View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19972_low_17 (Length: 236)

Name: NF19972_low_17
Description: NF19972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19972_low_17
NF19972_low_17
[»] chr6 (36 HSPs)
chr6 (20-222)||(7076702-7076904)
chr6 (26-85)||(2304734-2304793)
chr6 (26-85)||(8693550-8693609)
chr6 (23-85)||(31705328-31705390)
chr6 (28-85)||(4393938-4393995)
chr6 (132-199)||(3359049-3359116)
chr6 (26-85)||(4921777-4921836)
chr6 (26-85)||(6296145-6296204)
chr6 (26-85)||(6302955-6303014)
chr6 (26-85)||(19402706-19402765)
chr6 (26-85)||(31937316-31937375)
chr6 (142-220)||(4660743-4660821)
chr6 (120-196)||(8632956-8633032)
chr6 (143-199)||(12343499-12343555)
chr6 (23-71)||(29284916-29284964)
chr6 (120-191)||(7049523-7049594)
chr6 (26-85)||(12481266-12481325)
chr6 (120-199)||(12654067-12654146)
chr6 (26-85)||(23654416-23654475)
chr6 (53-100)||(34503784-34503831)
chr6 (26-84)||(6419755-6419813)
chr6 (142-199)||(1106616-1106673)
chr6 (142-199)||(8693420-8693477)
chr6 (142-199)||(8978505-8978562)
chr6 (41-94)||(8978627-8978680)
chr6 (142-199)||(15176106-15176163)
chr6 (142-199)||(23101157-23101214)
chr6 (142-199)||(34020903-34020960)
chr6 (163-199)||(4921651-4921687)
chr6 (119-199)||(8644505-8644585)
chr6 (25-89)||(12156301-12156365)
chr6 (26-82)||(13871519-13871575)
chr6 (26-82)||(15590007-15590063)
chr6 (129-197)||(20845295-20845363)
chr6 (26-82)||(23101307-23101363)
chr6 (26-82)||(35219812-35219868)
[»] chr4 (57 HSPs)
chr4 (23-100)||(24789352-24789429)
chr4 (23-100)||(24818830-24818907)
chr4 (25-108)||(5814511-5814594)
chr4 (20-94)||(2447960-2448034)
chr4 (26-85)||(32616755-32616814)
chr4 (23-85)||(31522109-31522171)
chr4 (142-199)||(46829707-46829764)
chr4 (142-199)||(56172128-56172185)
chr4 (26-94)||(29268664-29268732)
chr4 (26-85)||(394170-394229)
chr4 (26-85)||(7861102-7861161)
chr4 (26-85)||(13586136-13586195)
chr4 (26-85)||(42197719-42197778)
chr4 (26-85)||(50801383-50801442)
chr4 (26-85)||(53647798-53647857)
chr4 (23-94)||(56062152-56062223)
chr4 (125-199)||(6082188-6082262)
chr4 (27-85)||(6911847-6911905)
chr4 (23-85)||(24611696-24611757)
chr4 (142-199)||(11210062-11210119)
chr4 (142-199)||(31932562-31932619)
chr4 (26-87)||(36124242-36124303)
chr4 (28-85)||(45350966-45351023)
chr4 (28-85)||(45360445-45360502)
chr4 (26-94)||(477899-477967)
chr4 (26-106)||(8712696-8712776)
chr4 (26-74)||(11210220-11210268)
chr4 (38-86)||(12754341-12754389)
chr4 (142-222)||(26623939-26624019)
chr4 (142-190)||(33020693-33020741)
chr4 (26-82)||(43244280-43244336)
chr4 (31-94)||(626437-626500)
chr4 (26-85)||(7060489-7060548)
chr4 (26-85)||(12717013-12717072)
chr4 (26-85)||(13965726-13965785)
chr4 (143-222)||(15182775-15182854)
chr4 (26-85)||(24825815-24825874)
chr4 (26-85)||(27394996-27395055)
chr4 (26-85)||(38944044-38944103)
chr4 (27-85)||(22757261-22757319)
chr4 (26-80)||(43278100-43278154)
chr4 (28-82)||(43493186-43493240)
chr4 (142-199)||(394023-394080)
chr4 (142-199)||(7060629-7060686)
chr4 (142-199)||(8712822-8712879)
chr4 (142-199)||(20399652-20399709)
chr4 (142-199)||(20887506-20887563)
chr4 (166-199)||(24568464-24568497)
chr4 (142-199)||(25658482-25658539)
chr4 (142-199)||(46267981-46268038)
chr4 (142-199)||(51152430-51152487)
chr4 (41-106)||(56236697-56236762)
chr4 (28-100)||(7454794-7454866)
chr4 (142-186)||(9255073-9255117)
chr4 (26-82)||(20399802-20399858)
chr4 (132-200)||(22121733-22121801)
chr4 (25-85)||(24100305-24100365)
[»] chr8 (42 HSPs)
chr8 (23-82)||(3204692-3204751)
chr8 (27-85)||(31202625-31202683)
chr8 (26-85)||(43937081-43937140)
chr8 (23-85)||(14600602-14600664)
chr8 (38-100)||(19489007-19489069)
chr8 (142-199)||(24790925-24790982)
chr8 (26-94)||(10633076-10633144)
chr8 (26-85)||(7579759-7579818)
chr8 (26-85)||(10338726-10338785)
chr8 (26-85)||(37612819-37612878)
chr8 (125-199)||(10148234-10148308)
chr8 (27-85)||(13570643-13570701)
chr8 (27-85)||(31407652-31407710)
chr8 (28-106)||(32778840-32778918)
chr8 (142-199)||(27534169-27534226)
chr8 (26-83)||(30026788-30026845)
chr8 (142-199)||(41362047-41362104)
chr8 (26-85)||(2025128-2025187)
chr8 (26-85)||(2234374-2234433)
chr8 (26-85)||(4757331-4757390)
chr8 (77-199)||(5989847-5989970)
chr8 (26-85)||(13576098-13576157)
chr8 (144-199)||(23970940-23970995)
chr8 (30-85)||(24700002-24700057)
chr8 (26-85)||(37128391-37128450)
chr8 (26-85)||(39067593-39067652)
chr8 (30-85)||(41361902-41361957)
chr8 (26-72)||(1039811-1039857)
chr8 (142-220)||(14600434-14600512)
chr8 (125-199)||(31202747-31202821)
chr8 (142-199)||(1809979-1810036)
chr8 (142-199)||(10338588-10338645)
chr8 (142-199)||(11162201-11162258)
chr8 (142-199)||(20993107-20993164)
chr8 (142-199)||(21471861-21471918)
chr8 (142-199)||(37612951-37613008)
chr8 (142-199)||(39067447-39067504)
chr8 (120-197)||(41996821-41996898)
chr8 (26-82)||(9501752-9501808)
chr8 (143-199)||(10952053-10952109)
chr8 (143-199)||(10960058-10960114)
chr8 (30-94)||(32726606-32726670)
[»] chr7 (56 HSPs)
chr7 (26-97)||(37714645-37714716)
chr7 (142-199)||(4621129-4621186)
chr7 (27-100)||(6496059-6496132)
chr7 (142-214)||(6646343-6646415)
chr7 (26-85)||(28664837-28664896)
chr7 (142-220)||(6667710-6667788)
chr7 (23-85)||(11833181-11833243)
chr7 (23-85)||(48304289-48304351)
chr7 (27-100)||(39707452-39707524)
chr7 (23-83)||(4028344-4028404)
chr7 (29-85)||(39532871-39532927)
chr7 (26-85)||(1281033-1281092)
chr7 (26-85)||(9719869-9719928)
chr7 (26-85)||(21603626-21603685)
chr7 (26-85)||(24320119-24320178)
chr7 (23-94)||(27535591-27535662)
chr7 (28-94)||(2622760-2622826)
chr7 (23-85)||(3266549-3266611)
chr7 (23-85)||(9785480-9785542)
chr7 (26-100)||(43256431-43256505)
chr7 (23-85)||(45457452-45457514)
chr7 (125-190)||(3266675-3266740)
chr7 (39-100)||(10623977-10624038)
chr7 (142-199)||(37375804-37375861)
chr7 (142-199)||(46025804-46025861)
chr7 (128-185)||(47295493-47295550)
chr7 (142-199)||(47300596-47300653)
chr7 (26-82)||(10094607-10094663)
chr7 (120-196)||(11002121-11002197)
chr7 (41-101)||(22493215-22493275)
chr7 (26-85)||(24988376-24988435)
chr7 (23-94)||(27050350-27050421)
chr7 (26-85)||(41288122-41288181)
chr7 (26-85)||(45482230-45482289)
chr7 (26-85)||(46025925-46025984)
chr7 (26-100)||(5238119-5238193)
chr7 (142-220)||(9137256-9137334)
chr7 (26-100)||(25112678-25112752)
chr7 (124-198)||(29352508-29352582)
chr7 (125-199)||(32741041-32741115)
chr7 (142-199)||(2622907-2622964)
chr7 (142-199)||(17473510-17473567)
chr7 (142-199)||(17508953-17509010)
chr7 (142-199)||(17544204-17544261)
chr7 (142-199)||(17579647-17579704)
chr7 (25-82)||(21954717-21954774)
chr7 (142-199)||(21990977-21991034)
chr7 (142-199)||(22747258-22747315)
chr7 (142-199)||(27535743-27535800)
chr7 (142-199)||(42644970-42645027)
chr7 (120-197)||(47750012-47750089)
chr7 (142-199)||(48304141-48304198)
chr7 (26-82)||(6667561-6667617)
chr7 (129-197)||(18753982-18754050)
chr7 (26-66)||(27704985-27705025)
chr7 (26-106)||(29352392-29352472)
[»] chr3 (46 HSPs)
chr3 (27-108)||(31730811-31730892)
chr3 (28-94)||(40013167-40013233)
chr3 (142-199)||(3457237-3457294)
chr3 (26-82)||(53155337-53155393)
chr3 (26-85)||(22485131-22485190)
chr3 (26-85)||(54706619-54706678)
chr3 (26-85)||(55455031-55455090)
chr3 (26-100)||(3961651-3961725)
chr3 (142-220)||(47587109-47587187)
chr3 (142-220)||(48855192-48855270)
chr3 (142-199)||(30156047-30156104)
chr3 (142-199)||(31462512-31462569)
chr3 (26-87)||(36691701-36691762)
chr3 (125-222)||(40702718-40702815)
chr3 (31-84)||(48822245-48822298)
chr3 (142-199)||(54706489-54706546)
chr3 (26-82)||(1074801-1074857)
chr3 (26-82)||(3457105-3457161)
chr3 (26-82)||(13701908-13701964)
chr3 (26-82)||(35174874-35174930)
chr3 (26-85)||(14585628-14585687)
chr3 (120-199)||(33637687-33637766)
chr3 (26-85)||(36624599-36624658)
chr3 (23-106)||(47733760-47733843)
chr3 (26-85)||(48652344-48652403)
chr3 (26-85)||(48855043-48855102)
chr3 (26-85)||(49627999-49628058)
chr3 (26-85)||(53962284-53962343)
chr3 (142-220)||(105783-105861)
chr3 (142-220)||(22485280-22485358)
chr3 (27-85)||(31462650-31462708)
chr3 (23-105)||(48212503-48212585)
chr3 (38-99)||(5327363-5327424)
chr3 (142-199)||(13701759-13701816)
chr3 (163-220)||(25373830-25373887)
chr3 (125-190)||(31550211-31550276)
chr3 (142-199)||(38530239-38530296)
chr3 (142-199)||(40013029-40013086)
chr3 (142-191)||(41598241-41598290)
chr3 (120-197)||(50520061-50520138)
chr3 (142-199)||(53155187-53155244)
chr3 (26-82)||(105942-105998)
chr3 (27-87)||(19861181-19861241)
chr3 (120-220)||(28995045-28995145)
chr3 (38-86)||(38528665-38528713)
chr3 (26-82)||(53402787-53402843)
[»] chr1 (44 HSPs)
chr1 (33-106)||(31427025-31427098)
chr1 (123-199)||(40862583-40862659)
chr1 (20-96)||(8737510-8737586)
chr1 (23-94)||(38783230-38783301)
chr1 (27-85)||(4882255-4882313)
chr1 (28-85)||(9298312-9298369)
chr1 (142-199)||(37662656-37662713)
chr1 (23-103)||(10304741-10304821)
chr1 (26-82)||(44517313-44517369)
chr1 (142-220)||(9298159-9298237)
chr1 (142-204)||(38783367-38783429)
chr1 (23-85)||(42491056-42491118)
chr1 (142-199)||(424041-424098)
chr1 (26-87)||(424185-424246)
chr1 (142-199)||(3233086-3233143)
chr1 (142-199)||(7995326-7995383)
chr1 (26-87)||(17347763-17347824)
chr1 (142-199)||(20413098-20413155)
chr1 (23-80)||(32301501-32301558)
chr1 (26-82)||(15391151-15391207)
chr1 (25-89)||(39080807-39080871)
chr1 (25-100)||(13999131-13999206)
chr1 (26-85)||(14265450-14265509)
chr1 (26-97)||(32784245-32784316)
chr1 (26-85)||(32878874-32878933)
chr1 (26-85)||(37822242-37822300)
chr1 (26-85)||(45750644-45750703)
chr1 (38-108)||(25032961-25033031)
chr1 (38-100)||(29069722-29069784)
chr1 (142-200)||(29205583-29205641)
chr1 (129-191)||(29802897-29802959)
chr1 (29-106)||(3101836-3101913)
chr1 (23-100)||(12871784-12871861)
chr1 (142-199)||(29726346-29726403)
chr1 (159-200)||(30678572-30678613)
chr1 (120-185)||(32878986-32879051)
chr1 (142-199)||(34566981-34567038)
chr1 (28-85)||(42276523-42276580)
chr1 (142-199)||(45750793-45750850)
chr1 (26-82)||(7995459-7995515)
chr1 (120-220)||(12871899-12871999)
chr1 (56-108)||(13152636-13152688)
chr1 (120-196)||(21326751-21326827)
chr1 (26-82)||(33486929-33486985)
[»] chr5 (39 HSPs)
chr5 (28-85)||(7771717-7771774)
chr5 (26-85)||(11858076-11858135)
chr5 (23-85)||(25962082-25962144)
chr5 (142-199)||(12524421-12524478)
chr5 (28-85)||(12891844-12891901)
chr5 (27-82)||(374449-374504)
chr5 (26-85)||(980925-980984)
chr5 (26-85)||(6635414-6635473)
chr5 (120-199)||(20145976-20146055)
chr5 (26-85)||(20483352-20483411)
chr5 (125-199)||(20187388-20187462)
chr5 (27-85)||(23882012-23882070)
chr5 (142-199)||(17732135-17732192)
chr5 (142-199)||(20483501-20483558)
chr5 (142-199)||(25962219-25962276)
chr5 (34-87)||(35402209-35402262)
chr5 (142-199)||(39416015-39416072)
chr5 (119-199)||(11734594-11734674)
chr5 (28-80)||(17732287-17732339)
chr5 (124-220)||(42505139-42505235)
chr5 (26-85)||(6281210-6281269)
chr5 (23-66)||(6681791-6681834)
chr5 (120-199)||(29098073-29098152)
chr5 (26-85)||(32347610-32347669)
chr5 (26-85)||(33164364-33164423)
chr5 (23-100)||(18573482-18573560)
chr5 (23-85)||(23428415-23428477)
chr5 (123-184)||(9406394-9406455)
chr5 (142-199)||(12439438-12439495)
chr5 (23-108)||(14535061-14535146)
chr5 (146-191)||(17325427-17325472)
chr5 (142-203)||(28040944-28041005)
chr5 (142-199)||(39179594-39179651)
chr5 (142-199)||(39531161-39531218)
chr5 (31-100)||(39915664-39915733)
chr5 (142-199)||(40564914-40564971)
chr5 (26-94)||(17331494-17331562)
chr5 (142-222)||(25770906-25770986)
chr5 (30-82)||(43494030-43494082)
[»] scaffold0542 (1 HSPs)
scaffold0542 (23-106)||(3945-4028)
[»] chr2 (61 HSPs)
chr2 (26-85)||(18089293-18089352)
chr2 (23-82)||(36868171-36868230)
chr2 (23-85)||(5754451-5754513)
chr2 (26-108)||(27666376-27666458)
chr2 (30-107)||(19904678-19904755)
chr2 (26-94)||(9978556-9978624)
chr2 (26-85)||(4426554-4426613)
chr2 (26-85)||(4732236-4732295)
chr2 (26-85)||(10286903-10286962)
chr2 (26-85)||(32314608-32314667)
chr2 (30-105)||(34471136-34471211)
chr2 (26-85)||(43474024-43474083)
chr2 (27-89)||(11561564-11561625)
chr2 (125-199)||(11798286-11798360)
chr2 (23-85)||(12891014-12891076)
chr2 (27-100)||(13548782-13548855)
chr2 (27-100)||(17792641-17792714)
chr2 (26-83)||(22597301-22597358)
chr2 (20-85)||(28230993-28231058)
chr2 (142-199)||(32314740-32314797)
chr2 (142-199)||(36868323-36868380)
chr2 (26-94)||(6510648-6510716)
chr2 (26-82)||(9689884-9689940)
chr2 (125-185)||(16720619-16720679)
chr2 (38-106)||(20598542-20598610)
chr2 (26-82)||(33012214-33012270)
chr2 (38-85)||(13878905-13878952)
chr2 (38-85)||(14019030-14019077)
chr2 (146-209)||(17118561-17118624)
chr2 (27-82)||(26254835-26254890)
chr2 (26-85)||(34962972-34963031)
chr2 (26-85)||(35333671-35333730)
chr2 (26-85)||(38384353-38384412)
chr2 (26-96)||(823843-823913)
chr2 (27-85)||(4739496-4739554)
chr2 (28-94)||(8531449-8531515)
chr2 (23-73)||(12994120-12994170)
chr2 (122-184)||(15920154-15920216)
chr2 (26-100)||(40039189-40039263)
chr2 (27-85)||(43696035-43696093)
chr2 (142-199)||(4426408-4426465)
chr2 (28-85)||(6431298-6431355)
chr2 (39-80)||(6593416-6593457)
chr2 (142-199)||(7072723-7072780)
chr2 (142-199)||(9689734-9689791)
chr2 (25-94)||(13740547-13740616)
chr2 (168-209)||(17056216-17056257)
chr2 (168-209)||(17068663-17068704)
chr2 (168-209)||(17095233-17095274)
chr2 (142-199)||(27096004-27096061)
chr2 (142-199)||(33012363-33012420)
chr2 (142-191)||(34416520-34416569)
chr2 (142-199)||(34471275-34471332)
chr2 (26-83)||(38535203-38535260)
chr2 (142-199)||(44942601-44942658)
chr2 (142-198)||(11937616-11937672)
chr2 (26-82)||(12704853-12704909)
chr2 (142-185)||(15028098-15028139)
chr2 (142-199)||(29938584-29938643)
chr2 (142-214)||(40039057-40039129)
chr2 (26-82)||(44942452-44942508)
[»] scaffold0112 (1 HSPs)
scaffold0112 (142-200)||(25268-25326)
[»] scaffold0321 (1 HSPs)
scaffold0321 (142-199)||(6879-6936)
[»] scaffold0312 (2 HSPs)
scaffold0312 (26-87)||(6303-6364)
scaffold0312 (142-199)||(6451-6508)
[»] scaffold1350 (1 HSPs)
scaffold1350 (26-85)||(1740-1799)
[»] scaffold1379 (1 HSPs)
scaffold1379 (28-82)||(143-197)
[»] scaffold0999 (1 HSPs)
scaffold0999 (142-199)||(2004-2061)
[»] scaffold0580 (4 HSPs)
scaffold0580 (142-191)||(557-606)
scaffold0580 (23-100)||(663-740)
scaffold0580 (142-191)||(8296-8345)
scaffold0580 (23-100)||(8402-8479)
[»] scaffold0294 (1 HSPs)
scaffold0294 (142-199)||(3816-3873)
[»] scaffold0288 (1 HSPs)
scaffold0288 (142-199)||(20908-20965)
[»] scaffold0202 (1 HSPs)
scaffold0202 (28-89)||(22518-22579)
[»] scaffold0121 (1 HSPs)
scaffold0121 (26-82)||(13144-13200)
[»] scaffold0045 (1 HSPs)
scaffold0045 (120-192)||(9422-9494)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 20 - 222
Target Start/End: Original strand, 7076702 - 7076904
Alignment:
Q  20 atatctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcatagacattgaaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7076702 atatctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcaaattcaaccaataactttagcgtcatagacattgaaa 7076801  T
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattt 219  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7076802 tccgaagacttaaatatagctttatttgtaggcatgtgtacactgtcattttatgctattaacatgaatgttttgagtttactcggagatccatccattt 7076901  T
Q  220 tat 222  Q
    |||    
T  7076902 tat 7076904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 2304793 - 2304734
