View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19973_high_12 (Length: 511)
Name: NF19973_high_12
Description: NF19973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19973_high_12 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 459; Significance: 0; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 17 - 491
Target Start/End: Complemental strand, 6424421 - 6423947
Alignment:
| Q |
17 |
aaaaatatggagataacaccagcaccataaccaaagaacaattggagccaaacttgggcgggatcactgtagaacaggtaatgacacaagatattaatgt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424421 |
aaaaatatggagataacaccagcaccataaccaaagaacaattggagccaaacttgggcgggatcactgtagaacaggtaatgacacaagatattaatgt |
6424322 |
T |
|
| Q |
117 |
ttttctagagaaatggttcatttttattcaaatgatgtacggtgactaaattatattttgttgattaggctatccaaaaccacaaactgtacatccttga |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
6424321 |
ttttctagagaaatggttcatttttattcaaatgatgtacggtgactaaattatattttgttgattaggctatccaaaacaacaaattgtacatccttga |
6424222 |
T |
|
| Q |
217 |
tcactatgacatagtatatccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaact |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424221 |
tcactatgacatagtatatccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaact |
6424122 |
T |
|
| Q |
317 |
ttaaagccactggcgattgaactaagtaagccacatcctgacgatgatagttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaag |
416 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424121 |
ttaaagccactggcgattgagctaagtaagccacatcctgacgatgatagttatggacctgttagtgaagtttacttccctgcaagtgaaggtgttgaag |
6424022 |
T |
|
| Q |
417 |
cttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424021 |
cttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
6423947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 159 - 491
Target Start/End: Complemental strand, 6332082 - 6331750
Alignment:
| Q |
159 |
tgactaaattatattttgttgattaggctatccaaaaccacaaactgtacatccttgatcactatgacatagtatatccatatttgaggaaaataaatgc |
258 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| ||| || ||||| ||||||||| ||||| | ||| ||||||||||||||||||||| | |
|
|
| T |
6332082 |
tgactaaattatatttttttgaataggctatccaaaacaacaggctttacatacttgatcaccatgacccaatatttccatatttgaggaaaataaactc |
6331983 |
T |
|
| Q |
259 |
aactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgaactaagtaagccacatcctgac |
358 |
Q |
| |
|
|||||| |||||||| |||||| | |||||| || ||||||| ||||||||||||||||| |||||| |||| ||||| |||||||||||||||||| | |
|
|
| T |
6331982 |
aactgatacaaaggcatatgctacgagaaccttcattttcttacaaaatgatggaactttgaagccattggccattgagctaagtaagccacatcctcaa |
6331883 |
T |
|
| Q |
359 |
gatgatagttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatg |
458 |
Q |
| |
|
|| ||||||||||| ||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||| |
|
|
| T |
6331882 |
gaagatagttatggtcctgttagtaatgtttacttgcctgcaagtgaaggtgttgaagcttctatttggctacttgccaaagcttacgttgttgtaaatg |
6331783 |
T |
|
| Q |
459 |
actcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
|||| || ||| |||||||| ||||| |||| |
|
|
| T |
6331782 |
actcctgttttcatcaacttgtcagccactggt |
6331750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 183 - 491
Target Start/End: Complemental strand, 7459246 - 7458938
Alignment:
| Q |
183 |
aggctatccaaaaccacaaactgtacatccttgatcactatgacatagtatatccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgc |
282 |
Q |
| |
|
|||||||||||||| | ||| ||||||| ||||||||| | || || || |||||||||||||| |||||||||||||||||||||| ||||||| | |
|
|
| T |
7459246 |
aggctatccaaaacaataaattgtacatacttgatcaccacgatctactaattccatatttgaggagaataaatgcaactgagacaaagtcctatgcaac |
7459147 |
T |
|
| Q |
283 |
tagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgaactaagtaagccacatcctgacgatgatagttatggacctcttagt |
382 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||| ||| | | |||||||| || ||| ||||| |
|
|
| T |
7459146 |
tagaaccattcttttcttgcaaaatgatggaactttgaagccattggccattgaactaagtaggccacaccctcaaggtgatagtttaggtcctgttagt |
7459047 |
T |
|
| Q |
383 |
gaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgtta |
482 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||| |||||||| ||||| || |||||||| |||||||||||||| ||| | ||||||||||| | |
