View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19973_low_25 (Length: 385)

Name: NF19973_low_25
Description: NF19973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19973_low_25
NF19973_low_25
[»] chr6 (50 HSPs)
chr6 (86-368)||(26053318-26053605)
chr6 (86-368)||(26073371-26073658)
chr6 (82-189)||(30912430-30912537)
chr6 (82-189)||(6943478-6943585)
chr6 (82-189)||(7918399-7918506)
chr6 (82-189)||(15528128-15528235)
chr6 (82-189)||(17250061-17250168)
chr6 (90-189)||(17543766-17543865)
chr6 (82-189)||(27233295-27233402)
chr6 (82-181)||(23897823-23897922)
chr6 (82-192)||(10509041-10509151)
chr6 (14-88)||(26053110-26053184)
chr6 (14-88)||(26073163-26073237)
chr6 (82-189)||(7223523-7223623)
chr6 (15-88)||(7223756-7223829)
chr6 (15-88)||(19748574-19748647)
chr6 (82-189)||(2912266-2912372)
chr6 (82-189)||(11327589-11327696)
chr6 (101-188)||(18491074-18491161)
chr6 (116-186)||(3573984-3574054)
chr6 (119-189)||(5422803-5422873)
chr6 (14-88)||(15527924-15527998)
chr6 (15-88)||(11327377-11327450)
chr6 (82-189)||(17103206-17103306)
chr6 (15-88)||(17543545-17543618)
chr6 (15-88)||(22498255-22498328)
chr6 (82-185)||(22498903-22499006)
chr6 (82-186)||(19748340-19748444)
chr6 (15-85)||(7918165-7918235)
chr6 (15-88)||(17103436-17103509)
chr6 (15-75)||(27614471-27614531)
chr6 (91-173)||(4841946-4842026)
chr6 (21-88)||(27890627-27890694)
chr6 (85-147)||(21354786-21354848)
chr6 (20-86)||(27233119-27233185)
chr6 (15-84)||(3573715-3573784)
chr6 (116-189)||(10958239-10958312)
chr6 (101-167)||(18490998-18491064)
chr6 (15-89)||(31108395-31108469)
chr6 (129-186)||(8545030-8545087)
chr6 (101-189)||(27890138-27890225)
chr6 (101-189)||(33583766-33583854)
chr6 (117-184)||(8285776-8285843)
chr6 (16-55)||(27890582-27890621)
chr6 (101-167)||(18490922-18490988)
chr6 (36-85)||(8275366-8275415)
chr6 (15-88)||(20432408-20432481)
chr6 (15-55)||(21354949-21354989)
chr6 (44-88)||(33583511-33583554)
chr6 (32-84)||(33592983-33593034)
[»] chr3 (58 HSPs)
chr3 (82-189)||(29067288-29067395)
chr3 (82-189)||(20756043-20756150)
chr3 (82-189)||(28745774-28745881)
chr3 (82-184)||(21963438-21963540)
chr3 (82-184)||(21985874-21985976)
chr3 (82-189)||(3449310-3449416)
chr3 (82-189)||(8156148-8156256)
chr3 (82-189)||(39427906-39428013)
chr3 (82-184)||(22137287-22137389)
chr3 (14-88)||(8592213-8592287)
chr3 (10-88)||(28746017-28746095)
chr3 (17-89)||(3041463-3041535)
chr3 (17-89)||(22971049-22971121)
chr3 (82-189)||(24620218-24620328)
chr3 (86-189)||(24649710-24649814)
chr3 (89-189)||(27676360-27676460)
chr3 (82-186)||(30727709-30727813)
chr3 (82-188)||(17064326-17064432)
chr3 (15-88)||(24620012-24620085)
chr3 (89-189)||(15806531-15806630)
chr3 (15-88)||(22355881-22355954)
chr3 (20-88)||(20756263-20756331)
chr3 (89-183)||(10872971-10873065)
chr3 (82-189)||(25870390-25870501)
chr3 (82-155)||(22494799-22494872)
chr3 (17-77)||(18014243-18014303)
chr3 (17-88)||(20766718-20766789)
chr3 (115-189)||(28135726-28135800)
chr3 (17-85)||(8560274-8560342)
chr3 (89-189)||(13005931-13006031)
chr3 (10-85)||(17064551-17064626)
chr3 (18-88)||(3449128-3449198)
chr3 (30-88)||(13286185-13286243)
chr3 (99-189)||(17796381-17796471)
chr3 (99-189)||(19104821-19104911)
chr3 (99-192)||(17796269-17796362)
chr3 (99-192)||(19104709-19104802)
chr3 (87-186)||(22356075-22356175)
chr3 (15-88)||(39428144-39428221)
chr3 (145-189)||(42696870-42696914)
chr3 (17-88)||(19348794-19348865)
chr3 (18-88)||(27676677-27676747)
chr3 (15-84)||(29067522-29067590)
chr3 (32-88)||(6136401-6136457)
chr3 (32-88)||(17796806-17796862)
chr3 (32-88)||(19105246-19105302)
chr3 (16-55)||(8560351-8560390)
chr3 (16-55)||(18014187-18014226)
chr3 (16-55)||(19348749-19348788)
chr3 (16-55)||(21553786-21553825)
chr3 (116-191)||(25614037-25614112)
chr3 (21-80)||(28136011-28136070)
chr3 (99-189)||(17796490-17796580)
chr3 (99-189)||(19104930-19105020)
chr3 (16-53)||(8592293-8592330)
chr3 (32-88)||(27090683-27090739)
chr3 (15-55)||(30727674-30727714)
chr3 (34-82)||(41671426-41671474)
[»] chr7 (62 HSPs)
chr7 (82-189)||(26281327-26281434)
chr7 (82-189)||(8346551-8346658)
chr7 (82-189)||(22687682-22687789)
chr7 (82-189)||(8330063-8330170)
chr7 (82-189)||(27221422-27221529)
chr7 (82-189)||(44944863-44944974)
chr7 (82-189)||(5715294-5715400)
chr7 (82-189)||(9685262-9685369)
chr7 (82-189)||(11326390-11326497)
chr7 (86-189)||(24725499-24725602)
chr7 (82-189)||(24990089-24990196)
chr7 (82-185)||(39182268-39182370)
chr7 (91-184)||(11324988-11325081)
chr7 (89-189)||(5058533-5058633)
chr7 (82-186)||(8571250-8571354)
chr7 (82-189)||(4247360-4247467)
chr7 (86-189)||(8343822-8343925)
chr7 (82-189)||(21846444-21846550)
chr7 (82-189)||(7730361-7730467)
chr7 (82-189)||(14055255-14055362)
chr7 (82-189)||(14365283-14365390)
chr7 (15-88)||(17811589-17811662)
chr7 (14-88)||(5715526-5715600)
chr7 (15-88)||(24989589-24989661)
chr7 (16-89)||(27221654-27221727)
chr7 (17-89)||(23618246-23618318)
chr7 (17-84)||(8304331-8304398)
chr7 (17-89)||(25842548-25842620)
chr7 (14-88)||(44944659-44944733)
chr7 (15-88)||(9685109-9685182)
chr7 (15-88)||(20570700-20570773)
chr7 (90-189)||(30294179-30294275)
chr7 (82-153)||(1977692-1977763)
chr7 (82-165)||(17811375-17811458)
chr7 (14-88)||(24725286-24725360)
chr7 (126-176)||(26617538-26617588)
chr7 (15-88)||(5058770-5058842)
chr7 (32-88)||(39182397-39182453)
chr7 (21-88)||(4247597-4247664)
chr7 (10-85)||(11326527-11326602)
chr7 (90-189)||(21157800-21157899)
chr7 (86-173)||(27509965-27510052)
chr7 (107-189)||(8630001-8630083)
chr7 (120-189)||(4574475-4574544)
chr7 (32-85)||(26565380-26565433)
chr7 (32-88)||(1977790-1977845)
chr7 (32-84)||(8329876-8329928)
chr7 (15-87)||(17741886-17741958)
chr7 (16-55)||(1981217-1981256)
chr7 (16-55)||(25842625-25842664)
chr7 (17-55)||(8254001-8254039)
chr7 (101-187)||(8303423-8303509)
chr7 (34-88)||(14055498-14055552)
chr7 (34-88)||(14365526-14365580)
chr7 (137-187)||(20570952-20571002)
chr7 (18-88)||(22687085-22687155)
chr7 (35-84)||(8329814-8329863)
chr7 (131-184)||(17809440-17809493)
chr7 (32-88)||(4574971-4575027)
chr7 (32-80)||(7730191-7730239)
chr7 (32-84)||(8343634-8343686)
chr7 (32-84)||(8346363-8346415)
[»] chr4 (42 HSPs)
chr4 (82-189)||(5361981-5362088)
chr4 (82-189)||(8011234-8011341)
chr4 (82-188)||(8889233-8889339)
chr4 (89-189)||(7044731-7044831)
chr4 (82-189)||(13551640-13551747)
chr4 (82-189)||(17466083-17466190)
chr4 (82-189)||(36120828-36120935)
chr4 (101-189)||(13023571-13023660)
chr4 (100-189)||(24719521-24719610)
chr4 (90-189)||(9770116-9770215)
chr4 (82-189)||(10142903-10143010)
chr4 (108-189)||(5375668-5375749)
chr4 (15-88)||(9770353-9770426)
chr4 (90-189)||(4156767-4156866)
chr4 (89-191)||(7815559-7815661)
chr4 (82-189)||(9911429-9911537)
chr4 (89-189)||(18459733-18459833)
chr4 (14-85)||(5375909-5375980)
chr4 (82-189)||(23064981-23065088)
chr4 (21-88)||(55476229-55476296)
chr4 (115-192)||(6347115-6347192)
chr4 (15-88)||(8010951-8011024)
chr4 (89-189)||(7452424-7452523)
chr4 (23-88)||(36121064-36121129)
chr4 (20-76)||(8367455-8367511)
chr4 (22-88)||(23064783-23064849)
chr4 (82-189)||(37240266-37240368)
chr4 (15-88)||(9911226-9911299)
chr4 (15-88)||(13551487-13551560)
chr4 (91-187)||(9149762-9149858)
chr4 (32-88)||(37240480-37240536)
chr4 (10-88)||(13023799-13023877)
chr4 (18-84)||(6346773-6346839)
chr4 (32-86)||(10394853-10394907)
chr4 (34-87)||(4157269-4157322)
chr4 (34-87)||(4157556-4157609)
chr4 (35-88)||(7045004-7045057)
chr4 (32-88)||(5361797-5361853)
chr4 (32-88)||(10143141-10143197)
chr4 (32-85)||(7452750-7452802)
chr4 (44-88)||(24719816-24719860)
chr4 (128-188)||(46664421-46664481)
[»] chr8 (49 HSPs)
chr8 (82-189)||(15294674-15294781)
chr8 (82-189)||(15475043-15475150)
chr8 (82-192)||(31424164-31424274)
chr8 (82-190)||(3094271-3094379)
