View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19971_low_28 (Length: 355)

Name: NF19971_low_28
Description: NF19971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19971_low_28
NF19971_low_28
[»] chr7 (45 HSPs)
chr7 (11-355)||(41764630-41764970)
chr7 (252-355)||(35353377-35353480)
chr7 (245-355)||(18797596-18797706)
chr7 (223-355)||(48928057-48928189)
chr7 (224-355)||(29173791-29173922)
chr7 (248-355)||(7335062-7335169)
chr7 (248-355)||(37703283-37703390)
chr7 (252-353)||(6546790-6546891)
chr7 (219-355)||(24212010-24212147)
chr7 (254-355)||(44411331-44411432)
chr7 (252-355)||(9355615-9355718)
chr7 (248-355)||(17842369-17842476)
chr7 (252-355)||(26587881-26587984)
chr7 (248-355)||(30055796-30055903)
chr7 (248-355)||(37110143-37110250)
chr7 (241-355)||(31520519-31520633)
chr7 (252-355)||(8861554-8861657)
chr7 (252-355)||(15612548-15612651)
chr7 (256-355)||(22687500-22687599)
chr7 (252-355)||(31578853-31578956)
chr7 (252-355)||(37347290-37347393)
chr7 (252-355)||(46480918-46481021)
chr7 (245-355)||(4583188-4583298)
chr7 (245-351)||(23111465-23111571)
chr7 (254-355)||(10359005-10359106)
chr7 (223-355)||(12390409-12390541)
chr7 (256-355)||(25691337-25691436)
chr7 (252-355)||(26980575-26980678)
chr7 (252-347)||(32592996-32593090)
chr7 (256-355)||(32820846-32820945)
chr7 (245-355)||(10481874-10481984)
chr7 (248-355)||(27284013-27284122)
chr7 (223-336)||(38258867-38258980)
chr7 (252-355)||(32432721-32432824)
chr7 (260-355)||(43925364-43925459)
chr7 (223-355)||(5657240-5657373)
chr7 (252-355)||(15672548-15672651)
chr7 (248-355)||(37704451-37704558)
chr7 (269-355)||(11071472-11071558)
chr7 (293-355)||(12166012-12166074)
chr7 (252-312)||(21991939-21991999)
chr7 (254-355)||(34361967-34362070)
chr7 (11-80)||(41756688-41756757)
chr7 (318-355)||(33688117-33688154)
chr7 (222-298)||(12166215-12166291)
[»] chr2 (39 HSPs)
chr2 (224-355)||(26357871-26358002)
chr2 (241-355)||(41465795-41465909)
chr2 (247-355)||(35959186-35959294)
chr2 (241-355)||(19289118-19289232)
chr2 (248-353)||(43648047-43648152)
chr2 (219-355)||(19424415-19424551)
chr2 (224-355)||(2325156-2325287)
chr2 (223-355)||(41961134-41961266)
chr2 (224-355)||(4167216-4167347)
chr2 (252-355)||(7006744-7006847)
chr2 (245-355)||(11366179-11366290)
chr2 (252-351)||(18494087-18494186)
chr2 (252-355)||(33660183-33660286)
chr2 (252-355)||(43770654-43770757)
chr2 (252-348)||(31862153-31862249)
chr2 (256-355)||(5881823-5881922)
chr2 (256-355)||(33709042-33709141)
chr2 (270-355)||(19500739-19500824)
chr2 (244-355)||(37906004-37906116)
chr2 (257-347)||(29241956-29242046)
chr2 (245-355)||(39167168-39167278)
chr2 (263-355)||(4763925-4764017)
chr2 (226-355)||(31570514-31570643)
chr2 (292-355)||(27349794-27349857)
chr2 (241-355)||(13711753-13711867)
chr2 (256-346)||(33902317-33902407)
chr2 (256-355)||(44913958-44914060)
chr2 (252-352)||(3177236-3177336)
chr2 (296-355)||(4263926-4263985)
chr2 (252-355)||(18257344-18257447)
chr2 (263-355)||(33550800-33550896)
chr2 (252-311)||(45328028-45328087)
chr2 (297-355)||(4478659-4478717)
chr2 (258-351)||(41051112-41051205)
chr2 (256-348)||(41463400-41463492)
chr2 (314-355)||(19314141-19314182)
chr2 (275-320)||(17053960-17054005)
chr2 (275-320)||(17071601-17071646)
chr2 (314-355)||(44286243-44286284)
[»] chr4 (49 HSPs)
chr4 (224-348)||(28002772-28002896)
chr4 (252-355)||(33816330-33816433)
chr4 (245-355)||(25184407-25184517)
chr4 (241-355)||(32579740-32579854)
chr4 (223-355)||(6864329-6864461)
chr4 (215-355)||(30002418-30002558)
chr4 (248-355)||(3042913-3043020)
chr4 (252-355)||(39400302-39400405)
chr4 (252-355)||(7703803-7703906)
chr4 (252-355)||(23761365-23761468)
chr4 (252-355)||(35025381-35025483)
chr4 (248-355)||(37775952-37776059)
chr4 (252-355)||(47254034-47254137)
chr4 (245-355)||(879355-879465)
chr4 (222-355)||(19089237-19089370)
chr4 (222-355)||(19440432-19440565)
chr4 (254-355)||(50765014-50765115)
chr4 (248-355)||(26896381-26896489)
chr4 (252-355)||(34361305-34361409)
chr4 (248-355)||(29584010-29584117)
chr4 (248-355)||(36493499-36493606)
chr4 (256-343)||(38012568-38012655)
chr4 (245-355)||(1815595-1815704)
chr4 (245-355)||(7152011-7152121)
chr4 (241-355)||(25700859-25700973)
chr4 (247-351)||(32592382-32592486)
chr4 (252-352)||(46887972-46888072)
chr4 (252-355)||(4598276-4598379)
chr4 (248-355)||(17272258-17272365)
chr4 (252-351)||(33341696-33341795)
chr4 (248-355)||(37663551-37663658)
chr4 (252-351)||(49376265-49376364)
chr4 (252-355)||(32912393-32912497)
chr4 (252-355)||(23431849-23431952)
chr4 (256-355)||(46883932-46884031)
chr4 (252-351)||(50697540-50697639)
chr4 (224-355)||(35020817-35020952)
chr4 (269-355)||(55477722-55477808)
chr4 (252-355)||(37288022-37288126)
chr4 (268-355)||(34947925-34948012)
chr4 (252-355)||(55240919-55241022)
chr4 (253-355)||(5047781-5047883)
chr4 (263-355)||(27396910-27397000)
chr4 (252-355)||(9139523-9139624)
chr4 (252-355)||(4205278-4205381)
chr4 (252-355)||(17168007-17168110)
chr4 (252-355)||(17173584-17173687)
chr4 (252-355)||(4934026-4934130)
chr4 (248-355)||(42200024-42200131)
[»] chr6 (15 HSPs)
chr6 (220-355)||(20768376-20768511)
chr6 (224-355)||(6090941-6091072)
chr6 (248-355)||(33619124-33619234)
chr6 (256-355)||(3879730-3879829)
chr6 (216-355)||(7234783-7234925)
chr6 (252-355)||(33892799-33892902)
chr6 (252-352)||(1946131-1946233)
chr6 (252-355)||(7054559-7054663)
chr6 (269-355)||(4318626-4318712)
chr6 (252-355)||(8513522-8513618)
chr6 (256-355)||(5627685-5627785)
chr6 (263-355)||(21016916-21017008)
chr6 (254-355)||(29182458-29182556)
chr6 (259-355)||(6089197-6089286)
chr6 (268-323)||(33724062-33724117)
[»] chr1 (54 HSPs)
chr1 (252-355)||(14758322-14758425)
chr1 (241-355)||(15168386-15168500)
chr1 (245-355)||(10923017-10923127)
chr1 (224-355)||(32216345-32216476)
chr1 (222-355)||(19899521-19899655)
chr1 (256-355)||(2960038-2960137)
chr1 (256-355)||(11742155-11742254)
chr1 (248-355)||(28564562-28564669)
chr1 (248-355)||(32267324-32267431)
chr1 (248-355)||(37451575-37451682)
chr1 (221-355)||(46931699-46931834)
chr1 (256-355)||(48353832-48353931)
chr1 (222-355)||(34012135-34012268)
chr1 (248-355)||(15383223-15383331)
chr1 (252-355)||(31621331-31621435)
chr1 (252-355)||(1547561-1547664)
chr1 (245-355)||(8222418-8222528)
chr1 (251-354)||(9902836-9902939)
chr1 (252-355)||(38823504-38823607)
chr1 (241-355)||(21289890-21290004)
chr1 (254-355)||(10181792-10181893)
chr1 (248-355)||(23999637-23999745)
chr1 (219-355)||(27532732-27532867)
chr1 (248-355)||(27763089-27763197)
chr1 (256-355)||(3535213-3535312)
chr1 (256-355)||(27563692-27563791)
chr1 (252-355)||(30254713-30254816)
chr1 (248-355)||(39393674-39393781)
chr1 (216-346)||(15752328-15752458)
chr1 (269-355)||(16415936-16416022)
chr1 (248-355)||(51129149-51129254)
chr1 (256-355)||(4330571-4330670)
chr1 (256-355)||(7078850-7078949)
chr1 (256-355)||(47279479-47279578)
chr1 (221-355)||(22171001-22171135)
chr1 (257-355)||(27227273-27227371)
chr1 (263-355)||(25160922-25161015)
chr1 (243-355)||(40885103-40885216)
chr1 (256-355)||(238300-238399)
chr1 (261-355)||(3309443-3309538)
chr1 (252-355)||(27266984-27267086)
chr1 (248-355)||(28769943-28770050)
chr1 (252-355)||(47682277-47682380)
chr1 (274-355)||(1359740-1359821)
chr1 (252-355)||(31962906-31963010)
chr1 (256-335)||(33725398-33725478)
chr1 (292-355)||(30326775-30326838)
chr1 (245-347)||(42721334-42721435)
chr1 (297-355)||(37618729-37618787)
chr1 (269-352)||(41926449-41926532)
chr1 (252-312)||(48620922-48620982)
chr1 (310-355)||(18422941-18422986)
chr1 (252-288)||(38759847-38759883)
chr1 (16-79)||(26973807-26973870)
[»] chr8 (40 HSPs)
chr8 (241-355)||(35459494-35459608)
chr8 (252-355)||(35859227-35859330)
chr8 (245-355)||(43643382-43643492)
chr8 (224-355)||(33906505-33906634)
chr8 (252-355)||(7890751-7890854)
chr8 (252-355)||(16446669-16446772)
chr8 (256-355)||(23854229-23854328)
chr8 (224-355)||(34895255-34895386)
chr8 (252-355)||(37970313-37970416)
chr8 (241-355)||(12587875-12587989)
chr8 (248-355)||(1149422-1149529)
chr8 (256-355)||(466125-466224)
chr8 (252-355)||(5299740-5299843)
chr8 (252-355)||(38644271-38644374)
chr8 (252-355)||(44869790-44869893)
chr8 (223-355)||(1205220-1205352)
chr8 (248-355)||(8803606-8803714)
chr8 (248-355)||(18259372-18259479)
chr8 (248-355)||(33198095-33198202)
chr8 (269-355)||(16223156-16223242)
chr8 (248-355)||(11727317-11727425)
chr8 (252-348)||(31933680-31933776)
chr8 (256-355)||(1953786-1953885)
chr8 (252-355)||(4132480-4132583)
chr8 (256-355)||(27082636-27082735)
chr8 (252-355)||(34951851-34951954)
chr8 (252-347)||(41362723-41362818)
chr8 (258-355)||(24823194-24823291)
chr8 (276-355)||(6098331-6098410)
chr8 (248-355)||(40862712-40862820)
chr8 (294-355)||(1149756-1149817)
chr8 (245-355)||(10554991-10555101)
chr8 (224-348)||(43025974-43026099)
chr8 (256-355)||(30654381-30654480)
chr8 (256-355)||(39098917-39099016)
chr8 (256-355)||(36694764-36694863)
chr8 (252-349)||(12876409-12876506)
chr8 (292-355)||(9864441-9864504)
chr8 (241-286)||(9864533-9864578)
chr8 (248-288)||(13307939-13307979)
[»] chr5 (51 HSPs)
chr5 (241-355)||(33908527-33908640)
chr5 (252-355)||(24886381-24886484)
chr5 (245-352)||(2888216-2888323)
chr5 (248-355)||(31705386-31705493)
chr5 (252-355)||(39573105-39573208)
chr5 (248-350)||(43254154-43254256)
chr5 (252-355)||(12910649-12910752)
chr5 (252-355)||(15992318-15992421)
chr5 (248-355)||(17157805-17157912)
chr5 (252-355)||(31786424-31786527)
chr5 (256-355)||(38528019-38528118)
chr5 (245-355)||(22973853-22973963)
chr5 (242-355)||(35826254-35826367)
chr5 (252-355)||(699444-699547)
chr5 (252-355)||(19120153-19120256)
chr5 (252-351)||(22019921-22020020)
chr5 (252-355)||(22255476-22255579)
chr5 (252-355)||(22981087-22981190)
chr5 (256-355)||(25669870-25669969)
chr5 (248-355)||(27330598-27330705)
chr5 (252-355)||(28416329-28416432)
chr5 (248-355)||(35504659-35504766)
chr5 (252-355)||(35511260-35511363)
chr5 (224-355)||(40133679-40133810)
chr5 (252-355)||(42343015-42343118)
chr5 (253-355)||(8741664-8741766)
chr5 (241-355)||(43308427-43308541)
chr5 (245-355)||(5830186-5830296)
chr5 (252-355)||(5837849-5837952)
chr5 (252-355)||(7208642-7208745)
chr5 (252-351)||(25889668-25889767)
chr5 (252-355)||(32563434-32563537)
chr5 (252-348)||(8437266-8437362)
chr5 (252-355)||(7693515-7693618)
chr5 (256-355)||(14409123-14409222)
chr5 (256-355)||(35934190-35934289)
chr5 (224-355)||(36867056-36867187)
chr5 (245-355)||(36860718-36860828)
chr5 (256-355)||(9200518-9200617)
chr5 (252-351)||(26269107-26269206)
chr5 (245-355)||(27318259-27318370)
chr5 (252-330)||(23116008-23116086)
chr5 (256-355)||(8467020-8467119)
chr5 (256-351)||(15724786-15724881)
chr5 (256-355)||(25500708-25500807)
chr5 (214-355)||(13956104-13956243)
chr5 (256-354)||(30969106-30969204)
chr5 (252-329)||(14919317-14919394)
chr5 (214-348)||(23954542-23954669)
chr5 (298-355)||(1428983-1429043)
chr5 (241-351)||(21088535-21088643)
[»] chr3 (55 HSPs)
chr3 (245-355)||(43975673-43975783)
chr3 (241-355)||(48355226-48355340)
chr3 (258-355)||(22451253-22451350)
chr3 (252-355)||(4015744-4015847)
chr3 (252-355)||(11357169-11357272)
chr3 (252-355)||(40552047-40552150)
chr3 (247-355)||(46297545-46297653)
chr3 (252-355)||(1089978-1090081)
chr3 (248-355)||(3362540-3362647)
chr3 (248-355)||(25580024-25580131)
chr3 (224-355)||(26941020-26941151)
chr3 (252-355)||(33698438-33698541)
chr3 (252-355)||(39282937-39283040)
chr3 (248-355)||(47481807-47481915)
chr3 (248-355)||(54506092-54506200)
chr3 (256-355)||(22622510-22622609)
chr3 (256-355)||(29099631-29099730)
chr3 (248-355)||(42505859-42505966)
chr3 (248-355)||(44186301-44186408)
chr3 (256-355)||(53228944-53229043)
chr3 (215-355)||(21009552-21009693)
chr3 (252-353)||(37157995-37158096)
chr3 (252-353)||(37203355-37203456)
chr3 (252-355)||(21193892-21193995)
chr3 (252-355)||(44891782-44891885)
chr3 (252-355)||(52040710-52040813)
chr3 (245-355)||(24707896-24708006)
chr3 (252-341)||(20373051-20373140)
chr3 (223-355)||(33378544-33378676)
chr3 (252-355)||(14586468-14586571)
chr3 (252-355)||(22445853-22445956)
chr3 (252-354)||(36012425-36012528)
chr3 (248-355)||(40936258-40936365)
chr3 (252-355)||(2008217-2008327)
chr3 (248-348)||(27480142-27480242)
chr3 (256-355)||(7327274-7327373)
chr3 (245-355)||(51212558-51212662)
chr3 (254-355)||(4761438-4761539)
chr3 (252-336)||(11356946-11357030)
chr3 (245-355)||(3654980-3655093)
chr3 (293-355)||(46994490-46994552)
chr3 (256-355)||(32373755-32373853)
chr3 (248-355)||(24488745-24488853)
chr3 (259-355)||(50475096-50475199)
chr3 (252-352)||(29164097-29164190)
chr3 (292-355)||(34133220-34133283)
chr3 (292-355)||(38591983-38592046)
chr3 (248-310)||(35844577-35844639)
chr3 (252-312)||(11467138-11467198)
chr3 (309-355)||(54828546-54828592)
chr3 (24-80)||(36806103-36806159)
chr3 (27-81)||(49301577-49301631)
chr3 (226-279)||(13498678-13498731)
chr3 (241-286)||(34133312-34133357)
chr3 (24-80)||(36515067-36515123)
[»] scaffold0291 (1 HSPs)
scaffold0291 (248-355)||(8181-8288)
[»] scaffold0318 (1 HSPs)
scaffold0318 (254-355)||(12203-12303)
[»] scaffold0002 (3 HSPs)
scaffold0002 (258-355)||(408223-408320)
scaffold0002 (260-355)||(422-517)
scaffold0002 (257-355)||(93894-93991)
[»] scaffold0061 (1 HSPs)
scaffold0061 (252-355)||(44250-44353)
[»] scaffold0017 (1 HSPs)
scaffold0017 (252-355)||(154434-154537)
[»] scaffold0022 (1 HSPs)
scaffold0022 (248-355)||(145799-145907)
[»] scaffold0008 (1 HSPs)
scaffold0008 (252-319)||(267606-267673)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 355
Target Start/End: Original strand, 41764630 - 41764970
Alignment:
Q  11 cgaagaatatccctattggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggtaaatctatcactagccnnnnnnncttaaaaa 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||    
T  41764630 cgaaaaatatccctattggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggtaaatctatcactagcatttttttcttaaaaa 41764729  T
Q  111 tcttagtacatgcattctagtctagagtaagtgaacacttcttagcattttcctaaaagatatcatacatacatttattgtagtcaannnnnnn-attct 209  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        |||||    
T  41764730 tcttagtacatgcattctag-----agtaagtgaacacttcttagcattttcttaaaagatatcatacatacatttattgtagtcaattttttttattct 41764824  T
Q  210 atccattaattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttg 309  Q
    ||| ||||||||||||||| ||| ||  ||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41764825 atcaattaattaatgggagtttctacggtggagtcgggaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttg 41764924  T
Q  310 attgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  41764925 attgctgattaatgatcaataataattcatccagtaatgcttgcaa 41764970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 35353480 - 35353377
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  35353480 tgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatgatcaatagtgattcatctagtaatgctt 35353381  T
Q  352 gcaa 355  Q
    ||||    
T  35353380 gcaa 35353377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 18797706 - 18797596
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| |||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  18797706 agaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagt 18797607  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  18797606 aatgcttgcaa 18797596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 223 - 355
Target Start/End: Original strand, 48928057 - 48928189
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||||||||||||||||||||| ||||  ||||||||||||| |||||||| || ||||||||||||||||||| ||||||||    
T  48928057 tgggagcttctacggtgcagttagaaaattgacttttttaaaaaaattaattttgatctaaatgttcgatttatttttaaattgttgattgttgattaat 48928156  T
Q  323 gatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||| ||||||||||||||||| ||||||    
T  48928157 gatcaatagtaattcatctagtaatgtttgcaa 48928189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 29173922 - 29173791
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||| ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||| |||    
T  29173922 gggagcttctacgatgcagtcagaaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 29173823  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||||||||||||||||    
T  29173822 atcaatagtaattcatctagtaatgcttgcaa 29173791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 7335169 - 7335062
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||||||  |||||||||||||||||||| | |||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||    
T  7335169 aaattgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattattgatttctgattaatgattaatagtaattcatctagtaat 7335070  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  7335069 gcttgcaa 7335062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 37703283 - 37703390
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  37703283 aaattgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtaat 37703382  T
Q  348 gcttgcaa 355  Q
    | ||||||    
T  37703383 gtttgcaa 37703390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 6546891 - 6546790
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  6546891 tgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 6546792  T
Q  352 gc 353  Q
    ||    
T  6546791 gc 6546790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 355
Target Start/End: Complemental strand, 24212147 - 24212010
Alignment:
Q  219 ttaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgat 318  Q
    |||||| ||||||| ||  || ||| || ||| ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  24212147 ttaatgagagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgat 24212048  T
Q  319 taatgatcaatatta-attcatctagtaatgcttgcaa 355  Q
    |||||||||||| || ||||||||||||||||||||||    
T  24212047 taatgatcaatagtatattcatctagtaatgcttgcaa 24212010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 44411331 - 44411432
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    ||||||||| ||||||||||| |||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  44411331 acttttttggaaaggttaattatgatcttaatgtttcattcatttttaaattgttgattactgattaatggtcaatattaattcatctagtaatgcttgc 44411430  T
Q  354 aa 355  Q
    ||    
T  44411431 aa 44411432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 9355615 - 9355718
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||    
T  9355615 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagcaattcatctagtaatgctt 9355714  T
Q  352 gcaa 355  Q
    ||||    
T  9355715 gcaa 9355718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 17842369 - 17842476
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||| ||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  17842369 aaattgacttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctaataat 17842468  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  17842469 gcttgcaa 17842476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 26587881 - 26587984
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |    
T  26587881 tgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcct 26587980  T
Q  352 gcaa 355  Q
    ||||    
T  26587981 gcaa 26587984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 30055903 - 30055796
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||| || |||||||||||| |||| | | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  30055903 aaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 30055804  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  30055803 gcttgcaa 30055796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 37110250 - 37110143
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||| ||||||| ||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  37110250 aaattgatttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 37110151  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  37110150 gcttgcaa 37110143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 31520519 - 31520633
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||| ||| | ||||||||||||||| |||||||||    
T  31520519 agttaggaaactgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatgatcaatagtaattcatc 31520618  T
Q  341 tagtaatgcttgcaa 355  Q
     ||||||||||||||    
T  31520619 gagtaatgcttgcaa 31520633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 8861657 - 8861554
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| |||||| |||| | ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |    
T  8861657 tgacttttttgaaaaagttaattttaatcttagtgtttgattcatttttaaattgttgattactgattaatgatcaatagtatttcatctagtaatgcat 8861558  T
Q  352 gcaa 355  Q
    ||||    
T  8861557 gcaa 8861554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 15612548 - 15612651
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| ||||||||| ||||||||| | | ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  15612548 tgactttttttaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatgatcaacaataattcatctagtaatgctt 15612647  T
Q  352 gcaa 355  Q
    ||||    
T  15612648 gcaa 15612651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 22687599 - 22687500
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  22687599 ttttttgaaaaagttaattttaatcttaatgtatgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctattaatgcttgcaa 22687500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 31578853 - 31578956
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| ||| |||| | |||||||||||||| ||||||  |||||||||||||||| ||||||||||||||||||||    
T  31578853 tgacttttttgaaaaagttaattttgattttattgtttgattcatttttaaattattgattattgattaatgatcaatagtaattcatctagtaatgctt 31578952  T
Q  352 gcaa 355  Q
    ||||    
T  31578953 gcaa 31578956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 37347393 - 37347290
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||| ||| | ||||||||||||||| ||||||||| ||||||||||    
T  37347393 tgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatgatcaatagtaattcatcgagtaatgctt 37347294  T
Q  352 gcaa 355  Q
    ||||    
T  37347293 gcaa 37347290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 46480918 - 46481021
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||| |||||||||||||   || |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||    
T  46480918 tgacttttttgaaaaagttaattatgatcttaatgttttatttatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgttt 46481017  T
Q  352 gcaa 355  Q
    ||||    
T  46481018 gcaa 46481021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 4583298 - 4583188
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||||||||||||||||||| ||||||||| |||||||||||   ||||||||||||||||||||  |||||| ||||| |||| ||||||||| |||    
T  4583298 agaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgatgactgattcatgattaatagtaattcatccagt 4583199  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  4583198 aatgcttgcaa 4583188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 23111571 - 23111465
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| |||||||||| |||| ||||| ||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  23111571 agaaaactgacttttttaaaaaagttaactttgatcttaatgtttgattcatttttaaattgttgattactgatttatgatcaatagtaattcttctagt 23111472  T
Q  345 aatgctt 351  Q
    |||||||    
T  23111471 aatgctt 23111465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 10359005 - 10359106
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    ||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||  |||||||||||||||| ||| |||| |||||||||||||    
