View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19975_low_11 (Length: 495)

Name: NF19975_low_11
Description: NF19975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19975_low_11
NF19975_low_11
[»] chr8 (45 HSPs)
chr8 (17-140)||(32931110-32931231)
chr8 (17-140)||(35362661-35362783)
chr8 (21-128)||(35914624-35914730)
chr8 (36-140)||(44699634-44699737)
chr8 (24-140)||(490491-490606)
chr8 (21-140)||(45041327-45041444)
chr8 (21-120)||(14459048-14459146)
chr8 (21-140)||(29520802-29520920)
chr8 (82-140)||(1928598-1928656)
chr8 (76-130)||(27556323-27556377)
chr8 (25-118)||(41971823-41971915)
chr8 (21-140)||(45419388-45419506)
chr8 (52-140)||(11523734-11523822)
chr8 (21-113)||(17491692-17491783)
chr8 (52-140)||(44529408-44529496)
chr8 (52-139)||(12491150-12491237)
chr8 (52-138)||(36565254-36565340)
chr8 (82-127)||(2518422-2518467)
chr8 (21-130)||(14903714-14903822)
chr8 (67-140)||(21121344-21121416)
chr8 (52-129)||(21425229-21425306)
chr8 (76-140)||(1313771-1313835)
chr8 (52-140)||(18742034-18742122)
chr8 (52-140)||(18746998-18747086)
chr8 (21-140)||(30559846-30559969)
chr8 (52-140)||(36545332-36545420)
chr8 (52-140)||(42469738-42469826)
chr8 (52-140)||(44047543-44047631)
chr8 (101-140)||(6483527-6483566)
chr8 (56-131)||(16035747-16035822)
chr8 (65-140)||(41031431-41031506)
chr8 (65-140)||(41031537-41031612)
chr8 (82-140)||(14742093-14742151)
chr8 (66-140)||(25473414-25473488)
chr8 (21-127)||(29700429-29700534)
chr8 (66-140)||(36143538-36143612)
chr8 (52-118)||(43904698-43904764)
chr8 (87-140)||(45512455-45512508)
chr8 (52-128)||(8932886-8932962)
chr8 (52-140)||(18737149-18737237)
chr8 (52-140)||(25300282-25300370)
chr8 (21-73)||(28169545-28169596)
chr8 (84-140)||(30689950-30690006)
chr8 (76-128)||(35646953-35647005)
chr8 (96-140)||(40982907-40982951)
[»] chr2 (51 HSPs)
chr2 (18-140)||(3481304-3481425)
chr2 (21-140)||(18959064-18959182)
chr2 (17-138)||(43751960-43752080)
chr2 (21-140)||(33504376-33504495)
chr2 (21-138)||(37470146-37470262)
chr2 (21-140)||(9496019-9496137)
chr2 (52-140)||(31959704-31959792)
chr2 (37-140)||(32364932-32365034)
chr2 (30-140)||(6219127-6219236)
chr2 (66-140)||(9531611-9531685)
chr2 (22-140)||(12141698-12141815)
chr2 (23-113)||(19336931-19337020)
chr2 (52-140)||(227372-227460)
chr2 (76-140)||(3720426-3720490)
chr2 (21-140)||(33287574-33287692)
chr2 (21-140)||(38435105-38435223)
chr2 (82-140)||(11992119-11992177)
chr2 (82-140)||(21281474-21281532)
chr2 (75-140)||(451659-451724)
chr2 (82-131)||(887085-887134)
chr2 (75-140)||(12474938-12475003)
chr2 (67-140)||(12520073-12520146)
chr2 (67-140)||(19863432-19863505)
chr2 (67-140)||(19867764-19867837)
chr2 (67-140)||(19872665-19872738)
chr2 (83-140)||(43573141-43573198)
chr2 (52-140)||(3635334-3635422)
chr2 (52-140)||(3866255-3866343)
chr2 (52-140)||(7326171-7326259)
chr2 (52-140)||(12734883-12734971)
chr2 (76-140)||(17429257-17429321)
chr2 (52-140)||(25834861-25834949)
chr2 (52-140)||(28508861-28508949)
chr2 (76-140)||(30306239-30306303)
chr2 (76-140)||(34931639-34931703)
chr2 (25-128)||(45077884-45077988)
chr2 (21-140)||(45543084-45543201)
chr2 (21-140)||(12882056-12882174)
chr2 (77-140)||(38328381-38328444)
chr2 (82-140)||(4807808-4807866)
chr2 (82-140)||(17670681-17670739)
chr2 (84-130)||(32443851-32443897)
chr2 (66-140)||(39709212-39709286)
chr2 (87-140)||(10516760-10516813)
chr2 (82-139)||(13443920-13443977)
chr2 (52-129)||(36366819-36366896)
chr2 (84-140)||(440931-440987)
chr2 (52-140)||(2610771-2610859)
chr2 (84-140)||(3030894-3030949)
chr2 (52-140)||(35643131-35643219)
chr2 (52-140)||(38430067-38430155)
[»] chr3 (53 HSPs)
chr3 (17-140)||(42510027-42510149)
chr3 (21-140)||(45289102-45289220)
chr3 (21-140)||(54128532-54128650)
chr3 (21-140)||(19676092-19676210)
chr3 (52-121)||(49841799-49841868)
chr3 (52-140)||(48508418-48508506)
chr3 (25-140)||(19758044-19758157)
chr3 (29-140)||(40116349-40116459)
chr3 (82-140)||(52927859-52927917)
chr3 (23-112)||(23534609-23534697)
chr3 (31-128)||(40991594-40991690)
chr3 (28-140)||(29601052-29601163)
chr3 (76-140)||(48734158-48734222)
chr3 (25-140)||(19737141-19737254)
chr3 (39-136)||(49888361-49888454)
chr3 (21-140)||(50960648-50960766)
chr3 (21-139)||(34844585-34844702)
chr3 (86-140)||(40672378-40672432)
chr3 (82-140)||(45374488-45374546)
chr3 (67-140)||(45486860-45486933)
chr3 (52-140)||(12096716-12096804)
chr3 (52-140)||(40106631-40106719)
chr3 (76-140)||(46148235-46148299)
chr3 (21-140)||(49042089-49042208)
chr3 (21-140)||(54364987-54365104)
chr3 (82-140)||(24541343-24541401)
chr3 (82-140)||(24778620-24778678)
chr3 (21-99)||(40116520-40116597)
chr3 (52-138)||(52156097-52156183)
chr3 (67-140)||(20208196-20208269)
chr3 (83-140)||(41529975-41530032)
chr3 (52-140)||(5169015-5169103)
chr3 (52-140)||(14415271-14415358)
chr3 (56-128)||(32170592-32170664)
chr3 (25-121)||(36304123-36304218)
chr3 (52-140)||(47555343-47555431)
chr3 (52-140)||(52138983-52139071)
chr3 (21-140)||(15296060-15296178)
chr3 (52-131)||(38060897-38060976)
chr3 (66-140)||(7895891-7895965)
chr3 (82-140)||(35420482-35420539)
chr3 (66-140)||(39208805-39208879)
chr3 (82-136)||(40273220-40273274)
chr3 (101-138)||(7446277-7446314)
chr3 (101-138)||(7454419-7454456)
chr3 (83-140)||(37083303-37083360)
chr3 (21-105)||(41482183-41482267)
chr3 (87-140)||(49503579-49503632)
chr3 (87-140)||(52882673-52882726)
chr3 (76-140)||(659732-659796)
chr3 (76-140)||(49045042-49045106)
chr3 (52-140)||(51447728-51447816)
chr3 (52-140)||(53262324-53262412)
[»] chr1 (65 HSPs)
chr1 (21-140)||(52532627-52532745)
chr1 (23-140)||(7133313-7133429)
chr1 (15-140)||(50846709-50846833)
chr1 (30-140)||(27072498-27072607)
chr1 (37-140)||(2544762-2544864)
chr1 (21-140)||(8796362-8796480)
chr1 (17-140)||(36339815-36339936)
chr1 (21-140)||(41560382-41560500)
chr1 (25-140)||(35828573-35828687)
chr1 (21-131)||(28511821-28511930)
chr1 (21-134)||(1661572-1661684)
chr1 (26-131)||(43375618-43375722)
chr1 (76-140)||(17269000-17269064)
chr1 (52-140)||(25715337-25715425)
chr1 (76-132)||(37294127-37294183)
chr1 (21-130)||(8676883-8676994)
chr1 (66-140)||(22175342-22175416)
chr1 (66-140)||(28090705-28090779)
chr1 (82-140)||(37462887-37462945)
chr1 (21-138)||(32404539-32404655)
chr1 (52-140)||(1210928-1211016)
chr1 (52-140)||(19908046-19908134)
chr1 (52-140)||(25979242-25979330)
chr1 (21-140)||(29128936-29129055)
chr1 (52-140)||(30202141-30202229)
chr1 (52-140)||(37311766-37311854)
chr1 (52-140)||(40568421-40568509)
chr1 (76-140)||(44941787-44941851)
chr1 (52-140)||(49347404-49347492)
