View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19973_low_71 (Length: 215)
Name: NF19973_low_71
Description: NF19973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19973_low_71 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 27549535 - 27549704
Alignment:
| Q |
16 |
caattaataactcttttcgccagttacctaggcagtgtaatttgaactgtaagttattgactaatacttagatgaattagaacaattggcagacctaaaa |
115 |
Q |
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| T |
27549535 |
caattaagaactcttttcaccagttacctaggcagtgtaatttgaactgtaagttattgaccaatacttagatgaattagaacaattgacagacctaaaa |
27549634 |
T |
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| Q |
116 |
taatctctcctttctaattcctacatagttttcattagtttctgcattctgctatatttgtttctctatt |
185 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
27549635 |
taatctctcctttctaattcctatatagttttcattagtttctgcattctgttatatttgtttctctatt |
27549704 |
T |
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