View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19973_low_26 (Length: 383)

Name: NF19973_low_26
Description: NF19973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19973_low_26
NF19973_low_26
[»] chr1 (48 HSPs)
chr1 (5-365)||(3100145-3100501)
chr1 (1-64)||(40610228-40610291)
chr1 (1-63)||(20288348-20288411)
chr1 (5-64)||(51703465-51703524)
chr1 (1-70)||(25130696-25130765)
chr1 (1-66)||(34941929-34941994)
chr1 (1-65)||(30530583-30530647)
chr1 (1-69)||(50775165-50775234)
chr1 (1-65)||(51193140-51193204)
chr1 (1-64)||(1790507-1790571)
chr1 (1-64)||(11097893-11097956)
chr1 (1-64)||(30535990-30536054)
chr1 (5-64)||(8828135-8828193)
chr1 (1-64)||(12657221-12657284)
chr1 (1-63)||(16986938-16987001)
chr1 (1-63)||(25995460-25995522)
chr1 (3-69)||(32938853-32938919)
chr1 (1-64)||(33100807-33100870)
chr1 (3-66)||(45333567-45333630)
chr1 (2-64)||(50226889-50226951)
chr1 (1-62)||(3558847-3558909)
chr1 (1-66)||(20565126-20565192)
chr1 (1-63)||(27465066-27465128)
chr1 (1-66)||(31427966-31428031)
chr1 (1-62)||(33054096-33054158)
chr1 (1-66)||(36690581-36690646)
chr1 (1-66)||(36706682-36706747)
chr1 (1-63)||(48871964-48872025)
chr1 (1-65)||(8411726-8411791)
chr1 (1-65)||(44641912-44641976)
chr1 (1-64)||(48872960-48873022)
chr1 (1-64)||(366656-366719)
chr1 (1-64)||(7078509-7078572)
chr1 (1-64)||(10890054-10890118)
chr1 (1-64)||(11812386-11812449)
chr1 (1-64)||(15705070-15705134)
chr1 (5-64)||(26547233-26547292)
chr1 (1-64)||(27352629-27352692)
chr1 (1-45)||(27895769-27895812)
chr1 (1-64)||(30439249-30439312)
chr1 (1-64)||(36669379-36669442)
chr1 (1-29)||(43056750-43056778)
chr1 (1-64)||(44112453-44112516)
chr1 (1-29)||(47113308-47113336)
chr1 (1-64)||(49596234-49596297)
chr1 (1-64)||(50328149-50328213)
chr1 (1-64)||(51286375-51286439)
chr1 (1-64)||(52362481-52362545)
[»] chr7 (26 HSPs)
chr7 (1-66)||(12102718-12102783)
chr7 (1-69)||(19426574-19426642)
chr7 (1-64)||(155990-156054)
chr7 (24-64)||(42194916-42194956)
chr7 (1-64)||(32933547-32933609)
chr7 (1-63)||(37149498-37149561)
chr7 (3-65)||(37899223-37899286)
chr7 (1-63)||(40842405-40842467)
chr7 (1-67)||(43079641-43079707)
chr7 (1-65)||(33180718-33180783)
chr7 (1-65)||(13152591-13152655)
chr7 (1-64)||(32918989-32919052)
chr7 (1-64)||(46829478-46829542)
chr7 (1-68)||(5198766-5198832)
chr7 (1-63)||(34978296-34978359)
chr7 (1-62)||(2790178-2790239)
chr7 (1-63)||(31844613-31844675)
chr7 (3-69)||(36920798-36920863)
chr7 (1-65)||(27164846-27164910)
chr7 (1-65)||(35452581-35452646)
chr7 (1-65)||(37899321-37899386)
chr7 (1-65)||(44495105-44495170)
chr7 (1-64)||(16980296-16980360)
chr7 (1-64)||(30864426-30864489)
chr7 (1-64)||(38023433-38023496)
chr7 (1-64)||(41966331-41966394)
[»] chr6 (22 HSPs)
chr6 (1-64)||(17417244-17417307)
chr6 (1-66)||(18141309-18141375)
chr6 (1-65)||(3198958-3199023)
chr6 (1-65)||(30906672-30906736)
chr6 (1-64)||(2242030-2242094)
chr6 (1-64)||(15722512-15722575)
chr6 (1-63)||(2689072-2689135)
chr6 (1-63)||(6531191-6531254)
chr6 (3-65)||(9954546-9954608)
chr6 (1-60)||(16533269-16533327)
chr6 (1-58)||(13143390-13143448)
chr6 (1-66)||(30152538-30152604)
chr6 (1-65)||(20822876-20822941)
chr6 (1-66)||(23653902-23653966)
chr6 (1-64)||(3339508-3339571)
chr6 (1-64)||(5327600-5327664)
chr6 (5-64)||(11785354-11785413)
chr6 (1-64)||(16337079-16337142)
chr6 (1-64)||(24842367-24842431)
chr6 (1-64)||(28965849-28965912)
chr6 (1-64)||(29383556-29383619)
chr6 (1-64)||(30796084-30796147)
[»] chr5 (37 HSPs)
chr5 (1-63)||(12661956-12662018)
chr5 (1-63)||(33243748-33243810)
chr5 (1-64)||(19839994-19840058)
chr5 (1-66)||(8920075-8920141)
chr5 (1-65)||(8267828-8267893)
chr5 (1-64)||(20591483-20591546)
chr5 (1-64)||(26660420-26660483)
chr5 (1-64)||(26932012-26932075)
chr5 (1-64)||(38500942-38501005)
chr5 (1-63)||(3109595-3109658)
chr5 (1-63)||(21064234-21064297)
chr5 (1-63)||(34381012-34381074)
chr5 (1-63)||(39595272-39595334)
chr5 (1-63)||(39788715-39788777)
chr5 (1-62)||(41173253-41173315)
chr5 (1-65)||(4954464-4954528)
chr5 (1-64)||(6964375-6964442)
chr5 (1-65)||(9594476-9594540)
chr5 (3-64)||(14073051-14073111)
chr5 (1-65)||(18695316-18695381)
chr5 (1-65)||(36713187-36713251)
chr5 (1-64)||(1774292-1774355)
chr5 (1-60)||(3141498-3141557)
chr5 (1-64)||(5042247-5042311)
chr5 (1-60)||(6241624-6241684)
chr5 (1-64)||(11148510-11148574)
chr5 (1-64)||(11767999-11768062)
chr5 (1-64)||(12401191-12401254)
chr5 (3-63)||(15479469-15479529)
chr5 (5-64)||(17402934-17402994)
chr5 (1-60)||(18449264-18449323)
chr5 (1-64)||(32634707-32634770)
chr5 (1-64)||(32912037-32912101)
chr5 (1-65)||(33037518-33037582)
chr5 (1-29)||(36786267-36786295)
chr5 (1-64)||(37700459-37700523)
chr5 (1-60)||(43196633-43196693)
[»] chr2 (44 HSPs)
chr2 (1-64)||(7648391-7648454)
chr2 (1-62)||(17826052-17826113)
chr2 (3-66)||(1573702-1573764)
chr2 (1-63)||(22888830-22888892)
chr2 (1-62)||(8555300-8555360)
chr2 (1-66)||(9207587-9207652)
chr2 (1-69)||(13553141-13553209)
chr2 (1-64)||(1889146-1889209)
chr2 (1-64)||(11229330-11229393)
chr2 (1-64)||(15283259-15283322)
chr2 (1-64)||(27307240-27307303)
chr2 (1-64)||(29684620-29684684)
chr2 (1-64)||(30977888-30977952)
chr2 (1-64)||(34144560-34144623)
chr2 (1-63)||(3196096-3196158)
chr2 (2-60)||(4299535-4299594)
chr2 (1-63)||(13850193-13850255)
chr2 (1-63)||(18723594-18723657)
chr2 (1-63)||(32688553-32688615)
chr2 (2-64)||(44254598-44254661)
chr2 (1-62)||(7502436-7502498)
chr2 (1-66)||(12498644-12498710)
chr2 (1-62)||(13347823-13347885)
chr2 (1-66)||(36909852-36909917)
chr2 (1-62)||(38246760-38246821)
chr2 (3-64)||(38257675-38257737)
chr2 (1-64)||(5167749-5167814)
chr2 (1-65)||(11442670-11442734)
chr2 (1-62)||(34945099-34945160)
chr2 (1-69)||(36132968-36133036)
chr2 (1-69)||(39449125-39449194)
chr2 (1-65)||(44484665-44484729)
chr2 (1-69)||(44711997-44712066)
chr2 (1-64)||(2013294-2013357)
chr2 (1-64)||(5031922-5031986)
chr2 (1-60)||(9194432-9194492)
chr2 (1-29)||(9695070-9695098)
chr2 (1-68)||(10687936-10688003)
chr2 (5-64)||(14954612-14954671)
chr2 (1-65)||(18254218-18254282)
chr2 (1-64)||(35171235-35171298)
chr2 (1-64)||(36802895-36802959)
chr2 (1-64)||(41353506-41353569)
chr2 (1-64)||(42665821-42665884)
[»] chr8 (36 HSPs)
chr8 (1-69)||(36064024-36064092)
chr8 (1-68)||(8645160-8645228)
chr8 (1-64)||(27630896-27630959)
chr8 (1-64)||(34473948-34474011)
chr8 (1-63)||(32174954-32175016)
chr8 (1-63)||(45529254-45529317)
chr8 (1-65)||(3946238-3946303)
chr8 (1-65)||(30927940-30928004)
chr8 (1-65)||(42443102-42443166)
chr8 (1-64)||(4994380-4994444)
chr8 (1-64)||(41600308-41600372)
chr8 (1-64)||(45101395-45101458)
chr8 (1-40)||(12490781-12490820)
chr8 (1-63)||(41406865-41406927)
chr8 (1-66)||(16966782-16966848)
chr8 (3-64)||(44711977-44712038)
chr8 (1-73)||(6105445-6105517)
chr8 (4-64)||(11223871-11223931)
chr8 (1-65)||(31596946-31597011)
chr8 (8-41)||(33958124-33958157)
chr8 (1-65)||(34970205-34970269)
chr8 (5-69)||(35633982-35634046)
chr8 (1-64)||(1871622-1871686)
chr8 (1-64)||(6004943-6005006)
chr8 (1-64)||(9431294-9431357)
chr8 (1-29)||(10344358-10344386)
chr8 (1-64)||(11879499-11879562)
chr8 (1-64)||(11896915-11896978)
chr8 (1-64)||(12045662-12045725)
chr8 (1-64)||(13970918-13970982)
chr8 (2-62)||(17492530-17492590)
chr8 (3-62)||(20995069-20995128)
chr8 (1-64)||(29440530-29440594)
chr8 (3-63)||(38576410-38576469)
chr8 (1-64)||(41273514-41273577)
chr8 (1-64)||(41293730-41293793)
[»] chr3 (42 HSPs)
chr3 (1-65)||(7294108-7294173)
chr3 (1-64)||(108430-108493)
chr3 (1-63)||(16969575-16969637)
chr3 (1-74)||(44334810-44334883)
chr3 (1-64)||(7223-7286)
chr3 (1-64)||(35376560-35376623)
chr3 (1-63)||(53718049-53718110)
chr3 (1-64)||(53932400-53932463)
chr3 (1-64)||(5114077-5114140)
chr3 (2-64)||(20215947-20216009)
chr3 (1-63)||(36925745-36925805)
chr3 (1-63)||(37927213-37927276)
chr3 (1-67)||(43904969-43905036)
chr3 (2-64)||(49983360-49983423)
chr3 (1-69)||(1901935-1902003)
chr3 (1-69)||(1911381-1911449)
chr3 (1-69)||(20080067-20080136)
chr3 (1-65)||(24095414-24095479)
chr3 (3-63)||(30863086-30863147)
chr3 (9-69)||(30909023-30909084)
chr3 (1-42)||(42358647-42358688)
chr3 (1-69)||(45150275-45150343)
chr3 (1-65)||(50206978-50207043)
chr3 (5-68)||(2482687-2482750)
chr3 (10-69)||(5398912-5398971)
chr3 (1-64)||(6126453-6126516)
chr3 (1-69)||(7351647-7351715)
chr3 (1-64)||(10206981-10207045)
chr3 (1-64)||(26279883-26279946)
chr3 (1-64)||(26996315-26996379)
chr3 (1-68)||(29573364-29573432)
chr3 (3-62)||(31206862-31206921)
chr3 (1-64)||(32931927-32931990)
chr3 (1-65)||(36671023-36671087)
chr3 (1-64)||(36818955-36819018)
chr3 (1-65)||(44813132-44813196)
chr3 (1-65)||(46852140-46852204)
chr3 (1-29)||(47056535-47056563)
chr3 (1-64)||(48405409-48405473)
chr3 (1-68)||(51464281-51464348)
chr3 (1-64)||(52727457-52727520)
chr3 (1-64)||(54773762-54773826)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-64)||(27338-27401)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-60)||(34802-34862)
[»] chr4 (57 HSPs)
chr4 (1-64)||(4915681-4915745)
chr4 (1-64)||(17475321-17475385)
chr4 (1-64)||(24235319-24235382)
chr4 (1-64)||(38864744-38864808)
chr4 (1-63)||(33860647-33860710)
chr4 (1-63)||(38792898-38792960)
chr4 (1-63)||(40693631-40693694)
chr4 (1-66)||(39344988-39345054)
chr4 (5-62)||(336820-336877)
chr4 (1-65)||(40409175-40409239)
chr4 (1-64)||(3222988-3223051)
chr4 (1-64)||(5932165-5932229)
chr4 (5-64)||(8026766-8026825)
chr4 (1-68)||(17363225-17363292)
chr4 (1-68)||(31804338-31804405)
chr4 (1-64)||(37514140-37514204)
chr4 (1-64)||(46566928-46566991)
chr4 (1-64)||(49768878-49768941)
chr4 (1-64)||(51389315-51389378)
chr4 (1-63)||(3078916-3078979)
chr4 (1-67)||(4514274-4514340)
chr4 (1-63)||(8680941-8681003)
chr4 (1-67)||(10994161-10994227)
chr4 (1-63)||(21617183-21617246)
chr4 (1-67)||(31076050-31076117)
chr4 (1-63)||(44165909-44165971)
chr4 (2-64)||(47288081-47288144)
chr4 (1-64)||(49194883-49194945)
chr4 (1-64)||(50890082-50890145)
chr4 (1-63)||(52392234-52392296)
chr4 (1-64)||(55510859-55510921)
chr4 (1-66)||(24209796-24209861)
chr4 (1-66)||(30079843-30079909)
chr4 (1-63)||(40721973-40722035)
chr4 (1-62)||(2268516-2268577)
chr4 (3-64)||(3286817-3286878)
chr4 (1-69)||(4577551-4577619)
chr4 (3-63)||(9032780-9032840)
chr4 (1-64)||(22893868-22893930)
chr4 (1-64)||(22945536-22945598)
chr4 (1-66)||(29175224-29175289)
chr4 (1-65)||(34116549-34116613)
chr4 (1-65)||(41082316-41082381)
chr4 (1-69)||(51887657-51887726)
chr4 (1-64)||(4896509-4896572)
chr4 (1-64)||(5208336-5208399)
chr4 (1-64)||(6953397-6953460)
chr4 (1-64)||(13086021-13086085)
chr4 (1-60)||(19233724-19233784)
chr4 (1-29)||(19910846-19910874)
chr4 (1-64)||(22819648-22819712)
chr4 (1-64)||(39158104-39158168)
chr4 (1-64)||(43168723-43168786)
chr4 (1-64)||(44257738-44257802)
chr4 (1-64)||(44368211-44368274)
chr4 (5-65)||(51107454-51107514)
chr4 (1-64)||(51296198-51296261)
[»] scaffold0522 (1 HSPs)
scaffold0522 (1-63)||(2513-2575)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-66)||(19633-19699)
[»] scaffold0154 (1 HSPs)
scaffold0154 (2-65)||(9858-9921)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-68)||(3935-3999)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-64)||(199265-199328)


Alignment Details
Target: chr1 (Bit Score: 174; Significance: 2e-93; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 5 - 365
Target Start/End: Complemental strand, 3100501 - 3100145
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctattttgtttaggttaccattgctgttgaccaaattcatat 104  Q
    ||||| |||||||||| | ||||||||| |||||||| |||||| |||||||||||||||||||||||||  |||||||| || ||||||||||||||||    
T  3100501 tatgaaagagaaagttattcaaaaaattatcacaaataaatgtacaaatatcatttctctattttgtttaaattaccattactattgaccaaattcatat 3100402  T
Q  105 tttgttattaggtaatgataggtattaatacaatgccttgt----nnnnnnnnnnnngtaatacaacttgtctgtgttataaatagtctcacatcaaatt 200  Q
    |||||||||||||||||||||||| | ||||||||||||||                ||||||||||||          |||||||||||||||||||||    
T  3100401 tttgttattaggtaatgataggtaatgatacaatgccttgtaaaaaaaaaaaaaaaagtaatacaactt----------taaatagtctcacatcaaatt 3100312  T
Q  201 agaaattatatgaatatatgtttataa-taggtataattatcacctcataaccgg-nnnnnnnggccatcttcgtatttaaatgttggttacattcatcg 298  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||        ||| |||||||||||||||||||||||||||||||||    
