View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19973_low_78 (Length: 204)
Name: NF19973_low_78
Description: NF19973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19973_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 39087444 - 39087273
Alignment:
| Q |
17 |
aaaatttgtaatatatctagtcttctgccttggtaaattattaatgtatatacatatatgtttatacaacaagttgtaaatgctactaatatagaatcaa |
116 |
Q |
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| T |
39087444 |
aaaaattgtaatatatctagtcttctgccttggtaaattattaatgtatatacatatatgtttatacaacaagttgtaaatgctactaatatagaatcaa |
39087345 |
T |
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| Q |
117 |
taaagcaattacatatatttttcatttggagacctttttccactgttttttggattccattgttgcacatgt |
188 |
Q |
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| T |
39087344 |
taaagcaattacatatatttttcatttggagacctttttacactgttttttggattccattgttgcacatgt |
39087273 |
T |
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