chr1 (21-136)||(9599409-9599523)
chr1 (75-134)||(27704156-27704215)
chr1 (21-140)||(52561600-52561718)
chr1 (28-111)||(52900682-52900764)
chr1 (82-140)||(21769722-21769780)
chr1 (66-140)||(42337753-42337827)
chr1 (66-139)||(1290043-1290116)
chr1 (75-140)||(29577458-29577523)
chr1 (75-140)||(32112000-32112065)
chr1 (87-140)||(41165500-41165553)
chr1 (76-140)||(2429640-2429704)
chr1 (52-139)||(32082768-32082856)
chr1 (76-140)||(38869089-38869153)
chr1 (28-140)||(48801625-48801734)
chr1 (52-140)||(51602239-51602327)
chr1 (21-140)||(3818867-3818985)
chr1 (101-140)||(4318856-4318895)
chr1 (53-140)||(31274412-31274499)
chr1 (82-140)||(4415562-4415620)
chr1 (82-140)||(38877354-38877412)
chr1 (82-140)||(39140728-39140786)
chr1 (52-130)||(40416554-40416632)
chr1 (66-140)||(44751681-44751755)
chr1 (66-140)||(52921277-52921351)
chr1 (83-140)||(2914134-2914191)
chr1 (66-139)||(50257767-50257840)
chr1 (52-140)||(4001466-4001554)
chr1 (52-140)||(6084158-6084246)
chr1 (52-140)||(9592917-9593005)
chr1 (52-140)||(22090279-22090367)
chr1 (52-140)||(34444539-34444627)
chr1 (52-140)||(34792360-34792448)
chr1 (52-140)||(39318312-39318399)
chr1 (96-140)||(42539223-42539267)
chr1 (96-140)||(43481809-43481853)
chr1 (52-140)||(48431410-48431498)
[»] chr6 (22 HSPs)
chr6 (21-139)||(8364709-8364826)
chr6 (52-140)||(34516-34604)
chr6 (21-140)||(31818684-31818802)
chr6 (82-140)||(12133913-12133971)
chr6 (52-140)||(30031439-30031527)
chr6 (66-140)||(12890772-12890846)
chr6 (21-140)||(9593721-9593837)
chr6 (52-140)||(9706953-9707041)
chr6 (76-140)||(21089604-21089668)
chr6 (52-140)||(34934841-34934929)
chr6 (21-136)||(5095987-5096101)
chr6 (21-131)||(655414-655523)
chr6 (62-112)||(1911573-1911623)
chr6 (52-140)||(28085559-28085647)
chr6 (52-140)||(31819014-31819102)
chr6 (82-140)||(1008063-1008120)
chr6 (52-118)||(3210541-3210607)
chr6 (26-140)||(5897615-5897728)
chr6 (65-131)||(7513010-7513076)
chr6 (23-140)||(6293403-6293519)
chr6 (52-140)||(34143776-34143864)
chr6 (52-140)||(34156392-34156480)
[»] chr5 (43 HSPs)
chr5 (17-140)||(79662-79784)
chr5 (17-133)||(6788216-6788331)
chr5 (53-136)||(38830504-38830586)
chr5 (21-139)||(9235200-9235316)
chr5 (22-94)||(43035135-43035206)
chr5 (21-140)||(6859534-6859652)
chr5 (66-140)||(5558338-5558412)
chr5 (52-140)||(4496567-4496655)
chr5 (21-140)||(11675682-11675801)
chr5 (21-116)||(6889146-6889240)
chr5 (26-140)||(418045-418158)
chr5 (66-140)||(18855804-18855878)
chr5 (75-140)||(20456979-20457044)
chr5 (52-140)||(29816565-29816653)
chr5 (52-140)||(30213758-30213846)
chr5 (76-140)||(38132543-38132607)
chr5 (52-140)||(38685150-38685238)
chr5 (82-138)||(42272690-42272746)
chr5 (21-127)||(28035-28140)
chr5 (83-137)||(27386554-27386608)
chr5 (82-140)||(28985296-28985354)
chr5 (75-140)||(42576216-42576281)
chr5 (36-137)||(43557847-43557947)
chr5 (76-140)||(2915507-2915571)
chr5 (84-140)||(7359272-7359328)
chr5 (52-140)||(10639485-10639573)
chr5 (76-140)||(11069173-11069237)
chr5 (52-140)||(12492395-12492483)
chr5 (52-140)||(28976870-28976958)
chr5 (21-113)||(29922437-29922528)
chr5 (85-140)||(9234102-9234157)
chr5 (52-131)||(30588630-30588709)
chr5 (85-128)||(41108752-41108795)
chr5 (82-140)||(12534425-12534483)
chr5 (82-140)||(13561397-13561455)
chr5 (82-140)||(27800041-27800099)
chr5 (82-131)||(32442145-32442194)
chr5 (76-137)||(41200360-41200421)
chr5 (83-140)||(43423506-43423563)
chr5 (52-140)||(1287590-1287678)
chr5 (52-140)||(3302027-3302115)
chr5 (81-140)||(8081974-8082034)
chr5 (52-140)||(14667954-14668042)
[»] scaffold0010 (1 HSPs)
scaffold0010 (21-140)||(160335-160453)
[»] chr7 (51 HSPs)
chr7 (21-140)||(38135224-38135342)
chr7 (21-139)||(28627945-28628062)
chr7 (21-129)||(40391845-40391952)
chr7 (25-140)||(2882747-2882861)
chr7 (21-139)||(9210716-9210833)
chr7 (25-111)||(26741934-26742019)
chr7 (21-135)||(47796168-47796281)
chr7 (25-140)||(27893574-27893688)
chr7 (21-140)||(40979939-40980057)
chr7 (52-140)||(2885733-2885821)
chr7 (52-140)||(31681031-31681119)
chr7 (52-140)||(34341406-34341494)
chr7 (52-140)||(36101788-36101876)
chr7 (21-139)||(14057631-14057748)
chr7 (21-139)||(14367659-14367776)
chr7 (87-140)||(6263477-6263530)
chr7 (52-140)||(11594143-11594231)
chr7 (25-140)||(28541954-28542069)
chr7 (84-140)||(28708596-28708652)
chr7 (52-140)||(34869603-34869691)
chr7 (52-140)||(35906212-35906300)
chr7 (52-140)||(47852270-47852358)
chr7 (21-139)||(42187594-42187711)
chr7 (52-139)||(42969881-42969968)
chr7 (66-140)||(28208339-28208413)
chr7 (66-140)||(39906383-39906457)
chr7 (52-138)||(45836495-45836581)
chr7 (75-140)||(6375074-6375139)
chr7 (52-140)||(7273283-7273371)
chr7 (76-140)||(12841286-12841350)
chr7 (52-140)||(21078100-21078188)
chr7 (52-140)||(27648963-27649051)
chr7 (76-140)||(30814136-30814200)
chr7 (76-140)||(31682613-31682677)
chr7 (21-113)||(36239834-36239925)
chr7 (66-138)||(36652189-36652261)
chr7 (52-140)||(43281857-43281945)
chr7 (52-140)||(46355867-46355955)
chr7 (21-140)||(40149024-40149141)
chr7 (101-140)||(40630666-40630705)
chr7 (21-140)||(45601629-45601747)
chr7 (82-140)||(1011259-1011317)
chr7 (66-140)||(37618142-37618216)
chr7 (82-140)||(47652760-47652818)
chr7 (82-131)||(27021745-27021794)
chr7 (76-140)||(4604754-4604818)
chr7 (88-140)||(5418293-5418345)
chr7 (96-140)||(20158682-20158726)
chr7 (65-140)||(33732030-33732103)
chr7 (52-140)||(34035165-34035253)
chr7 (101-129)||(45841018-45841046)
[»] chr4 (58 HSPs)
chr4 (17-139)||(56439583-56439704)
chr4 (17-88)||(21945701-21945771)
chr4 (25-140)||(53540447-53540561)
chr4 (29-140)||(55007907-55008017)
chr4 (55-140)||(29398990-29399075)
chr4 (21-140)||(13805276-13805394)
chr4 (26-140)||(25574982-25575095)
chr4 (52-140)||(23906308-23906396)
chr4 (52-140)||(51438628-51438716)
chr4 (21-136)||(26037520-26037634)
chr4 (21-128)||(31043225-31043331)
chr4 (66-140)||(436426-436500)
chr4 (21-111)||(30621241-30621330)
chr4 (82-140)||(39100547-39100605)
chr4 (64-140)||(12443290-12443366)
chr4 (52-140)||(31959825-31959913)
chr4 (76-140)||(35690478-35690542)
chr4 (52-140)||(48174104-48174192)
chr4 (52-140)||(52569526-52569614)
chr4 (52-139)||(4441036-4441123)
chr4 (21-140)||(13296586-13296704)
chr4 (25-140)||(31459151-31459265)
chr4 (77-140)||(36255533-36255596)
chr4 (22-140)||(26024861-26024978)
chr4 (82-140)||(51176787-51176845)
chr4 (87-140)||(15665319-15665372)
chr4 (52-140)||(1777028-1777116)
chr4 (52-140)||(5306479-5306567)
chr4 (84-136)||(15661887-15661939)
chr4 (52-140)||(19154874-19154962)
chr4 (53-113)||(20105556-20105616)