T  3100311 agagattatatgaatatatgtttataagtaggtataattatcacctcataaccggttttttttggctatcttcgtatttaaatgttggttacattcatcg 3100212  T
Q  299 tttttctttccagcttgctcaaagttgacatgttcgtcttatttactaaactactaaagtacccgac 365  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3100211 tttttctttccagcttgcacaaagttgacatgttcgtcgtatttactaaactactaaggtacccgac 3100145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40610291 - 40610228
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  40610291 tgagtatgagagagaaggttgtc-aaaaaattgtcataaaatgaatgtataaatatcatttctct 40610228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20288348 - 20288411
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||| ||||| |||||||||| || ||||| ||||||||||||||    
T  20288348 tgagtatgagagagaaagttgtctaaaaagttgtcacaaattggatgtacaaatatcatttctc 20288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 51703465 - 51703524
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||| ||| ||||| ||||| || |||||||||| ||||||||||||||||||||    
T  51703465 tatgagagataaaattgtcaaaaaagttatcacaaatgattgtataaatatcatttctct 51703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25130765 - 25130696
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattttg 70  Q
    |||||||||||||||||||||| | |||| |||||||||| ||| |||| ||||||||||| |||||||||    
T  25130765 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattgattgtacaaatatcatttttctattttg 25130696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34941929 - 34941994
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||| | |||||||||||| ||||||  ||| |||||||||||||||||    
T  34941929 tgagtatgagagagaaagttgt-ctaaaaattgtcacaaaatgatagtacaaatatcatttctctat 34941994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30530583 - 30530647
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| | |||| ||||||| |||||  |||||||||||||||||||||    
T  30530583 tgagtatgagagagaaagttgt-ctaaaagttgtcacaaaatggttgtataaatatcatttctcta 30530647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50775165 - 50775234
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtc-acaaatgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||||  |||||||||| | |||| | ||||||||||||||| |||| ||||    
T  50775165 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaaataattgtataaatatcattactctttttt 50775234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 51193140 - 51193204
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||| ||||||||| |  ||||| ||||| ||||||||||||||||    
T  51193140 tgagtatgagagagaaagttgtcc-aaaaattgttataaaatggatgtacaaatatcatttctcta 51193204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1790571 - 1790507
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| |||||| |||||||||||  |||||||||||||||    
T  1790571 tgagtatgagagagaaagttgttgcaaaagttgtcaccaaatgaatgttcaaatatcatttctct 1790507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11097893 - 11097956
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| ||||||| ||||| ||||| |||||||||||||||    
T  11097893 tgagtatgagagagaaagttgttc-aaaagttgtcacaaaatggatgtacaaatatcatttctct 11097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30536054 - 30535990
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattg-tcacaaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||||||| | | |||||| |||| |||||||||||||||    
T  30536054 tgagtatgagagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaatatcatttctct 30535990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 8828135 - 8828193
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||| | |||||||||| |||||| |||  |||||||||||||||    
T  8828135 tatgagagagaaagttgtc-acaaaattgtcaaaaatgattgttcaaatatcatttctct 8828193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12657284 - 12657221
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||| ||  ||||||||| | |||||| |||  |||||||||||||||    
T  12657284 tgagtatgagagagaaagttatctcaaaaattgtaaaaaatgattgttcaaatatcatttctct 12657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16987001 - 16986938
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  || |||| ||| |||||||||||  ||||||||||||||    
T  16987001 tgagtatgagagagaaagttgtcacaataattatcaccaaatgaatgttcaaatatcatttctc 16986938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25995522 - 25995460
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| | |||| |||||||||| ||| |||| ||||||||||||||    
T  25995522 tgagtatgagagagaaagttgtac-aaaacttgtcacaaattgattgtacaaatatcatttctc 25995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 32938919 - 32938853
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaat-gtataaatatcatttctctatttt 69  Q
    ||||| ||||||||||||||  ||||||||||||||||| ||| ||| |||||||||||||| |||||    
T  32938919 agtataagagagaaagttgtt-aaaaaattgtcacaaattaattgtacaaatatcatttctcaatttt 32938853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33100870 - 33100807
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||| ||||| |||| | |||||  |||  |||||||||||||||    
T  33100870 tgagtatgagagagaaagttgtcaaaaaagttgtaaaaaatggttgttcaaatatcatttctct 33100807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 45333630 - 45333567
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||  |||| |||| | |||||| |||  |||||||||||||||||    
T  45333630 agtatgagagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttctctat 45333567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 50226889 - 50226951
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||| |||||| |||||||||| ||  |||| |||||||||||||||    
T  50226889 gagtatgagagagaaagttgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctct 50226951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3558909 - 3558847
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||| ||  |||| |||||| ||| ||| ||||||||||||||||||    
T  3558909 tgagtatgagagagaaagttatcataaaagttgtcaaaaattgattgtataaatatcatttct 3558847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20565126 - 20565192
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||||   ||||||||| || ||||| ||||  |||||||||||||||||    
T  20565126 tgagtatgagagagaaagttgttgcaaaaattgttactaaatggatgttcaaatatcatttctctat 20565192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27465066 - 27465128
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  |||| |||| | |||||  ||| |||||||||||||||    
T  27465066 tgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgtttaaatatcatttctc 27465128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31427966 - 31428031
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctat 66  Q
    ||||||||| |||||||||||| ||| ||||||||||||| ||  |||| |||||||||||||||||    
T  31427966 tgagtatgatagagaaagttgt-caagaaattgtcacaaagtggttgtacaaatatcatttctctat 31428031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33054096 - 33054158
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttct 62  Q
    ||||||||||||||||||||||   |||| ||||||| ||||||||||  |||||||||||||    
T  33054096 tgagtatgagagagaaagttgtagcaaaagttgtcacaaaatgaatgttcaaatatcatttct 33054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36690581 - 36690646
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||| ||||||||||| | ||| ||  |||| |||||||||||||||||    
T  36690581 tgagtatgagagagaaagttgt-caaaaaattgtgagaaattggttgtacaaatatcatttctctat 36690646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36706682 - 36706747
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||| ||||||||||| | ||| ||  |||| |||||||||||||||||    
T  36706682 tgagtatgagagagaaagttgt-caaaaaattgtgagaaattggttgtacaaatatcatttctctat 36706747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48871964 - 48872025
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||||| |||||||||||||||||| ||||||| |||   |||| ||||||||||||||    
T  48871964 tgagtatgag-gagaaagttgtccaaaaagttgtcacgaatagttgtacaaatatcatttctc 48872025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8411726 - 8411791
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  ||||||||||||||||    
T  8411726 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 8411791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44641912 - 44641976
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| ||||||||||| | ||| ||  |||| ||||||||||||||||    
T  44641912 tgagtatgagagagaaagttgt-caaaaaattgtaataaagtggttgtacaaatatcatttctcta 44641976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48872960 - 48873022
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||| ||  |||| |||||||||| ||  ||||||||||||||||||||    
T  48872960 tgagtatgagagagaaagttctc--aaaagttgtcacaaagtggttgtataaatatcatttctct 48873022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 366719 - 366656
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| || ||| ||| ||  ||||||||||||||||||||    
T  366719 tgagtatgagagagaaagttgt-caaaaagttatcagaaagtggttgtataaatatcatttctct 366656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7078509 - 7078572
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| ||||||| ||||  ||||| |||||||||||||||    
T  7078509 tgagtatgagagagaaagttgttc-aaaagttgtcacaaaatagatgtacaaatatcatttctct 7078572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10890054 - 10890118
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| ||||||  ||||| ||||  |||||||||||||||    
T  10890054 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 10890118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11812449 - 11812386
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||| | ||||||||| ||||||||||||| |||||| |||| || ||||||||||||    
T  11812449 tgagtatgagaaataaagttgtc-aaaaaattgtcacaaaatgattgtacaactatcatttctct 11812386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15705070 - 15705134
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| ||||||  ||||| ||||  |||||||||||||||    
T  15705070 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 15705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 26547292 - 26547233
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||| | |||||||||||| ||||  ||||| |||||||||||||||    
T  26547292 tatgagagagaaagttgttc-aaaaattgtcacaaaatatatgtacaaatatcatttctct 26547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27352692 - 27352629
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||| |||| || |||| |||||  |||| |||||||||||||||    
T  27352692 tgagtatgagagagaaagttgtcc-aaaagttatcacaaaatggttgtacaaatatcatttctct 27352629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27895769 - 27895812
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaat 45  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||    
T  27895769 tgagtatgagagagaaagttgt-caaaaaattattacaaatgaat 27895812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30439312 - 30439249
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||  |||| |||||||||||||||    
T  30439312 tgagtatgagagataaagttgt-caaaaaattgtcataaattggttgtacaaatatcatttctct 30439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36669379 - 36669442
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||| |||||||| | ||||||| ||||||| ||| |||| |||||||||||||||    
T  36669379 tgagtatgagagaaaaagttgtac-aaaaattatcacaaattgattgtacaaatatcatttctct 36669442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 43056778 - 43056750
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  43056778 tgagtatgagagagaaagttgtccaaaaa 43056750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44112516 - 44112453
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||| | ||| ||  |||| |||||||||||||||    
T  44112516 tgagtatgagagagaaagttgt-caaaaaattgtaataaagtggttgtacaaatatcatttctct 44112453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 47113336 - 47113308
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  47113336 tgagtatgagagagaaagttgtccaaaaa 47113308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49596297 - 49596234
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||| |  |||||  |||| |||||||||||||||    
T  49596297 tgagtatgagagagaaagttgt-caaaaaattgtaataaaatggttgtacaaatatcatttctct 49596234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50328149 - 50328213
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||| ||||||||||||   |||| |||||||||| || |||| ||||||||||||||||    
T  50328149 tgagtatgaaagagaaagttgttgcaaaagttgtcacaaagtggatgtttaaatatcatttctct 50328213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51286375 - 51286439