T  10359005 acttttttgaaaaagttaattttgatcataatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaaatcatttagtaatgcttgc 10359104  T
Q  354 aa 355  Q
    ||    
T  10359105 aa 10359106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 223 - 355
Target Start/End: Original strand, 12390409 - 12390541
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||| || ||||||||||||||| ||| |||||||||||||||||||||   ||||||||||||||||  ||| |||||||||    
T  12390409 tgggagcttctacggtgaagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttatttcatttttaaattgtcaattactgattaat 12390508  T
Q  323 gatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||| |||| ||||||||||||||||| ||||||    
T  12390509 gataaatagtaattcatctagtaatggttgcaa 12390541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 25691337 - 25691436
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| ||||  |||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  25691337 ttttttaaaaaatttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgtttgcaa 25691436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 26980678 - 26980575
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||||||| | ||||||||||||| | |||||||||||||||| |||    
T  26980678 tgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattaccgattaatgatcaacaataattcatctagtaatactt 26980579  T
Q  352 gcaa 355  Q
    ||||    
T  26980578 gcaa 26980575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 347
Target Start/End: Original strand, 32592996 - 32593090
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  32592996 tgacttttttgaaaaagttaattttgatcttaatgttcaattcatttt-aaattgttgattgctgattaatgatccatagtaatttatctagtaat 32593090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 32820846 - 32820945
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||  |||| |||||| |||| ||||||||||||||||||||||||    
T  32820846 tttttttaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgatgaatgattaatagtaattcatctagtaatgcttgcaa 32820945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 10481984 - 10481874
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||   || |||||||||||||| ||| |||||||| |||||||| |||||||||||||    
T  10481984 agaaaactgacttttttgaaaaagttaattttgatcttaatatttaatttatttttaaattgttaattactgattaacgatcaatagtaattcatctagt 10481885  T
Q  345 aatgcttgcaa 355  Q
    ||| |||||||    
T  10481884 aatacttgcaa 10481874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 27284122 - 27284013
Alignment:
Q  248 aaattgactttttt-gaaaaggttaattttgatcttaatgttcggttc-atttttaaattgttgattgctgattaatgatcaatattaattcatctagta 345  Q
    |||||||||||||| |||||| ||||||||||| |||||||| | ||  ||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  27284122 aaattgactttttttgaaaagattaattttgattttaatgtttgattttatttttaaattattgattactgattaatgatcaatagtaattcatctagta 27284023  T
Q  346 atgcttgcaa 355  Q
    ||||||||||    
T  27284022 atgcttgcaa 27284013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 38258980 - 38258867
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||| |||||| ||| ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| |||||||||    
T  38258980 tgggagcttctacggtgcagtcagaaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaat 38258881  T
Q  323 gatcaatattaatt 336  Q
    |||||||| |||||    
T  38258880 gatcaatagtaatt 38258867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 32432824 - 32432721
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| |||| |||| ||||||||||| | |||||||||||||||||||||  ||||| ||||| |||| ||||||||||||||||||||    
T  32432824 tgacttttttaaaaaagttacttttaatcttaatgtttgattcatttttaaattgttgattattgattcatgattaataataattcatctagtaatgctt 32432725  T
Q  352 gcaa 355  Q
    ||||    
T  32432724 gcaa 32432721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 43925459 - 43925364
Alignment:
Q  260 ttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||| ||||||||||| | |||||||||||||||||||||  ||||| ||||| |||| ||||||||||||||||||||||||    
T  43925459 ttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattagtgattcatgattaatagtaattcatctagtaatgcttgcaa 43925364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 355
Target Start/End: Original strand, 5657240 - 5657373
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatctt-aatgttcggttcatttttaaattgttgattgctgattaa 321  Q
    |||||||||| ||| || |||||  ||| |||| |||||||||| ||||||||| ||||| |||| |   |||||||||||||| |||||| || |||||    
T  5657240 tgggagcttctacaatgcagttatgaaactgacatttttgaaaaagttaattttaatctttaatgatttattcatttttaaatttttgattactcattaa 5657339  T
Q  322 tgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| ||||||||||||||||||||||||    
T  5657340 tgatcaatagtaattcatctagtaatgcttgcaa 5657373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 15672548 - 15672651
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  |||||||| | |||||||||   |||||||||||||||||||||  ||||  |||||||||| ||||||||||||||||||||    
T  15672548 tgacttttttgaaaaaattaattttaaccttaatgtttaattcatttttaaattgttgattattgatgcatgatcaatagtaattcatctagtaatgctt 15672647  T
Q  352 gcaa 355  Q
    ||||    
T  15672648 gcaa 15672651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 37704558 - 37704451
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||| |||   |||| ||||| |||||||| | ||||||| ||||||||||||| || |||||||||||||| |||||||||| |||||    
T  37704558 aaattgacttttttggaaaaactaatcttgattttaatgtttgattcatttgtaaattgttgattactaattaatgatcaatagtaattcatctggtaat 37704459  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  37704458 gcttgcaa 37704451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 269 - 355
Target Start/End: Complemental strand, 11071558 - 11071472
Alignment:
Q  269 ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| |||| |||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||    
T  11071558 ttaattatgattttaatgtttgattcatttttaaattgttgattaatgattaatgatcaatagtaattcatctagtaatgtttgcaa 11071472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 12166074 - 12166012
Alignment:
Q  293 tcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  12166074 tcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 12166012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 21991999 - 21991939
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgatt 312  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  21991999 tgacttttttgaaaaggttaattttaatcttaatgtttgattcatttttaaattgttgatt 21991939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 34361967 - 34362070
Alignment:
Q  254 acttttttgaaaaggttaattttga-tctt-aatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||| ||||||||| | |||| |||||| | ||||||||||||||||| ||  ||||||||||||||| | ||||||||||||||||| ||    
T  34361967 acttttttgaaaaagttaattttaaatctttaatgtttgattcatttttaaattgttaatgactgattaatgatcaaaagtaattcatctagtaatgttt 34362066  T
Q  352 gcaa 355  Q
    ||||    
T  34362067 gcaa 34362070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 41756688 - 41756757
Alignment:
Q  11 cgaagaatatccctattggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggta 80  Q
    |||| ||||||||| |||||||||||| | |||||||||||||||||| ||| |||||||||||||||||    
T  41756688 cgaaaaatatcccttttggaaccgaagccttggagctgatcatttcatgctttcttgccatgattgggta 41756757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 33688117 - 33688154
Alignment:
Q  318 ttaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||  |||||||||||||||||||||||    
T  33688117 ttaatgatcaatagcaattcatctagtaatgcttgcaa 33688154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 12166291 - 12166215
Alignment:
Q  222 atgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcattt 298  Q
    ||||||||||| |||||| ||| |  ||| |||||||| | |||| ||||||||| ||||||||||| | |||||||    
T  12166291 atgggagcttctacactgcagtcatgaaactgacttttctaaaaaagttaattttaatcttaatgtttgattcattt 12166215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 26358002 - 26357871
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||| || ||||||||||||||||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||    
T  26358002 gggagcttctacattgcagttagaaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 26357903  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||||||||||||||||    
T  26357902 atcaatagtaattcatctagtaatgcttgcaa 26357871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 41465909 - 41465795
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||     
T  41465909 agttagaaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcaattttaaattgttgattgctgattaatgatcaatagtaattcata 41465810  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||| ||||||    
T  41465809 tagtaatgtttgcaa 41465795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 35959294 - 35959186
Alignment:
Q  247 aaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    |||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  35959294 aaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaa 35959195  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  35959194 tgcttgcaa 35959186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 19289118 - 19289232
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  19289118 agttaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttaatttctgattaatgatcaatagtaattcatc 19289217  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||||||||||    
T  19289218 tagtaatgcttgcaa 19289232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 43648047 - 43648152
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  43648047 aaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 43648146  T
Q  348 gcttgc 353  Q
    | ||||    
T  43648147 gtttgc 43648152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 219 - 355
Target Start/End: Original strand, 19424415 - 19424551
Alignment:
Q  219 ttaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgat 318  Q
    |||||||||||||| ||  || ||| |  ||| ||||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||||||| |||||    
T  19424415 ttaatgggagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgat 19424514  T
Q  319 taatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19424515 taatgatcaatagtaattcatctagtaatgcttgcaa 19424551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 224 - 355
Target Start/End: Original strand, 2325156 - 2325287
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||||||| |||||| |||| ||||||||||||||||||||| | || |||||||||||||||||| |||||||||     
T  2325156 gggagcttctacggtgcagtcagaaaattgattttttttaaaaagttaattttgatcttaatgtttgatttatttttaaattgttgattactgattaata 2325255  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||||||||||||||||    
T  2325256 atcaatagtaattcatctagtaatgcttgcaa 2325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 355
Target Start/End: Complemental strand, 41961266 - 41961134
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||| || ||| ||| ||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||  ||||||||    
T  41961266 tgggagcttctacggtgcagtcaggaaactgaattttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaat 41961167  T
Q  323 gatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||| ||||||||||||||||||||||||    
T  41961166 gatcaatagtaattcatctagtaatgcttgcaa 41961134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 4167347 - 4167216
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||||||||||||||||||| ||||||||| |||||||||||   ||||||||||||||||||||| |||||| |||    
T  4167347 gggagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 4167248  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    || |||| ||||||||| ||||||||||||||    
T  4167247 attaatagtaattcatccagtaatgcttgcaa 4167216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 7006744 - 7006847
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||| ||||||| | ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  7006744 tgacttttttgaaaaagttaattttaatcataatgtttgattcatttttaaattgttgattactgattaatgatcaatagaaattcatctagtaatgctt 7006843  T
Q  352 gcaa 355  Q
    ||||    
T  7006844 gcaa 7006847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 11366179 - 11366290
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctag 343  Q
    |||||||||| ||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  11366179 agaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctag 11366278  T
Q  344 taatgcttgcaa 355  Q
    ||||||||||||    
T  11366279 taatgcttgcaa 11366290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 351
Target Start/End: Original strand, 18494087 - 18494186
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  18494087 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagcaattcatctagtaatgctt 18494186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 33660183 - 33660286
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| |||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33660183 tgacttttctgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 33660282  T
Q  352 gcaa 355  Q
    ||||    
T  33660283 gcaa 33660286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 43770654 - 43770757
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| || ||||||||||||||  |||||||||||||||||||    
T  43770654 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgatttctaattaatgatcaatagaaattcatctagtaatgctt 43770753  T
Q  352 gcaa 355  Q
    ||||    
T  43770754 gcaa 43770757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 31862249 - 31862153
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatg 348  Q
    ||||||||||||||| |||||||||||||||||| || | ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  31862249 tgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaatcgttgattactgattaatgatcaatagtaattcatctagtaatg 31862153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 5881922 - 5881823
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| |||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  5881922 ttttatgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgaataatgatcaatagtaattcatctagtaatgcttgcaa 5881823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 33709042 - 33709141
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| || |||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  33709042 ttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattaatgattaatgatcaatagtaattcatctagtaatgcttgcaa 33709141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 19500739 - 19500824
Alignment:
Q  270 taattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  19500739 taattttgatcttaatatttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 19500824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 37906116 - 37906004
Alignment:
Q  244 tagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggtt-catttttaaattgttgattgctgattaatgatcaatattaattcatcta 342  Q
    |||||||||||||||||||||||  ||||||||||| |||||||| | || ||||||||||||||| ||| ||||||||||||||||| ||||||||| |    
T  37906116 tagaaaattgacttttttgaaaaaattaattttgattttaatgtttgatttcatttttaaattgttaattactgattaatgatcaatagtaattcatcca 37906017  T
Q  343 gtaatgcttgcaa 355  Q
    ||||| |||||||    
T  37906016 gtaattcttgcaa 37906004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 29241956 - 29242046
Alignment:
Q  257 tttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||| ||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29241956 tttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgctgattaatgttcaatagtaattcatctagtaat 29242046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 39167168 - 39167278
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||   ||||||||||||||||||||| |||||| || || |||| |||||||||||||    
T  39167168 agaaaactgacttttttgaaaaagttaattttaatcttaatgttttattcatttttaaattgttgattactgattcataattaatagtaattcatctagt 39167267  T
Q  345 aatgcttgcaa 355  Q
    |||||| ||||    
T  39167268 aatgctagcaa 39167278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 4764017 - 4763925
Alignment:
Q  263 aaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| |||||||||||| |||||||| | |||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  4764017 aaaaagttaattttgattttaatgtttgattcatttttaaattattgattactgattaatgatcaatagtaattcaactagtaatgcttgcaa 4763925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 355
Target Start/End: Original strand, 31570514 - 31570643
Alignment:
Q  226 gagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgat 325  Q
    ||||||| |||||| ||| |  ||| |||||||||| |||| ||||||||| || |||||| | | |||||||||||||  |||||| ||||||||||||    
T  31570514 gagcttctacactgcagtcatgaaactgactttttttaaaaagttaattttcattttaatgattgattcatttttaaatatttgattactgattaatgat 31570613  T
Q  326 caatattaattcatctagtaatgcttgcaa 355  Q
    ||||| |||||||||||| |||||||||||    
T  31570614 caatagtaattcatctagcaatgcttgcaa 31570643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 27349794 - 27349857
Alignment:
Q  292 ttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27349794 ttcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 27349857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 13711867 - 13711753
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    ||||| ||||||| ||||||||||||  |||||||| || | |||| | | ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  13711867 agttataaaattgtcttttttgaaaaaattaattttaatttaaatgattgattcatttttaaatcgttgattactgattaatgatcaatagtaattcatc 13711768  T
Q  341 tagtaatgcttgcaa 355  Q
    ||||| || ||||||    
T  13711767 tagtattgtttgcaa 13711753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 33902407 - 33902317
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    |||||| |||| ||||||||||||||||||||| | || |||||||||||||||||| | ||||||| ||||||| |||||||||||||||    
T  33902407 ttttttaaaaaagttaattttgatcttaatgtttgatttatttttaaattgttgattacagattaataatcaataataattcatctagtaa 33902317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 44914060 - 44913958
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattca---tctagtaatgcttg 352  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||| ||||| |||| |||||||   |||| |||||||||    
T  44914060 ttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaatagtaattcattttctaataatgcttg 44913961  T
Q  353 caa 355  Q
    |||    
T  44913960 caa 44913958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 352
Target Start/End: Complemental strand, 3177336 - 3177236
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||| |||| || |||||||| | || ||||| |||||||||||| || ||| ||||| |||| ||||||||||||||||||||    
T  3177336 tgacttttttgaaaaagttacttttaattttaatgtttgatttattttcaaattgttgattacttattcatgataaatagtaattcatctagtaatgctt 3177237  T
Q  352 g 352  Q
    |    
T  3177236 g 3177236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 4263926 - 4263985
Alignment:
Q  296 tttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  4263926 tttttaaattgttgattactgatcaatgatcaatattatttcatctagtaatgcttgcaa 4263985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 18257344 - 18257447
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| |||||| ||||||||| || |||||  |   |||||||| ||||||| |||| |||||||||||| |||| ||||||||||||||||||||    
T  18257344 tgacttttgtgaaaaagttaattttaatattaataatttattcattttaaaattgtcgattactgattaatgataaataataattcatctagtaatgctt 18257443  T
Q  352 gcaa 355  Q
    ||||    
T  18257444 gcaa 18257447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 33550800 - 33550896
Alignment:
Q  263 aaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctg----attaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| |||    || ||| ||||||| | ||||||||||||||||||||||    
T  33550800 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactggttaataaataatcaatagttattcatctagtaatgcttgcaa 33550896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 45328087 - 45328028
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgat 311  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||    
T  45328087 tgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgat 45328028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 4478717 - 4478659
Alignment:
Q  297 ttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  4478717 ttttaaattgttgattactgattaatgatcaatagcaattcatctagtaatgcttgcaa 4478659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 41051112 - 41051205
Alignment:
Q  258 ttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||  |||||||| || |||||||| | ||||||||| |||||||||||  ||||||||||||||||  ||||||||||| |||||||    
T  41051112 ttttgaaaaaattaattttaattttaatgtttgattcatttttgaattgttgattattgattaatgatcaataacaattcatctagcaatgctt 41051205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 41463400 - 41463492
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatg 348  Q
    |||||| |||| ||||||||| ||||||||| | | |||||||||||||| || |||  |||||||||||||||| ||||| ||||| |||||    
T  41463400 tttttttaaaaagttaattttaatcttaatgattgattcatttttaaattattaattattgattaatgatcaatagtaatttatctattaatg 41463492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 19314182 - 19314141
Alignment:
Q  314 ctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19314182 ctgattaatgatcaatagtaattcatctagtaatgcttgcaa 19314141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 17053960 - 17054005
Alignment:
Q  275 ttgatcttaatgttcggttcatttttaaattgttgattgctgatta 320  Q
    |||||||||||||| | |||||||||| |||||||||| |||||||    
T  17053960 ttgatcttaatgtttgattcatttttacattgttgattactgatta 17054005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 17071601 - 17071646
Alignment:
Q  275 ttgatcttaatgttcggttcatttttaaattgttgattgctgatta 320  Q
    |||||||||||||| | |||||||||| |||||||||| |||||||    
T  17071601 ttgatcttaatgtttgattcatttttacattgttgattactgatta 17071646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 44286284 - 44286243
Alignment:
Q  314 ctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||| |||||||||||  |||||||||||    
T  44286284 ctgattaatgatcaatagtaattcatctaacaatgcttgcaa 44286243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 8e-43; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 224 - 348
Target Start/End: Original strand, 28002772 - 28002896
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| |||||| ||| || ||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28002772 gggagcttctacactgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgttgattaatg 28002871  T
Q  324 atcaatattaattcatctagtaatg 348  Q
    ||||||| |||||||||||||||||    
T  28002872 atcaatagtaattcatctagtaatg 28002896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 33816330 - 33816433
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  33816330 tgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatgatcaatagtaattcatctagtaatgttt 33816429  T
Q  352 gcaa 355  Q
    ||||    
T  33816430 gcaa 33816433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 25184517 - 25184407
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  25184517 agaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtcgattactgattaatgatcaatagtaattcatctagt 25184418  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  25184417 aatgcttgcaa 25184407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 32579854 - 32579740
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||    
T  32579854 agttagaaaactgacttttttgaaaaaattaattttgatcttaatgtttgatttatttttaaattgttgattgctgattaatgatcaatagtaattcatc 32579755  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||| ||||||    
T  32579754 tagtaatgtttgcaa 32579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 223 - 355
