View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19975_low_1 (Length: 746)

Name: NF19975_low_1
Description: NF19975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19975_low_1
NF19975_low_1
[»] chr8 (1 HSPs)
chr8 (16-729)||(37685300-37686013)
[»] chr4 (7 HSPs)
chr4 (255-729)||(5800742-5801216)
chr4 (245-332)||(17712427-17712514)
chr4 (281-352)||(41290536-41290607)
chr4 (246-321)||(41449812-41449887)
chr4 (160-210)||(32037778-32037828)
chr4 (255-305)||(41450439-41450489)
chr4 (257-342)||(5801364-5801449)
[»] chr3 (1 HSPs)
chr3 (245-729)||(30865886-30866379)
[»] chr1 (3 HSPs)
chr1 (255-321)||(51608510-51608576)
chr1 (255-306)||(51609127-51609178)
chr1 (255-304)||(3919764-3919813)
[»] chr2 (1 HSPs)
chr2 (255-332)||(2343105-2343182)
[»] chr7 (10 HSPs)
chr7 (245-321)||(46135450-46135526)
chr7 (257-320)||(7012920-7012983)
chr7 (257-320)||(7028278-7028341)
chr7 (239-303)||(27420170-27420234)
chr7 (245-303)||(44607383-44607441)
chr7 (245-303)||(45086456-45086514)
chr7 (255-305)||(46136078-46136128)
chr7 (255-352)||(27420826-27420923)
chr7 (257-294)||(33577620-33577657)
chr7 (255-352)||(44608033-44608130)
[»] chr5 (2 HSPs)
chr5 (245-321)||(34406199-34406275)
chr5 (255-304)||(36495015-36495064)
[»] chr6 (2 HSPs)
chr6 (255-293)||(15435157-15435195)
chr6 (242-313)||(31684711-31684782)


Alignment Details
Target: chr8 (Bit Score: 658; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 658; E-Value: 0
Query Start/End: Original strand, 16 - 729
Target Start/End: Original strand, 37685300 - 37686013
Alignment:
Q  16 attgcgtgcataacacgatgaaaagtgcctaaggcacattatgtaagtattaccctttgttttatacctctcgtcaatcttaccatataaactgttgtgc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37685300 attgcgtgcataacacgatgaaaagtgcctaaggcacattatgtaagtattaccctttgttttatacctctcgtcaatcttaccatataaactgttgtgc 37685399  T
Q  116 tgacttctatttttacctatgagtttgatgggcatgcagaaatgtaaaatatttttacactaatattcaatgaaatatcaaaatacttccatatctcatt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37685400 tgacttctatttttacctatgagtttgatgggcatgcagaaatgtaaaatatttttacactaatattcaatgaaatatcaaaatacatccatatctcatt 37685499  T
Q  216 acaaacttctacctacccatacaaaattggggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtag 315  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  37685500 acaaacttctacctacccatacaaaattggggagcccctaatatggacctctacttttaaggtccacccagggtccttgctaattgacctactatagtag 37685599  T
Q  316 gtagattctgtaccttttcaatttaaaccgtacaaattgagaacaacaaagtaacgatgatgaaaagttaattccataattcatatcaactaccatggaa 415  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37685600 gtagattctgtaccttttcaatttaaaccgtacaaattgagaaaaacaaagtaacgttgatgaaaagttaattccataattcatgtcaactaccatggaa 37685699  T
Q  416 tcaaaaaacaaattaatcatccaattcgcaatccgcttttcgttaccataacttcaattccatcattcataggttgatgaaacacagcagcaacaataaa 515  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37685700 tcaaaaaacgaattaatcatccaatttgcaatccgctttttgttaccataacttcaattccatcattcataggttgatgaaacacaacagcaacaataaa 37685799  T
Q  516 caatgaatcacaatttgagaacacaatgatgacaaaagtgttcgttgaagatcttgcctccgaaagacactgataaactatctgctttcagtttcattaa 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37685800 caatgaatcacaatttgagaacacaatgatgacaaaagtgttcgttgaagatcttgcctccgaaagacactgataaactatctgctttcagtttcattaa 37685899  T
Q  616 agacacaaacttctatatttgcgtcaagtcattgcagtttgtattcccccaaatcattccttctacctaaccaaggcacactccatgcttggagttggaa 715  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37685900 agacgcaaacttctatatttgcgtcaagtcattgcaatttgtattcccccaaatcattccttctacctaaccaaggcacactccatgcttggagttggaa 37685999  T
Q  716 acaagaacaccaac 729  Q
    ||||||||||||||    
T  37686000 acaagaacaccaac 37686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 431; Significance: 0; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 255 - 729
Target Start/End: Original strand, 5800742 - 5801216
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaaccgtacaaattg 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5800742 aatatggacctctacttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaaatgtacaaattg 5800841  T
Q  355 agaacaacaaagtaacgatgatgaaaagttaattccataattcatatcaactaccatggaatcaaaaaacaaattaatcatccaattcgcaatccgcttt 454  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  5800842 agaaaaacaaagtaacgttgatgaaaagttaattccataattcatatcaactaccatggaatcaaaaaacgaattaatcatccaattcgcaatccacttt 5800941  T
Q  455 tcgttaccataacttcaattccatcattcataggttgatgaaacacagcagcaacaataaacaatgaatcacaatttgagaacacaatgatgacaaaagt 554  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5800942 ttgttaccataacttcaattccatcattcataggttgatgaaacacagcagcaacaataaacaatgaattacaatttgagaacacaatgatgacaaaagt 5801041  T
Q  555 gttcgttgaagatcttgcctccgaaagacactgataaactatctgctttcagtttcattaaagacacaaacttctatatttgcgtcaagtcattgcagtt 654  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5801042 gttcgttgaagatcttgcctctgaaagacactgataaactatctgctttcagtttcattaaagacacaaacttctatatttgcgtcaagtcattgcaatt 5801141  T