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| ||||||  |||| |||||  |||||||||||||||    
T  51286375 tgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttctct 51286439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52362545 - 52362481
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| ||||||  ||||| ||||  |||||||||||||||    
T  52362545 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 52362481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12102718 - 12102783
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||| || ||||||||||||||||||| || | |||||||||||||||||    
T  12102718 tgagtatgagagagaaagttatcaaaaaaattgtcacaaatgattgaacaaatatcatttctctat 12102783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19426642 - 19426574
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||| |||||| ||||||| |||||  |||| ||||||||||||||||||||    
T  19426642 tgagtatgagagagaaagttgt-caaaaagttgtcacaaaatggttgtacaaatatcatttctctatttt 19426574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 155990 - 156054
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||| || || |||||||||| || ||||| |||||||||||||||    
T  155990 tgagtatgagagagaaagttgtctaagaagttgtcacaaagtggatgtacaaatatcatttctct 156054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 42194916 - 42194956
Alignment:
Q  24 caaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  42194916 caaaaaattgtcacaaatgaatgtacaaatatcatttctct 42194956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32933609 - 32933547
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||| ||||| ||||| ||||||||||| | |||| |||||||||||||||    
T  32933609 tgagtatgagagagaaaattgtc-aaaaatttgtcacaaataattgtacaaatatcatttctct 32933547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37149498 - 37149561
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaa-ttgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||| || |||||| ||||||||||||  |||| ||||||||||||||    
T  37149498 tgagtatgagagagaaagttctctaaaaaagttgtcacaaatggttgtacaaatatcatttctc 37149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 37899223 - 37899286
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||  |||||||||||| ||||| ||||  ||||||||||||||||    
T  37899223 agtatgagagagaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcatttctcta 37899286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40842467 - 40842405
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||    
T  40842467 tgagtatgagagagaaagttgt-caaaagattgtcacaaagtggatgtacaaatatcatttctc 40842405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43079641 - 43079707
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatt 67  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||  |||| ||||||||||||||||||    
T  43079641 tgagtatgagagagaaagttgtcc-aaaaattatcacaaagtggttgtacaaatatcatttctctatt 43079707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33180718 - 33180783
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||||| |||||  |||| ||||||| ||||||||||  ||||||||||||||||    
T  33180718 tgagtatgagagagaaaattgtcataaaagttgtcacaaaatgaatgttcaaatatcatttctcta 33180783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13152655 - 13152591
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| |||||| |||||  |||  ||||||||||||||||    
T  13152655 tgagtatgagagagaaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcatttctcta 13152591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32918989 - 32919052
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||| | || |||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  32918989 tgagtatgagaaataatgttgtc-aaaaaattgtcacaaaatgattgtataaatatcatttctct 32919052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46829542 - 46829478
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  ||||||||| || |||||  |||| |||||||||||||||    
T  46829542 tgagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctct 46829478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5198766 - 5198832
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctattt 68  Q
    ||||||| | ||||||||||||| |||| |||||||||||| | |||| ||||||||||| |||||||    
T  5198766 tgagtataaaagagaaagttgtc-aaaagattgtcacaaataattgtacaaatatcatttttctattt 5198832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34978359 - 34978296
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  ||||||||||| ||| ||| |||  ||||||||||||||    
T  34978359 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcatttctc 34978296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2790239 - 2790178
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||  |||| |||||||||||||    
T  2790239 tgagtatgagagagaaagttgt-caaaaaattgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31844613 - 31844675
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    ||||||| | ||||||| |||||  ||||||||||||||||| ||||  ||||||||||||||    
T  31844613 tgagtataaaagagaaaattgtcataaaaattgtcacaaatggatgttcaaatatcatttctc 31844675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 36920863 - 36920798
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||| ||||||||||| | |||||   ||| ||||||||||||||| ||||    
T  36920863 agtatgagagagaaagttgt-caaaaaattgttaaaaatggtagtacaaatatcatttctctttttt 36920798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27164846 - 27164910
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||| | | |||| |||||||||| ||| |||| ||||||||||||||||    
T  27164846 tgagtatgagagagaaagttatac-aaaagttgtcacaaattgattgtacaaatatcatttctcta 27164910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35452581 - 35452646
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  ||||||| ||| |||||| ||||  || |||||||||||||    
T  35452581 tgagtatgagagagaaagttgtcacaaaaattatcaccaaatggatgttcaagtatcatttctcta 35452646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37899386 - 37899321
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||| |||||||||  |||| ||||||| ||||| ||||  ||||||||||||||||    
T  37899386 tgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctcta 37899321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44495105 - 44495170
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| |||||| |||||| || |  ||||||||||||||||    
T  44495105 tgagtatgagagagaaagttgtcataaaagttgtcatcaaatggatattcaaatatcatttctcta 44495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16980360 - 16980296
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||| ||||||||||||||   |||| ||||||| ||||||||||  |||||||||||||||    
T  16980360 tgagtataagagagaaagttgttgcaaaagttgtcacaaaatgaatgttcaaatatcatttctct 16980296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30864426 - 30864489
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| |||||||||||||||    
T  30864426 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattggttgtacaaatatcatttctct 30864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38023433 - 38023496
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | ||||||| ||||||| ||  |||| |||||||||||||||    
T  38023433 tgagtatgagagagaaagttgt-ctaaaaattatcacaaagtggttgtacaaatatcatttctct 38023496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41966394 - 41966331
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||| | ||||||||||| |||||||||||||||| ||  |||| |||||||||||||||    
T  41966394 tgagtatgaaatagaaagttgtc-aaaaaattgtcacaaagtggttgtacaaatatcatttctct 41966331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17417244 - 17417307
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcaca-aatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||||    
T  17417244 tgagtatgagagagaaagttgtcc-aaaaattgtcacataatgattgtacaaatatcatttctct 17417307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18141309 - 18141375
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||||  |||| |||||| ||| ||||||| ||||||||||||||||||    
T  18141309 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatgaatgtttaaatatcatttctctat 18141375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3199023 - 3198958
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  ||||||| ||| |||||||||||  ||||||||||||||||    
T  3199023 tgagtatgagagagaaagttgtcataaaaattatcaccaaatgaatgttcaaatatcatttctcta 3198958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30906672 - 30906736
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    ||||||||||||| ||||||||| ||||| |||||| ||| |||||||| ||||||||||||||||    
T  30906672 tgagtatgagagataaagttgtc-aaaaagttgtcataaaatgaatgtagaaatatcatttctcta 30906736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2242030 - 2242094
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtc-acaaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||||||||| | |||||| |||  |||||||||||||||    
T  2242030 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctct 2242094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15722512 - 15722575
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||| |||| |||||||||||||||    
T  15722512 tgagtatgagagagaaggttgt-caaaaagttgtcacaaaatgattgtacaaatatcatttctct 15722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2689072 - 2689135
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  |||||||||||  ||||| ||||  ||||||||||||||    
T  2689072 tgagtatgagagagaaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctc 2689135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6531191 - 6531254
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||| | || ||||||| ||||| ||||  ||||||||||||||    
T  6531191 tgagtatgagagagaaagttgtcccataagttgtcacaaaatggatgttcaaatatcatttctc 6531254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 9954608 - 9954546
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||| |||||| |||||||||| ||  |||| ||||||||||||||||    
T  9954608 agtatgagagagaaagttgt-caaaaagttgtcacaaattggttgtacaaatatcatttctcta 9954546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16533269 - 16533327
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcattt 60  Q
    ||||||||||||| ||||||||| |||| |||||||||||||  |||| |||||||||||    
T  16533269 tgagtatgagagataaagttgtctaaaa-attgtcacaaatggttgtacaaatatcattt 16533327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13143390 - 13143448
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcat 58  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||||  |||||||||    
T  13143390 tgagtatgagagagaaagttgttgcaaaaattgtcacaaaatgaatgttcaaatatcat 13143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30152538 - 30152604
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||||   |||| ||||||| ||||||||||  ||||||||||| |||||    
T  30152538 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttttctat 30152604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20822876 - 20822941
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| ||||||  ||||| ||||  ||||||||||||||||    
T  20822876 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctcta 20822941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23653902 - 23653966
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||| | |||| || ||| ||| || |||| |||||||||||||||||    
T  23653902 tgagtatgagagagaaagttgt-ctaaaagttatcaaaaaagattgtacaaatatcatttctctat 23653966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3339508 - 3339571
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| ||||||| |||||  |||| |||||||||||||||    
T  3339508 tgagtatgagagagaaagttgtac-aaaagttgtcacaaaatggttgtacaaatatcatttctct 3339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5327600 - 5327664
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||    
T  5327600 tgagtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttctct 5327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 11785413 - 11785354
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||| ||||||||||| ||||||||||||| |||||  |||| |||||||||||||||    
T  11785413 tatgagatagaaagttgtc-aaaaaattgtcacaaaatggttgtacaaatatcatttctct 11785354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16337079 - 16337142
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||| || || ||||||||||||| ||| ||| |||| |||||||||||||||    
T  16337079 tgagtatgagagagaaggtagt-caaaaaattgtcataaagtgattgtacaaatatcatttctct 16337142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24842431 - 24842367