Target Start/End: Complemental strand, 6864461 - 6864329
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||| |||||| ||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||  ||||||||    
T  6864461 tgggagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaat 6864362  T
Q  323 gatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||| ||||||||||||||||||||||||    
T  6864361 gatcaatagtaattcatctagtaatgcttgcaa 6864329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 215 - 355
Target Start/End: Original strand, 30002418 - 30002558
Alignment:
Q  215 ttaattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgc 314  Q
    |||||| ||||||||||| ||  || |||||  |||||||||||| |||||| ||||||||| ||||||||||| | ||||||||||||||||| ||| |    
T  30002418 ttaatttatgggagcttctacggtgcagttatgaaattgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtttattac 30002517  T
Q  315 tgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  30002518 tgattaatgatcaatagtaattcatctagtaatgcttgcaa 30002558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 3043020 - 3042913
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  3043020 aaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaataatcaatactaattcatctagtaat 3042921  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  3042920 gcttgcaa 3042913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 39400405 - 39400302
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  39400405 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattgctgattaatgatcaatagtcattcatctagtaatgctt 39400306  T
Q  352 gcaa 355  Q
    ||||    
T  39400305 gcaa 39400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 7703906 - 7703803
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  7703906 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgataaatagtaattcatctagtaatgctt 7703807  T
Q  352 gcaa 355  Q
    ||||    
T  7703806 gcaa 7703803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 23761468 - 23761365
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  23761468 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattattgattactgattaatgatcaataataattcatctagtaatgctt 23761369  T
Q  352 gcaa 355  Q
    ||||    
T  23761368 gcaa 23761365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 35025381 - 35025483
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| |||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35025381 tgacttttatgaaaaagttaattttgat-ttaatgtttgattcatttttaaattgttgattgctgattaatgatcaatagtaattcatctagtaatgctt 35025479  T
Q  352 gcaa 355  Q
    ||||    
T  35025480 gcaa 35025483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 37776059 - 37775952
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  37776059 aaattgacttttttaaaaaagttaatttcaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 37775960  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  37775959 gcttgcaa 37775952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 47254137 - 47254034
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  47254137 tgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 47254038  T
Q  352 gcaa 355  Q
    ||||    
T  47254037 gcaa 47254034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 879355 - 879465
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| |||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||||||||||| |||||||||||||    
T  879355 agaaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattacttattaatgatcaataataattcatctagt 879454  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  879455 aatgcttgcaa 879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 19089237 - 19089370
Alignment:
Q  222 atgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaa 321  Q
    ||||||||||| ||  || ||| || |||||||||||||||| || |||||||||||| |||| | | | ||||||||||||||||||||| ||||||||    
T  19089237 atgggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaa 19089336  T
Q  322 tgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| ||||||||||||||||||||||||    
T  19089337 tgatcaatagtaattcatctagtaatgcttgcaa 19089370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 19440432 - 19440565
Alignment:
Q  222 atgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaa 321  Q
    ||||||||||| ||  || ||| || ||| |||||||||| |||| ||||||||||||||||||||| | || ||||||||||| |||||| ||||||||    
T  19440432 atgggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattaatttttaaattattgattactgattaa 19440531  T
Q  322 tgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| ||||||||||||||||||||||||    
T  19440532 tgatcaatagtaattcatctagtaatgcttgcaa 19440565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 254 - 355
Target Start/End: Complemental strand, 50765115 - 50765014
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    |||||||| |||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  50765115 acttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgc 50765016  T
Q  354 aa 355  Q
    ||    
T  50765015 aa 50765014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 26896489 - 26896381
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    |||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||    
T  26896489 aaattgacttttttaaaaaagttaattttgattttaatgttcgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctagtaa 26896390  T
Q  347 tgcttgcaa 355  Q
    || ||||||    
T  26896389 tgtttgcaa 26896381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 34361305 - 34361409
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaatgct 350  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  34361305 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctagtaatgct 34361404  T
Q  351 tgcaa 355  Q
    |||||    
T  34361405 tgcaa 34361409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 29584010 - 29584117
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||| |||||||| ||||||||| ||||||||||| | ||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||    
T  29584010 aaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattactgattaatgatcaatagtaattcatctagtaat 29584109  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  29584110 gcttgcaa 29584117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 36493499 - 36493606
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||| ||| | ||||||||||||||| ||||||||| ||||||    
T  36493499 aaattgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatgatcaatagtaattcatcgagtaat 36493598  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  36493599 gcttgcaa 36493606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 38012655 - 38012568
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctag 343  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38012655 ttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgttgattgctgattaatgatcaatagtaattcatctag 38012568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 1815704 - 1815595
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    ||||||||||||||||  ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  1815704 agaaaattgactttttaaaaaag-ttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaattgtaattcatctagt 1815606  T
Q  345 aatgcttgcaa 355  Q
    |||| ||||||    
T  1815605 aatgtttgcaa 1815595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 7152011 - 7152121
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||||||||||||| |||| |||| ||||||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||| |    
T  7152011 agaaaactgacttttttgaaaaagttatttttcatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctaat 7152110  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  7152111 aatgcttgcaa 7152121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 25700859 - 25700973
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||  |||  |||||||||||||||| |||||||||    
T  25700859 agttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtacattattgattaatgatcaatagtaattcatc 25700958  T
Q  341 tagtaatgcttgcaa 355  Q
    ||  |||||||||||    
T  25700959 taacaatgcttgcaa 25700973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 247 - 351
Target Start/End: Complemental strand, 32592486 - 32592382
Alignment:
Q  247 aaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    |||||||||||||||||||| ||||||||| ||||||||||| | |||||||||||||||||||||  ||||||| |||||||| |||||||| ||||||    
T  32592486 aaaattgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattattgattaacgatcaatagtaattcatttagtaa 32592387  T
Q  347 tgctt 351  Q
    |||||    
T  32592386 tgctt 32592382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 252 - 352
Target Start/End: Original strand, 46887972 - 46888072
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| ||||| || | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  46887972 tgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgttgattagtgattaatgatcaatagtaattcatctagtaatgctt 46888071  T
Q  352 g 352  Q
    |    
T  46888072 g 46888072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 4598379 - 4598276
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||  |||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  4598379 tgactttttgtaaaatgttaattttaatcttaatgtttgattcatttttaaattgttgattgctgattaatgatcaatagtaattaatctaataatgctt 4598280  T
Q  352 gcaa 355  Q
    ||||    
T  4598279 gcaa 4598276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 17272365 - 17272258
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||| |||||||| ||||||||| ||||||||||| | ||||||||||||| ||| ||| | ||||||||||||||| ||||||||||||||||    
T  17272365 aaattgacttatttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattaccgattaatgatcaatagtaattcatctagtaat 17272266  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  17272265 gcttgcaa 17272258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 33341795 - 33341696
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| ||||  |||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33341795 tgacttttttaaaaaaattaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 33341696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 37663551 - 37663658
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||| | || |||||||||||| |||| | | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  37663551 aaattgacttttttaataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 37663650  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  37663651 gcttgcaa 37663658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 49376364 - 49376265
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||||||||||||   |||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||||    
T  49376364 tgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattcttgattactgattaatgatcaatagtaattcatttagtaatgctt 49376265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 32912393 - 32912497
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaatgct 350  Q
    |||||||||||||||  || |||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  32912393 tgacttttttgaaaaaattcattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctagtaatgct 32912492  T
Q  351 tgcaa 355  Q
    |||||    
T  32912493 tgcaa 32912497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 23431952 - 23431849
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| || |||||||| | | ||||||||||||||||||| || |||||||||||||| ||||||||||| ||||||||    
T  23431952 tgacttttttgaaaaagttaattttaattttaatgtttgatgcatttttaaattgttgattactaattaatgatcaatagtaattcatctactaatgctt 23431853  T
Q  352 gcaa 355  Q
    ||||    
T  23431852 gcaa 23431849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 46883932 - 46884031
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||  |||||||| || |||||||| | || |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  46883932 ttttttgaaaaaattaatttttattttaatgtttgatttatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 46884031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 50697639 - 50697540
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  |||||||| || |||||||| | ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||    
T  50697639 tgacttttttgaaaaaattaatttttattttaatgtttgattcatttttaaattgttgattactaattaatgatcaatagtaattcatctagtaatgctt 50697540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 224 - 355
Target Start/End: Original strand, 35020817 - 35020952
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||| ||||| |||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||    
T  35020817 gggagcttctacggtgtagtcagaaaactgactcttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattaccgattaatg 35020916  T
Q  324 atcaatat----taattcatctagtaatgcttgcaa 355  Q
    ||||||||    ||||||||||||||||| ||||||    
T  35020917 atcaatatatagtaattcatctagtaatgtttgcaa 35020952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 269 - 355
Target Start/End: Original strand, 55477722 - 55477808
Alignment:
Q  269 ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  55477722 ttaattttgatcttaatgtttgattcatttttaaattgttaattactgattaatgattaatagtaattcatctagtaatgcttgcaa 55477808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 37288126 - 37288022
Alignment:
Q  252 tgacttttttgaaaaggttaattttga-tcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgct 350  Q
    ||||||||||||||| ||||||||| | |||||||||| | |||||||||||||| |||||| |||||||||| |||||| ||||||||||| |||||||    
T  37288126 tgacttttttgaaaaagttaattttaaatcttaatgtttgattcatttttaaattattgattactgattaatgctcaatagtaattcatctaataatgct 37288027  T
Q  351 tgcaa 355  Q
    |||||    
T  37288026 tgcaa 37288022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 34947925 - 34948012
Alignment:
Q  268 gttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||    
T  34947925 gttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaacgatcaatagtatttcatctagtaatgcttgcaa 34948012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 55240919 - 55241022
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  |||||||| ||||||||||| | |||||||||||||||||||||  ||||||||||| |||| ||||| ||||||||||| ||    
T  55240919 tgacttttttgaaaaatttaattttaatcttaatgtttgattcatttttaaattgttgattattgattaatgattaatagtaatttatctagtaatgttt 55241018  T
Q  352 gcaa 355  Q
    ||||    
T  55241019 gcaa 55241022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 5047781 - 5047883
Alignment:
Q  253 gacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttg 352  Q
    ||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||||  ||||    
T  5047781 gacttttttgaaaaaattaattttgattttaatgttcgattcatttttaaattgtttattgttgattactgatcaataataatttatctagtaaaacttg 5047880  T
Q  353 caa 355  Q
    |||    
T  5047881 caa 5047883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 27397000 - 27396910
Alignment:
Q  263 aaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| ||||||||| ||||||||||| | ||||||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||||    
T  27397000 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattac--attaatgatcaatagtaattcatctagtaatgcttgcaa 27396910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 9139624 - 9139523
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||| ||||||||||||| | |||||||||||||  | ||||  |||||||||||||||| |||||| |||||||||||||    
T  9139624 tgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaat--tagattattgattaatgatcaatagtaattcgtctagtaatgctt 9139527  T
Q  352 gcaa 355  Q
    ||||    
T  9139526 gcaa 9139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 4205381 - 4205278
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||| |||| || |||||||| | |||||||||||||| |||||| || ||| ||||| |||| ||||||||||||| ||||||    
T  4205381 tgacttttttgaaaaagttacttttaattttaatgtttgattcatttttaaattattgattacttattcatgataaatagtaattcatctagtgatgctt 4205282  T
Q  352 gcaa 355  Q
    ||||    
T  4205281 gcaa 4205278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 17168110 - 17168007
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  ||| |||| || |||||||| | |||||||||||||| |||||| || ||||||||| |||| ||||||||||||| ||||||    
T  17168110 tgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaattattgattactaattaatgataaatagtaattcatctagtgatgctt 17168011  T
Q  352 gcaa 355  Q
    ||||    
T  17168010 gcaa 17168007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 17173687 - 17173584
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  ||| |||| || |||||||| | |||||||||||||| |||||| || ||| ||||| |||| ||||||||||||| ||||||    
T  17173687 tgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaattattgattacttattcatgataaatagtaattcatctagtgatgctt 17173588  T
Q  352 gcaa 355  Q
    ||||    
T  17173587 gcaa 17173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 4934026 - 4934130
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcattttt-aaattgttgattgctgattaatgatcaatattaattcatctagtaatgct 350  Q
    ||||||||||||| | |||||||||||||||||||||   || |||||| ||||| |||||| |||||||||||| ||||  |||||||||| ||||||     
T  4934026 tgacttttttgaacaagttaattttgatcttaatgtttaatttatttttaaaatttttgattactgattaatgattaatagaaattcatctattaatgcg 4934125  T
Q  351 tgcaa 355  Q
    |||||    
T  4934126 tgcaa 4934130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 42200131 - 42200024
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    |||||||| |||||||||| |||||||| ||| || ||||| | || ||||||||||| |||||| ||||||||||| || || || |||||||||||||    
T  42200131 aaattgacctttttgaaaaagttaattt-gattttgatgtttgattaatttttaaattattgattactgattaatgaacagtagtatattcatctagtaa 42200033  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  42200032 tgcttgcaa 42200024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 220 - 355
Target Start/End: Complemental strand, 20768511 - 20768376
Alignment:
Q  220 taatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgatt 319  Q
    ||||||||||||| ||  || ||| || ||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  20768511 taatgggagcttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgatcttaatgttcaattcatttttaaattgttgattactgatt 20768412  T
Q  320 aatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20768411 aatgatcaatagtaattcatctagtaatgcttgcaa 20768376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 355
Target Start/End: Original strand, 6090941 - 6091072
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||| | |||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  6090941 gggagcttctacggtgcagtcagaaaacttacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 6091040  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||||||||||||||||    
T  6091041 atcaatagtaattcatctagtaatgcttgcaa 6091072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 33619234 - 33619124
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctg---attaatgatcaatattaattcatctagt 344  Q
    |||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||   |||||||||||||| |||||||||||||    
T  33619234 aaattgactttttttaaaaagttaattttaatcttaatgttcgattcatttttaaattgttgattgctgatcattaatgatcaatagtaattcatctagt 33619135  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  33619134 aatgcttgcaa 33619124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 3879730 - 3879829
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  3879730 ttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatcaatagtaattcatctagtaatgcttgcaa 3879829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 355
Target Start/End: Original strand, 7234783 - 7234925
Alignment:
Q  216 taattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttga---tt 312  Q
    ||||||||||||||||  ||  || ||| || ||| ||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||   ||    
T  7234783 taattaatgggagcttttacggtgtagtcaggaaaatgatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgttgattgtt 7234882  T
Q  313 gctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    | |||||||||||||||| ||||||||||||||||| ||||||    
T  7234883 gttgattaatgatcaatagtaattcatctagtaatgtttgcaa 7234925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 33892799 - 33892902
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| | ||||||||| | |||||||||||||||||||||  |||||||||||||||| |||||||| |||||||| ||    
T  33892799 tgacttttttgaaaaagttaattttaaccttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatttagtaatgttt 33892898  T
Q  352 gcaa 355  Q
    ||||    
T  33892899 gcaa 33892902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 252 - 352
Target Start/End: Complemental strand, 1946233 - 1946131
Alignment:
Q  252 tgacttttttgaaaag-gttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaatgc 349  Q
    |||||||||||||||  |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||    
T  1946233 tgacttttttgaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctaataatgc 1946134  T
Q  350 ttg 352  Q
    |||    
T  1946133 ttg 1946131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 7054559 - 7054663
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaatgct 350  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||||||  |||||||||||||||| || |||||| |||||||| |    
T  7054559 tgacttttttgaaaaagttaattttgattttaatgtttgattcatctttaaattgttgattaatgattaatgatcaatagtatattcatttagtaatgtt 7054658  T
Q  351 tgcaa 355  Q
    |||||    
T  7054659 tgcaa 7054663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 269 - 355
Target Start/End: Original strand, 4318626 - 4318712
Alignment:
Q  269 ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||| || |||||||| | || ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  4318626 ttaattttaattttaatgtttgatttatttttaaattgttgattaatgattaatgatcaatagtaattcatctagtaatgcttgcaa 4318712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 8513618 - 8513522
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| || |||||||| | |||||||||||||||||       ||||||||||||||| ||||||||||||||||||||    
T  8513618 tgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgtt-------gattaatgatcaatagtaattcatctagtaatgctt 8513526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 5627785 - 5627685
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaatgcttgca 354  Q
    |||||| ||||  ||||||||||| ||||| || | ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||    
T  5627785 ttttttaaaaaaattaattttgattttaatatttgattcatttttaaattgttgattactgattaatgatcaatagtatattcacctagtaatgcttgca 5627686  T
Q  355 a 355  Q
    |    
T  5627685 a 5627685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 21016916 - 21017008
Alignment:
Q  263 aaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| ||||||||| |||||||| || | ||||||| ||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  21016916 aaaaagttaattttaatcttaatatttgattcatttataaattgttgattactgattcatgattaatagtaattcatctagtaatgcttgcaa 21017008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 254 - 355
Target Start/End: Complemental strand, 29182556 - 29182458
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    ||||||||||||| |||||||||  |||||||| | | |||||||||||||||||||||| ||||||||||||   | |||||||||||||||| |||||    
T  29182556 acttttttgaaaaagttaattttagtcttaatgattgattcatttttaaattgttgattgttgattaatgatc---agtaattcatctagtaatacttgc 29182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 6089286 - 6089197
Alignment:
Q  259 tttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||  |||||||| || |||||||| | |||||||||||||||||||||       ||||||||||| |||||||| |||||||||||||||    
T  6089286 tttgaaaaaattaattttaattttaatgtttgattcatttttaaattgttgatt-------aatgatcaatagtaattcatatagtaatgcttgcaa 6089197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 33724062 - 33724117
