View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19975_high_7 (Length: 523)
Name: NF19975_high_7
Description: NF19975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19975_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 471; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 16 - 506
Target Start/End: Original strand, 41870610 - 41871100
Alignment:
| Q |
16 |
attgatgtaatacttaattatattatttcaaatttgactttaagtagtaatgacagtttctgttttaccaaaacaccctaagaaaactaatgcaccaacc |
115 |
Q |
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| T |
41870610 |
attgatgtaatacttaattatattattttaaatttgactttaagtagtaatgacagtttctgttttaccaaaacaccctaagaaaactaatgcaccaacc |
41870709 |
T |
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| Q |
116 |
ataattgcttggatgtggcatgccaacactttgtgaacagaaaactgaaagtatatcaagtgcaaaccatgaagaaatgaagaggaaaatcttcaaagta |
215 |
Q |
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| T |
41870710 |
ataattgcttgggtgtggcatgccaacactttgtgaacagaaaactgaaagtatatcaagtgcaaaccatgaagaaatgaagaggaaaatcttcaaagta |
41870809 |
T |
|
| Q |
216 |
cccaagtaaatatttgagagctctacacacgtgctccaagaatgacaacttcatcattcgagttggcaaactaagatgactagcataaggccaaactgac |
315 |
Q |
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| T |
41870810 |
cccaagtaaatatttgagagctctacacacgtgctccaagaatgacaacttcatcgttcgagttggcaaactaagatgactagcataaggccaaactgac |
41870909 |
T |
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| Q |
316 |
ctatgaagtgaaatgctatagaaaacattaattttaaaccaagggataaagtcggttttgaaatccaatgagtgtggctcagttggcaacatatgctaag |
415 |
Q |
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| T |
41870910 |
ctatgaagtgaaatgctatagaaaacattaattttaaaccaagggataaagtcggttttgaaatccaatgagtgtggctcagttggcaacatatgctaag |
41871009 |
T |
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| Q |
416 |
cttgtacgtgtgaggatcaattccacatatcacattcttggagagagacagaatgtgaactgcgactaagttcaaaatcaaggacagtttc |
506 |
Q |
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| T |
41871010 |
cttgtacatgagaggatcaattccacatatcacattcttggagagagacagaatgtgaactgcgactaagttcaaaatcaaggacagtttc |
41871100 |
T |
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