chr4 (82-134)||(28467651-28467703)
chr4 (52-140)||(32479221-32479309)
chr4 (76-140)||(45209216-45209280)
chr4 (28-140)||(55388222-55388333)
chr4 (57-140)||(1095633-1095716)
chr4 (69-140)||(19061946-19062017)
chr4 (21-140)||(37488244-37488362)
chr4 (21-140)||(45204851-45204968)
chr4 (24-106)||(20863795-20863876)
chr4 (82-140)||(27450191-27450249)
chr4 (90-140)||(30634117-30634167)
chr4 (66-140)||(48622554-48622628)
chr4 (25-131)||(53518344-53518448)
chr4 (52-137)||(34379586-34379670)
chr4 (52-129)||(50967050-50967127)
chr4 (21-140)||(2557682-2557801)
chr4 (96-140)||(7947164-7947208)
chr4 (52-140)||(12494846-12494934)
chr4 (83-139)||(21359237-21359293)
chr4 (52-140)||(21528471-21528559)
chr4 (88-140)||(26275027-26275079)
chr4 (84-140)||(34585697-34585753)
chr4 (52-140)||(39708616-39708704)
chr4 (88-140)||(46715278-46715330)
chr4 (76-140)||(49738561-49738625)
chr4 (82-138)||(49939747-49939803)
chr4 (96-140)||(50862858-50862902)
[»] scaffold0570 (1 HSPs)
scaffold0570 (52-140)||(959-1047)
[»] scaffold0392 (1 HSPs)
scaffold0392 (65-140)||(6783-6858)
[»] scaffold0050 (2 HSPs)
scaffold0050 (21-139)||(58238-58355)
scaffold0050 (17-118)||(45477-45577)
[»] scaffold1318 (1 HSPs)
scaffold1318 (52-140)||(514-602)
[»] scaffold0168 (1 HSPs)
scaffold0168 (66-140)||(28900-28974)
[»] scaffold0245 (1 HSPs)
scaffold0245 (66-139)||(16448-16521)
[»] scaffold0491 (1 HSPs)
scaffold0491 (52-140)||(3839-3927)
[»] scaffold0024 (1 HSPs)
scaffold0024 (66-127)||(48140-48201)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-73)||(43540-43588)
[»] scaffold0157 (1 HSPs)
scaffold0157 (52-140)||(25543-25631)


Alignment Details
Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 32931110 - 32931231
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| |||||| |||||||||||||||||| ||||||||||||| ||    
T  32931110 tatcagagaaactattaggaaagattttgaaattaa-tgagttggac-gaaatatggtgtatgatagaacattatggcataatttgatccatgtagccga 32931207  T
Q  117 ccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| ||||    
T  32931208 ccccacttagtgggaaaagccttg 32931231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 35362783 - 35362661
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||| |||  |    
T  35362783 tatcggagaaactattaggaaagatttggaaattaa-tgagttggactgaaatatggtgtatgatagaacattatggcgtaatttgatccatgcagccaa 35362685  T
Q  117 ccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||||||||    
T  35362684 ccccacttagtgggaaaaggcttg 35362661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 35914730 - 35914624
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||  ||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||    
T  35914730 agagaaactattaggaaagacttgaagattaa-tgagttggaccaaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgacccc 35914632  T
Q  121 aattagtg 128  Q
    | ||||||    
T  35914631 acttagtg 35914624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 44699634 - 44699737
Alignment:
Q  36 aaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaag 135  Q
    ||||||||||||||||| |||||| ||| ||||||||| | |||| |||||| |||||| |||| |||||| |||||| ||||||| |||||||||||||    
T  44699634 aaagatttggaaattaa-tgagttagaccgaaatatggtgcatgatagaacactatggcgtaatttgatccctgtagcagaccccacttagtgggaaaag 44699732  T
Q  136 gcttg 140  Q
    |||||    
T  44699733 gcttg 44699737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 490491 - 490606
Alignment:
Q  24 gaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaat 123  Q
    |||||||| ||||||||||| || ||| | |||||||||   ||||||||  ||||| ||||||||||||| |||| ||||||||||||| ||||||| |    
T  490491 gaaactataaggaaagatttagagattga-tgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccact 490589  T
Q  124 tagtgggaaaaggcttg 140  Q
    |||||||| ||||||||    
T  490590 tagtgggataaggcttg 490606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 45041444 - 45041327
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| ||  |||| ||||||||| |  |||||||  ||||| ||  ||||||||| |||| ||||||||||||||||||||    
T  45041444 agagaaactattaggaaagatttagaggttaa-tgagttgga-tccaatatggtttatgatagcgcattatggcgtaatttgatccatgtagctgacccc 45041347  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  45041346 acttagtgggataaggcttg 45041327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 14459048 - 14459146
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||||||||||| ||| |||||||| |||  ||||||||  |||||  |||||||||||  |||| ||||||||||||| ||||||    
T  14459048 agagaaactattaggaaagatttggagatt-aatgagttagaccaaaatatggtttatgatggaacattatggtgtaatttgatccatgtagccgacccc 14459146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 29520802 - 29520920
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||| ||||||| ||||| || ||||| |||||||||   ||||||||  ||||| ||||||||||||| |||| |||||||||||||  |||||    
T  29520802 agagaaactgttaggaacgatttagagattaa-tgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagcccacccc 29520900  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| || |||||    
T  29520901 atttagtgggataatgcttg 29520920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 1928656 - 1928598
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  1928656 agaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 1928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 27556377 - 27556323
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtggg 130  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  27556377 tatgatagaacattatggcataatttgatccatgtagccgaccccacttagtggg 27556323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 41971915 - 41971823
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacc 118  Q
    |||||| || ||||||||| || ||||| |||||||||||||||||| |  ||||| ||||||||||| | |||||| || |||||||||||||    
T  41971915 aaactactaagaaagatttagagattaa-tgagttggactgaaatattgtttatgatagaacattatgacttaatataattcatgtagctgacc 41971823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 45419388 - 45419506
Alignment:
Q  21 agagaaactattaggaaagatttggaaatta-aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccc 119  Q
    ||||||||||||||||||| |||  |||| | |||||||| ||   |||| |||  ||||| ||||||||||||  |||| ||||||||||||| |||||    
T  45419388 agagaaactattaggaaaggttt--aaatcataatgagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccatgtagccgaccc 45419485  T
Q  120 caattagtgggaaaaggcttg 140  Q
    || ||||||||| ||||||||    
T  45419486 cacttagtgggataaggcttg 45419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 11523822 - 11523734