Alignment:
Q  268 gttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||  |||||||||    
T  33724062 gttaattttgatcttaatgtttgattcatttttaaattgttgcttaatgattaatg 33724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 14758425 - 14758322
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  14758425 tgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgttgattaatgatcaatagtaattcatctagtaatgctt 14758326  T
Q  352 gcaa 355  Q
    ||||    
T  14758325 gcaa 14758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 15168500 - 15168386
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||| ||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15168500 agttaggaaactgatttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatgatcaatagtaattcatc 15168401  T
Q  341 tagtaatgcttgcaa 355  Q
    || ||||||||||||    
T  15168400 taataatgcttgcaa 15168386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 10923127 - 10923017
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  10923127 agaaaactgactcttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagt 10923028  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  10923027 aatgcttgcaa 10923017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 32216476 - 32216345
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||| |||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  32216476 gggagcttctacggtgcagtcagaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 32216377  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||| ||||||||||||    
T  32216376 atcaatagtaattcatctaataatgcttgcaa 32216345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 19899521 - 19899655
Alignment:
Q  222 atgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaa 321  Q
    ||||||||||| ||| || |||||| ||| ||||||||||| ||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  19899521 atgggagcttctacagtgcagttaggaaactgacttttttggaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaa 19899620  T
Q  322 tgatcaatatta-attcatctagtaatgcttgcaa 355  Q
    ||||||||| || ||||||||||||||||||||||    
T  19899621 tgatcaatagtatattcatctagtaatgcttgcaa 19899655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 2960137 - 2960038
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  2960137 ttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 2960038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 11742155 - 11742254
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  11742155 ttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 11742254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 28564562 - 28564669
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  28564562 aaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtaat 28564661  T
Q  348 gcttgcaa 355  Q
    | ||||||    
T  28564662 gtttgcaa 28564669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 32267431 - 32267324
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||||||  ||||||||||| |||||||| | ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  32267431 aaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgttcaatagtaattcatctagtaat 32267332  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  32267331 gcttgcaa 32267324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 37451682 - 37451575
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  37451682 aaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 37451583  T
Q  348 gcttgcaa 355  Q
    | ||||||    
T  37451582 gtttgcaa 37451575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 221 - 355
Target Start/End: Complemental strand, 46931834 - 46931699
Alignment:
Q  221 aatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgatta 320  Q
    |||||||||||| ||  || ||| || ||| ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| |||||||    
T  46931834 aatgggagcttctacggtgcagtaaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgatta 46931735  T
Q  321 atgatcaatatta-attcatctagtaatgcttgcaa 355  Q
    |||||||||| || ||||||||||||||||||||||    
T  46931734 atgatcaataatatattcatctagtaatgcttgcaa 46931699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 48353931 - 48353832
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  48353931 ttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatctagtaatgcttgcaa 48353832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 34012135 - 34012268
Alignment:
Q  222 atgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaa 321  Q
    ||||||||||| ||  || ||| || ||| |||||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  34012135 atgggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaa 34012234  T
Q  322 tgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| |||||||| |||||||||||||||    
T  34012235 tgatcaatagtaattcatatagtaatgcttgcaa 34012268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 15383331 - 15383223
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggtt-catttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    ||||||| ||||||||||| |||||||||||| |||||||| | || ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  15383331 aaattgatttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgttgattgctgattaataatcaatagtaattcatctagtaa 15383232  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  15383231 tgcttgcaa 15383223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 31621331 - 31621435
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttt-taaattgttgattgctgattaatgatcaatattaattcatctagtaatgct 350  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| || |||||||| |||||||    
T  31621331 tgacttttttgaaaaagttaattttgatcttaatgttcgattcattttttaaattgttgattgatgattaatgatcaatagtagttcatctactaatgct 31621430  T
Q  351 tgcaa 355  Q
    |||||    
T  31621431 tgcaa 31621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 1547664 - 1547561
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  |||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  1547664 tgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatggtaattcatctagtaatgctt 1547565  T
Q  352 gcaa 355  Q
    ||||    
T  1547564 gcaa 1547561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 8222528 - 8222418
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggtt-catttttaaattgttgattgctgattaatgatcaatattaattcatctag 343  Q
    |||||| ||||||||||||||| |||||||||||| |||||||| | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  8222528 agaaaactgacttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgatcaata-taattcatctag 8222430  T
Q  344 taatgcttgcaa 355  Q
    ||||||||||||    
T  8222429 taatgcttgcaa 8222418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 9902836 - 9902939
Alignment:
Q  251 ttgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgct 350  Q
    |||||||||||||||| |||||||||||| ||||| || | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  9902836 ttgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtagtgct 9902935  T
Q  351 tgca 354  Q
    ||||    
T  9902936 tgca 9902939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 38823607 - 38823504
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| ||||||||| |||||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38823607 tgacttttttaaaaaagttaattttaatcttaatatttgtttcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 38823508  T
Q  352 gcaa 355  Q
    ||||    
T  38823507 gcaa 38823504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 21290004 - 21289890
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    ||||| |||| ||||||||||  |||  |||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21290004 agttaaaaaactgacttttttagaaaaattaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatc 21289905  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||| ||||||    
T  21289904 tagtaatgtttgcaa 21289890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 10181792 - 10181893
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    ||||||||| ||| ||||||| ||||||||||||| | |||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  10181792 acttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgttgattaatgttcaatagtaattcatctagtaatgcttgc 10181891  T
Q  354 aa 355  Q
    ||    
T  10181892 aa 10181893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 23999745 - 23999637
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    |||||||| ||||| |||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||    
T  23999745 aaattgacctttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctagtaa 23999646  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  23999645 tgcttgcaa 23999637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 219 - 355
Target Start/End: Original strand, 27532732 - 27532867
Alignment:
Q  219 ttaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgat 318  Q
    |||||||||||||| ||  || ||| |  ||| ||| ||||||||||| ||||||||| ||||||||||| | ||||||||||| ||||||||| |||||    
T  27532732 ttaatgggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaa-ttgttgattactgat 27532830  T
Q  319 taatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27532831 taatgatcaatagtaattcatctagtaatgcttgcaa 27532867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 27763089 - 27763197
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    |||||||| |||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  27763089 aaattgacatttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatatttatctagtaa 27763188  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  27763189 tgcttgcaa 27763197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 3535312 - 3535213
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| |||| |||| |||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  3535312 tttttttaaaaagttagttttaatcttaatgtttgattcatttttaaattgttgattgttgattaatgatcaatagtaattcatctagtaatgcttgcaa 3535213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 27563692 - 27563791
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||| ||||||| ||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  27563692 ttttttggaaaagttaattatgatcttaatgtttgattcttttttaaattgttgattactgattaatgatcaatattaattcatctagtaatacttgcaa 27563791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 30254816 - 30254713
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| |||||||||||| |||||||| | |||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  30254816 tgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaataatcaatagtaattcatctagtaatgctt 30254717  T
Q  352 gcaa 355  Q
    ||||    
T  30254716 gcaa 30254713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 39393781 - 39393674
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||| |||| ||||||||| || ||||||||   ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  39393781 aaattgacttttttaaaaaagttaattttaattttaatgttttattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 39393682  T
Q  348 gcttgcaa 355  Q
    | ||||||    
T  39393681 gtttgcaa 39393674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 346
Target Start/End: Complemental strand, 15752458 - 15752328
Alignment:
Q  216 taattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgct 315  Q
    ||||| ||||||||||| ||  || ||| |||||||||| |||||  ||||  ||||||||||||||||||||   ||||||||||||||||||||| ||    
T  15752458 taatttatgggagcttctacggtgcagtcagaaaattgattttttaaaaaaaattaattttgatcttaatgtttaattcatttttaaattgttgattact 15752359  T
Q  316 gattaatgatcaatattaattcatctagtaa 346  Q
    ||||||||||||||| |||||||||||||||    
T  15752358 gattaatgatcaatagtaattcatctagtaa 15752328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 355
Target Start/End: Complemental strand, 16416022 - 16415936
Alignment:
Q  269 ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  16416022 ttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctaataatgcttgcaa 16415936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 51129254 - 51129149
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| ||||||||  || |||||  | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  51129254 aaattgacttttttgaaaaagttaattt--attttaatacttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 51129157  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  51129156 gcttgcaa 51129149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 4330670 - 4330571
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| |||  |||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  4330670 ttttttggaaaaattaattttgatcttaatgtttgattcatttttatattgttgattactgattaatgatcaattgtaattcatctagtaatgcttgcaa 4330571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 7078850 - 7078949
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| ||||||||| | | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||    
T  7078850 ttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtaatgtttgcaa 7078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 47279578 - 47279479
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||||    
T  47279578 ttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactaattaatgatcaatagtaattcatctaataatgtttgcaa 47279479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 355
Target Start/End: Complemental strand, 22171135 - 22171001
Alignment:
Q  221 aatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgatta 320  Q
    |||||||||||| ||  || | |||||||| ||| ||||||||||| |||||||||||| |||||||| | || |||||||||||||||||| || ||||    
T  22171135 aatgggagcttctacggtgcaattagaaaactgatttttttgaaaaagttaattttgattttaatgtttgatttatttttaaattgttgattactaatta 22171036  T
Q  321 atgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||| ||||| ||||| ||||| ||||||    
T  22171035 atgatcaatagtaatttatctaataatgtttgcaa 22171001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 27227273 - 27227371
Alignment:
Q  257 tttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| ||| |||||||||||| ||||||||   ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27227273 tttttggaaaagttaattttgatattaatgtttaattcatttttaaatggttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 27227371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 25161015 - 25160922
Alignment:
Q  263 aaaaggttaattttgatcttaatgttcggtt-catttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||| |||||||| | || ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  25161015 aaaaggttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgatcaatagtaattcatatagtaatgcttgcaa 25160922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 355
Target Start/End: Complemental strand, 40885216 - 40885103
Alignment:
Q  243 ttagaaaattgacttttttgaaaaggttaa-ttttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatct 341  Q
    ||||||||||||||||||| |||| ||||| |||| | |||||| |||| ||||||||| |||| ||||||||| |||||||||||||| ||||||||||    
T  40885216 ttagaaaattgacttttttaaaaatgttaacttttaaccttaatattcgattcatttttgaattattgattgctaattaatgatcaatagtaattcatct 40885117  T
Q  342 agtaatgcttgcaa 355  Q
    ||||||| ||||||    
T  40885116 agtaatgtttgcaa 40885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 238300 - 238399
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||| ||||| ||||||||||| | |||||||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  238300 ttttttgaaaaagttgattttaatcttaatgtttgattcatttttaaattgtggattactgattcatgattaatagtaattcatctagtaatgcttgcaa 238399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 3309538 - 3309443
Alignment:
Q  261 tgaaaaggttaattttga-tcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| ||||||||| | ||| |||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  3309538 tgaaaaagttaattttaaatctaaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 3309443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 27266984 - 27267086
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||| |||||| ||||||||||||||||||||   |||||||||||||| ||||||  |||||||| ||||||| ||||||||||||||||||||    
T  27266984 tgactttttggaaaag-ttaattttgatcttaatgtttaattcatttttaaattattgattattgattaattatcaatagtaattcatctagtaatgctt 27267082  T
Q  352 gcaa 355  Q
    ||||    
T  27267083 gcaa 27267086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 28770050 - 28769943
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||| ||||||||||| ||||||||| || |||||||| | |||||||||||||||||||||  | |||||||||||||| |||||||||||| |||    
T  28770050 aaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattattaattaatgatcaatagtaattcatctagcaat 28769951  T
Q  348 gcttgcaa 355  Q
    | ||||||    
T  28769950 gtttgcaa 28769943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 47682277 - 47682380
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||| | ||||||||| |||||||||||   ||| ||||||||||||| ||| ||||||||||||||||| |||||||| |||||||||||    
T  47682277 tgacttttttgaacaagttaattttaatcttaatgtttaattcttttttaaattgttaattactgattaatgatcaatagtaattcatttagtaatgctt 47682376  T
Q  352 gcaa 355  Q
    ||||    
T  47682377 gcaa 47682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 1359740 - 1359821
Alignment:
Q  274 tttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||    
T  1359740 tttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcgatagtaattcatccagtaatgcttgcaa 1359821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 31963010 - 31962906
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaa-ttgttgattgctgattaatgatcaatattaattcatctagtaatgct 350  Q
    ||||||||||||||| ||||||||| ||||||||||| | || ||||||||| ||||||||| | ||||||||||||||| || |||||||| |||||||    
T  31963010 tgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaaattgttgattaccgattaatgatcaatagtagttcatctaataatgct 31962911  T
Q  351 tgcaa 355  Q
    |||||    
T  31962910 tgcaa 31962906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 33725398 - 33725478
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttca-tttttaaattgttgattgctgattaatgatcaatattaat 335  Q
    ||||||||||| ||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  33725398 ttttttgaaaaagtttattttgatcttaatgttcgattcatttttttaattgttgattgctgattaatgatcaatagtaat 33725478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 30326775 - 30326838
Alignment:
Q  292 ttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  30326775 ttcatttttaaattgttgattactgattgatgatcaatagtaattcatctagtaatgcttgcaa 30326838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 42721435 - 42721334
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||||||| |||||| |||| ||||||| |||| |||||||| | |||||||||||||| |||||| || |||||||||||||| ||||| |||||||    
T  42721435 agaaaattga-ttttttaaaaaagttaattatgattttaatgtttgattcatttttaaattattgattactcattaatgatcaatagtaattaatctagt 42721337  T
Q  345 aat 347  Q
    |||    
T  42721336 aat 42721334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 37618729 - 37618787
Alignment:
Q  297 ttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||    
T  37618729 ttttaaattgttgattattgattaatggtcaatactaattcatctagtaatgcttgcaa 37618787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 41926532 - 41926449
Alignment:
Q  269 ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttg 352  Q
    |||||| |||| |||||||| | |||| ||||||||  ||||||  | |||||||||||||| |||||||||||||||||||||    
T  41926532 ttaattatgattttaatgtttgattcaattttaaatcattgattattaattaatgatcaatagtaattcatctagtaatgcttg 41926449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 48620982 - 48620922
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgatt 312  Q
    |||||||| |||||| ||||||||| ||||||||||| | |||||||| ||||||||||||    
T  48620982 tgacttttctgaaaaagttaattttaatcttaatgtttgattcattttaaaattgttgatt 48620922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 18422986 - 18422941
Alignment:
Q  310 attgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||    
T  18422986 attgttgattaatgatcaatagtaattcatctagcaatgcttgcaa 18422941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 38759883 - 38759847
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgtt 288  Q
    ||||||||||||||| |||||||||||||||||||||    
T  38759883 tgacttttttgaaaaagttaattttgatcttaatgtt 38759847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 26973870 - 26973807
Alignment:
Q  16 aatatccctattggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggt 79  Q
    ||||||| ||||||||  |||| | |||||||||||||||||| || ||||||||||| |||||    
T  26973870 aatatccatattggaatagaagccttggagctgatcatttcatgctagcttgccatgactgggt 26973807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 35459494 - 35459608
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35459494 agttagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgatcaatagtaattcatc 35459593  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||| ||||||    
T  35459594 tagtaatgtttgcaa 35459608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 35859330 - 35859227
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35859330 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatattaattcatctagtaatgctt 35859231  T
Q  352 gcaa 355  Q
    ||||    
T  35859230 gcaa 35859227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 43643382 - 43643492
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  43643382 agaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtcgattactgattaatgatcaatagtaattcatctagt 43643481  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  43643482 aatgcttgcaa 43643492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 33906634 - 33906505
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||| || ||| |||||| ||||||||||||||| |||||||||||||||| | |||| |||||||||||||  |||||||||||||||||    
T  33906634 gggagcttctacagtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttactattcgattcatttttaaat--ttgattgctgattaatg 33906537  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||||||||||||||||    
T  33906536 atcaatagtaattcatctagtaatgcttgcaa 33906505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 7890751 - 7890854
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7890751 tgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 7890850  T
Q  352 gcaa 355  Q
    ||||    
T  7890851 gcaa 7890854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 16446669 - 16446772
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16446669 tgacttttttgaaaaagttaattttgattttaatgttagattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 16446768  T
Q  352 gcaa 355  Q
    ||||    
T  16446769 gcaa 16446772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 23854229 - 23854328
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  23854229 ttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgatcaatagtaattcatctagtaatgcttgcaa 23854328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 34895386 - 34895255
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || |||||| |||||||||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||    
T  34895386 gggagcttctacggtgcagttaggaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 34895287  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| |||||||| |||||||||||||||    
T  34895286 atcaatagtaattcatatagtaatgcttgcaa 34895255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 37970313 - 37970416
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  37970313 tgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgatcaacagtaattcatctagtaatgctt 37970412  T
Q  352 gcaa 355  Q
    ||||    
T  37970413 gcaa 37970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 12587989 - 12587875