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||| ||||  |||| ||||||  ||||||||||  |||||||||||||||    
T  24842431 tgagtatgagagagaaagctgtcacaaaagttgtcattaaatgaatgttcaaatatcatttctct 24842367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28965849 - 28965912
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||| || |||||  |||| |||||||||||||||    
T  28965849 tgagtatgagagagaaagttgt-caaaaagttgtaacaaaatggttgtacaaatatcatttctct 28965912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29383619 - 29383556
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||||| ||| ||  |||| |||||||||||||||    
T  29383619 tgagtatgagagagaaagttgt-caaaaagttgtcagaaagtggttgtacaaatatcatttctct 29383556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30796084 - 30796147
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||  |||| |||||||||||||||    
T  30796084 tgagtatgaaagagaaagttgt-aaaaaaattgtcacaaagtggttgtacaaatatcatttctct 30796147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12661956 - 12662018
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||    
T  12661956 tgagtatgagagagaaagttgt-caaaaaattgtcacaaagtggatgtacaaatatcatttctc 12662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33243748 - 33243810
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||| |||||||||||||| ||||||||||||||||||  | || ||||||||||||||    
T  33243748 tgagtatgcgagagaaagttgtcaaaaaaattgtcacaaatggttatacaaatatcatttctc 33243810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19839994 - 19840058
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||||  |||||||||||||||    
T  19839994 tgagtatgagagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctct 19840058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8920141 - 8920075
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||||  |||| ||||||| ||||| ||||  |||||||||||||||||    
T  8920141 tgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctat 8920075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8267828 - 8267893
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||||||||||   |||||||||||| ||||| ||||  ||||||||||||||||    
T  8267828 tgagtatgagagagaaagttgttgcaaaaattgtcactaaatggatgttcaaatatcatttctcta 8267893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20591483 - 20591546
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||| | |||||||||||||    
T  20591483 tgagtatgagagagaaagttgt-caaaaaattgtcaaaaagtggatgtacatatatcatttctct 20591546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26660420 - 26660483
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||||||||||||    
T  26660420 tgagtatgagagagaaagttgt-caagaagttgtcacaaaatggatgtacaaatatcatttctct 26660483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26932012 - 26932075
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||||||||||||    
T  26932012 tgagtatgagagagaaagttgt-caagaagttgtcacaaaatggatgtacaaatatcatttctct 26932075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38501005 - 38500942
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||| |||||||||||| |||||||||||||| |||||  |||| |||||||||||||||    
T  38501005 tgagtatgaaagagaaagttgt-caaaaaattgtcacaaaatggttgtacaaatatcatttctct 38500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3109595 - 3109658
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||| ||||||  |||| |||||||||| ||| |||| ||||||||||||||    
T  3109595 tgagtatgagagagaatgttgtcacaaaagttgtcacaaattgattgtacaaatatcatttctc 3109658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21064234 - 21064297
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||   |||| ||||||| ||||||||||  ||||||||||||||    
T  21064234 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctc 21064297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34381074 - 34381012
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| |||||| |||||||||| ||  |||| ||||||||||||||    
T  34381074 tgagtatgagagagaaagttgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39595334 - 39595272
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| |||||| |||||||||| ||  |||| ||||||||||||||    
T  39595334 tgagtatgagagagaaagttgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39788715 - 39788777
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcaca-aatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||| |||| |||||||| ||||  |||| ||||||||||||||    
T  39788715 tgagtatgagagagaaagttgtcc-aaaagttgtcacataatggttgtacaaatatcatttctc 39788777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41173315 - 41173253
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttct 62  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| |||| ||||||||||||||    
T  41173315 tgagtatgagagagaaagttgttacaaaagttgtcacaaaatggatgtttaaatatcatttct 41173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4954528 - 4954464
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaa-tgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| | | || ||||||||||| || |||| ||||||||||||||||    
T  4954528 tgagtatgagagagaaagttgtac-ataagttgtcacaaattaattgtacaaatatcatttctcta 4954464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6964375 - 6964442
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaa---ttgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||| ||||||   || ||||||| ||| |||| |||||||||||||||    
T  6964375 tgagtatgagagagaaagttgtcaaaaaaaaagttttcacaaattgattgtacaaatatcatttctct 6964442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9594540 - 9594476
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| ||||||||||||||||    
T  9594540 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattggttgtacaaatatcatttctcta 9594476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 14073111 - 14073051
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||| || || ||||  |||||||||||| ||||| |||||||||||||||    
T  14073111 agtatgagagagaaaattatc-aaaaggttgtcacaaatggatgtacaaatatcatttctct 14073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18695381 - 18695316
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| |||| || |||||  |||| ||||||||||||||||    
T  18695381 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcta 18695316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36713187 - 36713251
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| ||| || |||||||||| ||  |||| ||||||||||||||||    
T  36713187 tgagtatgagagagaaagttgt-caagaagttgtcacaaagtggttgtacaaatatcatttctcta 36713251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1774292 - 1774355
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||| || |||||||||| |  ||||| |||||||||||||||    
T  1774292 tgagtatgagagagaaagttgt-caagaagttgtcacaaagtagatgtacaaatatcatttctct 1774355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3141557 - 3141498
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcattt 60  Q
    ||||||||| |||| |||||||| |||||||||||||||| ||  ||||||||||||||||    
T  3141557 tgagtatgatagaggaagttgtc-aaaaaattgtcacaaagtggttgtataaatatcattt 3141498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5042311 - 5042247
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||| ||||||||   |||||||||||| ||||| ||||  |||||||||||||||    
T  5042311 tgagtatgagagataaagttgttgcaaaaattgtcactaaatggatgttcaaatatcatttctct 5042247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6241684 - 6241624
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcattt 60  Q
    ||||||||||||| |||||||||  |||||||||||| |||| |||||  |||||||||||    
T  6241684 tgagtatgagagataaagttgtcataaaaattgtcacaaaataaatgttcaaatatcattt 6241624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11148574 - 11148510
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||| ||||||  |||| |||||| ||| ||| |||| |||||||||||||||    
T  11148574 tgagtatgagagagaatgttgtcacaaaagttgtcaaaaattgattgtacaaatatcatttctct 11148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11767999 - 11768062
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||| ||||||||| ||| || |||||||||| || ||||| |||||||||||||||    
T  11767999 tgagtatgagagggaaagttgt-caagaagttgtcacaaagtggatgtacaaatatcatttctct 11768062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12401254 - 12401191
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||  ||||| |||| ||||| ||| |||| |||||||||||||||    
T  12401254 tgagtatgagagagaaagttgt-aaaaaagttgttacaaattgattgtacaaatatcatttctct 12401191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 15479529 - 15479469
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||  |||| |||| | |||||| |||  ||||||||||||||    
T  15479529 agtatgagagagaaagttgtcataaaagttgtaaaaaatgattgttcaaatatcatttctc 15479469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 17402934 - 17402994
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    ||||||| |||||||||||  ||||||||||| |||||| ||||  |||||||||||||||    
T  17402934 tatgagatagaaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatttctct 17402994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18449323 - 18449264
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcattt 60  Q
    ||||||||||||||||||||||  ||||| |||||||||| || ||||| |||||||||||    
T  18449323 tgagtatgagagagaaagttgt-taaaaagttgtcacaaagtggatgtacaaatatcattt 18449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32634770 - 32634707
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcaca-aatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||| | ||| |||| |||||||||||||||    
T  32634770 tgagtatgagagagaaagttgtac-aaaagttgtcacagattgattgtacaaatatcatttctct 32634707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32912101 - 32912037
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||| |||||  ||||||| |||  ||||||||||  |||||||||||||||    
T  32912101 tgagtatgagagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctct 32912037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33037582 - 33037518
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| |||| | |||||  |||  ||||||||||||||||    
T  33037582 tgagtatgagagagaaagttgtcataaaagttgtaaaaaatggttgttcaaatatcatttctcta 33037518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 36786267 - 36786295
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  36786267 tgagtatgagagagaaagttgtccaaaaa 36786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37700523 - 37700459
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||| ||  || |||||||| |||||| ||||  |||||||||||||||    
T  37700523 tgagtatgagagagaaagttatcacaataattgtcaccaaatggatgttcaaatatcatttctct 37700459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43196633 - 43196693
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcattt 60  Q
    ||||||||||| ||||||||||   |||||||||||| |||| ||||| ||||||||||||    
T  43196633 tgagtatgagaaagaaagttgtaacaaaaattgtcacaaaataaatgtttaaatatcattt 43196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7648454 - 7648391
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||| |||||||||  ||||||||||||||||| ||||  |||||||||||||||    
T  7648454 tgagtatgagagaaaaagttgtcacaaaaattgtcacaaatggatgttcaaatatcatttctct 7648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17826113 - 17826052
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||| ||| |||| ||||||||||||  |||| |||||||||||||    
T  17826113 tgagtatgagagagaaagttatcctaaaagttgtcacaaatggttgtacaaatatcatttct 17826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 1573764 - 1573702
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||| ||||| |||||| ||| || |||| |||||||||||||||||    
T  1573764 agtatgagagagaaagttgtctaaaaa-ttgtcaaaaaagattgtacaaatatcatttctctat 1573702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22888830 - 22888892
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  ||||||||||| |||||  |||  ||||||||||||||    
T  22888830 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaatggttgttcaaatatcatttctc 22888892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8555300 - 8555360
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||||| | ||||||||||| ||| || |||| |||||||||||||    
T  8555300 tgagtatgagagagaaagttgt-ctaaaaattgtcaaaaaagattgtacaaatatcatttct 8555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9207652 - 9207587
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctat 66  Q