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||||||||||||||| | || |||||||||||| |||||| |||||||||||    
T  2304793 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 2304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 8693609 - 8693550
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||||||||||||||| | || |||||||||||| |||||| |||||||||||    
T  8693609 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 8693550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 31705328 - 31705390
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  31705328 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagtgcagat 31705390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 4393938 - 4393995
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| |||||||||||   || |||||||||||||||||||||||||||||||    
T  4393938 tcttagtgcggtgtttatttgactcaggttgaaagattaactttgatcaagtgcagat 4393995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 3359049 - 3359116
Alignment:
Q  132 aatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||| | |||||||||||||||||||| || |  ||||||||||||||||||||||  |||||||    
T  3359049 aatatagttatatttgtaggcatatgtacaatgccgctttatgctattaacatgaatgtcgtgagttt 3359116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 4921836 - 4921777
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||| ||| ||||||||||| |||| |||||||||||| |||||| |||||||||||    
T  4921836 cgtcttactgcggtgtttatttgatccaggttgaaagattagctttgagcaagtgcagat 4921777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 6296204 - 6296145
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||||||||||||||| | || ||| ||||||||||||||| ||| |||||||    
T  6296204 cgtcttagtgcagtgtttatttgattcaggttaaaagattaactttgagcaaatgcagat 6296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 6303014 - 6302955
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||||||||||||||| | || ||| ||||||||||||||| ||| |||||||    
T  6303014 cgtcttagtgcagtgtttatttgattcaggttaaaagattaactttgagcaaatgcagat 6302955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 19402765 - 19402706
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  19402765 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 19402706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 31937375 - 31937316
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  31937375 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagtgcagat 31937316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 4660743 - 4660821
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||| | |||||||  || ||||| ||||| ||||    
T  4660743 tatttgtaggcatatgtactttgtcgttttatgctattaacatggatgatgtgagtttgttcatagattcatccttttt 4660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 8633032 - 8632956
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgag 196  Q
    |||| ||| ||||||||||   ||| ||||||||| |||||  |||||||| |||||||||||||||||||| ||||    
T  8633032 tccggagatttaaatatagtcatatgtgtaggcatttgtactttgtcatttcatgctattaacatgaatgttgtgag 8632956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 12343499 - 12343555
Alignment:
Q  143 atttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||| ||||| |||| ||| |||||||||||||||||||| || ||||||||||    
T  12343499 atttgtaagcataggtactctgccattttatgctattaacatggatattttgagttt 12343555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 29284916 - 29284964
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaacttt 71  Q
    |||||||||||||| ||||||||||| | ||||||||||||||| ||||    
T  29284916 tctcgtcttagtgcggtgtttatttgattcaagttgaaagattagcttt 29284964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 7049523 - 7049594
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    |||||||| ||||||||||   ||| ||||||||| |||||  |||| |||||||||||||||||| |||||    
T  7049523 tccgaagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatggatgtt 7049594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 12481325 - 12481266
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| |  | ||||||||||||||||||| |||| ||||||    
T  12481325 cgtcttagtgcggtgtttatttgatttaggttgaaagattaactttgaacaagagcagat 12481266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 12654146 - 12654067
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| |||||| |||||||   ||||||||||||||||||   |||| |||||||||||||||||| ||| | |||||||    
T  12654146 tccggagacttgaatatagtcatatttgtaggcatatgtattttgtcgttttatgctattaacatggatgatgtgagttt 12654067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 23654416 - 23654475
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||| ||||||    
T  23654416 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagagcagat 23654475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 34503831 - 34503784
Alignment:
Q  53 aagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||||| ||||| ||||||||||| |||||| ||||||||||    
T  34503831 aagttgaaagataaacttcgatcaagtgcaaattcaatcaataacttt 34503784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 6419813 - 6419755
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcaga 84  Q
    |||||||||||| |||||||||| | || |||||||||||| ||||||  |||||||||    
T  6419813 cgtcttagtgcaatgtttatttggttcaggttgaaagattagctttgagtaagtgcaga 6419755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 1106673 - 1106616
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||| | |||||||    
T  1106673 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgatgtgagttt 1106616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 8693477 - 8693420
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  8693477 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 8693420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 8978562 - 8978505
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| ||||||| ||| |||||| ||||| |||||||    
T  8978562 tatttgtaggcatatgtactatgtcgttttatgttatgaacatggatgttgtgagttt 8978505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 8978680 - 8978627
Alignment:
Q  41 tttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||||||| || ||||||||||||||  |||||||||||||| |||||| ||||    
T  8978680 tttatttgatcaaagttgaaagattagttttgatcaagtgcatattcaatcaat 8978627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 15176106 - 15176163
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||| |||||||| ||  | ||||||| |||||||||||||||| |||||||    
T  15176106 tatttgtaggaatatgtactctaccgttttatgatattaacatgaatgttatgagttt 15176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 23101214 - 23101157
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||| |||||  || | |||||||||||||||||| ||||| |||||||    
T  23101214 tatttgtaggcatgtgtactttgccgttttatgctattaacatggatgttgtgagttt 23101157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 34020903 - 34020960
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||| |||||||  |||| |||||||||||||||||| ||| | |||||||    
T  34020903 tatttgtaggcttatgtactttgtcgttttatgctattaacatgtatgatgtgagttt 34020960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 4921687 - 4921651
Alignment:
Q  163 tgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| |||||||||||||||||||||||| |||||||    
T  4921687 tgtcgttttatgctattaacatgaatgttatgagttt 4921651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 8644505 - 8644585
Alignment:
Q  119 atccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||| |||||| |||||||   ||| ||||||| | |||||  |||| |||||||||||||||||| ||||| |||||||    
T  8644505 atccggagactttaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggatgttgtgagttt 8644585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 12156301 - 12156365
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaa 89  Q
    |||||||||||| || |||||||| | || ||||||||| ||| ||||| |||||||| ||||||    
T  12156301 tcgtcttagtgcggtatttatttgattcaggttgaaagactaagtttgaacaagtgcatattcaa 12156365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 13871575 - 13871519
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||||||||||||||| | || |||| ||||||  |||||| ||||||||    
T  13871575 cgtcttagtgcagtgtttatttgattcaggttggaagatttgctttgagcaagtgca 13871519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15590063 - 15590007
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||| ||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  15590063 cgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgca 15590007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 20845295 - 20845363
Alignment:
Q  129 ttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagt 197  Q
    ||||||||||   ||||||||| ||| |||||  |||| |||||||||||||||||| ||||| |||||    
T  20845295 ttaaatatagtcatatttgtagacatttgtactttgtcgttttatgctattaacatggatgttgtgagt 20845363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 23101363 - 23101307
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||| |||| || |||||||| | || ||||||||||||||||||| ||||||||    
T  23101363 cgtctttgtgcggtatttatttgattcaggttgaaagattaactttgagcaagtgca 23101307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 35219868 - 35219812
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | || ||||||| |||| |||||| ||||||||    
T  35219868 cgtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgagcaagtgca 35219812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 24789352 - 24789429
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||||||||||||||||||| | || |||||||||||| |||||||||| |||||||||||||||| |||||    
T  24789352 tctcgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgatcaaatgcagattcaaccaatgacttt 24789429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 24818907 - 24818830
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||||||||||||||||||| | || |||||||||||| |||||||||| |||||||||||||||| |||||    
T  24818907 tctcgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgatcaaatgcagattcaaccaatgacttt 24818830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 5814511 - 5814594
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcat 108  Q
    |||||||||||||||||||||||| | || |||||||||||| |||||| ||||||||||||| | |||| ||||| |||||||    
T  5814511 tcgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagattcgatcaatgactttggcgtcat 5814594  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 2447960 - 2448034
Alignment:
Q  20 atatctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||| ||||||||||| ||||||||||| |  | ||||||||||||||||||| ||||||||||||||| ||||    
T  2447960 atatcccgtcttagtgcggtgtttatttgatttatgttgaaagattaactttgagcaagtgcagattcaatcaat 2448034  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 32616814 - 32616755
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  32616814 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagat 32616755  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 31522109 - 31522171
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||||||||||||||| | || ||||||||||||  ||||| |||||||||||    
T  31522109 tctcgtcttagtgcagtgtttatttgattcaggttgaaagattagttttgagcaagtgcagat 31522171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 46829707 - 46829764
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||| |||  |||||||||||| |||||||||||||||| |||||||    
T  46829707 tatttgtaggcatatatactatgtcattttatgttattaacatgaatgttgtgagttt 46829764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 56172128 - 56172185
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| ||||| |||||||    
T  56172128 tatttgtaggcatatgtacattgtcgttttatgttattaacatggatgttgtgagttt 56172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 29268732 - 29268664
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||| ||||||||||| | || ||||||||||| |||||||  |||||||||| ||||||||    
T  29268732 cgtcttagtgcggtgtttatttgattcaggttgaaagattgactttgaggaagtgcagatccaaccaat 29268664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 394229 - 394170
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||||| |||||| ||||    
T  394229 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgtagat 394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 7861161 - 7861102
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||| | |||||||||||    
T  7861161 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttaagcaagtgcagat 7861102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 13586195 - 13586136
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  13586195 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 13586136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 42197719 - 42197778
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  42197719 cgtcttagtgcggtgtttatttgattcaggttgaaagattatctttgagcaagtgcagat 42197778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 50801383 - 50801442
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  50801383 cgtcttagtgctgtgtttatttgattcaggttgaaagattaattttgagcaagtgcagat 50801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 53647798 - 53647857
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||| ||||||||||| |||||||||||    
T  53647798 cgtcttagtgcggtgtttatttgattcaggttgaaaaattaactttgagcaagtgcagat 53647857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 56062152 - 56062223
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||||||| |||||||||| | |||||||| | |||| |||||| ||||| ||||||||| ||||    
T  56062152 tctcgtcttagtgcaatgtttatttgattcaagttgacatattatctttgagcaagtacagattcaatcaat 56062223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 6082262 - 6082188
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||| |||||||   |||||||||||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  6082262 agacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 6082188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 6911847 - 6911905
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||||||||||| | || |||||||||||| |||||| |||| ||||||    
T  6911847 gtcttagtgcagtgtttatttgattcaggttgaaagattagctttgaacaagagcagat 6911905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 24611757 - 24611696
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||| ||||| | || ||||||||||||||||||| |||||||||||    
T  24611757 tctcgtcttagtgcggtgtt-atttgattcaggttgaaagattaactttgagcaagtgcagat 24611696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 11210119 - 11210062
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| ||||||||||||| |||| ||||| |||||||    
T  11210119 tatttgtaggcatatgtactttgtcgttttatgctattatcatggatgttgtgagttt 11210062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 31932562 - 31932619
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||||||| || |  |||||||||||||||||| ||||| |||||||    
T  31932562 tatttgtaggcatatgtactctattgttttatgctattaacatggatgttatgagttt 31932619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 36124303 - 36124242
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||| ||||    
T  36124303 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaattc 36124242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 45351023 - 45350966
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||  |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  45351023 tcttagtgtggtgtttatttgactcaagttgaaagattagctttgatcaagtgcagat 45350966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 45360502 - 45360445