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  11523822 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 11523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 17491783 - 17491692
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagc 113  Q
    ||||||||||||| |||||| ||||| ||||| ||||||||||  ||||||||  ||||| ||||||||||||| ||   |||||||||||||    
T  17491783 agagaaactattaagaaagacttggagattaa-tgagttggaccaaaatatggtttatgatagaacattatggcgtatgttgatccatgtagc 17491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 44529408 - 44529496
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| |||  ||||| |||||| |||||||| || ||||||||||||| ||||||| ||||||||| ||||||||    
T  44529408 aatgagttggatccaaatttggtttatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 44529496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 12491237 - 12491150
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| |||||||    
T  12491237 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 12491150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 36565340 - 36565254
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||    
T  36565340 aatgagttggatccaaatttggtgtatgatagaacactatggcgttatttgatccatgtagccgaccccacttagtgggataaggct 36565254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 2518467 - 2518422
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagt 127  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||    
T  2518467 agaacattatggcataatttgatccttgtagctgaccccacttagt 2518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 14903714 - 14903822
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||| |||||| ||||| |||| |||| ||| |||||| |||  ||||| ||  ||||| || |||||||||| |||| |||||||||||||| |||||    
T  14903714 agagagactattgggaaatatttagaaagtaa-tgagttagaccaaaataaggtttatgataggacattatggcgtaatttgatccatgtagcttacccc 14903812  T
Q  121 aattagtggg 130  Q
    | ||||||||    
T  14903813 acttagtggg 14903822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 21121344 - 21121416
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||  ||||| |||||| |||||| |||| ||||| ||||||| ||||||| ||||||||||||||||||    
T  21121344 aatatggtttatgatagaacactatggcgtaatttgatc-atgtagccgaccccacttagtgggaaaaggcttg 21121416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 21425229 - 21425306
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgg 129  Q
    |||||||||||  ||||||||   ||||| ||| |||||||||||||| ||||||||||||| ||||| | |||||||    
T  21425229 aatgagttggatcgaaatatgatttatgatagaccattatggcataatttgatccatgtagcagaccctacttagtgg 21425306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 1313771 - 1313835
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| | |||||||||| |||||||| ||||||||| || |||||    
T  1313771 tatgatagaacattatggcgtaattttatccatgtagttgaccccacttagtgggataatgcttg 1313835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 18742122 - 18742034
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  |||||  |||||||| ||| |||| ||||| ||||||  ||||||||||||||||| | ||||||    
T  18742122 aatgagttggattaaaatatggtttatgattgaacattaaggcttaatttgatcaatgtagtcgaccccaattagtgggatatggcttg 18742034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 18747086 - 18746998
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  |||||  |||||||| ||| |||| ||||| ||||||  ||||||||||||||||| | ||||||    
T  18747086 aatgagttggattaaaatatggtttatgattgaacattaaggcttaatttgatcaatgtagtcgaccccaattagtgggatatggcttg 18746998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 30559846 - 30559969
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatcc-----atgtagctg 115  Q
    ||||||||||| ||||||||||| || ||| |||||||||||   | ||||||  ||||| ||||||||||| | |||| ||||||     ||||||| |    
T  30559846 agagaaactatcaggaaagatttagagatt-aatgagttggatccatatatggtttatgatagaacattatgacgtaatttgatccatgtaatgtagccg 30559944  T
Q  116 accccaattagtgggaaaaggcttg 140  Q
    |||||| ||||||||| ||||||||    
T  30559945 accccagttagtgggataaggcttg 30559969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 36545332 - 36545420
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| | | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  36545332 aatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 36545420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 42469826 - 42469738
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||||||||||| ||| ||||| ||||||||    
T  42469826 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagctgaccccacttattgggataaggcttg 42469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 44047631 - 44047543
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| |||  ||||| ||||||  ||||| | || ||||||||||||||||||||| ||||||||| ||||||||    
T  44047631 aatgagttggatccaaatttggtttatgatagaacaccatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttg 44047543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 6483527 - 6483566
Alignment:
Q  101 tgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  6483527 tgatccatgtagctgaccctacttagtgggaaaaggcttg 6483566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 16035822 - 16035747
Alignment:
Q  56 agttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    |||||||  |||||||||  ||||  ||||||||||| | |||| |||| |||||||||||||||| |||||||||    
T  16035822 agttggatcgaaatatggtttatggtagaacattatgacgtaatttgattcatgtagctgaccccacttagtggga 16035747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 41031506 - 41031431
Alignment:
Q  65 gaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||  ||| | |||||||||||  ||||| |||||||| |||| ||||||| ||||||||| ||||||||    
T  41031506 gaaatatggtttatcacagaacattatgagataatttgatccatatagccgaccccacttagtgggataaggcttg 41031431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 41031612 - 41031537
Alignment:
Q  65 gaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||  ||| | |||||||||||  ||||| |||||||| |||| ||||||| ||||||||| ||||||||    
T  41031612 gaaatatggtttatcacagaacattatgagataatttgatccatatagccgaccccacttagtgggataaggcttg 41031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 14742151 - 14742093
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  14742151 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 14742093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 25473488 - 25473414
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| ||| || | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  25473488 aaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25473414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 29700429 - 29700534
