View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19973_low_27 (Length: 382)
Name: NF19973_low_27
Description: NF19973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19973_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 25 - 365
Target Start/End: Original strand, 37122486 - 37122826
Alignment:
| Q |
25 |
tgaggaatcaaagaaagacactggatatttctctgccaagggaaatattcccattcttactaaaaagaatttattcaagtatattcaacaaaacatgtct |
124 |
Q |
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| T |
37122486 |
tgaggaatcaaagaaagacactggatatttctctgccaagggaaatattcccattcttactaaaaacaatttattcaagtatattcaacaaaacatgtct |
37122585 |
T |
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| Q |
125 |
gcgtaagacacatacccttcctctattttctaaccaattgaggtacagttagctacaacaataagttacaacctccttctcagtaagcatccatcaactg |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37122586 |
gcgtaagacacatacccttcctctattttctaaccaattgaggtacagttagctacaacaataagttacaacctccttctcagtaagcatccatcaactg |
37122685 |
T |
|
| Q |
225 |
acaattatccaaccaacttccttctagaatacacttcaagtttccgtacttcttgttcactagcaacatctccctctgtcaaaggaactttgtcttcaag |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37122686 |
acaattatccaaccaacttccttctagaatacacttcaagtttccgtacttcttgttcactagcaacatctccctctgtcaaaggaactttgtcttcaag |
37122785 |
T |
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| Q |
325 |
gttgtagtgagggatttggttttatattatcccaggttgct |
365 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
37122786 |
gttgtagtgagggatttggttttatattatcccaggttgct |
37122826 |
T |
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