    |||||||||||||||||||||||  |||| |||| | |||||| |||  |||||||||||||||||    
T  9207652 tgagtatgagagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttctctat 9207587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13553209 - 13553141
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||||||| ||||||| |||||| ||||||| ||  |||| ||||||||||||||||||||    
T  13553209 tgagtatgagagagaaaattgtcca-aaaattatcacaaagtggttgtacaaatatcatttctctatttt 13553141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1889209 - 1889146
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||  |||| |||||||||||||||    
T  1889209 tgagtatgagagagaaagttgt-caaaaaattgtcagaaagtggttgtacaaatatcatttctct 1889146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11229330 - 11229393
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||| || |||||||||| || ||||| |||||||||||||||    
T  11229330 tgagtatgagagagaaagttgt-caagaagttgtcacaaagtggatgtacaaatatcatttctct 11229393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15283259 - 15283322
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | ||||||||||||||| ||  |||| |||||||||||||||    
T  15283259 tgagtatgagagagaaagttgt-ctaaaaattgtcacaaagtggttgtacaaatatcatttctct 15283322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27307240 - 27307303
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||| |||| |||||||||||||||    
T  27307240 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattgattgtacaaatatcatttctct 27307303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29684620 - 29684684
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||||||||||| |||| |||||  |||||||||||||||    
T  29684620 tgagtatgagagagaaagttgttgcaaaaattgtcactaaataaatgttcaaatatcatttctct 29684684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30977952 - 30977888
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| ||||||| ||||| ||||  |||||||||||||||    
T  30977952 tgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcatttctct 30977888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34144560 - 34144623
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | ||||||||||||||| ||  |||| |||||||||||||||    
T  34144560 tgagtatgagagagaaagttgtac-aaaaattgtcacaaattggttgtacaaatatcatttctct 34144623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3196096 - 3196158
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| | |||| |||||||||| ||| |||| ||||||||||||||    
T  3196096 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattgattgtacaaatatcatttctc 3196158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 4299535 - 4299594
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcattt 60  Q
    |||||||||||||||||||||  ||||| ||||||| ||||||||||  |||||||||||    
T  4299535 gagtatgagagagaaagttgtagaaaaagttgtcacaaaatgaatgttcaaatatcattt 4299594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13850193 - 13850255
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaat-tgtcacaaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| |||||| | | ||| |||||| |||||||||||||||||||    
T  13850193 tgagtatgagagagaaagttgtacaaaaattatatca-aaatgattgtataaatatcatttctc 13850255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18723657 - 18723594
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||   |||||||||||| ||||| ||||  ||||||||||||||    
T  18723657 tgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcatttctc 18723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32688553 - 32688615
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||  |||| ||||||||||||||    
T  32688553 tgagtatgagagagaaagttgt-caaaaaattgtcagaaagtggttgtacaaatatcatttctc 32688615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 44254661 - 44254598
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtcaca-aatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||   |||| |||||||| |||||||||  |||||||||||||||    
T  44254661 gagtatgagagagaaagttgtaacaaaagttgtcacagaatgaatgttcaaatatcatttctct 44254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7502436 - 7502498
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtc-acaaatgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||||||  |||||||||| | |||||  |||| |||||||||||||    
T  7502436 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcatttct 7502498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12498644 - 12498710
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||| |||||||||  ||||||||| | |||||| ||||  |||||||||||||||||    
T  12498644 tgagtatgagagaaaaagttgtcacaaaaattgttaccaaatggatgttcaaatatcatttctctat 12498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13347823 - 13347885
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttct 62  Q
    ||||||||||||||||||||||   |||||||||||| ||||| ||||  |||||||||||||    
T  13347823 tgagtatgagagagaaagttgttgcaaaaattgtcacaaaatggatgttcaaatatcatttct 13347885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36909852 - 36909917
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    |||||||| ||||||||||||||| |||| ||||||| |||||  |||| |||||||||||||||||    
T  36909852 tgagtatgtgagagaaagttgtcc-aaaagttgtcacaaaatggttgtacaaatatcatttctctat 36909917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38246760 - 38246821
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||| | | ||||||||||||||| ||| |||| |||||||||||||    
T  38246760 tgagtatgagagagaaagttctac-aaaaattgtcacaaattgattgtacaaatatcatttct 38246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 38257675 - 38257737
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||| |||||| ||  |||||||||||| |||| ||||| ||||||||||||||||    
T  38257675 agtatgagagaaaaagttatcataaaaattgtcacaaaataaatgtttaaatatcatttctct 38257737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5167749 - 5167814
Alignment:
Q  1 tgagtatgagagagaaagttgtc-caaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||| |||||  |||||||||||||||| ||  |||| |||||||||||||||    
T  5167749 tgagtatgagagagaaaattgtctaaaaaaattgtcacaaagtggttgtacaaatatcatttctct 5167814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11442734 - 11442670
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| ||||||||||| |  |||||  |||| ||||||||||||||||    
T  11442734 tgagtatgagagagaaagttgt-caaaaaattgtaatgaaatggttgtacaaatatcatttctcta 11442670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34945099 - 34945160
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||||||  ||||||| | | |||||| |||  |||||||||||||    
T  34945099 tgagtatgagagagaaagttgtcataaaaattataaaaaatgattgttcaaatatcatttct 34945160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36133036 - 36132968
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||| |||||||| || |||||||||||||| ||  |||| ||||||||||||||| ||||    
T  36133036 tgagtatgagagataaagttgt-cacaaaattgtcacaaagtggttgtacaaatatcatttctctttttt 36132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39449125 - 39449194
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatttt 69  Q
    ||||||||| ||||||||||||   |||| ||||||| ||||| ||||  ||||||||||||||||||||    
T  39449125 tgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctctatttt 39449194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44484665 - 44484729
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| | ||||||||| || |||||  |||| ||||||||||||||||    
T  44484665 tgagtatgagagagaaagttgtac-aaaaattgttacaaaatggttgtacaaatatcatttctcta 44484729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44711997 - 44712066
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatttt 69  Q
    ||||||||| ||||||||||||   |||||||||||| ||||| ||||  |||||||||||||| |||||    
T  44711997 tgagtatgaaagagaaagttgtagcaaaaattgtcacaaaatggatgttcaaatatcatttctcaatttt 44712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2013294 - 2013357
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||| || |||||| |||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  2013294 tgagtacgaaagagaaggttgtc-aaaaaattgtcataaaatgaatgtacaaatatcatttctct 2013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5031986 - 5031922
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| |||| || |||||  |||| |||||||||||||||    
T  5031986 tgagtatgagagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctct 5031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9194492 - 9194432
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcattt 60  Q
    |||||||||||||||||||||||  |||| ||||||| ||||| ||||  |||||||||||    
T  9194492 tgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcattt 9194432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9695070 - 9695098
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  9695070 tgagtatgagagagaaagttgtccaaaaa 9695098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10688003 - 10687936
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattt 68  Q
    ||||||||||||||||||||||   |||| |||||||||| ||  |||| |||||||||||||||||||    
T  10688003 tgagtatgagagagaaagttgt-ataaaagttgtcacaaattgtttgtacaaatatcatttctctattt 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 14954612 - 14954671
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||| | |||| ||||||| ||||| ||||| |||||||||||||||    
T  14954612 tatgagagagaaagttgttc-aaaagttgtcacaaaatgtatgtacaaatatcatttctct 14954671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18254218 - 18254282
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| |||| | |||||  |||  ||||||||||||||||    
T  18254218 tgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcta 18254282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35171235 - 35171298
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |  ||||||||||| |||||  |||| |||||||||||||||    
T  35171235 tgagtatgagagagaaagttgtac-caaaattgtcacaaaatggttgtacaaatatcatttctct 35171298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36802959 - 36802895
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||    
T  36802959 tgagtatgagagagaaagttgtagcaaaagttgtcacaaaatggatgttcaaatatcatttctct 36802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41353506 - 41353569
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||  |||||||| ||| ||| ||| |||| |||||||||||||||    
T  41353506 tgagtatgagagagaaagttgt-taaaaaattatcataaattgattgtacaaatatcatttctct 41353569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42665821 - 42665884
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||| | ||| ||| |||| |||||||||||||||    
T  42665821 tgagtatgagagagaaagttgt-caaaaagttgtaataaagtgattgtacaaatatcatttctct 42665884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36064092 - 36064024
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||||||| ||||||||||  |||||||||| ||| |||| ||||||||||||||||||||    
T  36064092 tgagtatgagagagaaaattgtccaaaag-ttgtcacaaaatgattgtacaaatatcatttctctatttt 36064024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8645228 - 8645160
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctctattt 68  Q
    ||||||||||||||||| |||||| ||||||| ||| |||||| ||||  |||||||||||||||||||    
T  8645228 tgagtatgagagagaaaattgtcccaaaaattatcaccaaatggatgttcaaatatcatttctctattt 8645160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27630959 - 27630896
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||||||||||  ||||| ||||| |||||||||||||||    
T  27630959 tgagtatgagagagaaagttgt-caaaaaattgtcataaaatggatgtacaaatatcatttctct 27630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34474011 - 34473948
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||| ||||| |||| ||||||||||| |||||||| |||||||||||||||    
T  34474011 tgagtatgagagagaaaattgtc-aaaagattgtcacaaagtgaatgtacaaatatcatttctct 34473948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32175016 - 32174954
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||||  |||||||||||||    
T  32175016 tgagtatgagagagaaagttgt-caaaaaattgtcacaaagtggatgtacgaatatcatttctc 32174954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45529254 - 45529317
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||||  ||||||||||||||    
T  45529254 tgagtatgagagagaaagttgttacaaaaattgtcactaaatgaatgttcaaatatcatttctc 45529317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3946303 - 3946238
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| ||||||| ||||| ||||  ||||||||||||||||    