Q  655 tgtattcccccaaatcattccttctacctaaccaaggcacactccatgcttggagttggaaacaagaacaccaac 729  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5801142 tgtattcccccaaatcattccttctacctaaccaaggcacactccatgcttggagttggaaacaagaacaccaac 5801216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 332
Target Start/End: Complemental strand, 17712514 - 17712427
Alignment:
Q  245 gggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttt 332  Q
    ||||||| | ||||||||||||| || ||| |||||||||||||||||| ||||||||||||| ||| |||||||||| ||| |||||    
T  17712514 gggagcccctaatatggacctcttttattatggtccacccatggtccttcctaattgacctacaataataggtagattttgttccttt 17712427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 41290536 - 41290607
Alignment:
Q  281 acccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaaccgtacaaat 352  Q
    ||||||||||||| |||||||||| || |||||||||||||| |   ||||| || |||| |||||||||||    
T  41290536 acccatggtccttactaattgaccgacaatagtaggtagattgtagtcctttccagtttacaccgtacaaat 41290607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 41449812 - 41449887
Alignment:
Q  246 ggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagat 321  Q
    |||||| | ||||||||||||| | ||||||||||||||||||||||   ||| |||||||| ||| | |||||||    
T  41449812 ggagcccctaatatggacctctttctttaaggtccacccatggtcctaagtaaatgacctacaataatgggtagat 41449887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 32037778 - 32037828
Alignment:
Q  160 taaaatatttttacactaatattcaatgaaatatcaaaatacttccatatc 210  Q
    ||||||||||||||||| ||||| ||||| | |||| ||||||||||||||    
T  32037778 taaaatatttttacactgatatttaatgagagatcacaatacttccatatc 32037828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 41450489 - 41450439
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacct 305  Q
    ||||||||||||| | |||||||| ||| ||||||||||||||| ||||||    
T  41450489 aatatggacctctttctttaaggttcactcatggtccttgctaaatgacct 41450439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 5801449 - 5801364
Alignment:
Q  257 tatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaa 342  Q
    ||||||||||| ||||||  |||||||||||||||||  |||||||||  |||||| | ||  ||| ||| ||||| |||||||||    
T  5801449 tatggacctctttttttagagtccacccatggtccttagtaattgaccggctatagcaagtttattttgttcctttccaatttaaa 5801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 245 - 729
Target Start/End: Original strand, 30865886 - 30866379
Alignment:
Q  245 gggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaacc 344  Q
    ||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30865886 gggagcccctaatatgaacctctacttttaaggtccacccatggtccttgctaattgacctactataataggtagattctgtaccttttcaatttaaacc 30865985  T
Q  345 gtacaaattgagaacaacaaagtaacgatgatgaaaagttaattccataa---------ttcatatcaactaccatggaatcaaaaaacaaattaatcat 435  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  30865986 gtacaaattgagaaaaacaaagtaacgttgatgaaaagttaattccataattcatataattcatatcaactaccatggaatcaaaaaacaaattaatcat 30866085  T
Q  436 ccaattcgcaatccgcttttcgttaccataacttcaattccatcattcataggttgatgaaacacagcagcaacaataaacaatgaatcacaatttgaga 535  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30866086 ccaattcgcaatccgctttttgttaccataacttcaattccatcattcataggttgatgaaacacagcagcaacaataaacaatgaatcgcaatttgaga 30866185  T
Q  536 acacaatgatgacaaaagtgttcgttgaagatcttgcctccgaaagacactgataaactatctgctttcagtttcattaaagacacaaacttctatattt 635  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30866186 acacaatgataacaaaagtgttcgttgaagatcttacctccgaaagacactgataaactatctgctttcagtttcattaaagacacaaacttctatattt 30866285  T
Q  636 gcgtcaagtcattgcagtttgtattcccccaaatcattccttctacctaaccaaggcacactccatgcttggagttggaaacaagaacaccaac 729  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30866286 gcatcaagtcattgcaatttgtattcccccaaatcattccttctacctaaccaaggcacactccatgcttggagttggaaacaagaacaccaac 30866379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 51608510 - 51608576
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagat 321  Q
    ||||||||||||| | |||||||||||||||||||||| | ||| |||||||| ||||| |||||||    
T  51608510 aatatggacctctttctttaaggtccacccatggtcctaggtaaatgacctacaatagtgggtagat 51608576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 51609178 - 51609127
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgaccta 306  Q
    ||||||||||||| | |||||||| ||| ||||||||||||||| |||||||    
T  51609178 aatatggacctctttctttaaggttcactcatggtccttgctaaatgaccta 51609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 3919764 - 3919813
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacc 304  Q
    |||||||||| ||  ||||||||||||| ||||||||||| |||||||||    
T  3919764 aatatggaccccttattttaaggtccactcatggtccttgttaattgacc 3919813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 2343182 - 2343105