chr8 (82-189)||(5922053-5922160)
chr8 (82-189)||(17646997-17647104)
chr8 (82-189)||(45403033-45403140)
chr8 (82-189)||(19704473-19704581)
chr8 (82-189)||(11879604-11879711)
chr8 (82-189)||(11897020-11897127)
chr8 (82-181)||(22910220-22910319)
chr8 (82-189)||(29384334-29384441)
chr8 (15-88)||(45403270-45403343)
chr8 (17-89)||(2040359-2040431)
chr8 (14-88)||(7489097-7489171)
chr8 (15-88)||(19704272-19704345)
chr8 (17-85)||(7262006-7262074)
chr8 (118-189)||(477101-477172)
chr8 (86-189)||(27836486-27836589)
chr8 (17-88)||(40541637-40541708)
chr8 (91-189)||(15761466-15761564)
chr8 (90-154)||(6810861-6810925)
chr8 (21-85)||(15294913-15294977)
chr8 (21-85)||(15475282-15475346)
chr8 (17-89)||(16752263-16752335)
chr8 (90-186)||(24056594-24056690)
chr8 (14-82)||(27836113-27836181)
chr8 (146-192)||(23136350-23136396)
chr8 (15-88)||(24414102-24414175)
chr8 (22-87)||(32424576-32424641)
chr8 (82-144)||(23142224-23142286)
chr8 (15-88)||(5922289-5922362)
chr8 (15-88)||(11879841-11879914)
chr8 (15-88)||(11897257-11897330)
chr8 (15-88)||(23142415-23142488)
chr8 (88-184)||(15231733-15231829)
chr8 (32-88)||(15761190-15761246)
chr8 (82-189)||(6292360-6292467)
chr8 (108-192)||(7489331-7489412)
chr8 (18-88)||(17647238-17647308)
chr8 (10-84)||(29384122-29384196)
chr8 (16-55)||(2040315-2040354)
chr8 (32-83)||(17566344-17566395)
chr8 (18-88)||(15231862-15231932)
chr8 (35-85)||(24056405-24056455)
chr8 (132-186)||(30240697-30240751)
chr8 (120-173)||(1018318-1018371)
chr8 (148-189)||(9036757-9036798)
chr8 (16-53)||(40541714-40541751)
[»] chr5 (32 HSPs)
chr5 (82-189)||(43234872-43234979)
chr5 (82-189)||(19578946-19579053)
chr5 (83-189)||(23172451-23172557)
chr5 (82-189)||(18051548-18051655)
chr5 (82-189)||(18843719-18843826)
chr5 (82-189)||(20923722-20923829)
chr5 (86-189)||(22645741-22645844)
chr5 (82-189)||(21059174-21059280)
chr5 (82-185)||(27340204-27340307)
chr5 (82-189)||(38158272-38158379)
chr5 (17-84)||(15051914-15051981)
chr5 (17-88)||(41427660-41427731)
chr5 (119-189)||(19042444-19042514)
chr5 (15-85)||(18843959-18844029)
chr5 (15-88)||(41688481-41688554)
chr5 (15-88)||(19377844-19377917)
chr5 (15-88)||(43235109-43235182)
chr5 (18-86)||(19579186-19579254)
chr5 (120-192)||(24106642-24106714)
chr5 (82-182)||(41688683-41688782)
chr5 (14-88)||(19042242-19042316)
chr5 (15-85)||(20321187-20321257)
chr5 (15-75)||(22645542-22645602)
chr5 (127-189)||(20320928-20320990)
chr5 (15-84)||(27340002-27340071)
chr5 (82-144)||(19979648-19979710)
chr5 (42-88)||(22984643-22984689)
chr5 (15-88)||(18051348-18051421)
chr5 (44-88)||(23172272-23172316)
chr5 (34-88)||(43005693-43005747)
chr5 (32-85)||(24648253-24648306)
chr5 (15-51)||(6852381-6852417)
[»] chr1 (50 HSPs)
chr1 (82-189)||(9955053-9955160)
chr1 (82-189)||(23528660-23528767)
chr1 (82-189)||(42180083-42180190)
chr1 (82-192)||(13100192-13100302)
chr1 (82-189)||(19009964-19010071)
chr1 (82-189)||(21846286-21846393)
chr1 (82-189)||(41032688-41032795)
chr1 (99-189)||(25146803-25146893)
chr1 (82-189)||(12513285-12513392)
chr1 (82-189)||(9327233-9327340)
chr1 (82-189)||(9352081-9352188)
chr1 (82-189)||(13276284-13276391)
chr1 (86-189)||(18304832-18304936)
chr1 (118-189)||(30619079-30619150)
chr1 (15-88)||(21846089-21846162)
chr1 (89-189)||(18337547-18337646)
chr1 (82-192)||(16125473-16125586)
chr1 (82-187)||(17056017-17056122)
chr1 (24-88)||(23528897-23528961)
chr1 (21-88)||(17055740-17055807)
chr1 (107-189)||(14074413-14074495)
chr1 (15-88)||(16125270-16125343)
chr1 (15-88)||(19009763-19009836)
chr1 (89-189)||(27917477-27917577)
chr1 (106-189)||(12800623-12800706)
chr1 (15-85)||(9351878-9351948)
chr1 (19-88)||(13100431-13100500)
chr1 (15-88)||(14074298-14074371)
chr1 (15-88)||(25146583-25146656)
chr1 (17-85)||(17197346-17197414)
chr1 (89-189)||(24117011-24117111)
chr1 (82-189)||(9128858-9128965)
chr1 (18-85)||(17869568-17869635)
chr1 (15-65)||(9954848-9954898)
chr1 (15-88)||(9128653-9128726)
chr1 (82-194)||(17869768-17869875)
chr1 (13-64)||(9321548-9321599)
chr1 (127-189)||(34478833-34478895)
chr1 (15-84)||(16434754-16434823)
chr1 (32-88)||(18304643-18304699)
chr1 (15-82)||(42179886-42179953)
chr1 (89-182)||(8772715-8772809)
chr1 (15-53)||(12002752-12002790)
chr1 (15-69)||(27502170-27502224)
chr1 (17-88)||(12002678-12002747)
chr1 (142-189)||(12003241-12003288)
chr1 (18-84)||(47786103-47786169)
chr1 (148-189)||(47785796-47785837)
chr1 (101-185)||(27502239-27502323)
chr1 (48-88)||(30619183-30619223)
[»] chr2 (45 HSPs)
chr2 (82-189)||(1404787-1404894)
chr2 (82-189)||(23863339-23863446)
chr2 (82-189)||(30432423-30432530)
chr2 (82-189)||(31237995-31238102)
chr2 (82-189)||(35565972-35566079)
chr2 (82-189)||(25539244-25539351)
chr2 (82-189)||(36429852-36429959)
chr2 (15-88)||(19262131-19262204)
chr2 (17-89)||(7302022-7302094)
chr2 (17-89)||(27523913-27523985)
chr2 (86-189)||(31578009-31578111)
chr2 (85-188)||(15588871-15588973)
chr2 (82-189)||(20063718-20063825)
chr2 (87-189)||(1690785-1690887)
chr2 (15-88)||(20063964-20064037)
chr2 (15-88)||(30433056-30433129)
chr2 (17-89)||(20034039-20034111)
chr2 (15-88)||(1405024-1405097)
chr2 (15-88)||(21869136-21869209)
chr2 (15-88)||(31237791-31237864)
chr2 (17-88)||(974579-974651)
chr2 (17-89)||(34578129-34578201)
chr2 (82-189)||(19491859-19491967)
chr2 (94-189)||(16766714-16766809)
chr2 (90-165)||(34841584-34841659)
chr2 (21-88)||(36430089-36430156)
chr2 (115-189)||(19245157-19245231)
chr2 (91-157)||(31023259-31023325)
chr2 (88-189)||(15266086-15266187)
chr2 (15-88)||(25538960-25539033)
chr2 (121-188)||(27406782-27406851)
chr2 (90-157)||(5395674-5395741)
chr2 (106-189)||(27750194-27750277)
chr2 (16-55)||(34578085-34578124)
chr2 (91-189)||(17995059-17995157)
chr2 (15-88)||(19245830-19245903)
chr2 (15-55)||(20034115-20034155)
chr2 (89-183)||(13503067-13503162)
chr2 (114-189)||(15516609-15516684)
chr2 (149-192)||(15627656-15627699)
chr2 (16-55)||(27523990-27524029)
chr2 (32-87)||(27749341-27749396)
chr2 (15-76)||(34167541-34167603)
chr2 (35-88)||(16767026-16767079)
chr2 (34-82)||(15627991-15628039)
[»] scaffold0186 (2 HSPs)
scaffold0186 (82-189)||(8447-8554)
scaffold0186 (15-88)||(8682-8755)
[»] scaffold0417 (2 HSPs)
scaffold0417 (82-182)||(7473-7573)
scaffold0417 (15-84)||(7270-7339)
[»] scaffold0510 (1 HSPs)
scaffold0510 (82-181)||(118-218)
[»] scaffold0079 (2 HSPs)
scaffold0079 (17-89)||(14743-14815)
scaffold0079 (16-55)||(14820-14859)
[»] scaffold0048 (4 HSPs)
scaffold0048 (91-189)||(48816-48913)
scaffold0048 (91-153)||(61410-61472)
scaffold0048 (43-88)||(48505-48550)
scaffold0048 (32-88)||(61146-61202)
[»] scaffold0042 (2 HSPs)
scaffold0042 (82-189)||(93724-93829)
scaffold0042 (34-88)||(93539-93593)
[»] scaffold0036 (1 HSPs)
scaffold0036 (89-189)||(37191-37291)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-89)||(38341-38415)
[»] scaffold0027 (2 HSPs)
scaffold0027 (28-89)||(132943-133004)
scaffold0027 (16-53)||(133009-133046)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-88)||(56240-56313)
[»] scaffold0061 (1 HSPs)
scaffold0061 (14-89)||(76123-76197)
[»] scaffold0603 (2 HSPs)
scaffold0603 (115-189)||(9071-9145)
scaffold0603 (18-84)||(8777-8843)
[»] scaffold0028 (1 HSPs)
scaffold0028 (10-88)||(145829-145907)
[»] scaffold0115 (1 HSPs)
scaffold0115 (120-189)||(35115-35184)
[»] scaffold0182 (1 HSPs)
scaffold0182 (17-89)||(24626-24698)
[»] scaffold2084 (1 HSPs)
scaffold2084 (17-76)||(81-140)
[»] scaffold0150 (1 HSPs)
scaffold0150 (34-88)||(33179-33233)
[»] scaffold0163 (1 HSPs)
scaffold0163 (116-189)||(2392-2465)
[»] scaffold0534 (1 HSPs)
scaffold0534 (32-83)||(916-967)
[»] scaffold0526 (2 HSPs)
scaffold0526 (16-55)||(8352-8391)
scaffold0526 (21-84)||(8401-8464)
[»] scaffold0684 (1 HSPs)
scaffold0684 (116-182)||(5653-5719)


Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 86 - 368
Target Start/End: Original strand, 26053318 - 26053605
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  26053318 gatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttg 26053417  T
Q  186 acaataagtac------gtatatctgactttctattttcctactgaatccattttcgggtcaatccaaacccaatttcaatgatgtggagtaatgtaaaa 279  Q
    |||| || |||      |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26053418 acaacaa-tacttagtagtatatctaactttctattttcctaatgaatccattttcgggtcaatccaaacccaatttcaatgatgtggagtaatgtaaaa 26053516  T
Q  280 tatgggggtgtcgatatcatgtttcaaatcattgctgtttgcaacgacaccacaactcattgtcaatagaagctcatcctcttctcatc 368  Q
    |||||||| ||||||  |||||| ||||||||  ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26053517 tatgggggcgtcgattgcatgttccaaatcatcactgttcgcagcgacaccacaactcattgtcaatagaagctcgtcctcttctcatc 26053605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 86 - 368
Target Start/End: Original strand, 26073371 - 26073658
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  26073371 gatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttg 26073470  T
Q  186 acaataagtac------gtatatctgactttctattttcctactgaatccattttcgggtcaatccaaacccaatttcaatgatgtggagtaatgtaaaa 279  Q
    |||| || |||      |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26073471 acaacaa-tacttagtagtatatctaactttctattttcctaatgaatccattttcgggtcaatccaaacccaatttcaatgatgtggagtaatgtaaaa 26073569  T
Q  280 tatgggggtgtcgatatcatgtttcaaatcattgctgtttgcaacgacaccacaactcattgtcaatagaagctcatcctcttctcatc 368  Q
    |||||||| ||||||  |||||| ||||||||  ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26073570 tatgggggcgtcgattgcatgttccaaatcatcactgttcgcagcgacaccacaactcattgtcaatagaagctcgtcctcttctcatc 26073658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 30912430 - 30912537
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  30912430 aatctatggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggat 30912529  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  30912530 tttgacaa 30912537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 6943478 - 6943585
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||  ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6943478 aatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggat 6943577  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  6943578 tttgacaa 6943585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 7918399 - 7918506
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||| |||||||||||| || ||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7918399 aatcgattgattttgcttatgttaggattttactatggatttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggat 7918498  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  7918499 tttgacaa 7918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 15528128 - 15528235
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||  ||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15528128 aatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggat 15528227  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  15528228 tttgacaa 15528235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 17250168 - 17250061
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  17250168 aatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttaggatttaagtcgggat 17250069  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  17250068 tttaacaa 17250061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 17543766 - 17543865
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||||||||  ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  17543766 gattttgcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaa 17543865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 27233295 - 27233402
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |     
T  27233295 aatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcggtag 27233394  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  27233395 tttgacaa 27233402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 23897922 - 23897823
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||| || |||||| | ||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  23897922 aatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcgggat 23897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 10509041 - 10509151
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||||||||||||| |||  ||||||||| ||||| |||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  10509041 aatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggat 10509140  T
Q  182 tttgacaataa 192  Q
    |||||||||||    
T  10509141 tttgacaataa 10509151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 26053110 - 26053184
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  26053110 aaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 26053184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 26073163 - 26073237
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  26073163 aaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 26073237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 7223623 - 7223523
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||       |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  7223623 aatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggat 7223531  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  7223530 tttgacaa 7223523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 7223829 - 7223756
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7223829 aatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 7223756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 19748647 - 19748574
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  19748647 aatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 19748574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 2912266 - 2912372
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||||||||||  ||||||| |||| |||||| ||||||||| || ||||||| |||||||||| |||||||  ||||||||||||||    
T  2912266 aatcgatgaattttgcttattttaagattctactatg-atttgaatcgttgaagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggat 2912364  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  2912365 tttgacaa 2912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 11327589 - 11327696
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||| ||||||||  ||||||| | || |||||||  |||||||||||||    
T  11327589 aatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggat 11327688  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  11327689 tttgacaa 11327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 18491074 - 18491161
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| ||| ||||||| |||||||||||||||||||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgaca 18491161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 3573984 - 3574054
Alignment:
Q  116 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttga 186  Q
    |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttga 3574054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 5422803 - 5422873
Alignment:
Q  119 gatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  5422803 gatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaa 5422873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 15527924 - 15527998
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  15527924 aaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 15527998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11327377 - 11327450
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||| |||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||    
T  11327377 aatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgat 11327450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 17103306 - 17103206
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||||||||| |||       ||||||||||||||||||||  ||||||||||||||    
T  17103306 aatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagtg-------tcgcaaaatcctgaattttaagatttaagtcgggat 17103214  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  17103213 tttgacaa 17103206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 17543545 - 17543618
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||| |||||| | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  17543545 aatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 17543618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 22498255 - 22498328
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  22498255 aatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagacttttgtagaatcgat 22498328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 22498903 - 22499006
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||| |||| || ||||||||||||||||| ||||||||||||||||||||||  || | ||||| |||| ||| |||||    
T  22498903 aatcgatggattttgtctattttgagattgtactatggatttgagtcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggat 22499002  T
Q  182 tttg 185  Q
    ||||    
T  22499003 tttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 19748444 - 19748340
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||||  ||||||| || ||||||||||| || |||||||||||| || |||||||||| ||| ||  ||||||||||||||    
T  19748444 aatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcgggat 19748345  T
Q  182 tttga 186  Q
    |||||    
T  19748344 tttga 19748340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 7918165 - 7918235
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||| |||| ||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||    
T  7918165 aatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggacttttgtagaatc 7918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 17103509 - 17103436
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||| ||||||| ||||||||||||| |||||||| | |||| |||||||||||| ||||||||||||||||||    
T  17103509 aataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggacttttgtagaatcgat 17103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 27614471 - 27614531
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgactt 75  Q
    ||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  27614471 aatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaatgactt 27614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaa 173  Q
    ||||||| |||| |||||||||  || ||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 27890694 - 27890627
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| || ||||||||||| | ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  27890694 aaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaaggacttttgtagaatcgat 27890627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 21354848 - 21354786
Alignment:
Q  85 cgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtc 147  Q
    ||||||||||||  |||||||||||||||  |||||||| ||||||||||||| |||||||||    
T  21354848 cgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaagtc 21354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 27233119 - 27233185
Alignment:
Q  20 caaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcg 86  Q
    |||||||||||||| |||||| ||||||||||| ||| |||||||||||| | |||| |||||||||    
T  27233119 caaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtctttagtagaatcg 27233185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 3573715 - 3573784
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||||||||| ||||||||||||| ||||||||||||| | || |||||||||  ||| |||||||||    
T  3573715 aatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaactactcttgtagaat 3573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 10958239 - 10958312
Alignment:
Q  116 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||| || ||||||||||   ||||||||||||||||||||||   |||||||||| |||||||||||    
T  10958239 atggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaa 10958312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 18490998 - 18491064
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaga 167  Q
    |||| |||||||  |||||||||||||| ||||||||||| ||||| ||||||| ||| ||||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttaga 18491064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 31108469 - 31108395
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||||| || ||||||||  |||||||||||| || ||||||||| || |||||||||| ||| ||||    
T  31108469 aatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgtacaatagatg 31108395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 8545030 - 8545087
Alignment:
Q  129 gttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttga 186  Q
    |||||| ||||  |||||||||||||||| |||||||| |||||| ||||||||||||    
T  8545030 gttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 27890225 - 27890138
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||  ||||||||||||||||| ||| |  | |||||||||||| |||||||||| | | |||||||  |||||||||||    
T  27890225 ttttgggattctgatatggatttgagtcgttaaagctacacaaagtcgcaaaaacctgaattttgggacttaagtc-agattttgacaa 27890138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 33583766 - 33583854
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||| ||||  ||||||||||||||||||||| | |  ||||||  ||||||||| ||||| | | |||||||| |||||||||||    
T  33583766 ttttgggtttctgctatggatttgagtcgttgaagctaattaaagtctaaaaatcctggattttgggacttaagtcgcgattttgacaa 33583854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 8285776 - 8285843
Alignment:
Q  117 tggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    ||||||||||||||||||| |  |  |||||||||||||||| ||||||| | |||||||| ||||||    
T  8285776 tggatttgagtcgttgaagctagatcaagtcgcaaaatcctggattttaggacttaagtcgcgatttt 8285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 27890621 - 27890582
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  27890621 atagcaaaatcaggactcgtaaaatcgcaatcaaaatcga 27890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 18490922 - 18490988
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaga 167  Q
    |||||||||| |  ||||| ||| |||||||||||||||| ||||| ||||||| ||| ||||||||    
T  18490922 ttttgggattatgctatgggtttcagtcgttgaaggtgaataaagttgcaaaatgctggattttaga 18490988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 8275366 - 8275415
Alignment:
Q  36 aaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||| ||||| ||||||||| |||||||||||| |||||||||| ||||    
T  8275366 aaaatcgcaattaaaatcgaaggattttactcaaggacttttgtaaaatc 8275415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 20432408 - 20432481
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||  | ||||||||| ||||||||||| |||  |||||||| ||  | |||||||||||||||    
T  20432408 aatagcaaaatcgaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgat 20432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 21354989 - 21354949
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  21354989 aatagaaaaatcaggactcgtaaaatcgcaatcaaaatcga 21354949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 33583511 - 33583554
Alignment:
Q  44 aatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||    
T  33583511 aatcaaaatcgaa-gattttacttaaggacttttgtagaatcgat 33583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 33592983 - 33593034
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||| |||||| ||||||||||| |||||||||  |||||||||||||    
T  33592983 tcgtaaaattgcaatcgaaatcgaatga-tttactcaactacttttgtagaat 33593034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 29067395 - 29067288
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29067395 aatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 29067296  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  29067295 tttgacaa 29067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 20756150 - 20756043
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||| |||||||| ||||||  ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  20756150 aatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctgaattttataatttaagtcgggat 20756051  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  20756050 tttgacaa 20756043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 28745881 - 28745774
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||  ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  28745881 aatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggat 28745782  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  28745781 tttgacaa 28745774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 21963540 - 21963438
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||| ||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  21963540 aatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggat 21963441  T
Q  182 ttt 184  Q
    |||    
T  21963440 ttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 21985976 - 21985874
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||| ||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  21985976 aatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggat 21985877  T
Q  182 ttt 184  Q
    |||    
T  21985876 ttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 3449310 - 3449416
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||| |||||| |||||||| ||| ||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  3449310 aatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctgaattttaggatttaagtcgggat 3449408  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  3449409 tttgacaa 3449416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 8156148 - 8156256
Alignment:
Q  82 aatcgatggattttg-cttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcggga 180  Q
    ||||||||||||||| || ||||||||||| || |||||||||||||| ||||||||||| ||| ||| ||||| |||||||||||||||||||| ||||    
T  8156148 aatcgatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttggga 8156247  T
Q  181 ttttgacaa 189  Q
    |||||||||    
T  8156248 ttttgacaa 8156256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 39428013 - 39427906
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||| ||||  ||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| | |||||| ||||||| |||||||    
T  39428013 aatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatcgggat 39427914  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  39427913 tttgacaa 39427906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 22137389 - 22137287
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||||||||| || |||||||||||| |||| |||||||||||||||| || ||| |||||||||| ||||||||| ||||    
T  22137389 aatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagtcaggat 22137290  T
Q  182 ttt 184  Q
    |||    
T  22137289 ttt 22137287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 8592213 - 8592287
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  8592213 aaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 8592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28746095 - 28746017
Alignment:
Q  10 aagaaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||  |||||||||||||||||    
T  28746095 aagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaacttttgtagaatcgat 28746017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 3041535 - 3041463
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  3041535 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaaacgatg 3041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 22971121 - 22971049
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  22971121 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatg 22971049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 24620218 - 24620328
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaa---gtcgcaaaatcctgaattttagaatttaagtcgg 178  Q
    |||||||| ||||||| ||||||| ||||||| | || |||||||||||||||||||||||||   ||||||||||| | |||||||| |||||||||||    
T  24620218 aatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcgg 24620317  T
Q  179 gattttgacaa 189  Q
     ||||||||||    
T  24620318 aattttgacaa 24620328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 24649710 - 24649814
Alignment:
Q  86 gatggattttgctt-attttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    |||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||| |||||  ||||||||  ||||||  |||||||||||||||||    
T  24649710 gatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacgatttaagtcgggatttt 24649809  T
Q  185 gacaa 189  Q
    |||||    
T  24649810 gacaa 24649814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 27676460 - 27676360
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||| | ||||||||||||||  |||||||||||||| | ||||||||| ||||||||||||||||| ||||||  ||||||||| |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  189 a 189  Q
    |    
T  27676360 a 27676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 30727709 - 30727813
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| | | ||||||  ||||||||| ||||    
T  30727709 aatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaagatttaagtcaggat 30727808  T
Q  182 tttga 186  Q
    |||||    
T  30727809 tttga 30727813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 17064432 - 17064326
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||  |||||| | |||||| |||| ||| ||||||||||||||||| | | ||||||||||||||||||||  ||||||||||||||    
T  17064432 aatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggat 17064333  T
Q  182 tttgaca 188  Q
    |||||||    
T  17064332 tttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24620012 - 24620085
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  24620012 aatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagacttttgtagaatcgat 24620085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 15806531 - 15806630
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| | ||||||||||||  |||||||||||||| ||||||||||| ||||||||||||| ||| ||| ||| ||||||||| |||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgaca 15806629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 22355881 - 22355954
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||| |||| |||||||||| |||||||    
T  22355881 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggacttttgtaaaatcgat 22355954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 20756331 - 20756263
Alignment:
Q  20 caaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||| || |||||||||||||||    
T  20756331 caaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgat 20756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 10872971 - 10873065
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattt 183  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||||||| ||  || |||||||||| ||||||| |||| | |||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 25870390 - 25870501
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgtt----gaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcg 177  Q
    |||||||||||||||| ||||||| | ||||| || | ||||||||||||    |||| ||||||||||| ||||||| || ||||||| ||||||||||    
T  25870390 aatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagatgaagaaagtcacaaaatcttggattttaggatttaagtcg 25870489  T
Q  178 ggattttgacaa 189  Q
     |||||||||||    
T  25870490 agattttgacaa 25870501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 22494799 - 22494872
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatc 155  Q
    |||||||| |||||| ||||||| |||||||| |||| |||| |||||||||||||||| ||||||||||||||    
T  22494799 aatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatc 22494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 18014303 - 18014243
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgactttt 77  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  18014303 tagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggactttt 18014243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 20766718 - 20766789
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||||||| | |||||| |||||||||    
T  20766718 tagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagggcttttggagaatcgat 20766789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 28135800 - 28135726
Alignment:
Q  115 tatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||  |||| ||||| ||||||||||||||||||||||||  |||||| |||| ||||||||||    
T  28135800 tatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaa 28135726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 8560274 - 8560342
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||||||| ||||||| |||| ||||||||||||||| |||||||||||| |  ||||||||||||    
T  8560274 tagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttttttgtagaatc 8560342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 13006031 - 13005931
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| | |||||||||| |  |||||||||||   ||| |||||||| |||||||||||||  ||||||||  ||||||||||| ||||||||||    
T  13006031 ggattttgcatgttttgggattttgctatggatttgaaatgttaaaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgaca 13005932  T
Q  189 a 189  Q
    |    
T  13005931 a 13005931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 17064626 - 17064551
Alignment:
Q  10 aagaaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||| | ||||||||  | ||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  17064626 aagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatc 17064551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3449128 - 3449198
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||  | ||||||||| |||| |||||||||||||||||| ||||  |||||||||||||||||    
T  3449128 agcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgat 3449198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 13286243 - 13286185
Alignment:
Q  30 actcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||    
T  13286243 actcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgat 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 17796471 - 17796381
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| |||||||  |||| |||||||| ||||||| |||| ||||||| ||||||||  ||||||  ||||||||||| ||||||||||    
T  17796471 tattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaa 17796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 19104911 - 19104821
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| |||||||  |||| |||||||| ||||||| |||| ||||||| ||||||||  ||||||  ||||||||||| ||||||||||    
T  19104911 tattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaa 19104821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 17796362 - 17796269
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    |||||| |||||||  |||| |||| ||| |||||||||||| |||||| |||||||||  ||||||  |||||||| || |||||||||||||    
T  17796362 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 17796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 19104802 - 19104709
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    |||||| |||||||  |||| |||| ||| |||||||||||| |||||| |||||||||  ||||||  |||||||| || |||||||||||||    
T  19104802 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 19104709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 22356075 - 22356175
Alignment:
Q  87 atggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaag-tcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    |||||||||||||||||| |||||||| |||| |||  | | ||||||| |||| |||  ||  ||||||||||||||||| ||||||||||| ||||||    
T  22356075 atggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaaatcttaaaatcctgaattttaggatttaagtcggaattttg 22356174  T
Q  186 a 186  Q
    |    
T  22356175 a 22356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 39428221 - 39428144
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatca----aaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||| |||||| |||||||    |||||||| |||||||||||| || |||||| ||||||||    
T  39428221 aatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagatttttgtggaatcgat 39428144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 42696914 - 42696870
Alignment:
Q  145 gtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  42696914 gtcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 19348865 - 19348794
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||| |||||||||||| ||||||||||| ||| ||||||| | || ||||||| || |||||||    
T  19348865 tagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggacttttataaaatcgat 19348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 27676747 - 27676677
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||  | || |||||| ||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  27676747 agcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactacttttgtaaaatcgat 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 29067590 - 29067522
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||||||||||| |||| ||||||  |||||||| ||||| |||||||||||| || |||||||||||    
T  29067590 aatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggatttttgtagaat 29067522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 6136401 - 6136457
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| |||||||||||| || ||||||||||||  |||||| ||||||||||    
T  6136401 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgat 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 17796862 - 17796806
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||||| |||||||||  |||||||||||  |||||||||||||||||    
T  17796862 tcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgat 17796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 19105302 - 19105246
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||||| |||||||||  |||||||||||  |||||||||||||||||    
T  19105302 tcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgat 19105246  T