T  3946303 tgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctcta 3946238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30927940 - 30928004
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| | ||||||||||||||| ||  |||| ||||||||||||||||    
T  30927940 tgagtatgagagagaaagttgtac-aaaaattgtcacaaattggttgtacaaatatcatttctcta 30928004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42443166 - 42443102
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| | |||| ||||||| |||||| |||| ||||||||||||||||    
T  42443166 tgagtatgagagagaaagttgt-ctaaaagttgtcactaaatgattgtacaaatatcatttctcta 42443102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4994444 - 4994380
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||| |||||| ||  ||||||||||| |||||| |||| ||||||||||||||||    
T  4994444 tgagtatgagagataaagttatcacaaaaattgtcaacaaatggatgtttaaatatcatttctct 4994380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41600372 - 41600308
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtc-acaaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| ||||| | ||||||||||  |||||||||||||||    
T  41600372 tgagtatgagagagaaagttgtcacaaaagttgtcaataaatgaatgttcaaatatcatttctct 41600308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45101458 - 45101395
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||||||||| ||  |||| |||||||||||||||    
T  45101458 tgagtatgagagagaaagttgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctct 45101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12490781 - 12490820
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa 40  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  12490781 tgagtatgagagagaaagttgtctaaaaagttgtcacaaa 12490820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41406865 - 41406927
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtc-acaaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||  ||||||||||| | |||||| |||| ||||||||||||||    
T  41406865 tgagtatgagagagaaagttgt-taaaaaattgtcaaaaaatgattgtacaaatatcatttctc 41406927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16966848 - 16966782
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||||    
T  16966848 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctat 16966782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 44712038 - 44711977
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaat-gtataaatatcatttctct 64  Q
    ||||||||||||||| ||||| |||||||| | |||||| ||| |||||||||||||||||||    
T  44712038 agtatgagagagaaaattgtc-aaaaaattattacaaattaattgtataaatatcatttctct 44711977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6105445 - 6105517
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgt-cacaaatgaatgtataaatatcatttctctattttgttt 73  Q
    |||||||||||||||||||||| |||||| ||||  | |||||  |||| ||||||||||| ||||||||||||    
T  6105445 tgagtatgagagagaaagttgt-caaaaagttgtaaaaaaatggttgtacaaatatcatttttctattttgttt 6105517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 11223871 - 11223931
Alignment:
Q  4 gtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||||||||||||    
T  11223871 gtatgagagagaaagttgt-caagaagttgtcacaaaatggatgtacaaatatcatttctct 11223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31597011 - 31596946
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||| |||||||  |||||||||||  ||||| ||||  ||||||||||||||||    
T  31597011 tgagtatgagagagagagttgtcacaaaaattgtcataaaatggatgttcaaatatcatttctcta 31596946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 33958124 - 33958157
Alignment:
Q  8 gagagagaaagttgtccaaaaaattgtcacaaat 41  Q
    |||||||||||||||| |||||||||||||||||    
T  33958124 gagagagaaagttgtcaaaaaaattgtcacaaat 33958157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34970269 - 34970205
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| |||||| |||| || ||| || |||| ||||||||||||||||    
T  34970269 tgagtatgagagagaaagttgt-caaaaagttgttacaaaaggattgtacaaatatcatttctcta 34970205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 35633982 - 35634046
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||||||||| ||||| |||||| ||| ||  |||| ||||||||||||||||||||    
T  35633982 tatgagagagaaagttgtc-aaaaagttgtcagaaagtggttgtagaaatatcatttctctatttt 35634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1871622 - 1871686
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||| ||||||  |||| |||||| |||||| ||||  |||||||||||||||    
T  1871622 tgagtatgagagagaatgttgtcacaaaatttgtcaccaaatggatgttaaaatatcatttctct 1871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6005006 - 6004943
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | ||||||||||||||| |   |||| |||||||||||||||    
T  6005006 tgagtatgagagagaaagttgt-ctaaaaattgtcacaaagtagttgtacaaatatcatttctct 6004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9431294 - 9431357
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||| | ||| ||| |||| ||| |||||||||||    
T  9431294 tgagtatgagagagaaagttgt-caaaaaattgttagaaattgattgtacaaagatcatttctct 9431357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 10344386 - 10344358
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  10344386 tgagtatgagagagaaagttgtccaaaaa 10344358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11879499 - 11879562
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||||||||| || | ||| | |||||||||||||    
T  11879499 tgagtatgagagagaaagttgt-caaaaagttgtcacaaagtggacgtacatatatcatttctct 11879562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11896915 - 11896978
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||||||||| || | ||| | |||||||||||||    
T  11896915 tgagtatgagagagaaagttgt-caaaaagttgtcacaaagtggacgtacatatatcatttctct 11896978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12045662 - 12045725
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| ||||||| |||||  |||| |||||||||||||||    
T  12045662 tgagtatgagagagaaagttgt-ctaaaagttgtcactaaatggttgtacaaatatcatttctct 12045725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13970982 - 13970918
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| |||| |  ||||| ||||| |||||||||||||||    
T  13970982 tgagtatgagagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatcatttctct 13970918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 17492590 - 17492530
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttct 62  Q
    |||||||| ||||||| ||||   |||| ||||||||||||| |||| |||||||||||||    
T  17492590 gagtatgacagagaaaattgttacaaaagttgtcacaaatgattgtacaaatatcatttct 17492530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20995069 - 20995128
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttct 62  Q
    |||||||||||||| ||||| |||||| |||||| ||| || |||||||||||||||||||    
T  20995069 agtatgagagagaaggttgtacaaaaa-ttgtcataaaatggatgtataaatatcatttct 20995128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29440530 - 29440594
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||| |||||||||||  |||| || |||| ||||||||||  |||||||||||||||    
T  29440530 tgagtatgagaaagaaagttgtcacaaaagttatcaccaaatgaatgttcaaatatcatttctct 29440594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 38576469 - 38576410
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    ||||||| ||||||||||||  |||||||| ||||||||  ||||| ||||||||||||||    
T  38576469 agtatgaaagagaaagttgta-aaaaaattatcacaaatagatgtaaaaatatcatttctc 38576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41273577 - 41273514
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| |||||||||||||||    
T  41273577 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattgtttgtacaaatatcatttctct 41273514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41293730 - 41293793
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| |||||||||||||||    
T  41293730 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattggttgtaaaaatatcatttctct 41293793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7294108 - 7294173
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||||||||||| || || |||||||||| || ||||| ||||||||||||||||    
T  7294108 tgagtatgagagagaaagttgtctaagaagttgtcacaaagtggatgtacaaatatcatttctcta 7294173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 108493 - 108430
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||||||||| ||  |||| |||||||||||||||    
T  108493 tgagtatgagagagaaagttgt-caaaaaattgtcacaaagtggttgtacaaatatcatttctct 108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16969575 - 16969637
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||| ||||| |||||| |||||  |||  ||||||||||||||    
T  16969575 tgagtatgagagagaaagttgtcaaaaaagttgtcaaaaatggttgttaaaatatcatttctc 16969637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44334810 - 44334883
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattttgttta 74  Q
    ||||||||||||||||||||||| ||||| |||| | ||| ||  |||| |||||||||||||||||||||||||    
T  44334810 tgagtatgagagagaaagttgtc-aaaaagttgtaataaagtggttgtacaaatatcatttctctattttgttta 44334883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7223 - 7286
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||| |||| ||||||  |||||| |||| |||||||||||||||    
T  7223 tgagtatgagagagaaagttgtcc-aaaagttgtcagaaaatgattgtacaaatatcatttctct 7286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35376560 - 35376623
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||||||||||| |||||  |||| |||||||||||||||    
T  35376560 tgagtatgagagagaaagttgt-ctaaaaattgtcacaaaatggttgtacaaatatcatttctct 35376623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 53718110 - 53718049
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  |||| ||||||| ||||| |||| |||||||||||||||    
T  53718110 tgagtatgagagagaaagttgtc--aaaagttgtcacaaaatggatgtttaaatatcatttctc 53718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53932400 - 53932463
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||| ||||||||||| |||||||||||| |||||  |||| |||||||||||||||    
T  53932400 tgagtatgagagtgaaagttgtcc-aaaaattgtcacaaaatggttgtacaaatatcatttctct 53932463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5114140 - 5114077
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||| ||||||||||||||||| |||||||||| | |||||  |||  |||||||||||||||    
T  5114140 tgagtgtgagagagaaagttgtcaaaaaaattgtaaaaaatggttgttcaaatatcatttctct 5114077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 20216009 - 20215947
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||| | ||||||||||||||| ||  |||| |||||||||||||||    
T  20216009 gagtatgagagagaaagttgt-ctaaaaattgtcacaaagtggttgtacaaatatcatttctct 20215947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36925805 - 36925745
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||| |||| |||||  ||||||||||||  ||||||| |||||||||||    
T  36925805 tgagtatgagagagaaaattgttcaaaa--ttgtcacaaatggttgtataactatcatttctc 36925745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37927213 - 37927276
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  |||| |||||| |||||| ||||  ||||||||||||||    
T  37927213 tgagtatgagagagaaagttgtcacaaaagttgtcaccaaatggatgttcaaatatcatttctc 37927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43905036 - 43904969
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatt 67  Q
    ||||||||||||||||||||||   ||||||| |||| ||||| ||||  ||||||||||||||||||    
T  43905036 tgagtatgagagagaaagttgttacaaaaattatcactaaatggatgttcaaatatcatttctctatt 43904969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 49983360 - 49983423
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||| |||| |||| | |||||| ||||  |||||||||||||||    
T  49983360 gagtatgagagagaaagttgtcccaaaagttgtaaccaaatggatgttcaaatatcatttctct 49983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1901935 - 1902003
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| ||||||||||||||| ||||    
T  1901935 tgagtatgagagagaaagttgt-ctaaaagttgtcacaaagtggttgtacaaatatcatttctctttttt 1902003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1911381 - 1911449
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| ||||||||||||||| ||||    
T  1911381 tgagtatgagagagaaagttgt-ctaaaagttgtcacaaagtggttgtacaaatatcatttctctttttt 1911449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20080136 - 20080067
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||||  |||||||||||  ||||| ||||  ||||| ||||||| ||||||    