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    ||||||| || |||||||||||||||  |||||||||||||||||||| | ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  12587989 agttagagaactgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattgttaattactgattaatgatcaatagtaattcatc 12587890  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||||||||||    
T  12587889 tagtaatgcttgcaa 12587875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 1149422 - 1149529
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||||||  ||||||||||| |||||||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  1149422 aaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattaccgattaatgatcaatagtaattcatctagtaat 1149521  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  1149522 gcttgcaa 1149529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 466224 - 466125
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| | ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  466224 ttttttgaataagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 466125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 5299740 - 5299843
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| |||||||||||   ||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  5299740 tgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattaatgattaatagtaattcatctagtaatgctt 5299839  T
Q  352 gcaa 355  Q
    ||||    
T  5299840 gcaa 5299843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 38644374 - 38644271
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | || ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  38644374 tgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaatttttgattactgattaatgatcaatagtaattcatctagtaatgctt 38644275  T
Q  352 gcaa 355  Q
    ||||    
T  38644274 gcaa 38644271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 44869893 - 44869790
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| || |||||||| | |||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  44869893 tgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttggttactgattaatgatcaatagtaattcatctagtaatgctt 44869794  T
Q  352 gcaa 355  Q
    ||||    
T  44869793 gcaa 44869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 223 - 355
Target Start/End: Complemental strand, 1205352 - 1205220
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||| ||||||||||||||||| |||| |||||||||||||||  |||| | ||||||||||||||| |||||  ||||||||    
T  1205352 tgggagcttctacggtgtagtcagaaaattgacttttttaaaaaagttaattttgatcttgttgtttgattcatttttaaattgctgattagtgattaat 1205253  T
Q  323 gatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||| |||||||||||||||| |||||||    
T  1205252 gatcaatagtaattcatctagtaatacttgcaa 1205220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 8803606 - 8803714
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||| ||| ||||||||||||||||| || |||||||| ||||    
T  8803606 aaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttcattactgattaatgatcaatagtatattcatctggtaa 8803705  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  8803706 tgcttgcaa 8803714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 18259479 - 18259372
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||||||||||||| || |||||| | | ||||||||||||||||||||| || |||| ||||||| | ||||||||||||||||    
T  18259479 aaattgacttttttgaaaaggttaattttaattttaatgattgattcatttttaaattgttgattactcattactgatcaacaataattcatctagtaat 18259380  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  18259379 gcttgcaa 18259372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 33198202 - 33198095
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| |||||| || ||||||||| | | |||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||    
T  33198202 aaattgacttttttgaaaaagttaatcttaatcttaatgattgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtgat 33198103  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  33198102 gcttgcaa 33198095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 355
Target Start/End: Complemental strand, 16223242 - 16223156
Alignment:
Q  269 ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16223242 ttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 16223156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 11727425 - 11727317
Alignment:
Q  248 aaattgac-ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    |||||||| |||||| |||| ||||||||| ||||||||  | | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  11727425 aaattgacattttttaaaaaagttaattttaatcttaataattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaa 11727326  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  11727325 tgcttgcaa 11727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 31933680 - 31933776
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatg 348  Q
    |||||||||||||||  ||||||||||||||||| || | ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  31933680 tgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaatcgttgattactgattaatgatcaataataattcatctagtaatg 31933776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 1953786 - 1953885
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||  |||||||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||    
T  1953786 ttttttgaaaaaattaattttgatcttaatgtttgattcattttaaaattgttgattattgattaatgatcaatagtaattcatctaataatgcttgcaa 1953885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 4132480 - 4132583
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||||||||||||||||    ||||||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||    
T  4132480 tgacttttttggaaaagttaattttgatcttaatgtgtaattcatttttaaattgttgattacaaattaatgatcaatagtaattcatctagtaatgctt 4132579  T
Q  352 gcaa 355  Q
    ||||    
T  4132580 gcaa 4132583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 27082636 - 27082735
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| |||||||||||||||||||||   |||||||||||||||||||||  ||||||||||| | || ||||||||||||||||||||||||    
T  27082636 ttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattattgattaatgataagtagtaattcatctagtaatgcttgcaa 27082735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 34951851 - 34951954
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| |||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||  |||    
T  34951851 tgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatgtagtaagactt 34951950  T
Q  352 gcaa 355  Q
    ||||    
T  34951951 gcaa 34951954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 347
Target Start/End: Complemental strand, 41362818 - 41362723
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||  ||||||||||||||||||||   ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  41362818 tgacttttttgaaaaaattaattttgatcttaatgtttaattcatttttaaattgttgattactggttaatgatcaatagtaattcatctagtaat 41362723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 24823194 - 24823291
Alignment:
Q  258 ttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| |||| ||||||||| ||||||||||| | || |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  24823194 ttttaaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatgaacaatagtaattcatctagtaatgcttgcaa 24823291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 6098331 - 6098410
Alignment:
Q  276 tgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||| | ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  6098331 tgatcttaatgtttgattcatttttaaattgttgattactaattaatgatcaatagtaattcatctagtaatgcttgcaa 6098410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 40862820 - 40862712
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcattttt-aaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    ||||||||||||||||||| |||| |||| ||||||||||| | ||||||||| ||||||| |||| |||||| ||||  |||| |||||||||||||||    
T  40862820 aaattgacttttttgaaaaagttacttttaatcttaatgtttgattcattttttaaattgtcgattactgatttatgacaaatagtaattcatctagtaa 40862721  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  40862720 tgcttgcaa 40862712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 1149756 - 1149817
Alignment:
Q  294 catttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  1149756 catttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 1149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 10554991 - 10555101
Alignment:
Q  245 agaaaattgacttttttgaaaagg-ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaata--ttaattcatct 341  Q
    ||||||||||||||||||||||   |||||||||||||||||||| | ||||||||||||||||| ||| |   |||||||||||||   ||||||||||    
T  10554991 agaaaattgacttttttgaaaaaaattaattttgatcttaatgtttgattcatttttaaattgtttattac---ttaatgatcaatagtgtaattcatct 10555087  T
Q  342 agtaatgcttgcaa 355  Q
    ||||||||||||||    
T  10555088 agtaatgcttgcaa 10555101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 348
Target Start/End: Complemental strand, 43026099 - 43025974
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaag-gttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    ||||||||| | ||||  ||||| ||||||| |||||||||||  ||||||||| || |||||||| | ||||||||||||||||||||  |||||| ||    
T  43026099 gggagcttctaaactgcggttaggaaattgatttttttgaaaaaagttaattttaattttaatgtttgattcatttttaaattgttgatcactgattcat 43026000  T
Q  323 gatcaatattaattcatctagtaatg 348  Q
    |||||||| ||||| ||||| |||||    
T  43025999 gatcaatagtaatttatctaataatg 43025974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 30654381 - 30654480
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaatgcttgca 354  Q
    ||||||||||| |||||||||||| ||||| || | |||||||| |||||||| ||| ||||||||||||||||| || |||||| ||||||||||||||    
T  30654381 ttttttgaaaaagttaattttgattttaatatttgattcatttt-aaattgttaattactgattaatgatcaataatatattcatttagtaatgcttgca 30654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 39098917 - 39099016
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| ||||  |||||||| || |||||||| | | |||||||||||| ||||||  | |||||||||||||| ||||||||||||||||||||||||    
T  39098917 ttttttaaaaaaattaattttaattttaatgtttgatgcatttttaaattattgattattaattaatgatcaatagtaattcatctagtaatgcttgcaa 39099016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 36694764 - 36694863
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| |||| |||| || |||||||| | || ||||||||||| |||||| || ||| ||||| |||| ||||||||||||| ||||||||||    
T  36694764 ttttttgaaaaagttacttttaattttaatgtttgatttatttttaaattattgattacttattcatgataaatagtaattcatctagtgatgcttgcaa 36694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 349
Target Start/End: Complemental strand, 12876506 - 12876409
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgc 349  Q
    |||||||||| |||| |||| |||| || |||||||| | || ||||| ||| |||||||| || ||| ||||| |||| ||||||||||||||||||    
T  12876506 tgacttttttaaaaaagttacttttaattttaatgtttgatttattttcaaactgttgattacttattcatgataaatagtaattcatctagtaatgc 12876409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 9864504 - 9864441
Alignment:
Q  292 ttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||||| | |||| ||||| | || | ||||||||||||||||||||||    
T  9864504 ttcatttttaaattgttgattaccgattcatgattactagttattcatctagtaatgcttgcaa 9864441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 9864578 - 9864533
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatg 286  Q
    |||||| ||| ||||||||||||||| ||||||||| |||||||||    
T  9864578 agttaggaaactgacttttttgaaaaagttaattttaatcttaatg 9864533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 13307979 - 13307939
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgtt 288  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  13307979 aaattgactattttgaaaaagttaattttaatcttaatgtt 13307939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 33908640 - 33908527
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  33908640 agttagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattgctgattaatgatcaatagtaatt-atc 33908542  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||||||||||    
T  33908541 tagtaatgcttgcaa 33908527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 24886484 - 24886381
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24886484 tgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgatcaatagtaattcatctagtaatgctt 24886385  T
Q  352 gcaa 355  Q
    ||||    
T  24886384 gcaa 24886381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 2888216 - 2888323
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||||||||||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2888216 agaaaattgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagt 2888315  T
Q  345 aatgcttg 352  Q
    ||||||||    
T  2888316 aatgcttg 2888323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 31705386 - 31705493
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  31705386 aaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 31705485  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  31705486 gcttgcaa 31705493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 39573208 - 39573105
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  39573208 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 39573109  T
Q  352 gcaa 355  Q
    ||||    
T  39573108 gcaa 39573105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 43254256 - 43254154
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  43254256 aaattgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 43254157  T
Q  348 gct 350  Q
    |||    
T  43254156 gct 43254154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 12910752 - 12910649
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  12910752 tgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgctgattaatgttcaatagtaattcatctagtaatgctt 12910653  T
Q  352 gcaa 355  Q
    ||||    
T  12910652 gcaa 12910649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 15992318 - 15992421
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  15992318 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttaattactgattaatgatcaatagtaattcatctagtaatgctt 15992417  T
Q  352 gcaa 355  Q
    ||||    
T  15992418 gcaa 15992421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 17157805 - 17157912
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| || || |||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  17157805 aaattgacttttttgaaaaagtcaagtttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatctagtaat 17157904  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  17157905 gcttgcaa 17157912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 31786424 - 31786527
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  31786424 tgacttttttgaaaaagttaattttgatattaatgtttgattcatttttaaattgttgattactgattaatgaacaatagtaattcatctagtaatgctt 31786523  T
Q  352 gcaa 355  Q
    ||||    
T  31786524 gcaa 31786527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 38528019 - 38528118
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  38528019 ttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 38528118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 22973853 - 22973963
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||| |||||| |||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  22973853 agaaaactgattttttttaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagt 22973952  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  22973953 aatgcttgcaa 22973963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 35826254 - 35826367
Alignment:
Q  242 gttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatct 341  Q
    ||||||||| ||  |||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  35826254 gttagaaaactggttttttttaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatct 35826353  T
Q  342 agtaatgcttgcaa 355  Q
    ||||||||||||||    
T  35826354 agtaatgcttgcaa 35826367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 699547 - 699444
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||    
T  699547 tgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttaattactgattaataatcaatagtaattcatctagtaatgctt 699448  T
Q  352 gcaa 355  Q
    ||||    
T  699447 gcaa 699444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 19120256 - 19120153
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  19120256 tgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgatcactgattaatgatcaatagtaattcatctagtaatgctt 19120157  T
Q  352 gcaa 355  Q
    ||||    
T  19120156 gcaa 19120153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 22020020 - 22019921
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| |||||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22020020 tgacttttttgaaaaagttaattttaatcttaatatttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 22019921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 22255579 - 22255476
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  22255579 tgactttttttaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaaggctt 22255480  T
Q  352 gcaa 355  Q
    ||||    
T  22255479 gcaa 22255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 22981190 - 22981087
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||    
T  22981190 tgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatctagtaatgatt 22981091  T
Q  352 gcaa 355  Q
    ||||    
T  22981090 gcaa 22981087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 25669969 - 25669870
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25669969 ttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 25669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 27330705 - 27330598
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||| |||||||| ||||||||| ||||||||||| | ||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||    
T  27330705 aaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattactgattaatgatcaatagtaattcatctagtaat 27330606  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  27330605 gcttgcaa 27330598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 28416329 - 28416432
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||| |||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  28416329 tgacttttttgaaaaagttaattttaatcttaatgtttgattcttttttaaattgttgattgttgattaatgatcaatagtaattcatcaagtaatgctt 28416428  T
Q  352 gcaa 355  Q
    ||||    
T  28416429 gcaa 28416432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 35504766 - 35504659
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| || ||||||||| |||||||| | ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  35504766 aaattgacttttttgaaaaagtcaattttgattttaatgtttgattcatttttaaattgttgattactgattaataatcaatagtaattcatctagtaat 35504667  T
Q  348 gcttgcaa 355  Q
     |||||||    
T  35504666 acttgcaa 35504659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 35511260 - 35511363
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  35511260 tgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatatagtaatgctt 35511359  T
Q  352 gcaa 355  Q
    ||||    
T  35511360 gcaa 35511363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 40133810 - 40133679
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||||||||||||||||||| ||||||||| |||||||||||   ||||||||||||||||||||| |||||| |||    
T  40133810 gggagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 40133711  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    || |||| ||||||||| ||||||||||||||    
T  40133710 attaatagtaattcatccagtaatgcttgcaa 40133679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 42343118 - 42343015
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| |||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  42343118 tgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatggtaattcatctagtaatgctt 42343019  T
Q  352 gcaa 355  Q
    ||||    
T  42343018 gcaa 42343015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 8741664 - 8741766
Alignment:
Q  253 gacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttg 352  Q
    |||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||    
T  8741664 gacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatttcatctagtgatgcttg 8741763  T
Q  353 caa 355  Q
    |||    
T  8741764 caa 8741766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 43308427 - 43308541
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||| ||| ||||||||||||||| |||||||||||| ||| | || | ||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  43308427 agttaggaaactgacttttttgaaaaagttaattttgattttagtatttgattcgtttttaaattgttgatttctgattaatgatcaatagtaattcatc 43308526  T
Q  341 tagtaatgcttgcaa 355  Q
    |||||||||||||||    
T  43308527 tagtaatgcttgcaa 43308541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 5830296 - 5830186
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggtt-catttttaaattgttgattgctgattaatgatcaatattaattcatctag 343  Q
    ||||||||||| |||| |||||| ||||||||||| |||||||| | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  5830296 agaaaattgacattttggaaaag-ttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgatcaatagtaattcatctag 5830198  T
Q  344 taatgcttgcaa 355  Q
    ||||||||||||    
T  5830197 taatgcttgcaa 5830186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 5837952 - 5837849
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||||||||||||| || |||||| | | |||||||||||||||||||||  |||||||||||||| | ||||||||||||||||||||    
T  5837952 tgacttttttgaaaaggttaattttaattttaatgattgattcatttttaaattgttgattattgattaatgatcaacagtaattcatctagtaatgctt 5837853  T
Q  352 gcaa 355  Q
    ||||    
T  5837852 gcaa 5837849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 7208642 - 7208745
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||    
T  7208642 tgactttttttaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatctagtaatactt 7208741  T
Q  352 gcaa 355  Q
    ||||    
T  7208742 gcaa 7208745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 25889767 - 25889668
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| || ||| |||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  25889767 tgacttttctggaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 25889668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 32563537 - 32563434
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| || |||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||    
T  32563537 tgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttaattgctgattaatgatcaataataatttatctagtaattctt 32563438  T
Q  352 gcaa 355  Q
    ||||    
T  32563437 gcaa 32563434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 8437362 - 8437266
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatg 348  Q
    ||||||||||||||| |||||||||||| ||||| ||   ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  8437362 tgacttttttgaaaaagttaattttgattttaatatttaattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatg 8437266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 7693618 - 7693515
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| | |||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  7693618 tgacttttctaaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgaacaatagtaattcatctagtaatgctt 7693519  T
Q  352 gcaa 355  Q
    ||||    
T  7693518 gcaa 7693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 14409123 - 14409222
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||  |||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||    