|
|
| T |
7459046 |
aatgtttacttgcctgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttatgtcgttgtaaatgactcatgctaccaccaacttgtca |
7458947 |
T |
|
| Q |
483 |
gccattggt |
491 |
Q |
| |
|
||||||||| |
|
|
| T |
7458946 |
gccattggt |
7458938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 491
Target Start/End: Complemental strand, 6363298 - 6363042
Alignment:
| Q |
235 |
tccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgatt |
334 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||| |||||| |||| ||| |
|
|
| T |
6363298 |
tccatatttgaggaaaataaatgcaaccgagactaaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccatt |
6363199 |
T |
|
| Q |
335 |
gaactaagtaagccacatcctgacgatgatagttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttg |
434 |
Q |
| |
|
|||||||||| |||||| ||| | | |||||||| ||| ||| |||| |||||||||| |||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
6363198 |
gaactaagtaggccacaccctcaaggtgatagttttggtcctgttagcaaagtttacttgcctgcaagtgaaggtgttgaagcttcaatttggctccttg |
6363099 |
T |
|
| Q |
435 |
ctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
| || ||||| ||| |||||||||| || || |||||||||||||||||||||||| |
|
|
| T |
6363098 |
ccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggt |
6363042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 235 - 491
Target Start/End: Complemental strand, 6352359 - 6352103
Alignment:
| Q |
235 |
tccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgatt |
334 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| |||||||||||| ||||||||||||| ||||||||||| ||| |
|
|
| T |
6352359 |
tccatatttgaggaaaataaatgcaaccgagacaaaggcctatgctaccagaaccatacttttcttgcaagatgatggaactttgaagccactggccatt |
6352260 |
T |
|
| Q |
335 |
gaactaagtaagccacatcctgacgatgatagttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttg |
434 |
Q |
| |
|
|||||||| | |||||| ||| | | |||||||| ||| ||| |||| | |||||||| || ||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
6352259 |
gaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttg |
6352160 |
T |
|
| Q |
435 |
ctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
| || |||| ||| |||||||||||||| ||| |||| |||||||| |||||||||| |
|
|
| T |
6352159 |
ccaaggcttttgttgttgtaaatgactcctgctatcatcaacttgtcagccattggt |
6352103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 133 - 491
Target Start/End: Complemental strand, 6274724 - 6274366
Alignment:
| Q |
133 |
ttcatttttattcaaatgatgtacggtgactaaattatat-tttgttgattaggctatccaaaaccacaaactgtacatccttgatcactatgacatagt |
231 |
Q |
| |
|
||||||||||||||||| || | | ||||| |||||||| ||| || | ||||||||||||| | ||||| ||||||| |||||| || | ||| | |
|
|
| T |
6274724 |
ttcatttttattcaaattat-tgcaatgactgaattatatatttttttaataggctatccaaaccaacaaattgtacatacttgattaccacgactcgtt |
6274626 |
T |
|
| Q |
232 |
atatccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcg |
331 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||| |||||||| |||||| | |||||| |||||||||| ||||||||||||||||| ||||| |||| |
|
|
| T |
6274625 |
atatccatatctgaggaaaataaatgcagctgatacaaaggcatatgctacgagaaccttccttttcttacaaaatgatggaactttgaagccgttggcc |
6274526 |
T |
|
| Q |
332 |
attgaactaagtaagccacatcctgacgatgatagttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctac |
431 |
Q |
| |
|
||||| ||||||| ||||||||| | | |||||| | ||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6274525 |
attgagctaagtagcccacatcctcaggctgatagctttggtcctgttagtgatatttacttgcctgcaagtgaaggtgttgaagcttctatttggctcc |
6274426 |
T |
|
| Q |
432 |
ttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
|||| || || || || |||||||| |||||||||||||||||||| | |||||||||| |
|
|
| T |
6274425 |
ttgccaaggcatacgttgttgtaaacgactcttgccatcaccaactcatcagccattggt |
6274366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 159 - 491
Target Start/End: Complemental strand, 6321577 - 6321242
Alignment:
| Q |
159 |
tgactaaattatattttgttgattaggctatccaaaaccacaaactgtacatccttgatcactatgacatagtatatccatatttgaggaaaataaatgc |
258 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||| ||| || ||||| ||||||||| ||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
6321577 |
