View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19974_high_17 (Length: 366)
Name: NF19974_high_17
Description: NF19974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19974_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 18 - 350
Target Start/End: Complemental strand, 10970411 - 10970079
Alignment:
| Q |
18 |
ttttgggcaaacatcatctcaattttcacaatttttgttagttttccgttttaaaaacatcaggcaagcatcatttcaaacgtttgaaacataatataaa |
117 |
Q |
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| T |
10970411 |
ttttgggcaaacatcatctcaattttcacaatttttgttagttttccgttttaaaaacatcaggcaagcatcatttcaaacgtttgaaacataatataaa |
10970312 |
T |
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| Q |
118 |
caatagagaatgtctcgctatcaatacttacaaacctacgagggaataacatactatttgtgatatcattctcccatccttttccaacctacagcatttt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
10970311 |
caatagagaatgtctcgctatcaatacttacaaacctacgagggaataacatactatttgtgatagcattctcccatccttttccaacctacagcatttt |
10970212 |
T |
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| Q |
218 |
tgttttgaagtggtgaaatagaaccagttacaaagataactgcaccctcgtcattctttccgcctaagggaagctccaacagcaatcgcttaagggatac |
317 |
Q |
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| T |
10970211 |
tgctttgaagcggtgaaatagaaccagttacaaagataactgcaccctcgtcattctttccgcctaagggaagctccaacagcaatcgcttaagggatac |
10970112 |
T |
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| Q |
318 |
acagtcacaatgagggtttgttatggtcgacta |
350 |
Q |
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|| ||||||||||||||||||||||||| |||| |
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| T |
10970111 |
accgtcacaatgagggtttgttatggtcaacta |
10970079 |
T |
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