaattaattttgattttaatgtttgatttcatttttaaattgtt 37906051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 19500700 - 19500777
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||| ||| |||| | ||||||||| |||| | || |||||||||||| ||||||||||||||||||||||    
T  19500700 cttctatggtgcagtcaaaaaatt-acttttttgaaaaaat-aattttgatcttaatatttgattcatttttaaattgtt 19500777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 17071550 - 17071634
Alignment:
Q  121 gagcttctatggtgcaatcagaaaa-ctgacttttttggaa-aagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||| |||||||||||  || ||   ||| ||||||||||||||||||||||||||| ||||||    
T  17071550 gagcttctacggtgcagtcagaaaaactgacttttttaaaataaaaaaaaattgatcttaatgtttgattcatttttacattgtt 17071634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 31570512 - 31570592
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaat 199  Q
    |||||||||||   |||| |||  ||||||||||||||  ||||||||| ||| || |||||| |||||||||||||||||    
T  31570512 gagagcttctacactgcagtcatgaaactgactttttttaaaaagttaattttcattttaatgattgattcatttttaaat 31570592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 17053910 - 17053993
Alignment:
Q  121 gagcttctatggtgcaatcagaaaa-ctgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||| ||||||||||   | ||   ||| ||||||||||||||||||||||||||| ||||||    
T  17053910 gagcttctacggtgcagtcagaaaaactgactttttaaaataaaaaaaaattgatcttaatgtttgattcatttttacattgtt 17053993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 41463408 - 41463449
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||    
T  41463408 aaaagttaattttaatcttaatgattgattcatttttaaatt 41463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 6178159 - 6178111
Alignment:
Q  118 agagagcttctatggtgcaatcagaaaactgacttttttggaaaagtta 166  Q
    |||| ||||||| |||||| ||| ||||||||||||||| |||||||||    
T  6178159 agagggcttctacggtgcagtcaaaaaactgacttttttagaaaagtta 6178111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 3e-25; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 6090943 - 6091025
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  6090943 gagcttctacggtgcagtcagaaaacttacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgtt 6091025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 1946259 - 1946176
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaa-gttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||    
T  1946259 gagcttctacggtgcagtcaggaaactgacttttttgaaaaaagttaattttgattttaatgtttgattcatttttaaattgtt 1946176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 3879703 - 3879782
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||| |||| ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  3879703 cttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtt 3879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 7054531 - 7054615
Alignment:
Q  119 gagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||| || |||||| |||  ||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||    
T  7054531 gagagcttttacggtgcagtcaagaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatctttaaattgtt 7054615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 33892776 - 33892855
Alignment:
Q  124 cttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| |||||||| |  ||||||||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||    
T  33892776 cttctacggtgcaattatgaaactgacttttttgaaaaagttaattttaaccttaatgtttgattcatttttaaattgtt 33892855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 20768505 - 20768423
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||| ||| ||||||| ||||||||| |||||||||||||||  ||||||||||||||||||    
T  20768505 gagcttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgatcttaatgttcaattcatttttaaattgtt 20768423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 8513622 - 8513562
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  8513622 aaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt 8513562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 5627820 - 5627733
Alignment:
Q  116 ttagagagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| ||||||||| |||||| |||| ||||||| ||||||  |||| |||| |||||| ||||| ||||||||||||||||||||||    
T  5627820 ttagggagcttctacggtgcagtcaggaaactgatttttttaaaaaaattaattttgattttaatatttgattcatttttaaattgtt 5627733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 7234793 - 7234875
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||| || |||| | |||| ||| ||| ||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  7234793 gagcttttacggtgtagtcaggaaaatgatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgtt 7234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 29182562 - 29182502
Alignment:
Q  143 aaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| ||||||||| ||||||||| |||  |||||||| |||||||||||||||||||||    
T  29182562 aaactaacttttttgaaaaagttaattttagtcttaatgattgattcatttttaaattgtt 29182502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 33619230 - 33619174
Alignment:
Q  147 tgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||||  ||||||||| ||| ||||||||||| |||||||||||||||||||    
T  33619230 tgactttttttaaaaagttaattttaatcttaatgttcgattcatttttaaattgtt 33619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 33724062 - 33724102
Alignment:
Q  163 gttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  33724062 gttaattttgatcttaatgtttgattcatttttaaattgtt 33724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 6089286 - 6089237
Alignment:
Q  154 tttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||| |||| |||| ||| || ||||||||||||||||||||||||||||    
T  6089286 tttgaaaaaattaattttaattttaatgtttgattcatttttaaattgtt 6089237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 21016917 - 21016961
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||||    
T  21016917 aaaagttaattttaatcttaatatttgattcatttataaattgtt 21016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 267695 - 267617
Alignment:
Q  125 ttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    |||||||||||| |||  ||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||    
T  267695 ttctatggtgcagtcaagaaactgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaattgtt 267617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 145777 - 145856
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaatt 200  Q
    ||||||||| |||||| |||| ||| ||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||    
T  145777 gagcttctacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttaattcatttttaaatt 145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 8310 - 8228
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||| ||| |||||||||||  |||||||| |||||| |||| | |||||||||||||||||||||    
T  8310 gagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgtt 8228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 44379 - 44297
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||| |||  ||||||||||||||| ||||||| | |||||| ||||||||| ||||||||||||||||||    
T  44379 gagcttctacgatgcagtcaacaaactgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgtt 44297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 154408 - 154490
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| | |||| |||  ||||||||||||||| ||||||| | |||||| ||||||||| ||||||||||||||||||    
T  154408 gagcttctacgatgcagtcaacaaactgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgtt 154490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 12331 - 12250
Alignment:
Q  121 gagcttctatggtgcaatcagaaaactgacttttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| |||  ||||| ||||||||  ||||||||| ||| |||||||||||||||| ||||||||||||||    
T  12331 gagcttctacggtgcagtcatgaaacttacttttttaaaaaagttaattttaatcttaatgtttgatt-atttttaaattgtt 12250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 513 - 469
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||    
T  513 aaaagttaattttaatcttaatgtttgattcatttttaaattgtt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 408223 - 408273
Alignment:
Q  153 ttttggaaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||| |||| |||| ||| || ||||||||||||||||||||||||||||    
T  408223 ttttgaaaaaattaatttttattttaatgtttgattcatttttaaattgtt 408273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 93901 - 93944
Alignment:
Q  159 aaaagttaaatttgatcttaatgtttgattcatttttaaattgtt 203  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||    
T  93901 aaaagttaattttgattttaatgtttgattca-ttttaaattgtt 93944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University