View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19974_low_38 (Length: 246)
Name: NF19974_low_38
Description: NF19974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19974_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 1423115 - 1422903
Alignment:
| Q |
15 |
cacagataaacttaaacctaattagaaattttatacaaaaatgaagaatcgatgaacatgatagaaactggagaaatatgatagatagatagaataaaaa |
114 |
Q |
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| T |
1423115 |
cacagataaacttaaacctaattagaaattttatacaaaaatgaagaatcgatgaacatgatagaaactggagaaatatgatagatagatagaataaaaa |
1423016 |
T |
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| Q |
115 |
agaaagtataacagtggagaaaagcaaactcgagagaattatgggatgattttgtgatgttgaattggtcttcctatttctcacccaaaaaattaggtta |
214 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1423015 |
agaaagtataacagtggagaaaaggaaactcgagagaattatgggatgattttgtgatgttgaattggtcttcctatttctcacccaaaaaattaggtta |
1422916 |
T |
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| Q |
215 |
tattgttccttct |
227 |
Q |
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|||| |||||||| |
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| T |
1422915 |
tattattccttct |
1422903 |
T |
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