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||  |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  45360502 tcttagtgtggtgtttatttgactcaagttgaaagattagctttgatcaagtgcagat 45360445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 477967 - 477899
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||| ||||||||||| | || ||||||| |||| |||||| ||||||||||| ||| ||||    
T  477967 cgtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgagcaagtgcagatccaatcaat 477899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 8712696 - 8712776
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||| ||||||||||| | | |||| ||||| |||||    
T  8712696 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgactttggcgtc 8712776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 11210268 - 11210220
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgat 74  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||||||    
T  11210268 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgat 11210220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 12754341 - 12754389
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagatt 86  Q
    ||||||||||| | |||||||||| ||||||||||| ||||||||||||    
T  12754341 gtgtttatttgattcaagttgaaacattaactttgaccaagtgcagatt 12754389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 26624019 - 26623939
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattttat 222  Q
    ||||||||| ||||||||   ||||||| ||||||||||||||||||| | |||||||| | | |||| ||||| ||||||    
T  26624019 tatttgtagacatatgtattatgtcattgtatgctattaacatgaatgatgtgagtttatttgaagattcatcctttttat 26623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 33020741 - 33020693
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgt 190  Q
    ||||||||||| |||||||  ||||||||||||||||||||||| ||||    
T  33020741 tatttgtaggcttatgtactttgtcattttatgctattaacatggatgt 33020693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 43244336 - 43244280
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||  | ||||||||||||||| |||||| ||||||||    
T  43244336 cgtcttagtgcggtgtttatttcattcaagttgaaagattagctttgagcaagtgca 43244280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 626500 - 626437
Alignment:
Q  31 tagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||||| ||||||||||| | || |||||||||||| |||||| ||||||||||| | ||||||    
T  626500 tagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgaccaat 626437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 7060489 - 7060548
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||| ||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  7060489 cgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 7060548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 12717072 - 12717013
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||| ||||| ||||||| ||||||||||    
T  12717072 cgtcttagtgcggtgtttatttgattcaggttgaaggattagctttgattaagtgcagat 12717013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 13965726 - 13965785
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| |  | |||||||||||| |||||| |||||||||||    
T  13965726 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgcagat 13965785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 15182775 - 15182854
Alignment:
Q  143 atttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattttat 222  Q
    ||||||||||||||||||  |||| || ||||||||||| ||  ||||| |||||||  ||| |||| ||||||||||||    
T  15182775 atttgtaggcatatgtactatgtcgttgtatgctattaatatagatgttgtgagtttgttcgcagattcatccattttat 15182854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 24825815 - 24825874
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| || |||||||| | || |||||||||||| |||||| |||||||||||    
T  24825815 cgtcttagtgcggtctttatttgattcaggttgaaagattagctttgagcaagtgcagat 24825874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 27394996 - 27395055
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||| | |||||||||||    
T  27394996 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttaagcaagtgcagat 27395055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 38944103 - 38944044
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||| || |||||| |||||||||||    
T  38944103 cgtcttagtgcggtgtttatttgattcaggttgaaagaatagctttgagcaagtgcagat 38944044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 22757261 - 22757319
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| ||||||||||| | || |||||||||||| |||||| ||| |||||||    
T  22757261 gtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaaatgcagat 22757319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 43278100 - 43278154
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtg 80  Q
    ||||||||||| ||||||||||| | || |||| |||||||||||||| ||||||    
T  43278100 cgtcttagtgcggtgtttatttgattcaggttggaagattaactttgagcaagtg 43278154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 43493240 - 43493186
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  43493240 tcttagtgctgtgtttatttgattcaggttgaaagattagctttgagcaagtgca 43493186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 394080 - 394023
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |  | |||||||||||||||||| ||||| |||||||    
T  394080 tatttgtaggcatatgtactttcccgttttatgctattaacatggatgttgtgagttt 394023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 7060629 - 7060686
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  | || |||||||||||||||||| ||||| |||||||    
T  7060629 tatttgtaggcataggtactttatcgttttatgctattaacatggatgttgtgagttt 7060686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 8712822 - 8712879
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  |||| |||||||||||||||||| ||| | |||||||    
T  8712822 tatttgtaggcataagtactttgtcgttttatgctattaacatggatgatgtgagttt 8712879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 20399709 - 20399652
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  |||| ||||||||||||| |||| ||||| |||||||    
T  20399709 tatttgtaggcataagtactttgtcgttttatgctattaccatggatgttgtgagttt 20399652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 20887563 - 20887506
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | ||||||| |||||||||| ||||| |||||||    
T  20887563 tatttgtaggcatatgtactttgccgttttatgatattaacatggatgttgtgagttt 20887506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 24568497 - 24568464
Alignment:
Q  166 cattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||||||||| |||||||    
T  24568497 cattttatgctattaacatgaatgttgtgagttt 24568464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 25658482 - 25658539
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | ||||||||||| |||||| ||||| |||||||    
T  25658482 tatttgtaggcatatgtactttgccgttttatgctatcaacatggatgttgtgagttt 25658539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 46267981 - 46268038
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||| | ||||  |||| |||||||||||||||||| ||||| |||||||    
T  46267981 tatttgtaggcacaagtactttgtcgttttatgctattaacatggatgttgtgagttt 46268038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 51152430 - 51152487
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||| ||||||  || | |||||||||||||||||| ||||| |||||||    
T  51152430 tatttgtaggcaaatgtactttgccgttttatgctattaacatggatgttgtgagttt 51152487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 56236762 - 56236697
Alignment:
Q  41 tttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    |||||||| | |||||||||||||||||||||| |||| |||||| | | |||| ||||| |||||    
T  56236762 tttatttgattcaagttgaaagattaactttgagcaagcgcagatccgatcaatgactttggcgtc 56236697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 7454794 - 7454866
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||||||||||||||||  | ||| ||| |||| |||| | |||||||||||| || |||| |||||    
T  7454794 tcttagtgcagtgtttatttgttttaggttaaaaaattagctttaaacaagtgcagattgaatcaatgacttt 7454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 9255117 - 9255073
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatga 186  Q
    |||||||||||||||||||  |||  |||||||||||||||||||    
T  9255117 tatttgtaggcatatgtactatgttgttttatgctattaacatga 9255073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 20399858 - 20399802
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | ||  ||||||||||| |||||| ||||||||    
T  20399858 cgtcttagtgcggtgtttatttgattcagtttgaaagattagctttgagcaagtgca 20399802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 22121733 - 22121801
Alignment:
Q  132 aatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttta 200  Q
    ||||||| | |||||||||||||| ||||  |   ||||||||||||||||||||||||| ||| ||||    
T  22121733 aatatagttgtatttgtaggcataagtactatacgattttatgctattaacatgaatgttgtgacttta 22121801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 24100305 - 24100365
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||  ||||||||||| | || |||||||||||| |||||| |||||| ||||    
T  24100305 tcgtcttagtgtggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagat 24100365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 3204751 - 3204692
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  3204751 tctcgtcttagtgcagtgtttatttgattcaagttgaaagattaactttgagcaagtgca 3204692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 31202625 - 31202683
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  31202625 gtcttagtgcagtgtttatttgattcaggttgaaagattaactttgatcaagtgcagat 31202683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 43937140 - 43937081
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||||| |||||||||||    
T  43937140 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagat 43937081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 14600664 - 14600602
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  14600664 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 14600602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 19489007 - 19489069
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||| | || |||||||||||||||||||||||||||| |||||| |||| |||||    
T  19489007 gtgtttatttgattcaggttgaaagattaactttgatcaagtgcaaattcaatcaatgacttt 19489069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 24790982 - 24790925
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || |||||||||||||||||||| ||||| |||||||    
T  24790982 tatttgtaggcatatgtactttgccattttatgctattaacatggatgttgtgagttt 24790925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 10633144 - 10633076
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||| ||||||||||  | || |||||||||||| ||||||||||||| |||||||| ||||    
T  10633144 cgtcttagtgcggtgtttattttattcaggttgaaagattagctttgatcaagtgtagattcaatcaat 10633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 7579818 - 7579759
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  7579818 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 7579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 10338785 - 10338726
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | |||||||||| |||| |||||| |||||||||||    
T  10338785 cgtcttagtgcggtgtttatttgattcaagttgaaaaattagctttgagcaagtgcagat 10338726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 37612819 - 37612878
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||| ||| |||||||    
T  37612819 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaattgcagat 37612878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 10148234 - 10148308
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||   |||||||||||||| ||||  |||| |||||||||||||||||| ||| | |||||||    
T  10148234 agacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatggatgatgtgagttt 10148308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 13570701 - 13570643
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||  ||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  13570701 gtcttagtgtggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagat 13570643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 31407710 - 31407652
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  31407710 gtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 31407652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 32778918 - 32778840
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    ||||| ||| ||||||||||| | || ||||||||||||||||||| ||||||||||| | | |||| ||||| |||||    
T  32778918 tcttaatgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcaatgacttttgcgtc 32778840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 27534226 - 27534169
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||| |||||||  || | |||||||||||||||||||||||| |||||||    
T  27534226 tatttgtaggcttatgtactttgccgttttatgctattaacatgaatgttgtgagttt 27534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 30026845 - 30026788
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcag 83  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||    
T  30026845 cgtcttagtgcggtgtttatttgattcatgttgaaagattagctttgagcaagtgcag 30026788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 41362047 - 41362104
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| |||| ||| | |||||||||||||||||| ||||| |||||||    
T  41362047 tatttgtaggcataggtaccctgccgttttatgctattaacatggatgttgtgagttt 41362104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 2025187 - 2025128
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | ||  ||||||||||| |||||| |||||||||||    
T  2025187 cgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaagtgcagat 2025128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 2234433 - 2234374
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||| |||| |||||| |||||||||||    
T  2234433 cgtcttagtgcggtgtttatttgattcaggttgaaatattagctttgagcaagtgcagat 2234374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 4757331 - 4757390
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||| |||||||||||    
T  4757331 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 4757390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 5989847 - 5989970
Alignment:
Q  77 agtgcagattcaaccaataactttagcgtcatagacattg-aaatccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgc 175  Q
    ||||||||||||| |||| ||||| | ||| |  || ||| ||||||| |||||| |||||||   ||| ||||||| | |||||  |||| ||||||||    
T  5989847 agtgcagattcaatcaatgacttttgtgtcgtcaacgttgcaaatccggagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgc 5989946  T
Q  176 tattaacatgaatgttttgagttt 199  Q
    ||||||||||||| || |||||||    
T  5989947 tattaacatgaatattgtgagttt 5989970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 13576157 - 13576098
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||| | | ||  |||||||||||||||||| |||||||||||    
T  13576157 cgtcttagtgcggtgtttattagattcagattgaaagattaactttgagcaagtgcagat 13576098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 23970995 - 23970940
Alignment:
Q  144 tttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||| ||||  |||| |||||||||||||||||| ||||| |||||||    
T  23970995 tttgtaggcataggtactttgtcgttttatgctattaacatggatgttgtgagttt 23970940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 24700002 - 24700057
Alignment:
Q  30 ttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||| ||||||||||| | || ||||||||||||||||||| ||| |||||||    
T  24700002 ttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaaatgcagat 24700057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 37128450 - 37128391