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Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 8560351 - 8560390
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  8560351 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 8560390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18014226 - 18014187
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  18014226 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 18014187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 19348788 - 19348749
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  19348788 atagcaaattcgggactcgtaaaatcgcaatcaaaatcga 19348749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 21553786 - 21553825
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  21553786 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 21553825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 25614037 - 25614112
Alignment:
Q  116 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaata 191  Q
    |||||||||| |||| ||| ||||  |||||||||||||| |  |||||| |||||||||| ||||||| ||||||    
T  25614037 atggatttgaatcgtcgaaagtgagcaaagtcgcaaaatcatagattttaaaatttaagtcaggatttttacaata 25614112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 28136070 - 28136011
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgta 80  Q
    ||||||| || ||||||||| || |||||||||||| ||||||||||||  |||||||||    
T  28136070 aaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgta 28136011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 17796580 - 17796490
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| |||||||  |||| |||| ||| |||||||||||| ||||||| ||||||||  ||||||  |||||| |||  ||||||||||    
T  17796580 tattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaa 17796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 19105020 - 19104930
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| |||||||  |||| |||| ||| |||||||||||| ||||||| ||||||||  ||||||  |||||| |||  ||||||||||    
T  19105020 tattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaa 19104930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 8592293 - 8592330
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatc 53  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  8592293 atagcaaaatcgggtctcgtaaaatcgcaatcaaaatc 8592330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 27090739 - 27090683
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||| || ||||| ||||||||| |||||||||||| || ||||||| |||||||    
T  27090739 tcgtaagatcgcaataaaaatcgaaggattttactcaaggaattttgtataatcgat 27090683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 30727674 - 30727714
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    ||||||||||||| ||||| |||||| ||||||||||||||    
T  30727674 aatagcaaaatcgagactcctaaaatcgcaatcaaaatcga 30727714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 41671474 - 41671426
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtaga 82  Q
    ||||||| |||| |||||||||| ||||||||||||  |||||||||||    
T  41671474 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtaga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 8e-40; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 26281327 - 26281434
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||    
T  26281327 aatcgatggattttgcttattttggaattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaat 26281426  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  26281427 tttgacaa 26281434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 8346551 - 8346658
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||    
T  8346551 aatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggat 8346650  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  8346651 tttgacaa 8346658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 22687682 - 22687789
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| ||||||||||||||   |||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  22687682 aatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggat 22687781  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  22687782 tttgacaa 22687789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 8330063 - 8330170
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||| ||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  8330063 aatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggat 8330162  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  8330163 tttgacaa 8330170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 27221529 - 27221422
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||  |||||  ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  27221529 aatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggat 27221430  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  27221429 tttaacaa 27221422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 44944863 - 44944974
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtga----agaaagtcgcaaaatcctgaattttagaatttaagtcg 177  Q
    |||||||||||||||  |||||| |||||||| ||||||||||| |||||||||||||    ||||||||||||||||||||||||||| ||||||||||    
T  44944863 aatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcg 44944962  T
Q  178 ggattttgacaa 189  Q
    ||||||||||||    
T  44944963 ggattttgacaa 44944974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 5715400 - 5715294
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| |||||||||||||||| |||||| |||| |||| ||| |||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  5715400 aatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggat 5715302  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  5715301 tttgacaa 5715294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 9685262 - 9685369
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  |||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||    
T  9685262 aatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttaggatataagtcgagat 9685361  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  9685362 tttgacaa 9685369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 11326497 - 11326390
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||| |||||||| ||||||  ||||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  11326497 aatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggat 11326398  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  11326397 tttgacaa 11326390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 24725499 - 24725602
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    |||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||| || ||||||| ||||||||| ||||||||    
T  24725499 gatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttg 24725598  T
Q  186 acaa 189  Q
    ||||    
T  24725599 acaa 24725602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 24990089 - 24990196
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||| | ||||||||||| ||    
T  24990089 aatcgatggattttgcctattttaggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaat 24990188  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  24990189 tttgacaa 24990196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 39182370 - 39182268
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||| ||||    
T  39182370 aatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctagattttaggatttaagtcaggat 39182272  T
Q  182 tttg 185  Q
    ||||    
T  39182271 tttg 39182268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 11325081 - 11324988
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||||    
T  11325081 attttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 5058633 - 5058533
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| ||||||  ||||||| |||||||||  ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  5058633 ggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgaca 5058534  T
Q  189 a 189  Q
    |    
T  5058533 a 5058533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 8571354 - 8571250
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||| ||||   |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  8571354 aatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatgatttaagtcgggat 8571255  T
Q  182 tttga 186  Q
    |||||    
T  8571254 tttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 4247467 - 4247360
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||||||||||||| ||||||||| ||| |||||| |||||||||||  |||||||||||||||||| |||||| | |||||    
T  4247467 aatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggat 4247368  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  4247367 tttgacaa 4247360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 8343822 - 8343925
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| | |  |||||||    
T  8343822 gatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttg 8343921  T
Q  186 acaa 189  Q
    ||||    
T  8343922 acaa 8343925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 21846444 - 21846550
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||| |||||| | | |||| | |||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  21846444 aatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaagtcgggat 21846542  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  21846543 tttgacaa 21846550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 7730361 - 7730467
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||| | |||||||| |||||| | ||||||||||| ||| ||||||||||||||||||||| |||| ||||||| ||||||||| ||||    
T  7730361 aatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggat 7730459  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  7730460 tttgacaa 7730467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 14055362 - 14055255
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||| |||||| | |||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||| || ||||| |||||    
T  14055362 aatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggat 14055263  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  14055262 tttcacaa 14055255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 14365390 - 14365283
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||| |||||| | |||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||| || ||||| |||||    
T  14365390 aatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggat 14365291  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  14365290 tttcacaa 14365283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 17811662 - 17811589
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  17811662 aatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgat 17811589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 5715600 - 5715526
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||| |||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||    
T  5715600 aaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttgtagaatcgat 5715526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24989589 - 24989661
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  24989589 aataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttgtagaatcgat 24989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 27221727 - 27221654
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||||||||   |||||||||||||||||||    
T  27221727 atagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgtagaatcgatg 27221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 23618246 - 23618318
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||  ||||| |||||||||||||||  ||||||||||| |||||||||||||||||||    
T  23618246 tagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgatg 23618318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 8304398 - 8304331
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||||| ||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||    
T  8304398 tagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttttgtagaat 8304331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 25842548 - 25842620
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| ||||||||||| | | |||||||||||   ||||||||||||||||||    
T  25842548 tagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaacttttgtagaatcgatg 25842620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 44944659 - 44944733
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||  ||||||||||||||| ||||| |||||||||  |||||||| || ||||||||||||||||||    
T  44944659 aaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggacttttgtagaatcgat 44944733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 9685109 - 9685182
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||  |||||||||||| ||||| ||||||||| |||||||||| | ||||||| ||||||||||    
T  9685109 aatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgat 9685182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 20570700 - 20570773
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||| |||||| | ||||| |||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  20570700 aataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttttgtagaatcgat 20570773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 30294275 - 30294179
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||| ||||||| |||| |  |||||||||||||||   |||||||| ||| || |||||||||| ||||||| |||||||| |||||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaa 30294179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 1977763 - 1977692
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaa 153  Q
    |||||| | ||||||| |||||| |||||||| |||||||||||||||||||||||| | ||| ||||||||    
T  1977763 aatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 17811458 - 17811375
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaatttta 165  Q
    ||||||| |||||||  ||||||   |||||| |||||||||||||||||||||||||| |||||| |||||||  ||||||||    
T  17811458 aatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcaagaatttta 17811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 24725286 - 24725360
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| || || |||  |||||| |||||||||||| || |||||||||||| ||||||||||||||||||    
T  24725286 aaatagcaatattggaacttttaaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgat 24725360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 26617538 - 26617588
Alignment:
Q  126 gtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtc 176  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  26617538 gtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtc 26617588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 5058842 - 5058770
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||| | ||||||||| ||||||||||||||| ||||||| |||| || |||||| ||||||||    
T  5058842 aatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaattttgt-gaatcgat 5058770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 39182453 - 39182397
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| |||| |||||||||| ||||||||||||  |||||||||||||||||    
T  39182453 tcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgat 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 4247664 - 4247597
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||| ||||||||| ||||||||| || || |||||||||||| || |||||||||||||||    
T  4247664 aaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttgtagaatcgat 4247597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 11326602 - 11326527
Alignment:
Q  10 aagaaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||| ||||||||||| ||||||| ||||||  |||||||||| |||  ||||||||||| ||||||||| |||||    
T  11326602 aagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggacttttgtggaatc 11326527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 21157800 - 21157899
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| ||| |||| ||||| |  |||||||||||||||||| | ||||  |||||||||||| |||||||||||  ||||||||| | |||| |||||    
T  21157800 gatttttcttgttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaa 21157899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 27509965 - 27510052
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaa 173  Q
    |||| ||||||| ||||||   |||||| ||| ||||||| |||||| | ||||||||| ||||||||||||  ||||||||||||||    
T  27509965 gatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaatcctttattttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 8630001 - 8630083
Alignment:
Q  107 gattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||| ||||||||||||||||||||| | |  ||||| ||||||||||  ||||| | | |||||||| |||||||||||    
T  8630001 gattctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaa 8630083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 4574544 - 4574475
Alignment:
Q  120 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| |||||||||||||  ||||||||||||| ||| ||||||| |||||||||  |||||| ||||    
T  4574544 atttgaatcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgattttcacaa 4574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 26565380 - 26565433
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||||| | ||||||||||||| ||||||||||||  ||||||||||||||    
T  26565380 tcgtaaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatc 26565433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 1977845 - 1977790
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||||||||||||||| ||||||||||||| | |||| ||||||||||    
T  1977845 tcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgat 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8329876 - 8329928
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||| |||||||||||| || ||||||||||||  |||||||||||||    
T  8329876 tcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaat 8329928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 17741958 - 17741886
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcga 87  Q
    |||||||||||||  | ||||||||| ||||||||||| ||| ||||||||| ||  |||||| |||||||||    
T  17741958 aatagcaaaatcgaaaatcgtaaaattgcaatcaaaattgaaggattttacttaactacttttttagaatcga 17741886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 1981217 - 1981256
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  1981217 atagcaaagtcgggactcgtaaaattgcaatcaaaatcga 1981256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 25842625 - 25842664
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  25842625 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 25842664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 8254001 - 8254039
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  8254001 tagcaaaatcgagactcgtaaaatcgcaatcaaaatcga 8254039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 8303509 - 8303423
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgac 187  Q
    ||||| |||||| ||||| |||||||||||||||| |    |||||||||||| ||||||||||   | |||||||| |||||||||    
T  8303509 ttttgagattctgttatgaatttgagtcgttgaagctacgcaaagtcgcaaaaacctgaattttgagacttaagtcgcgattttgac 8303423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 14055552 - 14055498
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||| |||| |||||||||| ||||||||||||  |||||||||||| ||||    
T  14055552 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgat 14055498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 14365580 - 14365526
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||| |||| |||||||||| ||||||||||||  |||||||||||| ||||    
T  14365580 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgat 14365526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 20570952 - 20571002
Alignment:
Q  137 tgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgac 187  Q
    ||||||||||| ||||||| || |||| |||||||||||||||| ||||||    
T  20570952 tgaagaaagtcacaaaatcttggatttcagaatttaagtcgggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 22687085 - 22687155
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||| || |||||||||  ||| |||||| |||  |||||||||||  |||||||||||||||||    
T  22687085 agcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactacttttgtagaatcgat 22687155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 8329814 - 8329863
Alignment:
Q  35 taaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||| ||||||||||| ||| ||||||||||||  |||||||||||||    
T  8329814 taaaattgcaatcaaaattgaaggattttactcaactacttttgtagaat 8329863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 17809440 - 17809493
Alignment:
Q  131 tgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    |||||||||  |||||| |||||||||||||||| | |||||||||| ||||||    
T  17809440 tgaaggtgagtaaagtcacaaaatcctgaattttgggatttaagtcgcgatttt 17809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 4575027 - 4574971
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| |||||||||||| ||  ||| |||||||  |||||||||||||||||    
T  4575027 tcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgat 4574971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7730191 - 7730239
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgta 80  Q
    ||||||||| |||| |||||||||||| ||||||||||  |||||||||    
T  7730191 tcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgta 7730239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8343634 - 8343686
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||  |||||||||||||||  |||||||||||  |||||||||||||    
T  8343634 tcgtaaaaatgcaatcaaaatcgaagtattttactcaactacttttgtagaat 8343686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8346363 - 8346415
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||| || |||||||||||| || ||||||||||||  |||||||||||||    
T  8346363 tcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaat 8346415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 8e-40; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 5361981 - 5362088