tgactaaattatattttgttcaataggctatccaaaacaacaggctttacatacttgatcaccatgactcaatatatccatatctgaggaaaataaatgc |
6321478 |
T |
|
| Q |
259 |
aactgagacaa---aggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgaactaagtaagccacatcct |
355 |
Q |
| |
|
| |||| |||| |||| |||||| ||||||| ||| ||||||| ||||||||||||||||| |||||| | || ||||| ||||||| ||||||||| |
|
|
| T |
6321477 |
agctgatacaacaaaggcatatgctactagaactatcattttcttacaaaatgatggaactttgaagccattagccattgagctaagtagcccacatcct |
6321378 |
T |
|
| Q |
356 |
gacgatgatagttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaa |
455 |
Q |
| |
|
| | |||||| | ||| ||| ||||||| |||||||| ||||||| |||||||||||| ||||||||||||| ||||| || |||||||| |||||| |
|
|
| T |
6321377 |
caggctgatagctttggtcctgttagtgatgtttacttgcctgcaaaggaaggtgttgaatcttctatttggctccttgccaaggcttatgttattgtaa |
6321278 |
T |
|
| Q |
456 |
atgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| |
|
|
| T |
6321277 |
atgactcttctgttcaccaacttgtcagccactggt |
6321242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 307 - 491
Target Start/End: Complemental strand, 7471520 - 7471336
Alignment:
| Q |
307 |
tgatggaactttaaagccactggcgattgaactaagtaagccacatcctgacgatgatagttatggacctcttagtgaagtttacttccctgcaagtgaa |
406 |
Q |
| |
|
|||||||||||| |||||| |||| ||||||||||||| |||||| ||| | | |||||||| ||| ||| ||||| | |||||||| || ||||||||| |
|
|
| T |
7471520 |
tgatggaactttgaagccattggccattgaactaagtaggccacaccctcaaggtgatagttttggtcctgttagtaatgtttacttgcccgcaagtgaa |
7471421 |
T |
|
| Q |
407 |
ggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
|| || |||||||| |||||||| ||||| || |||||||| |||||||||||||| ||| ||||||||||||| |||||||||| |
|
|
| T |
7471420 |
ggcgtggaagcttcaatttggctccttgccaaggcttatgttgttgtaaatgactcatgctatcaccaacttgtcagccattggt |
7471336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 491
Target Start/End: Complemental strand, 6288828 - 6288612
Alignment:
| Q |
275 |
tatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgaactaagtaagccacatcctgacgatgatagttatggac |
374 |
Q |
| |
|
|||||| ||||||||||| ||||||| ||||||||||||||||| |||||| | || || || ||||||| || |||| | | |||| | | || | |
|
|
| T |
6288828 |
tatgctactagaaccatcattttcttacaaaatgatggaacttttaagccattagccatcgagctaagtagcccgaatccaaaaggtgatcgctttgatc |
6288729 |
T |
|
| Q |
375 |
ctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcacca |
474 |
Q |
| |
|
|| | ||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||| ||| ||||||| |
|
|
| T |
6288728 |
ctatcagtgatatctacttgcctgcaagtgaaggtgttgaatcttctatttggctacttgccaagaattatgtgattgtaaatgactcatgctatcacca |
6288629 |
T |
|
| Q |
475 |
acttgttagccattggt |
491 |
Q |
| |
|
|||| | ||||| |||| |
|
|
| T |
6288628 |
acttatcagccactggt |
6288612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 266 - 491
Target Start/End: Complemental strand, 6263403 - 6263178
Alignment:
| Q |
266 |
acaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgaactaagtaagccacatcctgacgatgata |
365 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||||| ||| |||||||||||||||||| |||| ||||| ||||| ||||||||| | | ||| |
|
|
| T |
6263403 |
acaaaggcctatgcttcaagaaccgtccttttcttgaaaagtgatggaactttaaagcctttggccattgagttaagtcttccacatcctcaaggagatc |
6263304 |
T |
|
| Q |
366 |
gttatggacctcttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttg |
465 |
Q |
| |
|
| ||| | ||||| | || ||||| ||||||| |||||||||||||||| | ||||||||||||| || |||||||| | ||||||||||| || |
|
|
| T |
6263303 |
aatttggtgttgttagtaacgtctacttgcctgcaattgaaggtgttgaagctacggtttggctacttgccaaggcttatgttatagtaaatgactcatg |
6263204 |
T |
|
| Q |
466 |
ccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
| |||||||||||| ||||| |||| |
|
|
| T |
6263203 |
ctttcaccaacttgtcagccactggt |
6263178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 368
Target Start/End: Complemental strand, 6370162 - 6370027
Alignment:
| Q |
233 |
tatccatatttgaggaaaataaatgcaactgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcga |
332 |
Q |
| |
|
|||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||| ||||| | || ||||||||||||| || ||| |||| | |
|
|
| T |
6370162 |
tatccatatttgaggaaagtaaatgaaactgaagcaaagacctatgctgctagaaccattctttttgttaaagatgatggaactttgaatccattggcca |