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||  ||||| |||||||||||    
T  37128450 cgtcttagtgcggtgtttatttgattcaggttgaaagattagttttgagcaagtgcagat 37128391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 39067652 - 39067593
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||| | | || |||||||||||| |||||| |||||||||||    
T  39067652 cgtcttagtgcggtgtttattagattcatgttgaaagattagctttgagcaagtgcagat 39067593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 41361902 - 41361957
Alignment:
Q  30 ttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  41361902 ttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 41361957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 1039857 - 1039811
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttg 72  Q
    ||||||||||| ||||||||||| |||| |||||||||||| |||||    
T  1039857 cgtcttagtgcggtgtttatttgatccaggttgaaagattagctttg 1039811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 14600512 - 14600434
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||  || ||||| ||||| ||||    
T  14600512 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagtttgttcatagattcatccttttt 14600434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 31202747 - 31202821
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| |||||||||   |||||||||||||| ||||  || |||||||| ||||||||||| ||||| |||||||    
T  31202747 agacataaatatagtcctatttgtaggcataggtactttgccattttatactattaacatggatgttgtgagttt 31202821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 1810036 - 1809979
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || || |||||||||||||| || ||||| |||||||    
T  1810036 tatttgtaggcatatgtactttgccactttatgctattaacttggatgttgtgagttt 1809979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 10338645 - 10338588
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  10338645 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 10338588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 11162201 - 11162258
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||  |||  |||| |||||||||||||||||| ||||| |||||||    
T  11162201 tatttgtaggcatagatactttgtcgttttatgctattaacatggatgttgtgagttt 11162258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 20993107 - 20993164
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||| |||||||||| |||| ||||||| ||||||||||| || || |||||||    
T  20993107 tatttgtatgcatatgtactctgttattttatactattaacatggatattgtgagttt 20993164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 21471861 - 21471918
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||||||| || ||||| ||| ||||||||||| || || |||||||    
T  21471861 tatttgtaggcatatgtacgctatcattatattctattaacatggatattctgagttt 21471918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 37612951 - 37613008
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || |||||||||||||||||||| ||| | |||||||    
T  37612951 tatttgtaggcataggtactttgccattttatgctattaacatggatgatgtgagttt 37613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 39067504 - 39067447
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||| | |||||||    
T  39067504 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgctctgagttt 39067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 41996821 - 41996898
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagt 197  Q
    |||| ||| ||||||||||   ||| ||||||||| |||||  |||| |||||||||||||||||| ||||| |||||    
T  41996821 tccggagatttaaatatagtcatatgtgtaggcatttgtaccttgtcgttttatgctattaacatggatgttgtgagt 41996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 9501752 - 9501808
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||| |||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  9501752 cgtctttgtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgca 9501808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 10952109 - 10952053
Alignment:
Q  143 atttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| ||||||||  ||| ||||||||||||||||||| |||| ||||| |||||||    
T  10952109 atttataggcatagatactctgtcattttatgctattatcatggatgttgtgagttt 10952053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 10960114 - 10960058
Alignment:
Q  143 atttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| ||||||||  ||| ||||||||||||||||||| |||| ||||| |||||||    
T  10960114 atttataggcatagatactctgtcattttatgctattatcatggatgttgtgagttt 10960058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 32726606 - 32726670
Alignment:
Q  30 ttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||| ||||||||||| | || ||||||   |||||||||||||||| ||||||||| ||||    
T  32726606 ttagtgcggtgtttatttgattcaggttgaagacttaactttgatcaagtacagattcaatcaat 32726670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 37714645 - 37714716
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataac 97  Q
    |||||||||||| |||||||||| | || ||||||||||||| ||||||||||||||||||||| |||||||    
T  37714645 cgtcttagtgcaatgtttatttgattcaggttgaaagattaattttgatcaagtgcagattcaatcaataac 37714716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 4621186 - 4621129
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  4621186 tatttgtaggcatatgtactttgtcattttatgctattaacatgaatgttgtgagttt 4621129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 6496059 - 6496132
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||| |||||||||| | || ||||||||||||||||||| ||||||||||| | | ||||||||||    
T  6496059 gtcttagtgcaatgtttatttgattcaggttgaaagattaactttgaacaagtgcagatccgatcaataacttt 6496132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 6646415 - 6646343
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatc 214  Q
    ||||||||||||||||||| ||  |||||||||||||||||||| ||||| |||||||| |||| ||| ||||    
T  6646415 tatttgtaggcatatgtactctaccattttatgctattaacatggatgttgtgagtttattcgtcgattcatc 6646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 28664896 - 28664837
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||||||||||||||| | || |||||||||||| |||||| |||||||||||    
T  28664896 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 28664837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 6667710 - 6667788
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||||||||||||||||||  || |||||||||||||||||||| ||||| |||||||  || ||||| ||||| ||||    
T  6667710 tatttgtaggcatatgtactttgccattttatgctattaacatggatgttgtgagtttgttcatagattcatccttttt 6667788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 11833181 - 11833243
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  11833181 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 11833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 48304351 - 48304289
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  48304351 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 48304289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 39707452 - 39707524
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||||| ||||||||||| ||| |||| |||||    
T  39707452 gtcttagtgcagtgtttatttattc-aagttgaagtattaactttgagcaagtgcagatccaatcaatgacttt 39707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 4028344 - 4028404
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcag 83  Q
    |||| ||||| ||| ||||||||||| | ||||||||||||||||||||||| ||||||||    
T  4028344 tctcatcttattgctgtgtttatttgattcaagttgaaagattaactttgataaagtgcag 4028404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 39532927 - 39532871
Alignment:
Q  29 cttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||| ||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  39532927 cttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagat 39532871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 1281092 - 1281033
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  1281092 cgtcttagtgcggtgtttatttgattcaggttgaaagattacctttgagcaagtgcagat 1281033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 9719928 - 9719869
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  9719928 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 9719869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 21603626 - 21603685
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||||||||||  ||||||||||    
T  21603626 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagaaagtgcagat 21603685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 24320178 - 24320119
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  24320178 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 24320119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 27535591 - 27535662
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||||||| ||||| |||||||||||   ||||||||||||||| |||||| ||||||||| ||| ||||||    
T  27535591 tctcgtctaagtgcggtgtttatttgactcaagttgaaagattagctttgagcaagtgcaggttcgaccaat 27535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 2622760 - 2622826
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||| |||| ||||||||||| | ||| |||||||||||||||||| ||||||||||| ||| ||||    
T  2622760 tctttgtgcggtgtttatttgattcaaattgaaagattaactttgagcaagtgcagatccaatcaat 2622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 3266549 - 3266611
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||| | ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  3266549 tctcgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 3266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 9785480 - 9785542
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||| ||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  9785480 tctcatcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 9785542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 43256505 - 43256431
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||  ||||||||||| | |||||||||| ||||||||| || ||||||| |||| | ||||||||||    
T  43256505 cgtcttagtgaggtgtttatttgattcaagttgaaatattaactttaattaagtgcatattccatcaataacttt 43256431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 45457514 - 45457452
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||| | ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  45457514 tctcgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 45457452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 3266675 - 3266740
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgt 190  Q
    ||||||||||||||   |||||||||||||| ||||  |||| |||||||||||||||||| ||||    
T  3266675 agacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatggatgt 3266740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 10623977 - 10624038
Alignment:
Q  39 tgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||| | ||||||||||||||| |||||||||||| || |||||| |||| |||||    
T  10623977 tgtttatttgattcaagttgaaagattagctttgatcaagtacaaattcaatcaatgacttt 10624038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 37375861 - 37375804
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||| | |||||||    
T  37375861 tatttgtaggcatatgtactttgtcgttttatgctattaacatggatgctgtgagttt 37375804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 46025861 - 46025804
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||| | |||||||    
T  46025861 tatttgtaggcatatgtactttgtcgttttatgctattaacatggatgctgtgagttt 46025804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 47295493 - 47295550
Alignment:
Q  128 cttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatg 185  Q
    |||||||||||   |||||||| ||||||||||  |||||||||||||||||||||||    
T  47295493 cttaaatatagtaatatttgtaagcatatgtactatgtcattttatgctattaacatg 47295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 47300596 - 47300653
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||| |||| ||| ||||||||||||| |||| ||||||||||| |||||||    
T  47300596 tatttgtaggtatatatactctgtcattttatgttattgacatgaatgttatgagttt 47300653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 10094607 - 10094663
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  10094607 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgca 10094663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 11002121 - 11002197
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgag 196  Q
    |||| ||| ||||||||||   ||| ||||||||| |||||  || |||||||||||||||||||||||||| ||||    
T  11002121 tccggagatttaaatatagtcatatgtgtaggcatttgtactttgccattttatgctattaacatgaatgttgtgag 11002197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 22493215 - 22493275
Alignment:
Q  41 tttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttta 101  Q
    |||||||| | || ||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  22493215 tttatttgattcaggttgaaagattaactttgagcaagtgtggattcaatcaataacttta 22493275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 24988435 - 24988376
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||| ||||    
T  24988435 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagat 24988376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 27050421 - 27050350
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||||||||||||| ||||||||||| | || || ||||||||| |||||| ||| |||||| |||| ||||    
T  27050421 tctcgtcttagtgcggtgtttatttgattcatgtcgaaagattagctttgagcaaatgcagactcaatcaat 27050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 41288122 - 41288181
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| | ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  41288122 cgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 41288181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 45482230 - 45482289
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||| |||||||||||    
T  45482230 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 45482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 46025984 - 46025925
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| |  | |||||||||||| |||||| |||||||||||    
T  46025984 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgcagat 46025925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 5238119 - 5238193
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||| |||| || |||||||| | || ||||||||||||||||| | ||| ||||||||||| |||| |||||    
T  5238119 cgtcttggtgcggtatttatttgattcaggttgaaagattaactttaaccaaatgcagattcaatcaatgacttt 5238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 9137256 - 9137334
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    ||||||||| |||| ||||  ||||||||||||||||||||||| ||| | |||||||  ||||| || ||||| ||||    
T  9137256 tatttgtagacataagtactttgtcattttatgctattaacatggatgatgtgagtttgttcgtaaattcatccttttt 9137334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 25112678 - 25112752
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||| |  |||||||||| |  ||||||||||||||||||||| |||||||| || | | ||||||||||    
T  25112678 cgtcttagtacgatgtttatttgatttaagttgaaagattaactttgagcaagtgcatatccgatcaataacttt 25112752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 29352508 - 29352582
Alignment:
Q  124 aagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtt 198  Q
    ||||||| |||||||   |||||||||||||||||||  |   ||||||| ||||||||||||||||| ||||||    
T  29352508 aagacttgaatatagtcatatttgtaggcatatgtacttttctattttatactattaacatgaatgttgtgagtt 29352582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 32741041 - 32741115
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| |||||||||   ||||||||||||||| |||  |||  |||||||||||||||||| ||||| |||||||    