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||| |||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5361981 aatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggat 5362080  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  5362081 tttgacaa 5362088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 8011234 - 8011341
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  8011234 aatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttgagttgggat 8011333  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  8011334 tttgacaa 8011341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 8889339 - 8889233
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||||| || |||||||||| ||||||| ||||||||||||||    
T  8889339 aatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggat 8889240  T
Q  182 tttgaca 188  Q
    |||||||    
T  8889239 tttgaca 8889233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 7044831 - 7044731
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||| || ||||||| |||||||||||||||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  189 a 189  Q
    |    
T  7044731 a 7044731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 13551640 - 13551747
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  |||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||    
T  13551640 aatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttaggatataagtcgagat 13551739  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  13551740 tttgacaa 13551747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 17466190 - 17466083
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||| |||||||||||| |||||||  |||||||| || ||    
T  17466190 aatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaat 17466091  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  17466090 tttgacaa 17466083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 36120935 - 36120828
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| |||||||||||||| | ||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| ||    
T  36120935 aatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaat 36120836  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  36120835 tttgacaa 36120828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 13023660 - 13023571
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaa-ttttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| || |||||| |||||||| |||||||||||||    
T  13023660 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaa 13023571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 24719610 - 24719521
Alignment:
Q  100 attttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||| |||||||  |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaa 24719521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 9770215 - 9770116
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||  |||||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||| |||||| ||||    
T  9770215 gattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaa 9770116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 10143010 - 10142903
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  |||||||| ||| || |||||| ||||||| ||||||||| |||||||||||||||  | |||||||||||||||||||||||    
T  10143010 aatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggat 10142911  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  10142910 tttcacaa 10142903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 5375749 - 5375668
Alignment:
Q  108 attctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| | |||||||||||||| || |||||||||||||    
T  5375749 attctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaa 5375668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 9770426 - 9770353
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||    
T  9770426 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtcttttgtagaatcgat 9770353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 4156866 - 4156767
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||| |||||||| ||  ||||||||||||| |||||||| ||||||  |||||||| |||||||  ||||||||||||||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 7815661 - 7815559
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| ||||||||||||||| ||||| ||||||||| | ||| |||| |||||| |||||| ||| ||||||| ||||||||||||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  189 ata 191  Q
    |||    
T  7815561 ata 7815559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 9911429 - 9911537
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaatttta-gaatttaagtcggga 180  Q
    ||||||||||||||||  ||||| |||||||| |||||||||  | ||||||||||||||||||| |||||||| ||||||||| || ||||| ||||||    
T  9911429 aatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattttaaatcggga 9911528  T
Q  181 ttttgacaa 189  Q
    ||| |||||    
T  9911529 tttagacaa 9911537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 18459733 - 18459833
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| |||||| |||||||  |||||||||||||||||||| ||||| | |||||||||||| || ||||||| |||| |||||||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  189 a 189  Q
    |    
T  18459833 a 18459833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 5375980 - 5375909
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||    
T  5375980 aaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctgtagaatc 5375909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 23064981 - 23065088
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||  | |||||| | ||||||  ||||||||||||||||||| |||||||||||  |||||| ||| |||||||||||||||||||| |    
T  23064981 aatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggt 23065080  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  23065081 tttaacaa 23065088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 55476296 - 55476229
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  55476296 aaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 55476229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 6347115 - 6347192
Alignment:
Q  115 tatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| ||||||| |||||||| || |||||||||||||    
T  6347115 tatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaataa 6347192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 8010951 - 8011024
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  | |||| ||||||||||    
T  8010951 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgat 8011024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 7452523 - 7452424
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| ||| || ||| || | |||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 36121129 - 36121064
Alignment:
Q  23 aatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  36121129 aatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttgtagtatcgat 36121064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8367511 - 8367455
Alignment:
Q  20 caaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttt 76  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  8367511 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttt 8367455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 23064783 - 23064849
Alignment:
Q  22 aaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||| ||||||||||| ||||||||||| ||| ||||||| |||| ||||||||||||||||||    
T  23064783 aaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttgtagaatcgat 23064849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 37240368 - 37240266
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||| ||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||    || |||||||| |||||||| |||||    
T  37240368 aatcgatgaattatgcctattttggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggat 37240274  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  37240273 tttaacaa 37240266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 9911226 - 9911299
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||||||||||||||||||| ||||| |||| |||| |||||||||| |  |||||||||||||||||    
T  9911226 aatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgtagaatcgat 9911299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 13551487 - 13551560
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||  |||||||||||| ||||| ||||||||| |||||||||| | ||||||| ||||||||||    
T  13551487 aatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgat 13551560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 9149762 - 9149858
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgac 187  Q
    |||||| |||| ||||| ||||  |||  |||||| || ||||||||  | |||||||||||||||| |||||||| ||||||||||||||||||||    
T  9149762 attttgtttatgttggggttctgatataaatttgattctttgaaggtagataaagtcgcaaaatcctaaattttaggatttaagtcgggattttgac 9149858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 37240536 - 37240480
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  37240536 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgat 37240480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 13023877 - 13023799
Alignment:
Q  10 aagaaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||| |||||||||||||| |||||||||||  ||||||| || |||||||||||| ||| || ||||||| |||||||    
T  13023877 aagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaatcgat 13023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 6346773 - 6346839
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||||  | |||||||||  |||||||||||||| ||||||||||||  |||||||||||||    
T  6346773 agcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactacttttgtagaat 6346839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 10394907 - 10394853
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcg 86  Q
    ||||||||| ||||||||||||||| || |||||||||  |||||||||||||||    
T  10394907 tcgtaaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcg 10394853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 4157322 - 4157269
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcga 87  Q
    ||||||| |||||||| |||||| ||||||||||||  ||||||||||||||||    
T  4157322 gtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 4157609 - 4157556
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcga 87  Q
    ||||||| |||||||| |||||| ||||||||||||  ||||||||||||||||    
T  4157609 gtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 7045057 - 7045004
Alignment:
Q  35 taaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||| ||||||||||||||||||||||||||||  ||||||| | |||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgat 7045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 5361797 - 5361853
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| |||| |||||||||| | ||||||||||  |||||||||||||||||    
T  5361797 tcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgat 5361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 10143197 - 10143141
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||||||||||||||| ||||||| ||||  | |||||||||||||||    
T  10143197 tcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgat 10143141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 7452802 - 7452750
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||||| ||||||||||||||| || |||||||||  ||||||||||||||    
T  7452802 tcgtaaaatcgcaatcaaaatcgaagga-tttactcaactacttttgtagaatc 7452750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 24719860 - 24719816
Alignment:
Q  44 aatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||    
T  24719860 aatcacaatcgaaggattttactcgattacttttgtagaatcgat 24719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 46664421 - 46664481
Alignment:
Q  128 cgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    |||||||| |||| ||||||||||||| ||||||||||  |||||||| |  |||||||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaattttgaca 46664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 15294781 - 15294674
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  15294781 aatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggat 15294682  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  15294681 ttttacaa 15294674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 15475150 - 15475043
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  15475150 aatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggat 15475051  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  15475050 ttttacaa 15475043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 82 - 192
Target Start/End: Complemental strand, 31424274 - 31424164
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||| ||||||||||||||  |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||||    
T  31424274 aatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggat 31424175  T
Q  182 tttgacaataa 192  Q
    |||||||||||    
T  31424174 tttgacaataa 31424164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 3094271 - 3094379
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||  ||    
T  3094271 aatcgatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaat 3094370  T
Q  182 tttgacaat 190  Q
    |||||||||    
T  3094371 tttgacaat 3094379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 5922160 - 5922053
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  5922160 aatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggat 5922061  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  5922060 tttgacaa 5922053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 17647104 - 17646997
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||    
T  17647104 aatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaat 17647005  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  17647004 tttgacaa 17646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 45403140 - 45403033
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||    
T  45403140 aatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgat 45403041  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  45403040 tttgacaa 45403033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 19704473 - 19704581
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcc-tgaattttagaatttaagtcggga 180  Q
    |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||  |||||||| ||||    
T  19704473 aatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttggga 19704572  T
Q  181 ttttgacaa 189  Q
    |||||||||    
T  19704573 ttttgacaa 19704581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 11879711 - 11879604
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||| | |||||| |||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| | ||    
T  11879711 aatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaat 11879612  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  11879611 tttgacaa 11879604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 11897127 - 11897020
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||| | |||||| |||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| | ||    
T  11897127 aatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaat 11897028  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  11897027 tttgacaa 11897020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 22910220 - 22910319
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||| ||||||  ||||||| ||| |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||    
T  22910220 aatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggat 22910319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 29384334 - 29384441
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    ||||||| ||||||  | ||||    
T  29384334 aatcgatgaattttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggat 29384433  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  29384434 tttgacaa 29384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 45403343 - 45403270
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||    
T  45403343 aatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttgtagaatcgat 45403270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 2040431 - 2040359
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  2040431 tagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaatcgatg 2040359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 7489097 - 7489171
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||  ||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||    
T  7489097 aaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggacttttgtagaatcgat 7489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 19704272 - 19704345
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| |||||||||||| || || ||||||||| |||| |||||||||||||    
T  19704272 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgat 19704345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 7262074 - 7262006
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||||||||||||||||||||| |||||||||||  || |||||||||||| |||||||||||||||    
T  7262074 tagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 477101 - 477172
Alignment:
Q  118 ggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaa 477172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 27836486 - 27836589
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    |||| |||||||||||||| | |||||| ||||||||| ||| |||||||||||| |||  |||||||||||||||||||| || |||||  | ||||||    
T  27836486 gatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttg 27836585  T
Q  186 acaa 189  Q
    ||||    
T  27836586 acaa 27836589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 40541637 - 40541708
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||| ||||| ||||||||||||    
T  40541637 tagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaaggacttctgtagaatcgat 40541708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 15761466 - 15761564
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||| |||||||||||| |  |||| |||||||||||||||||| || ||| || |||||||||| | ||||| |||||||||| |||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaa 15761564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 6810925 - 6810861
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 154  Q
    |||||||| ||||||   |||||| ||||||||||||||||||||||||||||||||||||||||    
T  6810925 gattttgcctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 15294977 - 15294913
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatc 15294913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 15475346 - 15475282
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatc 15475282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 16752335 - 16752263
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||| |||||||||||||| |||| |||||||||| |||||||||||| || ||||||||||| ||||    
T  16752335 tagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtagaattgatg 16752263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 24056594 - 24056690
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttga 186  Q
    |||||||  ||||||||||||    ||||||||||||||||| || ||||| ||||||||||||||||| ||||||| |||||||||  ||||||||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttga 24056690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 27836113 - 27836181
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtaga 82  Q
    ||||||||||||  ||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  27836113 aaatagcaaaattaggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 23136396 - 23136350
Alignment:
Q  146 tcgcaaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  23136396 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaataa 23136350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24414102 - 24414175
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||   |||||||||||| ||||||||||||||| ||||||||||||  | |||||||||||||||    
T  24414102 aatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatttttgtagaatcgat 24414175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 32424641 - 32424576
Alignment:
Q  22 aaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcga 87  Q
    ||||||| ||||||||||| ||||| ||||||||| |||||||||||| || ||||||||||||||    
T  32424641 aaatcggaactcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcga 32424576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 23142286 - 23142224
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaa 144  Q
    |||||||| ||||||| |||||| |||||||| ||||||||| ||||||||||| ||||||||    
T  23142286 aatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 5922362 - 5922289
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||| | ||  ||| ||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  5922362 aatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgat 5922289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 11879914 - 11879841
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||||||| ||||||||||| ||||||||||||||| ||||||||  ||  |||||| ||||||||||    
T  11879914 aatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttatagaatcgat 11879841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 11897330 - 11897257
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||||||| ||||||||||| ||||||||||||||| ||||||||  ||  |||||| ||||||||||    
T  11897330 aatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttatagaatcgat 11897257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 23142488 - 23142415
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||| ||| | ||||||||| |||||  |||||||||||||||| ||||  |||||||||||||||||    