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||| ||||||||| ||||| || |||||||| ||||  |||| | |  ||||| ||||||||||||  |||| ||||||||||||| ||| ||    
T  29700429 agagaaactaataggaaagacttggagat-aaatgagtcggaccaaaattttgtttatgatagaacattatggtgtaatttgatccatgtagccgactcc 29700527  T
Q  121 aattagt 127  Q
    | |||||    
T  29700528 acttagt 29700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 36143538 - 36143612
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| ||||||||||| | | || ||||||||||||| |||||||  |||| ||||||||||||    
T  36143538 aaatatggtttatgatagaacattatgacgtcatctgatccatgtagccgaccccacctagtcggaaaaggcttg 36143612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 43904764 - 43904698
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacc 118  Q
    |||||||||||   ||||||||  ||||| ||||||||||||| |||| ||||||||||||| ||||    
T  43904764 aatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgacc 43904698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 45512508 - 45512455
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||||||||||||  |||||| |||||||||  |||||||    
T  45512508 attatggcataatttgatccatgtagcctaccccacttagtgggatgaggcttg 45512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 8932886 - 8932962
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    |||||||||||   ||||||||| | ||| | |||| |||||| | || ||||||||||||||||||||| ||||||    
T  8932886 aatgagttggatcaaaatatggcttttgataaaacactatggcgtcatttgatccatgtagctgaccccacttagtg 8932962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 18737237 - 18737149
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  |||||  |||||||| ||| |||| ||||| ||||||  | ||||||||||||||| | ||||||    
T  18737237 aatgagttggattaaaatatggtttatgatcgaacattaaggcttaatttgatcaatgtagtcggccccaattagtgggatatggcttg 18737149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 25300282 - 25300370
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| | |||| |||| |||||| ||||| |||||||||||||||  |||||| | ||||||||    
T  25300282 aatgagttggatccaaatatggtttatgatataacactatgacataatttgatctatgtagctgaccccacctagtggaacaaggcttg 25300370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 28169545 - 28169596
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatgg 73  Q
    ||||||||||||||||||||||| || ||| ||||||||||| | ||||||||    
T  28169545 agagaaactattaggaaagattttgagatt-aatgagttggattcaaatatgg 28169596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 30689950 - 30690006
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||| | |||| ||||||||||||| ||||||| ||||||||| || |||||    
T  30689950 aacattatgacgtaatttgatccatgtagccgaccccacttagtgggataatgcttg 30690006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 35647005 - 35646953
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    ||||| ||||||||||||| |||| ||||||||| ||| ||||||| ||||||    
T  35647005 tatgatagaacattatggcgtaatttgatccatgcagccgaccccacttagtg 35646953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 40982951 - 40982907
Alignment:
Q  96 taatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| |||||||||| || ||||||| ||||||||||||||||||    
T  40982951 taatttgatccatgttgccgaccccatttagtgggaaaaggcttg 40982907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 3481304 - 3481425
Alignment:
Q  18 atcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgac 117  Q
    |||||||||||||||||||||||||||||||||||   |||||||| |||||||||  ||||| ||||||||||||| |||| |||||||||||||||||    
T  3481304 atcagagaaactattaggaaagatttggaaattaaca-agttggacagaaatatggtctatgatagaacattatggcgtaatttgatccatgtagctgac 3481402  T
Q  118 cccaattagtgggaaaaggcttg 140  Q
    |||| ||||| ||||||||||||    
T  3481403 cccacttagttggaaaaggcttg 3481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 18959064 - 18959182
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||   ||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||    
T  18959064 agagaaactataaggaaagacttggagattaa-tgagttggatcaaaatatggtctatgatagaacattatggcataatttgatccatgtagctgacccc 18959162  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  18959163 acttagtgggataaggcttg 18959182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 43752080 - 43751960
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||| |||||| ||||   |||| |||||||||| || ||    
T  43752080 tatcagagaaactattaggaaagatttggaaatt-aatgagttggaccgaaagatggtgtatgatagaacactatgttgtaatttgatccatgtggccga 43751982  T
Q  117 ccccaattagtgggaaaaggct 138  Q
    || || ||||| ||||||||||    
T  43751981 cctcacttagttggaaaaggct 43751960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 33504376 - 33504495
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||| | || ||| ||| ||||||| ||||||||||  ||||| ||||||||||||| |||| |||||||| |||| ||||||    
T  33504376 agagaaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaatttgatccatctagccgacccc 33504475  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  33504476 acttagtgggataaggcttg 33504495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 37470262 - 37470146
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||| |||| | || ||||| |||||||||  |||||||||| ||||| ||||||||||||  || | |||||||||||||| | |||    
T  37470262 agagaaactattaggacagatctagagattaa-tgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatccatgtagctaatccc 37470164  T
Q  121 aattagtgggaaaaggct 138  Q
    | ||||||||| ||||||    
T  37470163 acttagtgggataaggct 37470146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 9496019 - 9496137
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||  ||||||||| ||  |||| |||||||||   ||||||||  ||||| ||||||||||||| |||| |||||||||||||  |||||    
T  9496019 agagaaactattcagaaagatttagaggttaa-tgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaacccc 9496117  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  9496118 acttagtgggacaaggcttg 9496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 31959704 - 31959792
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| ||||||||||| ||||||||||||| ||||||| ||||| ||| ||||||||    
T  31959704 aatgagttggatccaaatatggtttatgatagaacactatggcataatttgatccatgtagcagaccccacttagtaggataaggcttg 31959792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 32365034 - 32364932
Alignment:
Q  37 aagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaagg 136  Q
    |||||||||||||||| |||||||||| | | ||| | |||||| ||||||||||||  |||| ||||| |||||||||||| || ||| | ||||||||    
T  32365034 aagatttggaaattaa-tgagttggaccggactattgtgtatgatagaacattatggtgtaatttgatcaatgtagctgacctcacttaataggaaaagg 32364936  T