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttt 332  Q
    ||||||||||||| || ||| |||||| ||||| |||||||||||| |||||| ||| |||||||||| ||| |||||    
T  2343182 aatatggacctcttttattatggtccatccatgatccttgctaattcacctacaataataggtagattttgttccttt 2343105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 46135450 - 46135526
Alignment:
Q  245 gggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagat 321  Q
    ||||||| | ||||||||||||| | |||||||||||||||||||||| | ||| |||||||| ||| | |||||||    
T  46135450 gggagcccctaatatggacctctttctttaaggtccacccatggtcctaggtaaatgacctacaataatgggtagat 46135526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 7012983 - 7012920
Alignment:
Q  257 tatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtaga 320  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||||  ||||| ||||||    
T  7012983 tatggacctctttctttaaggttcacccatggtccttgctaaatgacctataatagtgggtaga 7012920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 7028341 - 7028278
Alignment:
Q  257 tatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtaga 320  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||||  ||||| ||||||    
T  7028341 tatggacctctttctttaaggttcacccatggtccttgctaaatgacctataatagtgggtaga 7028278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 27420170 - 27420234
Alignment:
Q  239 aaattggggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgac 303  Q
    ||||| ||||||| | ||||||||||||| || ||||||||| | ||||||||||||| ||||||    
T  27420170 aaattagggagcccctaatatggacctcttttattaaggtccgctcatggtccttgctgattgac 27420234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 44607383 - 44607441
Alignment:
Q  245 gggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgac 303  Q
    ||||||| | ||||||||||||| || ||||||||| | ||||||||||||| ||||||    
T  44607383 gggagcccctaatatggacctcttttattaaggtccgctcatggtccttgctgattgac 44607441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 45086514 - 45086456
Alignment:
Q  245 gggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgac 303  Q
    ||||||| | ||||||||||  | |||||| ||||||||||||||||||||||| ||||    
T  45086514 gggagcccctaatatggacccttttttttagggtccacccatggtccttgctaaatgac 45086456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 46136128 - 46136078
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacct 305  Q
    ||||||||||||| | |||||||| ||| ||||||||||||||| ||||||    
T  46136128 aatatggacctctttctttaaggttcactcatggtccttgctaaatgacct 46136078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 27420923 - 27420826
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaaccgtacaaat 352  Q
    ||||||||||||| || ||| |||||||||||||||| | |||||| |||  | ||||||||||| || | | ||||| || |||| ||| |||||||    
T  27420923 aatatggacctcttttattatggtccacccatggtccatactaattaaccggcaatagtaggtagtttttattcctttccattttacaccatacaaat 27420826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 33577657 - 33577620
Alignment:
Q  257 tatggacctctatttttaaggtccacccatggtccttg 294  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  33577657 tatggacctctttttttagggtccacccatggtccttg 33577620  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 44608130 - 44608033
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagattctgtaccttttcaatttaaaccgtacaaat 352  Q
    ||||||||||||| || ||| |||||||||||||||| | |||||| |||  | ||||||||||| || | | ||||| || |||| ||| |||||||    
T  44608130 aatatggacctcttttattatggtccacccatggtccatactaattaaccggcaatagtaggtagtttttattcctttccattttacaccatacaaat 44608033  T

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Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 34406199 - 34406275
Alignment:
Q  245 gggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagtaggtagat 321  Q
    ||||||| | ||||||||||||| | |||||||| ||||||||||||| | ||| |||||||| ||||| |||||||    
T  34406199 gggagcccctaatatggacctctttctttaaggttcacccatggtcctaggtaaatgacctacaatagtgggtagat 34406275  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 36495015 - 36495064
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtccttgctaattgacc 304  Q
    |||||||||| ||  ||||||||||||| ||||||||||| |||||||||    
T  36495015 aatatggaccccttattttaaggtccactcatggtccttgttaattgacc 36495064  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 15435157 - 15435195
Alignment:
Q  255 aatatggacctctatttttaaggtccacccatggtcctt 293  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  15435157 aatatggacctctttttttaaggtccacccatggtcctt 15435195  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 31684782 - 31684711
Alignment:
Q  242 ttggggagcctccaatatggacctctatttttaaggtccacccatggtccttgctaattgacctactatagt 313  Q
    |||| ||||| | |||||||||| || |||| |||| |||||||||||||||||||| ||||| || |||||    
T  31684782 ttggagagcccctaatatggaccacttttttcaaggaccacccatggtccttgctaaatgaccaacaatagt 31684711  T

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