T  14409123 ttttttgaaaaatttaattttaattttaatgttcgattcatttttaaattgttgattgctgaataatgatcaatagtaattcatttagtaatgtttgcaa 14409222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 35934289 - 35934190
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| || |||||||| |  |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  35934289 ttttttgaaaaagttaattttaattttaatgtttgaatcatttttaaattgttgattactgattaatgatcaataataattcaactagtaatgcttgcaa 35934190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 36867187 - 36867056
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| ||||||||||||||||| |||| ||||||||| |||||||||||   ||||||||||||||||||||| |||||| |||    
T  36867187 gggagcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 36867088  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    || |||| ||||||||| ||||||| ||||||    
T  36867087 attaatagtaattcatccagtaatgtttgcaa 36867056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 36860828 - 36860718
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    ||||||||||||||||| |||| ||||||||| ||||||||| | | ||||||||||||||||||||| || ||| ||||| |||| |||||||| ||||    
T  36860828 agaaaattgacttttttaaaaaagttaattttaatcttaatgcttgattcatttttaaattgttgattactaattcatgattaatagtaattcatttagt 36860729  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  36860728 aatgcttgcaa 36860718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 9200617 - 9200518
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||  |||||||| || ||||  || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  9200617 ttttttgaaaaaattaattttaattttaaattttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 9200518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 26269206 - 26269107
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| |||||| ||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||| |||||||| |||||    
T  26269206 tgacttttatgaaaaagttaattttaatcttaatgattggttcatttttaaattgttgattactgattaatgatcagtagtaatttatctagtattgctt 26269107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 27318259 - 27318370
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaa-ttgttgattgctgattaatgatcaatattaattcatctag 343  Q
    |||||| |||||||||| |||| ||||||||| ||||||||||| | |||||||||||| |||||||||  |||||||||||||||| |||||||| |||    
T  27318259 agaaaactgacttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaaattgttgatttttgattaatgatcaatagtaattcatatag 27318358  T
Q  344 taatgcttgcaa 355  Q
    ||||| ||||||    
T  27318359 taatgtttgcaa 27318370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 23116008 - 23116086
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaata 330  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  23116008 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaata 23116086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 8467119 - 8467020
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| |||| |||||||||  | |||||||| | |||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  8467119 tttttttaaaaagttaattttatttttaatgtttgattcatttttaaactgttgattactaattaatgatcaatagtaattcatctagtaatgcttgcaa 8467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 15724881 - 15724786
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||||||||| |  |||||||| | |||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||    
T  15724881 ttttttgaaaaagttaattttaactttaatgtttgattcatttttaaattgttgattattgattaatgattaatagtaattcatctagtaatgctt 15724786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 25500708 - 25500807
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| |||||| | || | ||||||||||||||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  25500708 ttttttgaaaaagttaattttaatcttagtatttgattcatttttaaattgttaattactgattaatgatcaacagtatttcatctagtaatgcttgcaa 25500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 355
Target Start/End: Original strand, 13956104 - 13956243
Alignment:
Q  214 attaattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattg 313  Q
    ||||||||| | ||||||| ||  || ||| |||||  ||| ||||||||||| |||||||||||| |||||||| |    | ||  ||||||||||||     
T  13956104 attaattaaagagagcttctacggtgcagtcagaaagctgatttttttgaaaatgttaattttgattttaatgtttgaaaaagtt--aaattgttgatta 13956201  T
Q  314 ctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  13956202 ctgattaatgatcaatagtaattcatctagtaatgcttgcaa 13956243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 30969106 - 30969204
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgca 354  Q
    |||||| |||| ||||||||| || |||||||| | |||||||||||||||| |||| |||||||||||| |||| ||| |||||||||||| ||||||    
T  30969106 ttttttaaaaaagttaattttaattttaatgtttgattcatttttaaattgtggattactgattaatgattaatagtaactcatctagtaatacttgca 30969204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 14919317 - 14919394
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaat 329  Q
    |||||||||||||||  |||||||||||||||||||| | |||||||||||||| | |||| ||||||||||||||||    
T  14919317 tgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattttagatttctgattaatgatcaat 14919394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 23954542 - 23954669
Alignment:
Q  214 attaattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattg 313  Q
    ||||||||| ||||||||| |   || ||| || ||| ||||||||||||||| ||||||| |||||||||||||   ||||||||||||||||          
T  23954542 attaattaaagggagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattatgatcttaatgtttaattcatttttaaattgt------ 23954635  T
Q  314 ctgattaatgatcaatattaattcatctagtaatg 348  Q
     |||||||||||||||| ||||||||| |||||||    
T  23954636 -tgattaatgatcaatagtaattcatcaagtaatg 23954669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 1428983 - 1429043
Alignment:
Q  298 tttaaattgttga---ttgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||   || ||||||||||||||||| ||||||||||||||||||||||||    
T  1428983 tttaaattgttgaatattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 1429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 351
Target Start/End: Original strand, 21088535 - 21088643
Alignment:
Q  241 agttagaaaattgacttttttgaaaagg-ttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcat 339  Q
    |||||||||| |||||||||  ||||   |||| ||| ||||||||||| | ||||||||||||||| | |||    ||| ||||| |||| ||||||||    
T  21088535 agttagaaaactgactttttaaaaaaaaattaactttaatcttaatgtttgattcatttttaaattgattattt---attcatgattaatagtaattcat 21088631  T
Q  340 ctagtaatgctt 351  Q
    ||||||||||||    
T  21088632 ctagtaatgctt 21088643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 43975673 - 43975783
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| ||||| |||||||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43975673 agaaaactgactcttttgaaaaaattaatcttgatcttaatgttcgattcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 43975772  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  43975773 aatgcttgcaa 43975783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 48355340 - 48355226
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatc 340  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| || ||||||||||||||||| |||||||||    
T  48355340 agttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgcttactgattaatgatcaataataattcatc 48355241  T
Q  341 tagtaatgcttgcaa 355  Q
    ||||||| |||||||    
T  48355240 tagtaatacttgcaa 48355226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 22451350 - 22451253
Alignment:
Q  258 ttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22451350 ttttgaaaaagttaattttgatcttaatgttcgattcatttttaaatttttgattgctgattaatgatcaataataattcatctagtaatgcttgcaa 22451253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 4015847 - 4015744
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4015847 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 4015748  T
Q  352 gcaa 355  Q
    ||||    
T  4015747 gcaa 4015744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 11357169 - 11357272
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11357169 tgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgctt 11357268  T
Q  352 gcaa 355  Q
    ||||    
T  11357269 gcaa 11357272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 40552047 - 40552150
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  40552047 tgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaataatcaatagtaattcatctagtaatgctt 40552146  T
Q  352 gcaa 355  Q
    ||||    
T  40552147 gcaa 40552150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 247 - 355
Target Start/End: Original strand, 46297545 - 46297653
Alignment:
Q  247 aaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    |||| |||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  46297545 aaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactaattaatgatcaatagtaattcatctagtaa 46297644  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  46297645 tgcttgcaa 46297653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 1090081 - 1089978
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  1090081 tgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtaatgctt 1089982  T
Q  352 gcaa 355  Q
    ||||    
T  1089981 gcaa 1089978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 3362647 - 3362540
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||| ||| ||||||| ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  3362647 aaattgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatccagtaat 3362548  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  3362547 gcttgcaa 3362540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 25580131 - 25580024
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||| |||| |||||| || ||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  25580131 aaattgacttttttaaaaaagttaatcttaatcttaatgattggttcatttttaaattgttgattgcggattaatgatcaatagtaattcatctagtaat 25580032  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  25580031 gcttgcaa 25580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 224 - 355
Target Start/End: Original strand, 26941020 - 26941151
Alignment:
Q  224 gggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 323  Q
    ||||||||| ||  || ||| |||||| ||||||||||||||| |||||||||||| |||| | | | ||||||||||||||||||||| ||||||||||    
T  26941020 gggagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaacgcttgattcatttttaaattgttgattactgattaatg 26941119  T
Q  324 atcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||||||||||||||||||    
T  26941120 atcaatagtaattcatctagtaatgcttgcaa 26941151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 33698541 - 33698438
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| |||||||||   | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33698541 tgacttttttgaaaaagttaattttaatcttaatgactgattcatttttaaattgttgattactgattaatgatcaatattaattcatctagtaatgctt 33698442  T
Q  352 gcaa 355  Q
    ||||    
T  33698441 gcaa 33698438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 39283040 - 39282937
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  39283040 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgattaatagtaattcatctagtaatgctt 39282941  T
Q  352 gcaa 355  Q
    ||||    
T  39282940 gcaa 39282937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 47481915 - 47481807
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    ||||||| ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||    
T  47481915 aaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctagtaa 47481816  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  47481815 tgcttgcaa 47481807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 54506200 - 54506092
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    ||||||| ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||    
T  54506200 aaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatattcatctagtaa 54506101  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  54506100 tgcttgcaa 54506092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 22622510 - 22622609
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| |||||||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22622510 ttttttgaaaaagttaattttgattttaatgtttgattcatttttaaatagttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 22622609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 29099730 - 29099631
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  29099730 ttttttgaaaaagttaattttaatattaatgtttgattcatttttaaattgttgattgctgattaatgatcaatggtaattcatctagtaatgcttgcaa 29099631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 42505859 - 42505966
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||| || |||||||||||| |||| | | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  42505859 aaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 42505958  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  42505959 gcttgcaa 42505966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 44186301 - 44186408
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||| ||||| ||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  44186301 aaattgattttttcgaaaatgttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaatttatctagtaat 44186400  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  44186401 gcttgcaa 44186408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 53228944 - 53229043
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  53228944 ttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaatactaattcatctagtaatgcttgcaa 53229043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 355
Target Start/End: Original strand, 21009552 - 21009693
Alignment:
Q  215 ttaattaatgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgc 314  Q
    |||||||||||||| ||| ||  || ||| || ||| |||||||||| ||||  ||||||||||| |||||||| | ||||||||||||||||||||| |    
T  21009552 ttaattaatgggagtttctacggtgcagtcaggaaactgacttttttaaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattac 21009651  T
Q  315 tgattaatgatcaatatta-attcatctagtaatgcttgcaa 355  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  21009652 tgattaatgatcaatagtatattcatctagtaatgcttgcaa 21009693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 37158096 - 37157995
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| || |||||||||||||  ||||||||||||||||||||    
T  37158096 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactcattaatgatcaatggtaattcatctagtaatgctt 37157997  T
Q  352 gc 353  Q
    ||    
T  37157996 gc 37157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 37203456 - 37203355
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| || |||||||||||||  ||||||||||||||||||||    
T  37203456 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactcattaatgatcaatggtaattcatctagtaatgctt 37203357  T
Q  352 gc 353  Q
    ||    
T  37203356 gc 37203355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 21193995 - 21193892
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||| ||    
T  21193995 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaataatcaatagtaattcatttagtaatggtt 21193896  T
Q  352 gcaa 355  Q
    ||||    
T  21193895 gcaa 21193892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 44891885 - 44891782
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||| |||| ||||||||| ||||||||| | | ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  44891885 tgacttttttaaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatgatcaacagtaattcatctagtaatgctt 44891786  T
Q  352 gcaa 355  Q
    ||||    
T  44891785 gcaa 44891782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 52040710 - 52040813
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||||||||||| | ||||||||||||||| ||    
T  52040710 tgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactcattaatgatcaataatcattcatctagtaatgttt 52040809  T
Q  352 gcaa 355  Q
    ||||    
T  52040810 gcaa 52040813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 24707896 - 24708006
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||||||| ||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| |||||||||||| |||| ||||| ||||| |    
T  24707896 agaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgattaatagtaatttatctaat 24707995  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  24707996 aatgcttgcaa 24708006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 252 - 341
Target Start/End: Original strand, 20373051 - 20373140
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatct 341  Q
    ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  20373051 tgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatct 20373140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 223 - 355
Target Start/End: Original strand, 33378544 - 33378676
Alignment:
Q  223 tgggagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaat 322  Q
    |||||||||| ||  || ||| || ||| |||||||||||||||  |||||||| ||||||||||| | ||||||||||||| |||||||  ||||||||    
T  33378544 tgggagcttctacggtgcagtcaggaaactgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaatcgttgattattgattaat 33378643  T
Q  323 gatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||| ||||||||||||||||| ||||||    
T  33378644 gatcaatagtaattcatctagtaatgtttgcaa 33378676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 14586468 - 14586571
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||||||||||  |||||||| ||||||||||| | || |||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||    
T  14586468 tgacttttttgaaaaaattaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatgatcagtagtaatttatctagtaatgctt 14586567  T
Q  352 gcaa 355  Q
    ||||    
T  14586568 gcaa 14586571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 22445853 - 22445956
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||| ||| ||||||| ||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||    
T  22445853 tgacttttttggaaaagttaattatgatcttaatgtttgattcatatttaaattgttgattactgattaatgatcaatagtaattcatccagtaatactt 22445952  T
Q  352 gcaa 355  Q
    ||||    
T  22445953 gcaa 22445956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 354
Target Start/End: Complemental strand, 36012528 - 36012425
Alignment:
Q  252 tgacttttttgaaaaggttaa-ttttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgct 350  Q
    ||||||||||||||| ||||| |||| || |||||||| | || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36012528 tgacttttttgaaaaagttaaattttaattttaatgtttgatttatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgct 36012429  T
Q  351 tgca 354  Q
    ||||    
T  36012428 tgca 36012425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 40936365 - 40936258
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||||||||||||||| ||||||||  ||||||||| | | || |||||||||||||||||| | ||||||||||||||| ||||| ||||||||||    
T  40936365 aaattgacttttttgaaaaagttaatttcaatcttaatgattgatttatttttaaattgttgattaccgattaatgatcaatagtaatttatctagtaat 40936266  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  40936265 gcttgcaa 40936258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 2008327 - 2008217
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgtt-------gattgctgattaatgatcaatattaattcatctagt 344  Q
    ||||||||||||||| ||||||||| ||||||||||| | |||||||||||||||||       |||| |||||||||||||||||||| ||||||||||    
T  2008327 tgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattaatgattactgattaatgatcaatattatttcatctagt 2008228  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  2008227 aatgcttgcaa 2008217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 248 - 348
Target Start/End: Original strand, 27480142 - 27480242
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    ||||||| |||||| ||||   |||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  27480142 aaattgattttttttaaaaatataattttgttcttaatgttcgattcatttttaaattgttgatcgctgattaataatcaatagtaattcatctagtaat 27480241  T
Q  348 g 348  Q
    |    
T  27480242 g 27480242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 7327274 - 7327373
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||| |||| ||||||||| ||||||||  | | ||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  7327274 ttttttaaaaaagttaattttaatcttaataattgattcatttttaaattgttgattactgattaatgattaatagtaattcatctagtaatgcttgcaa 7327373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 51212558 - 51212662
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagt 344  Q
    |||||| |||| |||||||||| ||||||||||||||||||      |||||||||||||||||||||  | |||||||||||||| |||||||||||||    
T  51212558 agaaaactgacatttttgaaaaagttaattttgatcttaat------ttcatttttaaattgttgatttttaattaatgatcaatagtaattcatctagt 51212651  T
Q  345 aatgcttgcaa 355  Q
    |||||||||||    
T  51212652 aatgcttgcaa 51212662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 4761438 - 4761539
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    |||||||| |||| |||||||||||| |||||||| | |||||||| |||||||||||| |||||||||||| |||| |||||||||| |||||| ||||    
T  4761438 actttttttaaaaagttaattttgattttaatgtttgattcattttcaaattgttgatttctgattaatgattaatagtaattcatctggtaatgtttgc 4761537  T
Q  354 aa 355  Q
    ||    
T  4761538 aa 4761539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 11356946 - 11357030
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaatt 336  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||| |||| |||||    
T  11356946 tgacttttttgaaaaagttaattttgatcttaatgttggattcatttttaaattgttgattactaattaatgatgaatagtaatt 11357030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 3654980 - 3655093
Alignment:
Q  245 agaaaattgacttttttgaaaaggttaattttgatcttaatgttcggttc-atttttaaattgttgattgctgattaatgatcaatattaattc--atct 341  Q
    |||||| ||| ||||||||||| |||||||||||| |||||||| | ||  |||||||||||||||||| ||||||||| ||||||| ||||||  ||||    
T  3654980 agaaaactgatttttttgaaaatgttaattttgattttaatgtttgattttatttttaaattgttgattactgattaataatcaatagtaattcatatct 3655079  T
Q  342 agtaatgcttgcaa 355  Q
    ||||||||||||||    
T  3655080 agtaatgcttgcaa 3655093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 46994490 - 46994552
Alignment:
Q  293 tcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  46994490 tcatttttaaattgttgatttctgattaatgatcaatagtaattcatctagtaatgcttgcaa 46994552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 32373853 - 32373755
Alignment:
Q  256 ttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||| ||||||||| |||||| || |   |||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  32373853 ttttttgaaaaagttaattttaatcttattgatgaattcatttt-aaattgttgattactgattaatgatcaatagaaattcatctagtaatgcttgcaa 32373755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 24488745 - 24488853
Alignment:
Q  248 aaattgactttt-ttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaa 346  Q
    |||||||||||| || |||| ||||||||| || |||||||| | |||||||||||||| ||||||  ||||| ||||| |||| |||| ||||||||||    
T  24488745 aaattgacttttatttaaaaagttaattttaatattaatgtttgattcatttttaaattattgattattgattcatgattaatagtaatgcatctagtaa 24488844  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  24488845 tgcttgcaa 24488853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 50475199 - 50475096
Alignment:
Q  259 tttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaa-------tgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||  ||||||||||| |||||||| | |||||||||||||| |||||| ||||||||       ||||||||| ||||||||||||||||||||    
T  50475199 tttgaaaaatttaattttgattttaatgtttgattcatttttaaattattgattactgattaatgattaatgatcaatactaattcatctagtaatgctt 50475100  T
Q  352 gcaa 355  Q
    ||||    
T  50475099 gcaa 50475096  T