Q  137 cttg 140  Q
    ||||    
T  32364935 cttg 32364932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 6219127 - 6219236
Alignment:
Q  30 attaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgg 129  Q
    |||||||||||||| || ||||  |||||||||| |||||||||  ||||| ||||||||||||  |||| |||||||||||||  ||||||  |||| |    
T  6219127 attaggaaagatttagagattag-tgagttggaccgaaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaaccccacctagttg 6219225  T
Q  130 gaaaaggcttg 140  Q
    || ||||||||    
T  6219226 gataaggcttg 6219236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 9531685 - 9531611
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  |||||  |||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  9531685 aaatatggtttatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 9531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 12141698 - 12141815
Alignment:
Q  22 gagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccca 121  Q
    ||||||||||||||||||| || || ||||| ||| |||||   ||||||||  ||||| ||||||||||||||| || ||||| |||||||  ||||||    
T  12141698 gagaaactattaggaaagacttagagattaa-tgacttggatccaaatatggtatatgatagaacattatggcatgatttgatcgatgtagccaacccca 12141796  T
Q  122 attagtgggaaaaggcttg 140  Q
     ||||||||  ||||||||    
T  12141797 tttagtggggtaaggcttg 12141815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 19337020 - 19336931
Alignment:
Q  23 agaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagc 113  Q
    ||||||||| | ||||||||| || ||||| |||||||||  |||||||||  ||||| ||||||||||||| |||| |||||||||||||    
T  19337020 agaaactataaagaaagatttagagattaa-tgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 19336931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 227372 - 227460
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  227372 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 227460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 3720490 - 3720426
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||  |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  3720490 tatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggagaaggcttg 3720426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 33287574 - 33287692
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||| | |||||||| |||||| ||  |||||||||  ||||| ||||||||||| |||| | |||||| ||||||  || ||    
T  33287574 agagaaactattaagaaagatctagaaattaa-tgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaactcc 33287672  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||| ||||    
T  33287673 acttagtgggacaagacttg 33287692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 38435105 - 38435223
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||| | || ||||| || ||||||  ||||| |||  |||||  |||||||||||| |||| ||||||||||||| || |||    
T  38435105 agagaaactattaagaaagatctagagattaa-tgtgttggatcgaaatttggtttatgattgaacattatggcgtaatttgatccatgtagccgatccc 38435203  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||| | ||||||||    
T  38435204 acttagtggcataaggcttg 38435223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 11992177 - 11992119
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||| | ||||||||    
T  11992177 agaacattatggcgttatttgatccatgtagctgaccccacttagtggaataaggcttg 11992119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 21281532 - 21281474
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| ||||||||| |||  |||||||||||||||| ||||||||    
T  21281532 agaacattatggcttaatttgatccatgcagccaaccccaattagtgggataaggcttg 21281474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 451724 - 451659
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  451724 gtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttg 451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 887134 - 887085
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    ||||||||||||| |||| ||||||||||||||||||||| || ||||||    
T  887134 agaacattatggcgtaatttgatccatgtagctgaccccacttggtggga 887085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 12475003 - 12474938
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  12475003 gtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 12520146 - 12520073
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||  ||||| | |||| |||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  12520146 aatatggtttatgataaaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 12520073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 19863432 - 19863505
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||  ||||| ||||||||||||||| || ||||||||||||| | ||||| ||||||||| || |||||    
T  19863432 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttg 19863505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 19867764 - 19867837
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||  ||||| ||||||||||||||| || ||||||||||||| | ||||| ||||||||| || |||||    
T  19867764 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttg 19867837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 19872665 - 19872738
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||  ||||| ||||||||||||||| || ||||||||||||| | ||||| ||||||||| || |||||    
T  19872665 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttg 19872738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 43573198 - 43573141
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  43573198 gaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 43573141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 3635422 - 3635334
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  3635422 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 3635334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 3866255 - 3866343
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| ||| || ||||||||||||| ||||||| ||||| ||| ||||||||    
T  3866255 aatgagttggatccaaatttggtgtatgatagaacactatgacatcatttgatccatgtagccgaccccacttagtaggataaggcttg 3866343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 7326259 - 7326171
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || |||||||||||||  |||||| ||||||||| ||||||||    
T  7326259 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 7326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 12734883 - 12734971
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| |||||  |||| ||||||||||||  ||||||| ||||||||| ||||||||    
T  12734883 aatgagttggatccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttg 12734971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 17429257 - 17429321