T  20080136 tgagtatgagagagaaagttgtcacaaaaattgtcattaaatggatgttcaaataccatttctttatttt 20080067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24095414 - 24095479
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  ||||||| |||  ||||| ||||  ||||||||||||||||    
T  24095414 tgagtatgagagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctcta 24095479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 30863086 - 30863147
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||  ||||||||||||||    
T  30863086 agtatgagagagaaagttgtcacaaaaattatcatcaaatggatgttcaaatatcatttctc 30863147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 30909084 - 30909023
Alignment:
Q  9 agagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||||   |||| ||||||| ||||||||||  ||||||||||||||||||||    
T  30909084 agagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctctatttt 30909023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42358647 - 42358688
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatg 42  Q
    |||||||||||||||||||||||  ||||||||||| |||||    
T  42358647 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaatg 42358688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45150275 - 45150343
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||| | |||| ||||||| ||||   ||||||| |||||||||||||||||    
T  45150275 tgagtatgagagagaaagttgt-ctaaaagttgtcacaaaatagttgtataagtatcatttctctatttt 45150343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 50206978 - 50207043
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  ||||||||||||||||    
T  50206978 tgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctcta 50207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 2482687 - 2482750
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctattt 68  Q
    |||||||||||||||||| | |||| ||||||| ||||| ||||| |||||||||||||| ||||    
T  2482687 tatgagagagaaagttgttc-aaaagttgtcacaaaatggatgtacaaatatcatttctcaattt 2482750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 5398971 - 5398912
Alignment:
Q  10 gagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||| |||||||||||||||| ||  |||| ||||||||||||||| ||||    
T  5398971 gagagaaagttgtc-aaaaaattgtcacaaagtggttgtacaaatatcatttctctttttt 5398912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6126516 - 6126453
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaa-atgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||||| ||  |||||||| | |||||||||||||    
T  6126516 tgagtatgagagagaaagttgt-caaaaagttgtcagaatgtgaatgtacatatatcatttctct 6126453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7351647 - 7351715
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||||||| |||| |||||| |   || |||||  |||| ||||||||||||||||||||    
T  7351647 tgagtatgagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctctatttt 7351715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10206981 - 10207045
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||    
T  10206981 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctct 10207045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26279946 - 26279883
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||| |||||| ||| ||  |||| |||||||||||||||    
T  26279946 tgagtatgagagagaaagttgt-caaaaagttgtcagaaagtggttgtacaaatatcatttctct 26279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26996379 - 26996315
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| |||| || ||||||||||  |||||||||||||||    
T  26996379 tgagtatgagagagaaagttgttacaaaagttgttactaaatgaatgttcaaatatcatttctct 26996315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29573364 - 29573432
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctattt 68  Q
    |||||||||||||||||||||||  |||| |||| || |||||  |||| |||||||||||||| ||||    
T  29573364 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcaattt 29573432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 31206862 - 31206921
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttct 62  Q
    ||||||||| |||||||||| |||||| ||||||| |||||| |||| |||||||||||||    
T  31206862 agtatgagaaagaaagttgt-caaaaatttgtcacaaaatgattgtacaaatatcatttct 31206921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32931927 - 32931990
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| |||||||||||||||    
T  32931927 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattggttgtacaaatatcatttctct 32931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36671023 - 36671087
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    ||||||||||||| |||||||||  ||||||||| | |||||  |||  ||||||||||||||||    
T  36671023 tgagtatgagagaaaaagttgtcacaaaaattgtaaaaaatggttgttcaaatatcatttctcta 36671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36819018 - 36818955
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| |||||||||||||||    
T  36819018 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattggttgtacaaatatcatttctct 36818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44813196 - 44813132
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||| ||||  ||||||||| | ||||   ||| |||||||||||||||||    
T  44813196 tgagtatgagagagaaagctgtcacaaaaattgtaaaaaatagttgtttaaatatcatttctcta 44813132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 46852140 - 46852204
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  ||||  | ||| ||||| ||||  ||||||||||||||||    
T  46852140 tgagtatgagagagaaagttgtcacaaaagctatcataaatggatgttcaaatatcatttctcta 46852204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 47056535 - 47056563
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  47056535 tgagtatgagagagaaagttgtccaaaaa 47056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48405473 - 48405409
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| |||||  |||| |||||||||||||||    
T  48405473 tgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 51464281 - 51464348
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattt 68  Q
    ||||||||||||| |||||||| |||||| |||||||||| ||  |||| |||||||||||||| ||||    
T  51464281 tgagtatgagagataaagttgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctcaattt 51464348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 52727457 - 52727520
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||| ||||||||||||| ||||||||| ||| ||| ||| |||| |||||||||||||||    
T  52727457 tgagtatgtgagagaaagttgt-caaaaaattatcataaagtgattgtacaaatatcatttctct 52727520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54773762 - 54773826
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||    
T  54773762 tgagtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttctct 54773826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27401 - 27338
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||| | |||||||||||||    
T  27401 tgagtatgagagagaaagttgt-caaaaaattgtcacaaaatggatgtacatatatcatttctct 27338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34802 - 34862
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaa-tgtataaatatcattt 60  Q
    |||||||||||||||||||||||  |||||||||||||||| || |||| |||||||||||    
T  34802 tgagtatgagagagaaagttgtcataaaaattgtcacaaattaattgtacaaatatcattt 34862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4915681 - 4915745
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||||||||||| ||||| ||||  |||||||||||||||    
T  4915681 tgagtatgagagagaaagttgtcataaaaattgtcacaaaatggatgttcaaatatcatttctct 4915745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17475385 - 17475321
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||| ||||| || ||| |||||||||||  |||||||||||||||    
T  17475385 tgagtatgagagagaaagttgtcaaaaaagttatcaccaaatgaatgttcaaatatcatttctct 17475321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24235382 - 24235319
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | ||||||||||||||| ||| |||| |||||||||||||||    
T  24235382 tgagtatgagagagaaagttgtac-aaaaattgtcacaaattgattgtacaaatatcatttctct 24235319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38864744 - 38864808
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||| ||||| ||||||| |||| | |||| |||||||||||||||    
T  38864744 tgagtatgagagagaaagttgtcaaaaaagttgtcacaaaataattgtacaaatatcatttctct 38864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33860710 - 33860647
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||    
T  33860710 tgagtatgagagagaaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatttctc 33860647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38792898 - 38792960
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||| | |||||||| | ||| |||||||||||||||||||||||    
T  38792898 tgagtatgagagagaaagttgtc-ataaaattgttagaaaatgaatgtataaatatcatttctc 38792960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40693631 - 40693694
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaa-tgtataaatatcatttctc 63  Q
    |||||||||||||||| ||||||  ||||||||||| |||| || |||||||||||||||||||    
T  40693631 tgagtatgagagagaaggttgtctcaaaaattgtcaaaaattaattgtataaatatcatttctc 40693694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39344988 - 39345054
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||||   |||||||||||| ||||| ||||  |||||||||||||||||    
T  39344988 tgagtatgagagagaaagttgttgcaaaaattgtcacaaaatggatgttcaaatatcatttctctat 39345054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 336820 - 336877
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||  ||||||||||| |||| | |||| |||||||||||||    
T  336820 tatgagagagaaagttgtcacaaaaattgtcaaaaataattgtacaaatatcatttct 336877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40409175 - 40409239
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||| ||||||| ||||||||| |  ||||| ||||||||||||||||    
T  40409175 tgagtatgagagagaaagttgt-caaaaaactgtcacaaagtagatgtacaaatatcatttctcta 40409239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3223051 - 3222988
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||| |||| |||||||||||||||    
T  3223051 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattgattgtacaaatatcatttctct 3222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5932165 - 5932229
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| |||| ||||||||||||||||    
T  5932165 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgtttaaatatcatttctct 5932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 8026766 - 8026825
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||| | |||| |||||||||| ||| ||||||||||||||||||||    
T  8026766 tatgagagagaaagttgtac-aaaagttgtcacaaattgattgtataaatatcatttctct 8026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17363292 - 17363225
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattt 68  Q
    |||||||||||||||||||||| |||||| |||| | ||| ||| |||| |||||||||||||||||||    
T  17363292 tgagtatgagagagaaagttgt-caaaaagttgtaataaagtgattgtacaaatatcatttctctattt 17363225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31804338 - 31804405
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattt 68  Q
    ||||||||||||||||| || || |||||||| ||||||| ||| |||| |||||||||||||||||||    
T  31804338 tgagtatgagagagaaaattatc-aaaaaattatcacaaagtgattgtacaaatatcatttctctattt 31804405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37514140 - 37514204
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| |||| || ||||| ||||| |||||||||||||||    
T  37514140 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatggatgtacaaatatcatttctct 37514204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46566991 - 46566928
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| || ||||| |||||||||||||||    
T  46566991 tgagtatgagagagaaagttgt-ctaaaagttgtcacaaagtggatgtacaaatatcatttctct 46566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49768878 - 49768941
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| |||||||||||  | ||||| ||||| |||||||||||||||    
T  49768878 tgagtatgagagagaaagttgt-caaaaaattgttgcaaaatggatgtacaaatatcatttctct 49768941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51389378 - 51389315
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||| |||||||||||| ||||||||||| || |||||| |||| |||||||||||||||    
T  51389378 tgagtatgaaagagaaagttgt-caaaaaattgttactaaatgattgtacaaatatcatttctct 51389315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3078916 - 3078979
