View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19972_low_19 (Length: 235)
Name: NF19972_low_19
Description: NF19972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19972_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 32317495 - 32317699
Alignment:
| Q |
16 |
aagaaaaaacgtcatttttatttgtcctttgaaattggaggaggttgagcaatttgatccttcaaacttgcaaaaacacaaattaatctttaaaattaaa |
115 |
Q |
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| T |
32317495 |
aagaaaaaacgtcatttttatttgtcctttgaaattggaggaggttgagcaatttgatccttcaaacttgcaaaaacacaaattaatctttaaaattaaa |
32317594 |
T |
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| Q |
116 |
gattgtcaatcaatttcatctctctgtcatcttataagattaaaatgttgatttgacatattgtttataatttacttggagtcagggtcgacaaaggggg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32317595 |
gattgtcaatcaatttcatctctctgtcatcttataagattaaaatgttgagttgacatattgtttataagttacttggagtcagggtcgacaaaggggg |
32317694 |
T |
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| Q |
216 |
ctgcc |
220 |
Q |
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||||| |
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| T |
32317695 |
ctgcc |
32317699 |
T |
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