T  32741041 agacataaatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatggatgttgtgagttt 32741115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 2622907 - 2622964
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| |||   |||| | |||||||||||||||||||||| |||||||    
T  2622907 tatttgtaggcataggtattttgtcgtcttatgctattaacatgaatgttgtgagttt 2622964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 17473567 - 17473510
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||| ||||||||||  || |||||||| ||||||||||| ||||| |||||||    
T  17473567 tatttgtaagcatatgtactttgccattttatcctattaacatggatgttgtgagttt 17473510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 17509010 - 17508953
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||| ||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  17509010 tatttgtaagcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 17508953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 17544204 - 17544261
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||| ||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  17544204 tatttgtaagcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 17544261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 17579647 - 17579704
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||| ||||||||||  || |||||||| ||||||||||| ||||| |||||||    
T  17579647 tatttgtaagcatatgtactttgccattttatcctattaacatggatgttgtgagttt 17579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 21954774 - 21954717
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||||  ||||||||||| | || |||||||||||| |||||| ||||||||    
T  21954774 tcgtcttagtgtcgtgtttatttgattcaggttgaaagattagctttgagcaagtgca 21954717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 21990977 - 21991034
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  21990977 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 21991034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 22747315 - 22747258
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||| | |||||||    
T  22747315 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgatgtgagttt 22747258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 27535743 - 27535800
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||| | ||||  |||| |||||||||||||||||| ||||| |||||||    
T  27535743 tatttgtaggcacaagtactttgtcgttttatgctattaacatggatgttgtgagttt 27535800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 42644970 - 42645027
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||||||   || | |||||||||||||||||| ||||| |||||||    
T  42644970 tatttgtaggcatatgtaatttgccgttttatgctattaacatggatgttgtgagttt 42645027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 47750012 - 47750089
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagt 197  Q
    |||||||| ||||||||||   ||| ||||||||| |||||  || | |||||||||||||||||| ||||| |||||    
T  47750012 tccgaagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagt 47750089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 48304198 - 48304141
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  48304198 tatttgtaggcataagtactttgccgttttatgctattaacatggatgttatgagttt 48304141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6667561 - 6667617
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||| |||   ||||||||||||||  |||||||||||||||    
T  6667561 cgtcttagtgcggtgtttaattgactcaagttgaaagattggctttgatcaagtgca 6667617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 18753982 - 18754050
Alignment:
Q  129 ttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagt 197  Q
    ||||||||||   ||| ||||| ||| |||||  |||| |||||||||||||||||||||||| |||||    
T  18753982 ttaaatatagtcatatgtgtagacatttgtactttgtcgttttatgctattaacatgaatgttgtgagt 18754050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 27705025 - 27704985
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagatta 66  Q
    ||||||| ||||||||||||||| | |||||||||||||||    
T  27705025 cgtcttaatgcagtgtttatttgattcaagttgaaagatta 27704985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 29352392 - 29352472
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||  |||||| |||||| | |||| ||||| |||||    
T  29352392 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgtgcaagtgtagattcgatcaatgacttttgcgtc 29352472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 31730811 - 31730892
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcat 108  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||| |||||||| || | | |||||||||| |||||||    
T  31730811 gtcttagtgcaatgtttatttgattcaagttgaaagattaactttgaacaagtgcaaatccgatcaataactttggcgtcat 31730892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 40013233 - 40013167
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||||||||| ||||    
T  40013233 tcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagattcaatcaat 40013167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 3457237 - 3457294
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||||| |||||||    
T  3457237 tatttgtaggcatatgtactttgtcgttttatgctattaacatggatgttgtgagttt 3457294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 53155393 - 53155337
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||||||||||||||| | || |||||||||||| |||||| ||||||||    
T  53155393 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgca 53155337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 22485131 - 22485190
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  22485131 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 22485190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 54706678 - 54706619
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  54706678 cgtcttagtgcggtgtttatttgattcaggttgaaagattacctttgagcaagtgcagat 54706619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 55455031 - 55455090
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  55455031 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 55455090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 3961725 - 3961651
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||| ||||||||||| | || |||| |||||||||||||| ||| || |||||||| |||| |||||    
T  3961725 cgtcttagtgcggtgtttatttgattcaggttgtaagattaactttgagcaaatgtagattcaatcaatgacttt 3961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 47587187 - 47587109
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    ||||||||||| | | ||| ||||| |||||||||||||||||||||| | |||||||  ||| |||| ||||||||||    
T  47587187 tatttgtaggcttttatactctgtcgttttatgctattaacatgaatgatgtgagtttgttcgcagattcatccatttt 47587109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 48855192 - 48855270
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||||||||||||| ||||| || | ||||||| |||||||||| ||||| |||||||| || ||||| ||||| ||||    
T  48855192 tatttgtaggcataggtacattgccgttttatgttattaacatggatgttgtgagtttattcatagattcatccttttt 48855270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 30156104 - 30156047
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||| |||  |||| |||||||||||||||||| ||||| |||||||    
T  30156104 tatttgtaggcatatatactttgtcgttttatgctattaacatggatgttgtgagttt 30156047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 31462569 - 31462512
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||| ||||||||||| |||||||||||||    
T  31462569 tatttgtaggcatatgtactttgccgttttattctattaacatggatgttttgagttt 31462512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 36691762 - 36691701
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    ||||||||| | ||||||||||| |||| ||||||||||||||||||  |||||||| ||||    
T  36691762 cgtcttagtacggtgtttatttgatccaggttgaaagattaactttgcgcaagtgcatattc 36691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 40702718 - 40702815
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattttat 222  Q
    |||||| ||||||| | |||||||| | ||||||||  |||||||||||||| |||||||| ||| | | |||||  ||| |||| ||||||||||||    
T  40702718 agacttgaatatagttatatttgtatggatatgtactttgtcattttatgctcttaacatggatgatgtaagtttgttcgcagattcatccattttat 40702815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 48822245 - 48822298
Alignment:
Q  31 tagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcaga 84  Q
    |||||||||||||||||| |  | |||||||||||||||||||| |||||||||    
T  48822245 tagtgcagtgtttatttgattaaggttgaaagattaactttgattaagtgcaga 48822298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 54706546 - 54706489
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  54706546 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 54706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 1074857 - 1074801
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||| |||| ||||||| | ||||||||||||||| |||||| ||||||||    
T  1074857 cgtcttagtgtagtgattatttgattcaagttgaaagattagctttgagcaagtgca 1074801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 3457105 - 3457161
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||| | ||||||||||| | ||||||||||||||| |||||| ||||||||    
T  3457105 cgtcttagtacggtgtttatttgattcaagttgaaagattagctttgagcaagtgca 3457161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 13701964 - 13701908
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||| |||||| ||||||||||| | ||||||||||||||| |||||| ||||||||    
T  13701964 cgtcctagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgca 13701908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 35174874 - 35174930
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  35174874 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgca 35174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 14585628 - 14585687
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||| | |||||| |||||||||||    
T  14585628 cgtcttagtgcggtgtttatttgattcaggttgaaagatcagctttgagcaagtgcagat 14585687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 33637687 - 33637766
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| |||||| |||||||   |||||||||||||| ||||  || |||||||||||||||||||| ||| | |||||||    
T  33637687 tccggagacttgaatatagtcatatttgtaggcataggtaccttgccattttatgctattaacatggatgatgtgagttt 33637766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 36624658 - 36624599
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||| | |||||||||||    
T  36624658 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttaagcaagtgcagat 36624599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 47733843 - 47733760
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    |||||||||||||| ||||||||||| | || ||||||| ||||  ||||| ||| |||| |||||| |||| ||||| |||||    
T  47733843 tctcgtcttagtgcggtgtttatttgattcaggttgaaatattagttttgagcaaatgcatattcaatcaatgactttggcgtc 47733760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 48652403 - 48652344
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| |  | ||||||||||||||||||| |||| ||||||    
T  48652403 cgtcttagtgcggtgtttatttgatttaggttgaaagattaactttgaacaagagcagat 48652344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 48855043 - 48855102
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||  ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  48855043 cgtcttagtgtggtgtttatttgattcatgttgaaagattagctttgagcaagtgcagat 48855102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 49628058 - 49627999
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||| | |||||||||||    
T  49628058 cgtcttagtgcggtgtttatttgattcaggttgaaagattagcttttagcaagtgcagat 49627999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 53962284 - 53962343
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||| |||||||| |||||| |||||||||||    
T  53962284 cgtcttagtgcggtgtttatttgattcaggttaaaagattagctttgagcaagtgcagat 53962343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 105861 - 105783
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||||||||||||| ||||  |||| |||||||||||||||||| ||| | |||||||  ||| |||| ||||| ||||    
T  105861 tatttgtaggcataggtactttgtcgttttatgctattaacatggatgatgtgagtttgttcggagattcatccttttt 105783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 22485280 - 22485358
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||||||||||||| ||||  || | ||||||||||| |||||| ||||| |||||||  || ||||| ||||||||||    
T  22485280 tatttgtaggcataggtactttgccgttttatgctatgaacatggatgttgtgagtttgttcatagattcatccatttt 22485358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 31462708 - 31462650
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| | ||||||||| | || |||||||||||| |||||| |||||||||||    
T  31462708 gtcttagtgcggcgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 31462650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 48212503 - 48212585
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgt 105  Q
    |||||||||||||||||||||||| | | ||  ||||| ||||| || ||| ||||||||||| ||| |||| ||||| ||||    
T  48212503 tctcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgt 48212585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 5327424 - 5327363
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactt 99  Q
    ||||||||||| | || ||||||||||||| ||||||||||||||  || || |||||||||    
T  5327424 gtgtttatttgattcaggttgaaagattaattttgatcaagtgcatgtttaatcaataactt 5327363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 13701816 - 13701759
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  13701816 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 13701759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 25373887 - 25373830
Alignment:
Q  163 tgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    |||| |||||||||||||||||||||||| |||||||  ||| |||| ||||| ||||    
T  25373887 tgtcgttttatgctattaacatgaatgttgtgagttttttcgcagattcatccttttt 25373830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 31550211 - 31550276
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgt 190  Q
    |||||| ||||||| | |||||| |||||||||||   |||| |||||||||||||||||| ||||    
T  31550211 agacttgaatatagttatatttgcaggcatatgtatgatgtcgttttatgctattaacatggatgt 31550276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 38530239 - 38530296
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | ||||||| |||||||||| ||| |||||||||    
T  38530239 tatttgtaggcatatgtactttgccgttttatgttattaacatggatgctttgagttt 38530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 40013086 - 40013029
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||| ||||||||  || | |||||||||||||||||| ||||| |||||||    
T  40013086 tatttgtagggatatgtacgttgccgttttatgctattaacatggatgttgtgagttt 40013029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 41598290 - 41598241
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    ||||||||||||||||||| ||| ||||||||| |||||| ||| |||||    
T  41598290 tatttgtaggcatatgtactctgccattttatgttattaaaatggatgtt 41598241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 50520061 - 50520138
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagt 197  Q
    |||| ||| ||||||||||   ||| ||||||||| |||||  |||| |||||||||||||||||| ||||| |||||    
T  50520061 tccggagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatggatgttgtgagt 50520138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 53155244 - 53155187
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | ||||| |||||||||||| ||||| |||||||    
T  53155244 tatttgtaggcatatgtactttgcctttttacgctattaacatggatgttgtgagttt 53155187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 105998 - 105942