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||||| |||||| || ||||||||    
T  17429257 tatgatagaacattatgacataatttgattcatgtagccgaccccacttagtgagataaggcttg 17429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 25834861 - 25834949
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| | |||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  25834861 aatgagttggatccaaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 28508861 - 28508949
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| |||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  28508861 aatgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28508949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 30306239 - 30306303
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  30306239 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 34931639 - 34931703
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||||||||||||||| |||||||| |||| ||||  | ||||||||| ||||||||    
T  34931639 tatgatagaacattatggcataatttgatccatatagccgaccgtacttagtgggacaaggcttg 34931703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 45077884 - 45077988
Alignment:
Q  25 aaactattaggaaagatttggaaattaaat-gagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaat 123  Q
    ||||||||| ||||||||| || |||||   ||||||||  ||||||| |  ||||| ||||||| |||||||||| ||||||||||| | ||||||| |    
T  45077884 aaactattaagaaagatttagagattaatgagagttggatcgaaatatagtttatgatagaacataatggcataatttgatccatgtaaccgaccccact 45077983  T
Q  124 tagtg 128  Q
    |||||    
T  45077984 tagtg 45077988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 45543201 - 45543084
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||| |||||||| ||  |  |||||||| ||   ||||||||  ||||| ||||||||||||| || | ||||| ||||||| ||||||    
T  45543201 agagaaactattagaaaagatttagaggt--aatgagttcgatccaaatatggtttatgatagaacattatggcgtactttgatctatgtagccgacccc 45543104  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| || |||||    
T  45543103 acttagtgggataatgcttg 45543084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 12882174 - 12882056
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||| ||||||| |||| ||  |||| |||||||||   ||||||||  | ||| |||||||| |||| |||| |||||||||||||  ||| |    
T  12882174 agagaaactactaggaaatatttagaggttaa-tgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtagcctacctc 12882076  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  12882075 acttagtgggataaggcttg 12882056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 38328444 - 38328381
Alignment:
Q  77 atgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  38328444 atgatagaacactatggcttcatttgatccatgtagccgaccccacttagtgggataaggcttg 38328381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 4807808 - 4807866
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  4807808 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 4807866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 17670681 - 17670739
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  17670681 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 17670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 32443851 - 32443897
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtggg 130  Q
    |||||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  32443851 aacattatggcataatttgatccatgtagccgactccacttagtggg 32443897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 39709286 - 39709212
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  |||||  ||||| |||||| |||| ||||||||||||| ||||||| ||||||||| | ||||||    
T  39709286 aaatatggtttatgattgaacactatggcgtaatttgatccatgtagccgaccccacttagtgggatatggcttg 39709212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 10516813 - 10516760
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| |||| |||||||||||||||| | || ||||||||| ||||||||    
T  10516813 attatggcgtaatttgatccatgtagctgatctcacttagtgggataaggcttg 10516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 13443977 - 13443920
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    ||||||||||||| | || ||||| ||||||| ||||||| ||||||||| |||||||    
T  13443977 agaacattatggcgtcatttgatcgatgtagccgaccccatttagtgggataaggctt 13443920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 36366819 - 36366896
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgg 129  Q
    |||||||||||| |||||||||  ||| | ||||||||||||  |||| ||||||||||| |  |||||| |||||||    
T  36366819 aatgagttggaccgaaatatggtttataatagaacattatggtgtaatttgatccatgtatccaaccccatttagtgg 36366896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 440931 - 440987
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||| |||| ||| ||||    
T  440931 aacattatggcgtaatttgatccatgtagctgactccacttagagggataagacttg 440987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 2610771 - 2610859
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||| | ||||||| |||||| || ||||||||    
T  2610771 aatgagttggatccaaatttggtgtatgatagaacactatggcgttatttgatccatgtaaccgaccccacttagtgagataaggcttg 2610859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 3030894 - 3030949
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||||||| | ||||||||||| ||||||| ||||||||| ||| ||||    
T  3030894 aacattatggcataattttatccatgtagc-gaccccacttagtgggataagccttg 3030949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 35643131 - 35643219
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| ||| || | || |||||||| ||||||| ||||||||| ||||||||    
T  35643131 aatgagttggatccaaatttggtgtatgatagaacactatgacatcatttaatacatgtagccgaccccacttagtgggataaggcttg 35643219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 38430067 - 38430155
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||| ||||||| |||||| || ||||||||    
T  38430067 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgagataaggcttg 38430155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 42510149 - 42510027
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||  ||||||||  |||||  |||||||||||| |||| ||||||||||||| ||    
T  42510149 tatcagagaaaccattaggaaagatttggaaat-aaatgagttggaccaaaatatggtttatgattgaacattatggcgtaatttgatccatgtagccga 42510051  T
Q  117 ccccaattagtgggaaaaggcttg 140  Q
    ||||| |||| |||||||||||||    
T  42510050 ccccacttagagggaaaaggcttg 42510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 45289220 - 45289102
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| || ||||| |||||||||   ||||||||  ||||| |||||||||| ||||||| |||||||||| ||  |||||    
