View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19971_low_4 (Length: 621)
Name: NF19971_low_4
Description: NF19971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19971_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 94 - 621
Target Start/End: Original strand, 29959662 - 29960178
Alignment:
| Q |
94 |
agtctacgagatcactgtcaaaatttaattatcagtatgatgcaattttctttttcagtgtgattattatcaaggtacagcaaaagaacaacaatgtccc |
193 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29959662 |
agtctacgagatcactgtcaaaatttaattatcaatgtgatgcaattttctttttcagtgtgattattatcaaggtacagcaaaagaacaacaatgtccc |
29959761 |
T |
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| Q |
194 |
agacggcaagaaaagctcccaagaaagtcaattccattgatgtaagaccaaccatatatagttttaccaatgtgtaccaattaaagatcatcgatataaa |
293 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29959762 |
agacggcaagaaaagctcccaagaaagtcaattccgttgatgtaagaccaaccatatatagttttaccaatgtgtaccaattaaagatcatcgatataaa |
29959861 |
T |
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| Q |
294 |
actgtcggtttaaatattgctaggtaaaaatgaagacaatgtgaatctagacatgtaattcaattaaaaatactagctagtcgatatgtacattttgtgg |
393 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
29959862 |
actgtcggtttaaatattgctatgtaaaaatgaagacaatgtgaatctagacatgtaattcaatgaaaaatactagctagtaaatatgtacattttgtgg |
29959961 |
T |
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| Q |
394 |
gtcactctattgtccccctttcagggtagaaaatgacttcaactgaaagtttagtgccttttaatccgattcacacttgacccaattaaaaatagcttct |
493 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
29959962 |
gtcactctattgtccccctttcagggtagaaaatgacttca-----------agtgccttttaatccgattcacacttgacccaattaataatagcttct |
29960050 |
T |
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| Q |
494 |
attcaaatgtaaccacatatctaaaattggaaaactatcttctctagaaaatttaatttctttagtactatacaatgcatgcaatgcaaccacgtacgta |
593 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
29960051 |
attcaaatgtaaccacatatctaaaattggaaaactatcttctctaggaaatttaatttctttagtactatagaatgcatgcaatgcaaccacgtacgta |
29960150 |
T |
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| Q |
594 |
gtccagaaaatgaatacaaaatatagac |
621 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
29960151 |
gtccagaaaatgaatacaaaatatagac |
29960178 |
T |
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