6370063 |
T |
|
| Q |
333 |
ttgaactaagtaagccacatcctgacgatgatagtt |
368 |
Q |
| |
|
|||| |||||| |||||||||| | | |||||||| |
|
|
| T |
6370062 |
ttgagctaagtttgccacatcctaatggtgatagtt |
6370027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6352701 - 6352616
Alignment:
| Q |
17 |
aaaaatatggagataacaccagcaccataaccaaagaacaattggagccaaacttgggcgggatcactgtagaacaggtaatgaca |
102 |
Q |
| |
|
|||||| ||| ||||| ||||||||||||||||||||| | |||||||||||| |||| ||| |||| |||||||||||||||||| |
|
|
| T |
6352701 |
aaaaatttggtgataataccagcaccataaccaaagaaaacttggagccaaacatgggtggggtcaccgtagaacaggtaatgaca |
6352616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 6363489 - 6363421
Alignment:
| Q |
29 |
ataacaccagcaccataaccaaagaacaattggagccaaacttgggcgggatcactgtagaacaggtaa |
97 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| |||||||| ||| ||| |||| ||||||||||||| |
|
|
| T |
6363489 |
ataataccagcaccataaccaaagaacatttgcagccaaacatggttggggtcacggtagaacaggtaa |
6363421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 7459496 - 7459412
Alignment:
| Q |
21 |
atatggagataacaccagcaccataaccaaagaacaattggagccaaacttgggcgggatcactgtagaacaggtaatgacacaa |
105 |
Q |
| |
|
|||||| ||||| |||||||| ||||||| || || |||||||||||| |||| ||| |||| ||||||||||||||| ||||| |
|
|
| T |
7459496 |
atatggtgataataccagcacaataaccattgatcacttggagccaaacatgggaggggtcacagtagaacaggtaatgtcacaa |
7459412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 491
Target Start/End: Complemental strand, 6390937 - 6390841
Alignment:
| Q |
395 |
cctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| ||||| || ||||| | ||||| |||||| | ||| ||||||||||| | ||||| |||| |
|
|
| T |
6390937 |
cctgcaagtgaaggtgttgatgcttcaatttggcaccttgccaaggcttacgctgttgtgaatgacgcatgctatcaccaacttatcagccactggt |
6390841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 491
Target Start/End: Complemental strand, 6410141 - 6410045
Alignment:
| Q |
395 |
cctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
||||||| |||||||||||| ||||| ||||||| ||||| || ||||| | |||||||||||| | ||| |||| |||||| | |||||||||| |
|
|
| T |
6410141 |
cctgcaactgaaggtgttgatgcttcaatttggcgccttgccaaggcttacgctgttgtaaatgacgcctgctatcatcaacttatcagccattggt |
6410045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 6370392 - 6370345
Alignment:
| Q |
22 |
tatggagataacaccagcaccataaccaaagaacaattggagccaaac |
69 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
6370392 |
tatggtgataataccagcacaataaccaaagaacacttggagccaaac |
6370345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 6410294 - 6410251
Alignment:
| Q |
236 |
ccatatttgaggaaaataaatgcaactgagacaaaggcctatgc |
279 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6410294 |
ccatatttgaggaaaataaatgcaactggcgcaaaggcctatgc |
6410251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 477
Target Start/End: Original strand, 42688772 - 42688854
Alignment:
| Q |
395 |
cctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaact |
477 |
Q |
| |
|
||||||| ||||||||||||| | ||||||||||||| || ||||||||||| || || ||||| |||||| |||| ||||| |
|
|
| T |
42688772 |
cctgcaaatgaaggtgttgaaagtactatttggctactagcaaaagcttatgtggtggttaatgattcttgctatcatcaact |
42688854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 491
Target Start/End: Complemental strand, 42693070 - 42692983
Alignment:
| Q |
404 |
gaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgactcttgccatcaccaacttgttagccattggt |
491 |
Q |
| |
|
|||||||||||| | |||||||| |||| ||||| ||||||||||| || ||||| || || |||| |||||||| |||||||||| |
|
|
| T |
42693070 |
gaaggtgttgaaagtactatttggttactggctaaggcttatgtagtagtgaatgattcctgttatcatcaacttgtcagccattggt |
42692983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 42688652 - 42688734
Alignment:
| Q |
275 |
tatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgaactaagtaagccacatcctga |
357 |
Q |
| |
|
|||||| |||| || ||||||||| | || | ||||||| |||||||||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
42688652 |
tatgctactaggacaatccttttcctaaaagaagatggaaatttaaagccagtggcgattgaattaagtttgccacatcctga |
42688734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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