T  23142488 aatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaacttttgtagaatcgat 23142415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 15231829 - 15231733
Alignment:
Q  88 tggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    |||||||||| ||||||  |||| || |||| |||| |||||||||||||||||||  |||||||||| | || ||||| |||||| ||| ||||||    
T  15231829 tggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaatcttaaagtttaggatttaaatcgagatttt 15231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 15761190 - 15761246
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| |||||  |||||||| ||||||||||||| |||||||||||||||||    
T  15761190 tcgtaaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgat 15761246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 6292360 - 6292467
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||| || ||||| |||||||| | ||| || ||||| ||||||||||| ||| |||| |||||| ||||||| | |||||||  ||||||||||| ||    
T  6292360 aatcgttgaatttttcttattttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtat 6292459  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  6292460 tttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 7489331 - 7489412
Alignment:
Q  108 attctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    |||||| || |||||| ||||||||||||||||||||   ||||||| ||| ||||||  |||||| | ||||||||||||||||    
T  7489331 attctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaattggggattttgacaataa 7489412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 17647308 - 17647238
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||  | || |||||| ||||||||||||||| ||||||||||||  | |||||||||||||||    
T  17647308 agcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactcaactagttttgtagaatcgat 17647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 29384122 - 29384196
Alignment:
Q  10 aagaaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||| || |||||||  | ||||||||| |||| |||||||||| ||||||||||||  |||||||||||||    
T  29384122 aagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaat 29384196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 2040354 - 2040315
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  2040354 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 2040315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 17566395 - 17566344
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaa 83  Q
    ||||||||| |||||||||||||||  |||||||||||  ||||||||||||    
T  17566395 tcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaa 17566344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 15231932 - 15231862
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||  | ||||||||| ||||  ||||||| | ||||||||||||  |||||||||||||||||    
T  15231932 agcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgat 15231862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 24056405 - 24056455
Alignment:
Q  35 taaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||||| ||||||||||||| ||||||||||||  | ||||||||||||    
T  24056405 taaaatggtaatcaaaatcgaaggattttactcaactagttttgtagaatc 24056455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 30240697 - 30240751
Alignment:
Q  132 gaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttga 186  Q
    ||||||||| ||||||| ||||||||  |||||||||||||| ||| ||||||||    
T  30240697 gaaggtgaataaagtcgaaaaatcctatattttagaatttaaatcgcgattttga 30240751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 1018318 - 1018371
Alignment:
Q  120 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaa 173  Q
    |||||| ||||||||| |||| |||||||||| ||||| | |||||||||||||    
T  1018318 atttgaatcgttgaagatgaaaaaagtcgcaatatcctaagttttagaatttaa 1018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 9036757 - 9036798
Alignment:
Q  148 gcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||||||| ||||||||| || |||||||||    
T  9036757 gcaaaatcctgaattttaggatttaagtcaggtttttgacaa 9036798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 40541714 - 40541751
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatc 53  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  40541714 atagcaaagtcgggactcgtaaaatcgcaatcaaaatc 40541751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 43234979 - 43234872
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||| | |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  43234979 aatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggat 43234880  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  43234879 tttgacaa 43234872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 19579053 - 19578946
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||  |||||||| || ||    
T  19579053 aatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaat 19578954  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  19578953 tttgacaa 19578946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 23172451 - 23172557
Alignment:
Q  83 atcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatt 182  Q
    ||||||| ||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  23172451 atcgatgaattttgtctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggatt 23172550  T
Q  183 ttgacaa 189  Q
    |||||||    
T  23172551 ttgacaa 23172557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 18051548 - 18051655
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||| | |||||| ||| ||||||||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||    
T  18051548 aatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggat 18051647  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  18051648 tttgacaa 18051655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 18843826 - 18843719
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  18843826 aatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaat 18843727  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  18843726 tttaacaa 18843719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 20923829 - 20923722
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||| ||||| |||||| |||||||| |||||||||  ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  20923829 aatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttaggatttaagtcgggat 20923730  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  20923729 tttgacaa 20923722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 22645741 - 22645844
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    |||||| ||| |||||||||||||| || ||||||||| | |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  22645741 gatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttg 22645840  T
Q  186 acaa 189  Q
    ||||    
T  22645841 acaa 22645844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 21059174 - 21059280
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||| |||||||    
T  21059174 aatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggat 21059272  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  21059273 tttgacaa 21059280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 27340204 - 27340307
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||||  ||||||| ||| ||||||||||||||||| ||||||||||||||||||| | |||||||  ||||||||||||||    
T  27340204 aatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggat 27340303  T
Q  182 tttg 185  Q
    ||||    
T  27340304 tttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 38158272 - 38158379
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| ||||||||||  ||||||||||||||| | ||||||||||| |||||| || |||||||||||||||||||  ||||||| ||||||||||| ||    
T  38158272 aatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaat 38158371  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  38158372 tttgacaa 38158379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 15051914 - 15051981
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  15051914 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 41427731 - 41427660
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||    
T  41427731 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggacttttgtagaatcgat 41427660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 19042444 - 19042514
Alignment:
Q  119 gatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaa 19042514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 18844029 - 18843959
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||||||||||||||||||||||| ||||||||||||| |  ||||||||||| |||||||||||||||    
T  18844029 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggacttttgtagaatc 18843959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 41688481 - 41688554
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||| |||||| |||| |||||||||| ||||||||| || ||||||||||||||||||    
T  41688481 aatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggacttttgtagaatcgat 41688554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 19377917 - 19377844
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||| || ||||||| |  |||||||||||||| |||||||||||| ||||||||||||||||||    
T  19377917 aatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 19377844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 43235182 - 43235109
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||| | |||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  43235182 aatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgat 43235109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 19579254 - 19579186
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcg 86  Q
    |||||||| ||||||| |||||| ||||||||||||||| ||||| |||||| ||||||||||||||||    
T  19579254 agcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgtagaatcg 19579186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 24106714 - 24106642
Alignment:
Q  120 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||  |||||| || |||||||||||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggattttgacaataa 24106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 41688683 - 41688782
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| |||||||||||||| | ||| || |||  |||| |||||||||||||||||||| | ||||||||| ||||||||| |||||||| |||||    
T  41688683 aatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-gaattttaggatttaagttgggat 41688781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 19042242 - 19042316
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||| ||||||||||||||  |||| |||||||||  |||||||| || ||||||||||||||||||    
T  19042242 aaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgtagaatcgat 19042316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 20321257 - 20321187
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||| ||||||||| || |||||||||||||||    
T  20321257 aatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggacttttgtagaatc 20321187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 22645542 - 22645602
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgactt 75  Q
    ||||||||||| | |||||||||||| ||||||||||||||| |||||||||||| |||||    
T  22645542 aatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaaagactt 22645602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 20320990 - 20320928
Alignment:
Q  127 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||||||||||||| |||||||| | |||||||| ||||| || |||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaa 20320928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 27340002 - 27340071
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||||||||||  | |||| |||| ||||||||||||||| |||||||||||  ||||||||||||||    
T  27340002 aatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggacttttgtagaat 27340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 19979710 - 19979648
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaa 144  Q
    |||| ||||||||||| | |||||||||||||  ||| |||||||||||||||| ||||||||    
T  19979710 aatccatggattttgcgtgttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 22984643 - 22984689
Alignment:
Q  42 gcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||    
T  22984643 gcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgat 22984689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 18051348 - 18051421
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||||||||||| ||| ||| |||||||||||| ||  |||||| | || ||||||||||||||||||    
T  18051348 aatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggacttttgtagaatcgat 18051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 23172272 - 23172316
Alignment:
Q  44 aatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||    
T  23172272 aatcaaaatcgaagaattttactcaaagacttttgtagaatcgat 23172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 43005693 - 43005747
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||| ||||||||||| ||| ||||||||||||   ||||||||||||||||    
T  43005693 gtaaaatcgcaatcaaaattgaaagattttactcaacttcttttgtagaatcgat 43005747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 24648306 - 24648253
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    ||||||||| | |||||||||| || ||||||||||||  ||||||||||||||    
T  24648306 tcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatc 24648253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 6852381 - 6852417
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaa 51  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  6852381 aatagcaaaatcgggactcataaaattgcaatcaaaa 6852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 9955053 - 9955160
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  9955053 aatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggat 9955152  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  9955153 tttgacaa 9955160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 23528767 - 23528660
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||| |||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||    
T  23528767 aatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggat 23528668  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  23528667 tttgacaa 23528660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 42180083 - 42180190
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| |||||||  |||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  42180083 aatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggat 42180182  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  42180183 tttgacaa 42180190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 82 - 192
Target Start/End: Complemental strand, 13100302 - 13100192
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||| |||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||| |||||    
T  13100302 aatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggat 13100203  T
Q  182 tttgacaataa 192  Q
    |||||||||||    
T  13100202 tttgacaataa 13100192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 19009964 - 19010071
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||||||||| | ||| || ||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  19009964 aatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggat 19010063  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  19010064 tttgacaa 19010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 21846286 - 21846393
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||   ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||    
T  21846286 aatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggat 21846385  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  21846386 tttgacaa 21846393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 41032688 - 41032795
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||| |||    
T  41032688 aatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctgaattctacgatttaagtcgagat 41032787  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  41032788 tttgacaa 41032795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 25146803 - 25146893
Alignment:
Q  99 tattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  25146803 tattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaa 25146893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 12513392 - 12513285
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||| |||||||  |||| || ||||||||||||||||||||| |||||||||||||||||||||  ||| ||| ||||||||||||||    
T  12513392 aatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggat 12513293  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  12513292 tttgacaa 12513285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 9327233 - 9327340
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  |||||||||||| || ||| |||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||| ||||    
T  9327233 aatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggat 9327332  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  9327333 tttaacaa 9327340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 9352081 - 9352188
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||| ||||||||  |||||||||| |||  ||| |||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  9352081 aatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggat 9352180  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  9352181 tttgacaa 9352188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 13276284 - 13276391
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||| |||||||| |||||| |||||||| |||||||||  |||||||||| |||||||||||||||||||||  ||||||| |||||| |||||||    
T  13276284 aatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggat 13276383  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  13276384 tttgacaa 13276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 18304832 - 18304936
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgtt-gaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    |||||||||||  ||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||    
T  18304832 gatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggatttt 18304931  T
Q  185 gacaa 189  Q
    |||||    
T  18304932 gacaa 18304936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 30619150 - 30619079
Alignment:
Q  118 ggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaa 30619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 21846089 - 21846162
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  21846089 aatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 21846162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 18337547 - 18337646
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||| ||||||||| ||||  |||||||||||||||||||||||||| ||||| ||||||||||| |||||||  | ||||||||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttag-gtataagtcgggattttgaca 18337645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 16125473 - 16125586
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaa---gaaagtcgcaaaatcctgaattttagaatttaagtcgg 178  Q
    |||| ||||||||||| ||||||  |||| || |||||||||  |||||||||||||||   |||||||||||||||||||||||||| ||||||||| |    
T  16125473 aatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaagtcag 16125572  T
Q  179 gattttgacaataa 192  Q
    |||||||| |||||    
T  16125573 gattttgaaaataa 16125586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 17056017 - 17056122
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||| ||||||||   |||||| ||||||| |||||||||||||||| ||||| | ||||||||||| ||||||| |||||| || ||||    
T  17056017 aatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctggattttaggatttaaatcaggat 17056116  T
Q  182 tttgac 187  Q
    ||||||    
T  17056117 tttgac 17056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 23528961 - 23528897
Alignment:
Q  24 atcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  23528961 atcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 23528897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 17055740 - 17055807
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  17055740 aaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgat 17055807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 14074413 - 14074495
Alignment:
Q  107 gattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||| | ||||||||||||||||||  |||||||||||||||||||||  ||||||| ||||||| ||||||||||||||    
T  14074413 gattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaa 14074495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 16125270 - 16125343
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  16125270 aatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgat 16125343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 19009763 - 19009836
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||  ||||||||| |||||||    
T  19009763 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgat 19009836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 27917477 - 27917577
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||||||||| ||| ||||||  |||| ||||| || ||||||||| || ||| ||||||||||||  |||| ||||||||||||||||||||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgaca 27917576  T
Q  189 a 189  Q
    |    
T  27917577 a 27917577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 12800623 - 12800706
Alignment:
Q  106 ggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||| || ||| |||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| |||||||| ||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaa 12800706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 9351878 - 9351948
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||||||||||||||||||||||| ||||||||||||| | |||||||  ||| |||||||||||||||    
T  9351878 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggacttttgtagaatc 9351948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 13100500 - 13100431