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||  ||||||||||| | || |||||||||||| |||||| ||||||||    
T  105998 cgtcttagtgtcgtgtttatttgattcaggttgaaagattagctttgagcaagtgca 105942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 19861241 - 19861181
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    ||||||||||| |||||| ||| | || ||||||| ||||||||||| |||||||| ||||    
T  19861241 gtcttagtgcaatgtttacttgattcaggttgaaatattaactttgagcaagtgcatattc 19861181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 28995145 - 28995045
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattt 219  Q
    |||| ||| ||||||||||   ||| ||||||||| |||||  || | |||||||||||||||||| ||||| |||||||  || ||||| ||||| |||    
T  28995145 tccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttt 28995046  T
Q  220 t 220  Q
    |    
T  28995045 t 28995045  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 38528665 - 38528713
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagatt 86  Q
    ||||||||| | |||| |||||||||||| |||||| ||||||||||||    
T  38528665 gtgtttattagatccaggttgaaagattagctttgaacaagtgcagatt 38528713  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 53402787 - 53402843
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||| ||||||||    
T  53402787 cgtcttagtgcgctgtttatttgattcaggttgaaagattagctttgagcaagtgca 53402843  T

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Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 31427098 - 31427025
Alignment:
Q  33 gtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||||  ||||| |||||||||| |||||    
T  31427098 gtgcagtgtttatttgattcaggttgaaagattaactttgatcaagtgcaacttcaatcaataacttttgcgtc 31427025  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 40862659 - 40862583
Alignment:
Q  123 gaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||| ||||||||   |||||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  40862659 gaagactaaaatatagtcatatttgtaggcataagtactctgtcgttttatgctattaacatggatgttttgagttt 40862583  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 8737510 - 8737586
Alignment:
Q  20 atatctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataa 96  Q
    |||||| |||||||||||||||||||||| | || |||||||||||| ||||||  |||||||||| ||| ||||||    
T  8737510 atatctagtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagtaagtgcagatccaatcaataa 8737586  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 38783230 - 38783301
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||||||||||||   |||||||||| ||||  |||||||||||||||||||||||||||||| ||| ||||    
T  38783230 tctcgtcttagtgtgatgtttatttgatccagtttgaaagattaactttgatcaagtgcagatgcaatcaat 38783301  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 4882313 - 4882255
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| ||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  4882313 gtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagat 4882255  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 9298369 - 9298312
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||| |||||||||||    
T  9298369 tcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagat 9298312  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 37662656 - 37662713
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||| || ||||  ||||||||||||||||||||||||||||| |||||||    
T  37662656 tatttgtaggcttacgtactttgtcattttatgctattaacatgaatgttgtgagttt 37662713  T

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Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 10304741 - 10304821
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagc 103  Q
    |||||||||||||  ||||||||||| | |||||||||| |||| ||||||  ||||| |||||||| |||| ||||||||    
T  10304741 tctcgtcttagtgtggtgtttatttgattcaagttgaaatattagctttgagaaagtggagattcaatcaatgactttagc 10304821  T

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Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 44517313 - 44517369
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||||| ||||||||    
T  44517313 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgca 44517369  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 9298237 - 9298159
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    ||||| |||||||| ||||  ||||||||||| ||||||||||| ||||| |||||||| ||| |||| ||||| ||||    
T  9298237 tatttataggcataggtactttgtcattttatactattaacatggatgttgtgagtttattcgcagattcatccttttt 9298159  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 38783367 - 38783429
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcg 204  Q
    ||||| |||||||||||||  |||||||||||  |||||||||| ||||||||||||| ||||    
T  38783367 tatttataggcatatgtactatgtcattttatattattaacatggatgttttgagtttgctcg 38783429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 42491056 - 42491118
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | ||  ||||||||||| |||||| |||||||||||    
T  42491056 tctcgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaagtgcagat 42491118  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 424098 - 424041
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  |||| |||||||||||||||||| ||||| |||||||    
T  424098 tatttgtaggcataggtactttgtcgttttatgctattaacatggatgttgtgagttt 424041  T

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Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 424246 - 424185
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    ||||||||| | ||||||||||| || | ||||||||||||||||||  |||||||||||||    
T  424246 cgtcttagtacggtgtttatttgatctaggttgaaagattaactttgcacaagtgcagattc 424185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 3233086 - 3233143
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | ||||||||||||||||||| |||| |||||||    
T  3233086 tatttgtaggcatatgtactttgccgttttatgctattaacatgagtgttgtgagttt 3233143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 7995383 - 7995326
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  | ||||||||||||||||||||| ||||| |||||||    
T  7995383 tatttgtaggcataagtactttatcattttatgctattaacatggatgttgtgagttt 7995326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 17347763 - 17347824
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    ||||||||||||||||||||||| |  | |||||||||||| ||||||  ||||||||||||    
T  17347763 cgtcttagtgcagtgtttatttgattaaggttgaaagattagctttgagtaagtgcagattc 17347824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 20413098 - 20413155
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||| | |||||||    
T  20413098 tatttgtaggcatatgtactttgtcgttttatgctattaacatggatgatgtgagttt 20413155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 32301501 - 32301558
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtg 80  Q
    |||||||||| ||| ||||||||||| | || |||||||||||| |||||||||||||    
T  32301501 tctcgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgatcaagtg 32301558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15391207 - 15391151
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  15391207 cgtcttagtgcggtgtttatttgattcaggttgaaagattatctttgagcaagtgca 15391151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 39080871 - 39080807
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaa 89  Q
    |||||||||||||||||||||||| | || ||| ||||||||  ||||| |||||| ||||||||    
T  39080871 tcgtcttagtgcagtgtttatttgattcatgttaaaagattagttttgagcaagtgtagattcaa 39080807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 13999131 - 13999206
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||| |  |||||||||| | || |||| |||||||||||||| ||| ||||||||||| |||| |||||    
T  13999131 tcgtcttagtacgatgtttatttgattcaggttgtaagattaactttgagcaaatgcagattcaatcaatgacttt 13999206  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 14265450 - 14265509
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||| |||||||||||    
T  14265450 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 14265509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 32784245 - 32784316
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataac 97  Q
    ||||||||||| ||||||||||| | || | |||||||||| |||||| |||||||| |||| | |||||||    
T  32784245 cgtcttagtgcggtgtttatttgattcaggctgaaagattagctttgagcaagtgcaaattcgatcaataac 32784316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 32878874 - 32878933
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| | ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  32878874 cgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 32878933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 37822300 - 37822242
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| |||||||| | || ||||||||||| ||||||| |||||||||||    
T  37822300 cgtcttagtgcagtatttatttgattcaggttgaaagatt-actttgagcaagtgcagat 37822242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 45750644 - 45750703
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||| | |||||||||||    
T  45750644 cgtcttagtgcggtgtttatttgattcaggttgaaagattagcttttagcaagtgcagat 45750703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 25033031 - 25032961
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcat 108  Q
    ||||||||||| | || ||||  ||||||||||||| |||||||| |||||| |||| ||||| |||||||    
T  25033031 gtgtttatttgattcaggttgtgagattaactttgagcaagtgcaaattcaatcaatgactttggcgtcat 25032961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 29069784 - 29069722
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||| | ||  |||||||||||| |||||||||||||| |||||| |||| |||||    
T  29069784 gtgtttatttgattcagattgaaagattaattttgatcaagtgcatattcaatcaatgacttt 29069722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 29205583 - 29205641
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttta 200  Q
    ||||||||||||| |||||  || | |||||||||||||||||| ||||| ||||||||    
T  29205583 tatttgtaggcatgtgtactttgccgttttatgctattaacatggatgttgtgagttta 29205641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 29802897 - 29802959
Alignment:
Q  129 ttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    ||||||||||   |||||| |||||||||||||||||| || ||||||||||| ||| |||||    
T  29802897 ttaaatatagtcatatttgaaggcatatgtacactgtcgttatatgctattaaaatggatgtt 29802959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 3101836 - 3101913
Alignment:
Q  29 cttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    ||||||||  |||||||||| | | |||||||| ||||||||||| |||||||| ||||||  ||| ||||| |||||    
T  3101836 cttagtgcgatgtttatttgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtc 3101913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 12871784 - 12871861
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||| |||||||||  |||||||||| |  | |||||||||||| |||||| ||||||||||||| | |||| |||||    
T  12871784 tctcatcttagtgcgttgtttatttgatttaggttgaaagattagctttgagcaagtgcagattcgatcaatgacttt 12871861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 29726403 - 29726346
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  29726403 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 29726346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 30678572 - 30678613
Alignment:
Q  159 acactgtcattttatgctattaacatgaatgttttgagttta 200  Q
    ||||| || ||||||||||||||||||||||| |||||||||    
T  30678572 acactatctttttatgctattaacatgaatgtcttgagttta 30678613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 32878986 - 32879051
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatg 185  Q
    |||||| |||| |||||||   |||||||||||||| ||||  |||| ||||||||||||||||||    
T  32878986 tccgaaaacttgaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatg 32879051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 34566981 - 34567038
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||| |||||||  || | |||||||||||||||||| ||||| |||||||    
T  34566981 tatttgtaggcttatgtactttgccgttttatgctattaacatggatgttgtgagttt 34567038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 42276523 - 42276580
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| ||||||||||| | || |||||||||||| |||| | |||||||||||    
T  42276523 tcttagtgcggtgtttatttgattcaggttgaaagattagctttaagcaagtgcagat 42276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 45750793 - 45750850
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || |||||||||||||||||||| ||| | |||||||    
T  45750793 tatttgtaggcataggtactttgccattttatgctattaacatggatgctgtgagttt 45750850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7995515 - 7995459
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||  ||||||||||| | || |||||||||||| |||||| ||||||||    
T  7995515 cgtcttagtgtggtgtttatttgattcaggttgaaagattagctttgagcaagtgca 7995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 12871899 - 12871999
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattt 219  Q
    |||| |||||| |||||||   || ||||||||||||||||  |||| |||||||||| ||||||| ||| | |||||||  || || |||||||| |||    
T  12871899 tccggagacttgaatatagtcatacttgtaggcatatgtactttgtcgttttatgctaataacatggatgctgtgagtttgttcataaatccatcctttt 12871998  T
Q  220 t 220  Q
    |    
T  12871999 t 12871999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 13152636 - 13152688
Alignment:
Q  56 ttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcat 108  Q
    |||||||||||||||||| ||||||||||| | | |||| ||||| |||||||    
T  13152636 ttgaaagattaactttgagcaagtgcagatccgatcaatgactttggcgtcat 13152688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 21326751 - 21326827
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgag 196  Q
    |||||||| ||||||||||   ||| ||||||||| |||||  || | |||||||||||||||||| ||||| ||||    
T  21326751 tccgaagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaacatggatgttgtgag 21326827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 33486985 - 33486929
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | || ||||||| ||||||||||| ||| ||||    
T  33486985 cgtcttagtgcggtgtttatttgattcaggttgaaaaattaactttgagcaaatgca 33486929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 7771774 - 7771717
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||    
T  7771774 tcttagtgcggtgtttatttgattcaagttgaaagattaactttgagcaagtgcagat 7771717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 11858076 - 11858135
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||||| |||||||||||    
T  11858076 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagat 11858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 25962082 - 25962144
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||||||||||||||| | || ||||||||||||  ||||| |||||||||||    
T  25962082 tctcgtcttagtgcagtgtttatttgattcaggttgaaagattagttttgagcaagtgcagat 25962144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 12524478 - 12524421
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||| | |||||  ||||||||||||||||||||||||||||| |||||||    
T  12524478 tatttgtaggcttttgtactttgtcattttatgctattaacatgaatgttgtgagttt 12524421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 12891844 - 12891901
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||| |||||||||||    
T  12891844 tcttagtgcggtgtttatttgatccaggttgaaagattagctttgagcaagtgcagat 12891901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 374449 - 374504
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||| |||||| |||| | |||||||||||| ||||||||||||||||||    