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Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 352
Target Start/End: Complemental strand, 29164190 - 29164097
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    |||||||| | |||| ||||||||| ||||||||||| | || ||||||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  29164190 tgacttttctaaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgatt-------aatgatcaatagtaattcatctagtaatgctt 29164098  T

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Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 34133283 - 34133220
Alignment:
Q  292 ttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||||| | |||| ||||| | || ||||||||||||||||||||||||    
T  34133283 ttcatttttaaattgttgattaccgattcatgattactagtaattcatctagtaatgcttgcaa 34133220  T

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Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 38592046 - 38591983
Alignment:
Q  292 ttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||  | || ||||||||||||    
T  38592046 ttcatttttaaattgttgattactgattaatgatcaatagtaatttgtttaataatgcttgcaa 38591983  T

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Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 35844639 - 35844577
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttga 310  Q
    ||||||||||||||||||| ||||||||| || |||||||| | || ||||||||||||||||    
T  35844639 aaattgacttttttgaaaaagttaattttaattttaatgtttgatttatttttaaattgttga 35844577  T

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Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 11467198 - 11467138
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgatt 312  Q
    ||||||||||||||| |||||||||  |||||||| | | |||||||||||||||||||||    
T  11467198 tgacttttttgaaaaagttaattttattcttaatgattgattcatttttaaattgttgatt 11467138  T