Alignment:
Q  19 gcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||| ||||||||||| |||||||||||| || |||||||||||| ||| ||||||||||||||    
T  13100500 gcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggacatttgtagaatcgat 13100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 14074298 - 14074371
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||| || |||| ||||||  |||||||||||||| |||||||||||| ||||||||||||||||||    
T  14074298 aatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 14074371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 25146583 - 25146656
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||| | ||||||||| ||||||||||||||| |||||||||||| | |||| |||||||||||    
T  25146583 aatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtctttcgtagaatcgat 25146656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 17197346 - 17197414
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||||||||| ||||||||||| ||||  ||||||||| |||||||||||| |||||||||||||||    
T  17197346 tagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttttgtagaatc 17197414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 24117111 - 24117011
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    |||||||| || ||||||||||||| |||  |||||| |||||||||||||| ||||| | |||||| | ||||||||||||||| | || |||||||||    
T  24117111 ggattttgtttgttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgaca 24117012  T
Q  189 a 189  Q
    |    
T  24117011 a 24117011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 9128858 - 9128965
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||  ||||||  ||||||| |||  |||||||||||| || |||||||||||||||| ||||| | |||||| |||||||||| |||    
T  9128858 aatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgat 9128957  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  9128958 tttaacaa 9128965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 17869568 - 17869635
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatc 85  Q
    |||||||||||||| |||||||| |||||||||||| || |||||||||||| ||||||| |||||||    
T  17869568 agcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggacttttatagaatc 17869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 9954848 - 9954898
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttac 65  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  9954848 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 9954898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 9128653 - 9128726
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||||||||||||||||  | |||||||||||| ||||||||| || || |||||||| ||||||    
T  9128653 aatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgtaggatcgat 9128726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 17869768 - 17869875
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||| | ||||||| |||||| |||||||| | |||||||  ||||| |||||||||||||||||||||||||     ||||  ||||||||| ||||    
T  17869768 aatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc-----tttaagatttaagtcaggat 17869862  T
Q  182 tttgacaataagt 194  Q
    |||||||| ||||    
T  17869863 tttgacaacaagt 17869875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 9321548 - 9321599
Alignment:
Q  13 aaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgatttta 64  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  9321548 aaaatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggatttta 9321599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 34478833 - 34478895
Alignment:
Q  127 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||||||||| ||||||||  |||||||  ||||||||||||||||| ||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaa 34478895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 16434823 - 16434754
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| |  |||||||||||||    
T  16434823 aatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttgtagaat 16434754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 18304643 - 18304699
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||| ||||||||||| ||||||||| || ||||||||||||||||||    
T  18304643 tcgtaaaatcgcattcaaaatcgaaggattttactaaaggacttttgtagaatcgat 18304699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 42179886 - 42179953
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtaga 82  Q
    ||||||| |||||  ||||||||||| ||||||||||||||| ||||||| || | ||||||||||||    
T  42179886 aatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggacttttgtaga 42179953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 8772809 - 8772715
Alignment:
Q  89 ggattttg-cttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatt 182  Q
    |||||||| ||| |||||||| |||  ||||||||||||| ||||||| |  | ||||||||||||| ||| ||||| | |||||||||||||||    
T  8772809 ggattttgtctttttttgggactctgctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgggatt 8772715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 12002752 - 12002790
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatc 53  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  12002752 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 12002790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 27502170 - 27502224
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaa 69  Q
    |||||||||| || ||||| |||||| ||||||||||||||| ||||||||||||    
T  27502170 aatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttactcaa 27502224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 12002678 - 12002747
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| |||||||  |||||  |||| ||||||||| |||||||||||  ||||||||||||||||||    
T  12002678 tagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttttgtagaatcgat 12002747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 12003241 - 12003288
Alignment:
Q  142 aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||| ||||| ||||||||||| || ||||||||||||||||||||    
T  12003241 aaagtcacaaaaacctgaattttaaaacttaagtcgggattttgacaa 12003288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 47786169 - 47786103
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||||  | |||||||||  ||| |||||||||| ||||||||||||  |||||||||||||    
T  47786169 agcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaat 47786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 47785837 - 47785796
Alignment:
Q  148 gcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||||||||| ||||| || |||||||||||||    
T  47785837 gcaaaatcctgaattttaggatttatgttgggattttgacaa 47785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 27502239 - 27502323
Alignment:
Q  101 ttttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    ||||||||||||  ||||||||||||||||||||| | || |||||  |||||  ||| ||||| ||| ||||| || |||||||    
T  27502239 ttttgggattctgctatggatttgagtcgttgaagttaaacaaagttacaaaaatctggattttggaacttaagccgcgattttg 27502323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 30619223 - 30619183
Alignment:
Q  48 aaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  30619223 aaaatcgaaggattttactcaactacttttgtagaatcgat 30619183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 1404894 - 1404787
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| || ||| ||||||||  |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  1404894 aatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggat 1404795  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  1404794 tttgacaa 1404787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 23863339 - 23863446
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  23863339 aatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattttagaatttaagtcgggat 23863438  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  23863439 tttgacaa 23863446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 30432530 - 30432423
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||||| || ||||    
T  30432530 aatcgatggattttgtctattttgagattctactatggatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggat 30432431  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  30432430 tttgacaa 30432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 31237995 - 31238102
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||| | ||||||  ||||||| |||| ||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||    
T  31237995 aatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggat 31238094  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  31238095 tttgacaa 31238102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 35565972 - 35566079
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| |||||||||||||||  ||||||||||||| |||||  ||||||||||||||||||||||||||||   |||||||| |||||    
T  35565972 aatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggat 35566071  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  35566072 tttgacaa 35566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 25539244 - 25539351
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||||||||| | ||||| || |||||||||| |||||| |||||||    
T  25539244 aatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttaggatttaaatcgggat 25539343  T
Q  182 tttgacaa 189  Q
    ||| ||||    
T  25539344 tttaacaa 25539351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 36429959 - 36429852
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||||||||||| ||||||| ||||||  |||| | ||||||||||||||||||||||||||||||||||||  ||| ||| |||||||| |||||    
T  36429959 aatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggat 36429860  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  36429859 tttgacaa 36429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 19262131 - 19262204
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  19262131 aatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgat 19262204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 7302094 - 7302022
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  7302094 tagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatg 7302022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 27523913 - 27523985
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  27523913 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatg 27523985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 31578111 - 31578009
Alignment:
Q  86 gatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttg 185  Q
    ||||||||||||||||||| |||||||| || |||||| | |||||||||||||||||| |||||||||| | |||||||  ||||||||||||||||||    
T  31578111 gatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttg 31578013  T
Q  186 acaa 189  Q
    ||||    
T  31578012 acaa 31578009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 15588871 - 15588973
Alignment:
Q  85 cgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatttt 184  Q
    |||| |||||||  ||||||| ||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||    
T  15588871 cgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaatttta-agattaagtcgggatttt 15588969  T
Q  185 gaca 188  Q
    ||||    
T  15588970 gaca 15588973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 20063825 - 20063718
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||| ||||||||  ||||||| | || |||||||  |||||||||||||    
T  20063825 aatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggat 20063726  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  20063725 tttgacaa 20063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 1690785 - 1690887
Alignment:
Q  87 atggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttga 186  Q
    |||| |||||| |||||||||||| || ||||||| |||||||| |||||||||||||||| ||||||||| |||||||  |||||||||||  ||||||    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  187 caa 189  Q
    |||    
T  1690885 caa 1690887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 20064037 - 20063964
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||| |||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||    
T  20064037 aatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgat 20063964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 30433129 - 30433056
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  30433129 aatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggacttttatagaatcgat 30433056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 20034039 - 20034111
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  20034039 tagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtagaatcgatg 20034111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 1405097 - 1405024
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  1405097 aatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgat 1405024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 21869136 - 21869209
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  21869136 aatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgacttttgtagaatcgat 21869209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 31237791 - 31237864
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||| |||||||    
T  31237791 aatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttgtaaaatcgat 31237864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 974651 - 974579
Alignment:
Q  17 tagcaaaatcggga-ctcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||| | |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  974651 tagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 974579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 34578201 - 34578129
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||||||||| |||||| ||||||||||| ||| |||||||||||  |||||||||||||||||||    
T  34578201 tagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgatg 34578129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 19491967 - 19491859
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattt--tagaatttaagtcggg 179  Q
    |||||||||||||| | |||||||| |||||  ||||||||||||||||| ||| |||||||||||||||||||||  ||||  ||| |||||| ||| |    
T  19491967 aatcgatggattttacctattttgg-attctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttataggatttaattcgag 19491869  T
Q  180 attttgacaa 189  Q
    ||||||||||    
T  19491868 attttgacaa 19491859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 16766809 - 16766714
Alignment:
Q  94 ttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||| |||||||  ||||||||||| |||||||||||||| ||| ||| |||||||| |||||||  |||||||||   ||||||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaa 16766714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 34841659 - 34841584
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaatttta 165  Q
    |||||||| | |||||| |||||  |||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  34841659 gattttgcatgttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaatttta 34841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 36430156 - 36430089
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| |||||||||||||| ||||||||||||||| ||| ||||||||| | |||||||||||||||    
T  36430156 aaaattgggactcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgat 36430089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 19245231 - 19245157
Alignment:
Q  115 tatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||| ||| | ||| |||  ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  19245231 tatggatttgaatcgctaaagatgagtaaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaa 19245157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 31023325 - 31023259
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcct 157  Q
    ||||||| |||||| |||||||| |||| ||||||||||||||| ||||| ||||||||||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 15266187 - 15266086
Alignment:
Q  88 tggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgac 187  Q
    |||||||| | |||||||| ||| ||  |||||||||| || |||||| |||| |||||  |||||||||||||||||| |||||| ||  |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  188 aa 189  Q
    ||    
T  15266087 aa 15266086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 25538960 - 25539033
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||| ||||||||| |||||||||| |||||||||||  || ||||||||| ||  |||||||||||||||||    
T  25538960 aatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttgtagaatcgat 25539033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 27406851 - 27406782
Alignment:
Q  121 tttgagtcgttgaaggtgaagaaagtcgcaaaatcct-ga-attttagaatttaagtcgggattttgaca 188  Q
    ||||||||||||||||| || ||| |||||||||||| || |||||||||||||| ||||||||||||||    
T  27406851 tttgagtcgttgaaggtaaaaaaaatcgcaaaatcctagagattttagaatttaattcgggattttgaca 27406782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 5395674 - 5395741
Alignment:
Q  90 gattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcct 157  Q
    |||||||| ||||||| ||||||  |||||||||||||| || ||| |||| ||||||||||||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcct 5395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 27750194 - 27750277
Alignment:
Q  106 ggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||| |||||||||||||||||| ||| | |  |||||||||||||| || ||||| | | |||||||| |||||||||||    
T  27750194 ggattctgttatggatttgagtcgtttaagttaagaaaagtcgcaaaatcttgtattttgggacttaagtcgcgattttgacaa 27750277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 34578124 - 34578085
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatcga 34578085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 17995157 - 17995059
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||| |||||||| ||| |  || | |||||||||||||| |||||| ||| ||||||||| ||| |||||||  |||||||||| ||||| ||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaa 17995059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 19245903 - 19245830
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||   | ||||||||| |||||||||||| || ||||||||| ||  |||||||||||||||||    
T  19245903 aatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactacttttgtagaatcgat 19245830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 20034115 - 20034155
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  20034115 aatagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 20034155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 13503067 - 13503162
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcct-gaattttagaatttaagtcgggattt 183  Q
    ||||||||| |||||| | ||| | ||||||||||||| ||||||| ||||| ||  |||||||||||| || |||||  |||||||||| |||||    
T  13503067 ggattttgcctattttagaattttgttatggatttgagccgttgaaagtgaataagatcgcaaaatcctagatttttaagatttaagtcgagattt 13503162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 15516609 - 15516684
Alignment:
Q  114 ttatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||| |||||| | |||||||||||| ||||||||||||| |||||| |||  |||||||| | |||||| ||||    
T  15516609 ttatgaatttgaattgttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaa 15516684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 15627699 - 15627656
Alignment:
Q  149 caaaatcctgaattttagaatttaagtcgggattttgacaataa 192  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  15627699 caaaatcataaattttaggatttaagtcgggattttgacaataa 15627656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 27523990 - 27524029
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  27523990 atagcaaagtcgggactcgtaaaattgcaatcaaaatcga 27524029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 27749341 - 27749396
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcga 87  Q
    ||||||||| |||||| |||| |||||| ||||||||| || ||||||||||||||    
T  27749341 tcgtaaaatcgcaatctaaattgaatgagtttactcaaggatttttgtagaatcga 27749396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 34167603 - 34167541
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaa-atcgaatgattttactcaatgacttt 76  Q
    |||||||||||||  | ||||||||| |||||| || |||||||||||||||||||| |||||    
T  34167603 aatagcaaaatcgaaaatcgtaaaatcgcaatctaacatcgaatgattttactcaattacttt 34167541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 16767079 - 16767026
Alignment:
Q  35 taaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||| ||||||||||| ||| ||||||||||||  |||||| ||||||||||    
T  16767079 taaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgat 16767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 15628039 - 15627991
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtaga 82  Q
    ||||||||| ||||||||||||| | ||||||||||  |||||||||||    
T  15628039 gtaaaatggaaatcaaaatcgaaggtttttactcaactacttttgtaga 15627991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 8554 - 8447
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||| |||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||    
T  8554 aatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggat 8455  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  8454 tttgacaa 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8755 - 8682
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||||||  | ||| |||||||||||    
T  8755 aataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtagaatcgat 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 7473 - 7573
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    |||||||| ||||||| |||||| |||||||| |||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7473 aatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 7572  T
Q  182 t 182  Q
    |    
T  7573 t 7573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 7270 - 7339
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||||||| |||| ||||||| | ||||||||||||| ||||||||||||  |||||||| ||||    
T  7270 aatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaat 7339  T