T  374449 gtcttagtgcggtgtttgtttgattcaagttgaaagagtaactttgatcaagtgca 374504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 980984 - 980925
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  980984 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 980925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 6635414 - 6635473
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||| ||| |||||||    
T  6635414 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaaatgcagat 6635473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 20146055 - 20145976
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||| || |||||||   ||||||||||| |||||||  ||||||||||||||||||||||  ||||| |||||||    
T  20146055 tccgaagattttaatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacattgatgttgtgagttt 20145976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 20483352 - 20483411
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| | |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  20483352 cgtcttagtacggtgtttatttgactcaagttgaaagattagctttgatcaagtgcagat 20483411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 20187462 - 20187388
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||   ||||||||||||||  ||| ||||  |||||||||||| ||||||||||| |||||||    
T  20187462 agacttaaatatagtaatatttgtaggcatagatactctgtggttttatgctattgacatgaatgttgtgagttt 20187388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 23882070 - 23882012
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| ||||||||||| | || ||||||||||||||||||| ||||| |||||    
T  23882070 gtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtacagat 23882012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 17732192 - 17732135
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  17732192 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 17732135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 20483501 - 20483558
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |  |||||||||||||||||||| ||||| |||||||    
T  20483501 tatttgtaggcatatgtacttttccattttatgctattaacatggatgttgtgagttt 20483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 25962219 - 25962276
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||  |||  |||| |||||||||||||||||||||||| |||||||    
T  25962219 tatttgtaggcatagatactttgtcgttttatgctattaacatgaatgttgtgagttt 25962276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 35402209 - 35402262
Alignment:
Q  34 tgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    |||| |||||||||| | || ||||||||||||||||||| |||||||||||||    
T  35402209 tgcaatgtttatttgattcaggttgaaagattaactttgaacaagtgcagattc 35402262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 39416072 - 39416015
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||| || || |||||||    
T  39416072 tatttgtaggcatatgtactctgtcattttttgctattaaaatggattttgtgagttt 39416015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 11734674 - 11734594
Alignment:
Q  119 atccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||| |||||| |||||||   |||||||||||||||||||  || | ||||||||||||||||||  |||| |||||||    
T  11734674 atccggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggttgttgtgagttt 11734594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 17732339 - 17732287
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtg 80  Q
    ||||||||| ||||||||||| | ||||||||||||||| |||||| ||||||    
T  17732339 tcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtg 17732287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 42505235 - 42505139
Alignment:
Q  124 aagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccatttt 220  Q
    ||||||| |||||||   ||||||||||||||  ||| ||||| ||| |||||||||||||| ||||| |||||||  ||| |||| ||||| ||||    
T  42505235 aagactttaatatagtcatatttgtaggcatagatactctgtcgtttcatgctattaacatggatgttgtgagtttgttcgcagattcatccttttt 42505139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 6281210 - 6281269
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||  |||||||||| | || |||||||||||| |||||| |||||||||||    
T  6281210 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 6281269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 6681834 - 6681791
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagatta 66  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||    
T  6681834 tctcgtcttagtgcgatgtttatttgttccaggttgaaagatta 6681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 29098073 - 29098152
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||| |||||| |||||||   |||||||||||||||||||  || | |||||||||||||||||| ||| | |||||||    
T  29098073 tccggagacttgaatatagtcatatttgtaggcatatgtaccttgccgttttatgctattaacatgtatgatgtgagttt 29098152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 32347669 - 32347610
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| | ||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  32347669 cgtcttagtacggtgtttatttaattcaagttgaaagattagctttgagcaagtgcagat 32347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 33164423 - 33164364
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||| ||||||    
T  33164423 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagagcagat 33164364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 18573482 - 18573560
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatc-aagtgcagattcaaccaataacttt 100  Q
    |||||| ||||||| ||||||||||| | || ||||||| ||||  ||||||| || ||||||||||| ||||||||||    
T  18573482 tctcgttttagtgcggtgtttatttgattcaggttgaaaaattagttttgatcaaaatgcagattcaatcaataacttt 18573560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 23428415 - 23428477
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | || || ||||||||| |||||| |||||| ||||    
T  23428415 tctcgtcttagtgcggtgtttatttgattcaggtagaaagattagctttgagcaagtgtagat 23428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 9406394 - 9406455
Alignment:
Q  123 gaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacat 184  Q
    |||||||| |||||||   ||||||||||| ||||||| | ||| |||||||||||||||||    
T  9406394 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 9406455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 12439495 - 12439438
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  |||| |||||||||||||||||| ||| | |||||||    
T  12439495 tatttgtaggcataggtactttgtcgttttatgctattaacatggatgatgtgagttt 12439438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 14535061 - 14535146
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcat 108  Q
    |||| ||||| ||| ||||||||||| | |   ||||||||||  ||||||||||||| |||||||| |||| ||||| |||||||    
T  14535061 tctcatcttaatgcggtgtttatttgattcggattgaaagattggctttgatcaagtgtagattcaatcaatgacttttgcgtcat 14535146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 17325472 - 17325427
Alignment:
Q  146 tgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    ||||||| |||||||  ||||||||||||||||||||||| |||||    
T  17325472 tgtaggcttatgtactttgtcattttatgctattaacatggatgtt 17325427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 28040944 - 28041005
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactc 203  Q
    |||||||||||||||||||  || | |||||||||| ||||||| ||| | |||||||||||    
T  28040944 tatttgtaggcatatgtactttgccgttttatgctactaacatggatgatgtgagtttactc 28041005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 39179651 - 39179594
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||  ||||||||  |||| |||||||||||||||||| ||||| |||||||    
T  39179651 tatttgtagatatatgtactttgtcgttttatgctattaacatggatgttgtgagttt 39179594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 39531218 - 39531161
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||| | |||||||    
T  39531218 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgatgtgagttt 39531161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 39915664 - 39915733
Alignment:
Q  31 tagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||| ||||||||||  | || |||||||||||| |||||| |||||||| || ||| ||||||||||    
T  39915664 tagtgcggtgtttattttattcaggttgaaagattagctttgagcaagtgcatatccaatcaataacttt 39915733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 40564971 - 40564914
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||| |||||||  |||| |||||||||||||||||  ||||| |||||||    
T  40564971 tatttgtaggcttatgtactttgtcgttttatgctattaacatagatgttgtgagttt 40564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 17331494 - 17331562
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||| ||||||||||| | || ||||||||||||  ||||| |||| |||||| | ||||||    
T  17331494 cgtcttagtgcggtgtttatttgattcaggttgaaagattagttttgaacaagagcagatccgaccaat 17331562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 25770906 - 25770986
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatccattttat 222  Q
    ||||||||||| |||||||  ||||||||||| ||||||| |||||  || |||||||  ||| |||||||| | ||||||    
T  25770906 tatttgtaggcttatgtactttgtcattttattctattaagatgaacattgtgagtttgttcgcagatccataccttttat 25770986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 43494030 - 43494082
Alignment:
Q  30 ttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||| ||||||||||| | || ||||||||| ||||||||| ||||||||    
T  43494030 ttagtgcggtgtttatttgattcaggttgaaagactaactttgagcaagtgca 43494082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 3945 - 4028
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    |||||||||| ||  ||||||||||| | ||| || |||||||| |||||||||||||||||| ||| |||||||||| |||||    
T  3945 tctcgtcttattgtggtgtttatttgattcaaattaaaagattatctttgatcaagtgcagatccaatcaataactttggcgtc 4028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 18089352 - 18089293
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  18089352 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagat 18089293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 36868171 - 36868230
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||||||| ||||||||||| | || ||||||||||||||||||| ||||||||    
T  36868171 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgca 36868230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 5754451 - 5754513
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  5754451 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 5754513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 27666376 - 27666458
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtcat 108  Q
    ||||||||||| ||||||||||| | || ||| ||||||||| |||||| ||||||| |||||| |||| ||||| |||||||    
T  27666376 cgtcttagtgcggtgtttatttgattcaggttaaaagattaattttgatgaagtgcatattcaatcaatgacttttgcgtcat 27666458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 19904678 - 19904755
Alignment:
Q  30 ttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtca 107  Q
    |||||||  |||||||||| | || || ||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  19904678 ttagtgcgatgtttatttgattcaggtagaaagattaactttgatcaagtgcatattcaatcgataacttttgcgtca 19904755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 9978624 - 9978556
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||||| ||| ||||    
T  9978624 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccaatcaat 9978556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 4426613 - 4426554
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  4426613 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 4426554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 4732236 - 4732295
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||| |||||| ||||    
T  4732236 cgtcttagtgcggtgtttatttgattcaagttgaaagattatctttgagcaagtgtagat 4732295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 10286962 - 10286903
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  10286962 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 10286903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 32314608 - 32314667
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  32314608 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 32314667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 34471136 - 34471211
Alignment:
Q  30 ttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgt 105  Q
    ||||||| || |||||||| | || ||||||||||||||||||| ||||||||||| ||| |||| ||||| ||||    
T  34471136 ttagtgcggtatttatttgattcatgttgaaagattaactttgagcaagtgcagatccaatcaatgactttggcgt 34471211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 43474083 - 43474024
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  43474083 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 43474024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 11561625 - 11561564
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaa 89  Q
    |||||||||| ||| ||||||| | || |||||| ||||||||||||||||||||||||||||    
T  11561625 gtcttagtgcggtgattatttgattcaggttgaa-gattaactttgatcaagtgcagattcaa 11561564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 11798360 - 11798286
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||| |||||||   |||||||||||||| ||||  |||| |||||||||||||||||| ||||| |||||||    
T  11798360 agacttgaatatagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggatgttgtgagttt 11798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 12891076 - 12891014
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||| |||||| ||||||||||| | || |||||||||||| |||||| |||||||||||    
T  12891076 tctcgtcctagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagat 12891014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 13548855 - 13548782
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||| ||| || |||||||| | || |||||||||||| |||||||||| ||||||||||| |||| |||||    
T  13548855 gtcttaatgcggtttttatttgattcaggttgaaagattagctttgatcaaatgcagattcaatcaatgacttt 13548782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 17792641 - 17792714
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||| | ||||||||||||| | || ||||||||||||  ||||||||| ||||||||||| |||| |||||    
T  17792641 gtcttaatacagtgtttatttgattcatgttgaaagattagttttgatcaaatgcagattcaatcaatgacttt 17792714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 22597301 - 22597358
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcag 83  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||||||    
T  22597301 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcag 22597358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 28231058 - 28230993
Alignment:
Q  20 atatctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||| ||||||||||| ||||||||||| | || |||||||||| | |||||| |||||||||||    
T  28231058 atatcccgtcttagtgcggtgtttatttgattcaggttgaaagatcagctttgagcaagtgcagat 28230993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 32314740 - 32314797
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| |||||||||||||    
T  32314740 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttttgagttt 32314797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 36868323 - 36868380
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  36868323 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 36868380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 6510648 - 6510716
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    |||||||||||| |||||||||| | |||||||||| |||| ||||||  ||||||| |||||| ||||    
T  6510648 cgtcttagtgcaatgtttatttgattcaagttgaaaaattagctttgaataagtgcatattcaatcaat 6510716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 9689940 - 9689884