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||  |||| |||| || |||||| |||| ||||||||||||||    
T  3078916 tgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctc 3078979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4514274 - 4514340
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctctatt 67  Q
    |||||||||||||||||||||| ||||||||||| |  |||||  ||||||||||| |||||||||||    
T  4514274 tgagtatgagagagaaagttgt-caaaaaattgtaatgaaatggttgtataaatattatttctctatt 4514340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8681003 - 8680941
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcaca-aatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||||||||| | ||||| ||||  |||| ||||||||||||||    
T  8681003 tgagtatgagagagaaagttgtccaaaaaa-tatcacataatggttgtacaaatatcatttctc 8680941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10994161 - 10994227
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatt 67  Q
    ||||||||||||| |||||||| ||||| |||||||| |||||  |||| ||||||||||||||||||    
T  10994161 tgagtatgagagataaagttgt-caaaagattgtcacaaaatggttgtacaaatatcatttctctatt 10994227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21617246 - 21617183
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||   |||||||||||| ||||| ||||  ||||||||||||||    
T  21617246 tgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcatttctc 21617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31076117 - 31076050
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctctatt 67  Q
    |||||||||||||||||||||||| | || |||| | |||||| ||||  ||||||||||||||||||    
T  31076117 tgagtatgagagagaaagttgtcccagaagttgttaccaaatggatgttcaaatatcatttctctatt 31076050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44165971 - 44165909
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||| |||||||||||| |||| ||  |||| ||||||||||||||    
T  44165971 tgagtatgagagagaaagttgt-caaaaaattgtcgcaaagtggttgtacaaatatcatttctc 44165909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 47288144 - 47288081
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||  ||||||||| || |||||  |||| |||||||||||||||    
T  47288144 gagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctct 47288081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49194945 - 49194883
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||  |||| |||||||||||||||    
T  49194945 tgagtataagagagaaagttgtc-aaaagattgtcataaatggttgtacaaatatcatttctct 49194883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50890082 - 50890145
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  |||| |||||| ||||   |||| |||||||||||||||    
T  50890082 tgagtatgagagagaaagttgtcacaaaagttgtcaaaaatagttgtacaaatatcatttctct 50890145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52392234 - 52392296
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    ||||||||||||| |||||||| |||||| |||||||||| || ||||| ||||||||||||||    
T  52392234 tgagtatgagagataaagttgt-caaaaagttgtcacaaagtggatgtacaaatatcatttctc 52392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 55510921 - 55510859
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||| |||||| || ||||| |||||| |||||| |||| |||||||||||||||    
T  55510921 tgagtatgagagataaagttatctaaaaa-ttgtcataaatgattgtacaaatatcatttctct 55510859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24209796 - 24209861
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||| |||| | ||||||||||||||| ||   |||||||||||||||||||||    
T  24209796 tgagtatgagagagaaaattgt-ctaaaaattgtcacaaagtggtcgtataaatatcatttctctat 24209861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30079909 - 30079843
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||||    
T  30079909 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctat 30079843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40721973 - 40722035
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctc 63  Q
    ||||||||||||||||||||||||||||| |  |   ||||| ||||| ||||||||||||||    
T  40721973 tgagtatgagagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2268516 - 2268577
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttct 62  Q
    |||||||||||||||||||||||  |||| |||| | ||||| ||||  |||||||||||||    
T  2268516 tgagtatgagagagaaagttgtcacaaaagttgttaaaaatggatgttcaaatatcatttct 2268577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 3286878 - 3286817
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||| | ||||  |||| |||||||  |||| |||||||||||||||    
T  3286878 agtatgagagagaaagttgacaaaaatgttgttacaaatggttgtacaaatatcatttctct 3286817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4577619 - 4577551
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgt-cacaaatgaatgtataaatatcatttctctatttt 69  Q
    |||||||||||||||||||||| |||||| |||| |  |||||  |||| ||||||||||||||||||||    
T  4577619 tgagtatgagagagaaagttgtacaaaaa-ttgtacgaaaatggttgtacaaatatcatttctctatttt 4577551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 9032840 - 9032780
Alignment:
Q  3 agtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||| | |||| |||||||||| ||| |||| ||||||||||||||    
T  9032840 agtatgagagagaaagttgtac-aaaagttgtcacaaattgattgtacaaatatcatttctc 9032780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22893930 - 22893868
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgt-cacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||| ||||||||||||  |||||||||| || |||||| |||| |||||||||||||||    
T  22893930 tgagtatgaaagagaaagttgt--aaaaaattgtacaaaaatgattgtacaaatatcatttctct 22893868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22945598 - 22945536
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgt-cacaaatgaatgtataaatatcatttctct 64  Q
    ||||||||| ||||||||||||  |||||||||| || |||||| |||| |||||||||||||||    
T  22945598 tgagtatgaaagagaaagttgt--aaaaaattgtacaaaaatgattgtacaaatatcatttctct 22945536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29175289 - 29175224
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||| |||||||||  ||||||||| | |||||| |||  | |||||||||||||||    
T  29175289 tgagtatgagagaaaaagttgtcacaaaaattgtaaaaaatgattgttcatatatcatttctctat 29175224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34116549 - 34116613
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctcta 65  Q
    ||||||||||||||||| |||| |||||| |||||||||| ||  |||| ||||||||||||||||    
T  34116549 tgagtatgagagagaaaattgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctcta 34116613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41082381 - 41082316
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||||||||  |||| || ||| ||||| |||||  ||||||||||||||||    
T  41082381 tgagtatgagagagaaagttgtcataaaagttatcaccaaataaatgttcaaatatcatttctcta 41082316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51887726 - 51887657
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctatttt 69  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||| |||||    
T  51887726 tgagtatgagagagaaagttgtagcaaaagttgtcacaaaatggatgttcaaatatcatttctcaatttt 51887657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4896509 - 4896572
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||| ||||||||||||| |||||| |||||||||| ||  |||| |||||||||||||||    
T  4896509 tgagtatgcgagagaaagttgt-caaaaagttgtcacaaagtggttgtacaaatatcatttctct 4896572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5208336 - 5208399
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| | |||| |||||||||| ||  |||| |||||||||||||||    
T  5208336 tgagtatgagagagaaagttgtac-aaaagttgtcacaaattggttgtacaaatatcatttctct 5208399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6953397 - 6953460
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||||||||| ||||||||  ||||| |||||||||| || ||||| |||||||||||||||    
T  6953397 tgagtatgagagataaagttgt-taaaaagttgtcacaaagtggatgtacaaatatcatttctct 6953460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13086085 - 13086021
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| |||||||||   |||||||||||||||    
T  13086085 tgagtatgagagagaaagttgttacaaaagttgtcacaaaatgaatgatcaaatatcatttctct 13086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19233784 - 19233724
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaa-ttgtcacaaatgaatgtataaatatcattt 60  Q
    |||||||||| |||||||||||| |||||| || |||||||| | |||| |||||||||||    
T  19233784 tgagtatgagtgagaaagttgtcaaaaaaagttatcacaaataattgtacaaatatcattt 19233724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 19910874 - 19910846
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  19910874 tgagtatgagagagaaagttgtccaaaaa 19910846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22819712 - 22819648
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||    
T  22819712 tgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctct 22819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39158168 - 39158104
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtc-acaaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  ||||||| || | |||||| |||  |||||||||||||||    
T  39158168 tgagtatgagagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcatttctct 39158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43168723 - 43168786
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctct 64  Q
    ||||||||| ||||||||||| | ||||||||||||| |||||  |||| |||||||||||||||    
T  43168723 tgagtatgatagagaaagttg-caaaaaaattgtcacaaaatggttgtacaaatatcatttctct 43168786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44257738 - 44257802
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtca-caaatgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||||  ||||||||| |  |||||| || | |||||||||||||||    
T  44257738 tgagtatgagagagaaagttgtcacaaaaattgttagaaaatgattgcacaaatatcatttctct 44257802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44368211 - 44368274
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    ||||||| |||||||||||||| | |||| |||||||||| ||| |||| |||||||||||||||    
T  44368211 tgagtataagagagaaagttgtac-aaaagttgtcacaaattgattgtacaaatatcatttctct 44368274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 51107454 - 51107514
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||||| |||||| |   || |||||| |||| ||||||||||||||||    
T  51107454 tatgagagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctcta 51107514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51296198 - 51296261
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||| ||||||||||||| |||||| |||||| ||| ||| |||| |||||||||||||||    
T  51296198 tgagtatgtgagagaaagttgt-caaaaagttgtcataaagtgattgtacaaatatcatttctct 51296261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2513 - 2575
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcaca-aatgaatgtataaatatcatttctc 63  Q
    |||||||||||||||||||||||| ||||||| ||||| |||  ||||| ||||||||||||||    
T  2513 tgagtatgagagagaaagttgtcc-aaaaattatcacataatagatgtacaaatatcatttctc 2575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19699 - 19633
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcac-aaatgaatgtataaatatcatttctctat 66  Q
    ||||||||||||||||||||||   |||| ||||||| ||||| ||||  |||||||||||||||||    
T  19699 tgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctat 19633  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 9858 - 9921
Alignment:
Q  2 gagtatgagagagaaagttgtccaaaaaattgt-cacaaatgaatgtataaatatcatttctcta 65  Q
    |||||||||||||||| |||| |||||||||||  | |||||| |||| ||||||||||||||||    
T  9858 gagtatgagagagaaaattgt-caaaaaattgtgaaaaaatgattgtacaaatatcatttctcta 9921  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 3935 - 3999
Alignment:
Q  5 tatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctctattt 68  Q
    ||||||||||||| || ||  ||||||| ||||||| ||| |||||||||||||||| |||||||    
T  3935 tatgagagagaaaattatctcaaaaattatcacaaaatgattgtataaatatcatttttctattt 3999  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 199328 - 199265
Alignment:
Q  1 tgagtatgagagagaaagttgtccaaaaaattgtcacaaa-tgaatgtataaatatcatttctct 64  Q
    |||||||||||||||||||||| ||||||||||| | ||| ||  |||| |||||||||||||||    
T  199328 tgagtatgagagagaaagttgt-caaaaaattgtaataaagtggttgtacaaatatcatttctct 199265  T

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