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Target: scaffold0510 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 118 - 218
Alignment:
Q  82 aatcgatggatttt-gcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcggga 180  Q
    |||||||||||||| || |||||| | ||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  118 aatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcggga 217  T
Q  181 t 181  Q
    |    
T  218 t 218  T

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Target: scaffold0079 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 14743 - 14815
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  14743 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtagaatcgatg 14815  T

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Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 14820 - 14859
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  14820 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 14859  T

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Target: scaffold0048 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 48816 - 48913
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  ||||||| ||||||||||| ||||| ||||    
T  48816 attttgctt-ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaa 48913  T

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Target: scaffold0048; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 61410 - 61472
Alignment:
Q  91 attttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaa 153  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||| ||| ||||||||||||    
T  61410 attttgcttattttgggattctcatatggatttgaaccgttgaaggcgaataaagtcgcaaaa 61472  T

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Target: scaffold0048; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 48505 - 48550
Alignment:
Q  43 caatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||||||| ||||||||| ||  |||||||||||||||||    
T  48505 caatcaaaatcgaaggattttacttaactacttttgtagaatcgat 48550  T

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Target: scaffold0048; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 61146 - 61202
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    |||||||||  ||||||||||||||  |||||||| ||  |||||||||||||||||    
T  61146 tcgtaaaatcacaatcaaaatcgaagaattttacttaactacttttgtagaatcgat 61202  T

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Target: scaffold0042 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 93724 - 93829
Alignment:
Q  82 aatcgatggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggat 181  Q
    ||||||||||||| || |||||| | |||||  ||||||||||||| ||||| |||||||||| |  |||||| ||| ||||||| ||||||||||||||    
T  93724 aatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggat 93821  T
Q  182 tttgacaa 189  Q
    ||||||||    
T  93822 tttgacaa 93829  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 93539 - 93593
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||| | ||||||||||||| ||||||| ||||  |||||||||||||||||    
T  93539 gtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgat 93593  T

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Target: scaffold0036 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 37191 - 37291
Alignment:
Q  89 ggattttgcttattttgggattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgaca 188  Q
    ||||||| | ||||||  ||||||  ||||||||||||| |||||||||||| ||| | ||||||| |||||||||| |||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  189 a 189  Q
    |    
T  37291 a 37291  T

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Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 38341 - 38415
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||||||||||||||||||| |||||| | |||||| |||||||||||  |||||||||||||||||||    
T  38341 aaatagcaaaatcgggactcgtaaaattgcaatc-agatcgaaggattttactcatggacttttgtagaatcgatg 38415  T

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Target: scaffold0027 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 132943 - 133004
Alignment:
Q  28 ggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  132943 ggactcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgatg 133004  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 133009 - 133046
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatc 53  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  133009 atagcaaagtcgggactcgtaaaatcgcaatcaaaatc 133046  T

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Target: scaffold0016 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 56240 - 56313
Alignment:
Q  15 aatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||||| |||   |||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  56240 aatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 56313  T

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Target: scaffold0061 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 76123 - 76197
Alignment:
Q  14 aaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    ||||||||||  ||||||||||||||| ||||| || |||||| |||||||||||| |||||||||||||||||||    
T  76123 aaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaagacttttgtagaatcgatg 76197  T

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Target: scaffold0603 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 9071 - 9145
Alignment:
Q  115 tatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||||||||||||||||||| ||| || |||||||||  |||||| ||||||| || ||||||||||||    
T  9071 tatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaa 9145  T

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Target: scaffold0603; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 8777 - 8843
Alignment:
Q  18 agcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||||||||  | || |||||| | ||||||||||||| ||||||||||||  |||||||||||||    
T  8777 agcaaaatcgaaaatcataaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaat 8843  T

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Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 145907 - 145829
Alignment:
Q  10 aagaaaatagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||||||  ||||||  | ||||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||    
T  145907 aagaaaatagttaaatcgaaaatcgtaaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgat 145829  T

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Target: scaffold0115 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 35115 - 35184
Alignment:
Q  120 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    |||||||||||| |||||||| |||||  ||||||  ||||||||||||||||||||| |||||||||||    
T  35115 atttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaa 35184  T

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Target: scaffold0182 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24698 - 24626
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatg 89  Q
    |||||||||||||||||||||||| | |||||||||| || ||||||||||||    ||||||||||||||||    
T  24698 tagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaaatttttttgtagaatcgatg 24626  T

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Target: scaffold2084 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 140 - 81
Alignment:
Q  17 tagcaaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttt 76  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||||||||| ||||||    
T  140 tagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaaggacttt 81  T

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Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 33233 - 33179
Alignment:
Q  34 gtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaatcgat 88  Q
    ||||||| |||||||||||||||  |||||||||| | |||||||||||||||||    
T  33233 gtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgat 33179  T

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Target: scaffold0163 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 2465 - 2392
Alignment:
Q  116 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaa 189  Q
    ||||||||||||| |||||| | || |||||||||| ||||| |||||| ||| |||||||| |||| ||||||    
T  2465 atggatttgagtcattgaagctaaataaagtcgcaagatcctaaattttggaacttaagtcgtgattctgacaa 2392  T

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Target: scaffold0534 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 967 - 916
Alignment:
Q  32 tcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaa 83  Q
    ||||||||| |||||||||||||||  |||||||||||  ||||||||||||    
T  967 tcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaa 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 8391 - 8352
Alignment:
Q  16 atagcaaaatcgggactcgtaaaatggcaatcaaaatcga 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  8391 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 8352  T

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Target: scaffold0526; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 8464 - 8401
Alignment:
Q  21 aaaatcgggactcgtaaaatggcaatcaaaatcgaatgattttactcaatgacttttgtagaat 84  Q
    ||||| ||||||| |||||| ||| ||||||||||| |||||||||||| || || ||||||||    
T  8464 aaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaaggagttgtgtagaat 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 5653 - 5719
Alignment:
Q  116 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggatt 182  Q
    ||||||||||||| |||||| | |  |||||||||| |||||||||||| ||| |||||||| ||||    
T  5653 atggatttgagtcattgaagctaagtaaagtcgcaagatcctgaattttggaacttaagtcgtgatt 5719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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