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||| ||||| ||||||||||| | || ||||||||||||||||||| ||||||||    
T  9689940 cgtctcagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgca 9689884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 16720679 - 16720619
Alignment:
Q  125 agacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatg 185  Q
    ||||||||||||||   ||| ||||||||| |||||  |||||||||||||||||||||||    
T  16720679 agacttaaatatagtcatatgtgtaggcatttgtactttgtcattttatgctattaacatg 16720619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 20598610 - 20598542
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataactttagcgtc 106  Q
    ||||||||||| | || ||||||||||||  ||| |||||||| ||||||||||||| ||||| |||||    
T  20598610 gtgtttatttgattcaggttgaaagattagttttaatcaagtgtagattcaaccaatgacttttgcgtc 20598542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 33012214 - 33012270
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||  | || |||||||||||| |||||||||||||||    
T  33012214 cgtcttagtgcggtgtttatttaattcaggttgaaagattagctttgatcaagtgca 33012270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 13878952 - 13878905
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| | || ||||||||||||||||||| |||||||||||    
T  13878952 gtgtttatttgattcaggttgaaagattaactttgagcaagtgcagat 13878905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 14019077 - 14019030
Alignment:
Q  38 gtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| | || ||||||||||||||||||| |||||||||||    
T  14019077 gtgtttatttgattcaggttgaaagattaactttgagcaagtgcagat 14019030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 17118624 - 17118561
Alignment:
Q  146 tgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagat 209  Q
    ||||||| | |||||  |||| |||||||||||||||||||||||| |||||||  ||||||||    
T  17118624 tgtaggcgtttgtactttgtcgttttatgctattaacatgaatgttgtgagtttgttcgtagat 17118561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 26254890 - 26254835
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    |||||||||| ||||||||||| |  | ||||||||||||||||||| ||||||||    
T  26254890 gtcttagtgcggtgtttatttgatttaggttgaaagattaactttgagcaagtgca 26254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 34963031 - 34962972
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || ||||||||||||  ||||| |||||||||||    
T  34963031 cgtcttagtgcggtgtttatttgattcaggttgaaagattagatttgagcaagtgcagat 34962972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 35333671 - 35333730
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| |||||| ||||    
T  35333671 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagat 35333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 38384412 - 38384353
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||  | || |||||||||||| |||||| |||||||||||    
T  38384412 cgtcttagtgcggtgtttattttattcaggttgaaagattagctttgagcaagtgcagat 38384353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 823913 - 823843
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataa 96  Q
    ||||||||||| ||||||||||| | ||  |||||| |||| |||||| ||||| ||||||||| ||||||    
T  823913 cgtcttagtgcggtgtttatttgattcagattgaaaaattagctttgagcaagttcagattcaatcaataa 823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 4739496 - 4739554
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| ||||||||||| | || ||||||||||||  ||||| |||||||||||    
T  4739496 gtcttagtgcggtgtttatttgattcaggttgaaagattagttttgagcaagtgcagat 4739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 8531515 - 8531449
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||| ||||||||||| | || ||| ||||| ||||||| |||||||||| |||||| ||||    
T  8531515 tcttagtgcggtgtttatttgattcatgtttaaagaataactttaatcaagtgcaaattcaatcaat 8531449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 12994170 - 12994120
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttga 73  Q
    ||||||||||||||| |||||||||| | | ||||||||||||| ||||||    
T  12994170 tctcgtcttagtgcaatgtttatttgattctagttgaaagattagctttga 12994120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 15920154 - 15920216
Alignment:
Q  122 cgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacat 184  Q
    ||||||||| |||||||   |||||||||||||||||||  || | |||||||||||||||||    
T  15920154 cgaagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacat 15920216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 40039263 - 40039189
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    ||||||||||| ||||||||||  | || ||||||| ||||   |||||||||||||||||||| |||| |||||    
T  40039263 cgtcttagtgcggtgtttattttattcaggttgaaaaattagtattgatcaagtgcagattcaatcaatgacttt 40039189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 43696035 - 43696093
Alignment:
Q  27 gtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    |||||||||| ||||||||||| | || ||||||| |||| |||||| |||||||||||    
T  43696035 gtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgaacaagtgcagat 43696093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 4426465 - 4426408
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |  |||||||||||||||||||| ||| | |||||||    
T  4426465 tatttgtaggcatatgtacttttccattttatgctattaacatggatgctatgagttt 4426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 6431355 - 6431298
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||| ||||| ||||| | || ||||||||||||||||||| |||| ||||||    
T  6431355 tcttagtgcggtgttgatttgattcaggttgaaagattaactttgagcaagcgcagat 6431298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 6593416 - 6593457
Alignment:
Q  39 tgtttatttgttccaagttgaaagattaactttgatcaagtg 80  Q
    |||||||||| | ||||||||| |||||||||||||||||||    
T  6593416 tgtttatttgattcaagttgaatgattaactttgatcaagtg 6593457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 7072780 - 7072723
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||| |||  || | |||||||||||||||||| ||||| |||||||    
T  7072780 tatttgtaggcatatatactttgccgttttatgctattaacatggatgttgtgagttt 7072723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 9689791 - 9689734
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  |||| |||||||||||||||||| ||| | |||||||    
T  9689791 tatttgtaggcataagtactttgtcgttttatgctattaacatggatgctatgagttt 9689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 13740616 - 13740547
Alignment:
Q  25 tcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaat 94  Q
    ||||||||||||  |||||||||| | || |||||||||||| |||||| ||||| ||||| ||| ||||    
T  13740616 tcgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgaacaagtacagatccaatcaat 13740547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 17056257 - 17056216
Alignment:
Q  168 ttttatgctattaacatgaatgttttgagtttactcgtagat 209  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  17056257 ttttatgctattaacatgaatgttgtgagtttgttcgtagat 17056216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 17068704 - 17068663
Alignment:
Q  168 ttttatgctattaacatgaatgttttgagtttactcgtagat 209  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  17068704 ttttatgctattaacatgaatgttgtgagtttgttcgtagat 17068663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 17095274 - 17095233
Alignment:
Q  168 ttttatgctattaacatgaatgttttgagtttactcgtagat 209  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  17095274 ttttatgctattaacatgaatgttgtgagtttgttcgtagat 17095233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 27096004 - 27096061
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  27096004 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 27096061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 33012363 - 33012420
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||| ||||||||||||  || | |||||||||||||||||| ||||| |||||||    
T  33012363 tatttgaaggcatatgtactttgccgttttatgctattaacatggatgttgtgagttt 33012420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 34416569 - 34416520
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    |||||||||||||||||||  || | |||||||||||||||||| |||||    
T  34416569 tatttgtaggcatatgtactttgccgttttatgctattaacatggatgtt 34416520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 34471275 - 34471332
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||||||   || | |||||||||||||||||| ||||| |||||||    
T  34471275 tatttgtaggcatatgtattttgccgttttatgctattaacatggatgttgtgagttt 34471332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 38535260 - 38535203
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcag 83  Q
    |||| |||||| ||||||||||| | || |||||||||||| |||||| |||||||||    
T  38535260 cgtcctagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcag 38535203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 44942601 - 44942658
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| |||||||    
T  44942601 tatttgtaggcataggtactttgccgttttatgctattaacatggatgttgtgagttt 44942658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 11937672 - 11937616
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtt 198  Q
    |||||||||||||| ||||  || | |||||||||||||||||| ||||| ||||||    
T  11937672 tatttgtaggcataagtactttgccgttttatgctattaacatggatgttgtgagtt 11937616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12704853 - 12704909
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| |  | |||||||||||| |||||| ||||||||    
T  12704853 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgca 12704909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 15028139 - 15028098
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatg 185  Q
    |||||||||||||||||||  ||||||||||||||||| |||||    
T  15028139 tatttgtaggcatatgtac--tgtcattttatgctattgacatg 15028098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 29938584 - 29938643
Alignment:
Q  142 tatttgtaggcatatgtacact--gtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||||   ||   ||||||||||||||||||||||| |||||||    
T  29938584 tatttgtaggcatatgtacacacggttggtttatgctattaacatgaatgttgtgagttt 29938643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 40039129 - 40039057
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagtttactcgtagatccatc 214  Q
    ||||| || ||||||||||  ||| ||||||||||||||||||| | ||| |||||||  |||||||| ||||    
T  40039129 tatttataagcatatgtaccttgtaattttatgctattaacatggacgttgtgagtttgttcgtagattcatc 40039057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 44942452 - 44942508
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||| ||||||||||| | ||  ||||||||||| |||||| ||||||||    
T  44942452 cgtcttagtgcggtgtttatttgattcagcttgaaagattagctttgagcaagtgca 44942508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 25326 - 25268
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttta 200  Q
    ||||||||||| |||||||  || |||||||||||||||||||| ||||| ||||||||    
T  25326 tatttgtaggcctatgtactttgccattttatgctattaacatggatgttgtgagttta 25268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 6936 - 6879
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |  |||||||||||||||||||| ||||| |||||||    
T  6936 tatttgtaggcatatgtactttaccattttatgctattaacatggatgttgtgagttt 6879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 6303 - 6364
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattc 87  Q
    ||||||||| | ||||||||||| || | ||||||||||||||||||  |||||||||||||    
T  6303 cgtcttagtacggtgtttatttgatctaggttgaaagattaactttgcacaagtgcagattc 6364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 6451 - 6508
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||| ||||  |||| |||||||||||||||||| ||||| |||||||    
T  6451 tatttgtaggcataggtactttgtcgttttatgctattaacatggatgttgtgagttt 6508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 1740 - 1799
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagat 85  Q
    ||||||||||| ||||||||||| | || |||||||||||| |||||| ||||| |||||    
T  1740 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtacagat 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 143 - 197
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  143 tcttagtgctgtgtttatttgattcaggttgaaagattagctttgagcaagtgca 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 2004 - 2061
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||||||||||||  |||| |||||||||||| ||||| ||| | |||||||    
T  2004 tatttgtaggcatatgtactttgtcgttttatgctattgacatggatgatgtgagttt 2061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 30; Significance: 0.00000008; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 606 - 557
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    ||||||||||||||||||| ||  ||||||||| |||||||||| |||||    
T  606 tatttgtaggcatatgtactctaccattttatgatattaacatggatgtt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 740 - 663
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||||||| ||||||||||| | || ||| |||||||   ||||||||| | ||||||||| |||| |||||    
T  740 tctcgtcttagtgcggtgtttatttgattcatgttaaaagattccttttgatcaactacagattcaatcaatgacttt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 8345 - 8296
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgtt 191  Q
    ||||||||||||||||||| ||  ||||||||| |||||||||| |||||    
T  8345 tatttgtaggcatatgtactctaccattttatgatattaacatggatgtt 8296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 8479 - 8402
Alignment:
Q  23 tctcgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaaccaataacttt 100  Q
    |||||||||||||| ||||||||||| | || ||| |||||||   ||||||||| | ||||||||| |||| |||||    
T  8479 tctcgtcttagtgcggtgtttatttgattcatgttaaaagattccttttgatcaactacagattcaatcaatgacttt 8402  T

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Target: scaffold0294 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 3873 - 3816
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    ||||||||||||||| |||  || | |||||||||||||||||| ||||| |||||||    
T  3873 tatttgtaggcatatatactttgccgttttatgctattaacatggatgttgtgagttt 3816  T

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Target: scaffold0288 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 20908 - 20965
Alignment:
Q  142 tatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttttgagttt 199  Q
    |||||||||| ||||||||  |||| |||||||||||||||||| ||| | |||||||    
T  20908 tatttgtagggatatgtactttgtcgttttatgctattaacatggatgatgtgagttt 20965  T

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Target: scaffold0202 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 22579 - 22518
Alignment:
Q  28 tcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgcagattcaa 89  Q
    |||||||||||||| |||||| | |  |||| |||||||  |||||||||||||||||||||    
T  22579 tcttagtgcagtgtgtatttgattctggttgtaagattagttttgatcaagtgcagattcaa 22518  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 13200 - 13144
Alignment:
Q  26 cgtcttagtgcagtgtttatttgttccaagttgaaagattaactttgatcaagtgca 82  Q
    ||||||||||  ||||||||||| | || |||||||||||| |||||| ||||||||    
T  13200 cgtcttagtgaggtgtttatttgattcaggttgaaagattagctttgagcaagtgca 13144  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 9494 - 9422
Alignment:
Q  120 tccgaagacttaaatatagctttatttgtaggcatatgtacactgtcattttatgctattaacatgaatgttt 192  Q
    |||||||| ||||||||||   ||| ||||||||| |||||  || | |||||||||||||||||| ||||||    
T  9494 tccgaagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgttt 9422  T

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