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Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 54828546 - 54828592
Alignment:
Q  309 gattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  54828546 gattactgattaatgatcaatagtaatttatctagtaatgcttgcaa 54828592  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 36806103 - 36806159
Alignment:
Q  24 tattggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggta 80  Q
    ||||||||  ||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  36806103 tattggaatagaagttatggagctgatcatttcatgctttcttgtcatgattgggta 36806159  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 49301577 - 49301631
Alignment:
Q  27 tggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggtaa 81  Q
    |||||| ||| |||||| ||||| || ||||| ||||||||||||||||||||||    
T  49301577 tggaacagaactcatggtgctgaccacttcatgcttgcttgccatgattgggtaa 49301631  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 13498731 - 13498678
Alignment:
Q  226 gagcttccacactggagttagaaaattgacttttttgaaaaggttaattttgat 279  Q
    ||||||| ||| || ||| ||||||||||||||||| |||| ||||||||||||    
T  13498731 gagcttctacagtgtagtcagaaaattgacttttttaaaaaagttaattttgat 13498678  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 34133357 - 34133312
Alignment:
Q  241 agttagaaaattgacttttttgaaaaggttaattttgatcttaatg 286  Q
    |||||| ||| ||||||||||||||| ||||||||| |||||||||    
T  34133357 agttaggaaactgacttttttgaaaaagttaattttaatcttaatg 34133312  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 36515123 - 36515067
Alignment:
Q  24 tattggaaccgaagtcatggagctgatcatttcatacttgcttgccatgattgggta 80  Q
    ||||||||  ||||| |||||||||| |||||||| ||| |||| ||||||||||||    
T  36515123 tattggaatagaagttatggagctgaccatttcatgctttcttgtcatgattgggta 36515067  T

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Target: scaffold0291 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 8288 - 8181
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaat 347  Q
    |||||||||||||||| || |||||||||||| |||| | | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8288 aaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaat 8189  T
Q  348 gcttgcaa 355  Q
    ||||||||    
T  8188 gcttgcaa 8181  T

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Target: scaffold0318 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 355
Target Start/End: Complemental strand, 12303 - 12203
Alignment:
Q  254 acttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgc 353  Q
    |||||||| |||| ||||||||| ||||||||||| | || |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  12303 acttttttaaaaaagttaattttaatcttaatgtttgatt-atttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgc 12205  T
Q  354 aa 355  Q
    ||    
T  12204 aa 12203  T

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Target: scaffold0002 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 408223 - 408320
Alignment:
Q  258 ttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    |||||||||  |||||||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  408223 ttttgaaaaaattaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaa 408320  T

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Target: scaffold0002; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 517 - 422
Alignment:
Q  260 ttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  517 ttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaatagtaattcatctagtaatgcttgcaa 422  T

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Target: scaffold0002; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 93894 - 93991
Alignment:
Q  257 tttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgcttgcaa 355  Q
    ||||| |||| |||||||||||| |||||||| | |||||||| ||||||||||||  ||||||||||||||||  |||||||||||||||||||||||    
T  93894 tttttaaaaaagttaattttgattttaatgtttgattcatttt-aaattgttgattagtgattaatgatcaatagcaattcatctagtaatgcttgcaa 93991  T

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Target: scaffold0061 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 44353 - 44250
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||| |||||||| ||||||||   ||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||    
T  44353 tgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgttgattactgattaatgatcaatagtaattcattcagtaatgctt 44254  T
Q  352 gcaa 355  Q
    ||||    
T  44253 gcaa 44250  T

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Target: scaffold0017 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 154434 - 154537
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatattaattcatctagtaatgctt 351  Q
    ||||||||||||||| ||| |||||||| ||||||||   ||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||    
T  154434 tgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgttgattactgattaatgatcaatagtaattcattcagtaatgctt 154533  T
Q  352 gcaa 355  Q
    ||||    
T  154534 gcaa 154537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 145799 - 145907
Alignment:
Q  248 aaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatgatcaatatta-attcatctagtaa 346  Q
    ||||||||||||||||||| |||||||||||| ||||||||   |||||||||||||| || ||| ||||||||||||||||  || |||||| ||||||    
T  145799 aaattgacttttttgaaaaagttaattttgattttaatgtttaattcatttttaaattttttattactgattaatgatcaattgtatattcatttagtaa 145898  T
Q  347 tgcttgcaa 355  Q
    |||||||||    
T  145899 tgcttgcaa 145907  T

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Target: scaffold0008 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 267673 - 267606
Alignment:
Q  252 tgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgatt 319  Q
    |||||||||||||||  ||||||||||||||||| || | ||||||||||||||||||||| ||||||    
T  267673 tgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaattgttgattactgatt 267606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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