T  45289220 agagaaactattaggaaagatttagagattaa-tgagttggatccaaatatggtttatgatagaacattatagcataatttgatccatgtcgccaacccc 45289122  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  45289121 acttagtgggataaggcttg 45289102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 54128532 - 54128650
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||| ||||||||||| | |  | ||||||||||||  ||||||||  ||||| |||||||||||||||||| ||||||||||||  ||||||    
T  54128532 agagaaactataaggaaagatttag-aggtcaatgagttggacccaaatatggtttatgatagaacattatggcataatttgatccatgtaggcgacccc 54128630  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  54128631 acttagtgggataaggcttg 54128650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 19676210 - 19676092
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||| |||| ||  |||| |||||||||   |||||||  |||||| ||| ||||||||| | || ||||||||||||||||||||    
T  19676210 agagaaactattaggaaaaatttagaggttaa-tgagttggatccaaatatgctgtatgatagagcattatggcgtgatttgatccatgtagctgacccc 19676112  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  19676111 acttagtgggataaggcttg 19676092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 49841799 - 49841868
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccca 121  Q
    |||||||||||  |||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||    
T  49841799 aatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccatgtagctgacccca 49841868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 48508418 - 48508506
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  ||||| |||||| |||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  48508418 aatgagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 48508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 19758044 - 19758157
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    |||||||||||||| |||| || ||||| |||||||||    |||||||  ||||| |||||||||||| ||||| ||||||||||||| ||||||| ||    
T  19758044 aaactattaggaaatatttagagattaa-tgagttggatctcaatatggtttatgatagaacattatggtataatttgatccatgtagc-gaccccactt 19758141  T
Q  125 agtgggaaaaggcttg 140  Q
    ||||||| ||||||||    
T  19758142 agtgggataaggcttg 19758157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 40116459 - 40116349
Alignment:
Q  29 tattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    |||||||| |||||| || ||||| |||||||||| |||||||||  ||||| ||||||||||||| |||| ||||||| ||||| |||| |  ||||||    
T  40116459 tattaggatagatttagagattaa-tgagttggaccgaaatatggtttatgatagaacattatggcgtaatttgatccacgtagccgacctcgcttagtg 40116361  T
Q  129 ggaaaaggcttg 140  Q
    ||| ||||||||    
T  40116360 ggataaggcttg 40116349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 52927917 - 52927859
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  52927917 agaacattatggcataatttgatccatgtagccgaccccacttagtgggataaggcttg 52927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 23534697 - 23534609
Alignment:
Q  23 agaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtag 112  Q
    |||||||||||||||||| || || ||||| |||||||||||| ||||||   ||||| ||||||||||||| |||| ||||||||||||    
T  23534697 agaaactattaggaaagacttagagattaa-tgagttggactgtaatatgatttatgatagaacattatggcgtaatttgatccatgtag 23534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 40991594 - 40991690
Alignment:
Q  31 ttaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    |||||||||| ||| | ||||| ||||||||||  ||||||||  ||||| ||||||||||||  |||| ||||||||||||||||||||| ||||||    
T  40991594 ttaggaaagacttgaagattaa-tgagttggaccaaaatatggtttatgatagaacattatggtgtaatttgatccatgtagctgaccccacttagtg 40991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 29601052 - 29601163
Alignment:
Q  28 ctattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagt 127  Q
    |||||| ||||||||| || ||||| ||||||||| | |||||| |  ||||| |||||||||||   |||| ||||||||||||||||||||| |||||    
T  29601052 ctattaagaaagatttagagattaa-tgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccatgtagctgaccccacttagt 29601150  T
Q  128 gggaaaaggcttg 140  Q
    |||| | ||||||    
T  29601151 gggatacggcttg 29601163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 48734222 - 48734158
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||  ||||||||||||||||||||| ||||||||| ||||||||    
T  48734222 tatgatagaacattatggcgtaagttgatccatgtagctgaccccacttagtgggataaggcttg 48734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 19737141 - 19737254
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    |||||||||||||| |||| || ||||| |||||||||    |||||||  ||||| | |||||||||| ||||| ||||||||||||| ||||||| ||    
T  19737141 aaactattaggaaatatttagagattaa-tgagttggatctcaatatggtttatgataaaacattatggtataatttgatccatgtagc-gaccccactt 19737238  T
Q  125 agtgggaaaaggcttg 140  Q
    ||||||| ||||||||    
T  19737239 agtgggataaggcttg 19737254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 49888361 - 49888454
Alignment:
Q  39 gatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaagg 136  Q
    ||||| |||||||| ||||||||||||||||||||  |||||||   ||||||| | |||| ||||||||||||| ||||||| ||||| ||||||||    
T  49888361 gattttgaaattaa-tgagttggactgaaatatggtttatgaaa---cattatgacgtaatttgatccatgtagccgaccccacttagttggaaaagg 49888454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 50960766 - 50960648
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||| ||| || ||||| |||||||||   |||||||| |||| | ||| ||||||||  |||| |||||||| ||||  |||||    
T  50960766 agagaaactattaggaaaggtttagagattaa-tgagttggatccaaatatggtgtatcatagaccattatggtgtaatttgatccatttagccaacccc 50960668  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  50960667 acttagtgggataaggcttg 50960648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 34844702 - 34844585
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||| | ||||| ||||| |||| |||||   ||||  |  ||||| |||||||||||| ||||||||||||||||||| ||||||    
T  34844702 agagaaactattaggaaaaacttggagattaa-tgaggtggaccagaatactgtttatgatagaacattatggtataatatgatccatgtagccgacccc 34844604  T
Q  121 aattagtgggaaaaggctt 139  Q
    | | ||| ||| |||||||    
T  34844603 actaagtaggataaggctt 34844585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 40672432 - 40672378
Alignment:
Q  86 cattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||||| |||||||||||||||||| || ||||||||| ||||||||    
T  40672432 cattatggcataatttgatccatgtagctgacctcacttagtgggataaggcttg 40672378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 45374546 - 45374488
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| | ||||||||||||||||||| ||||||||| ||||||||    
T  45374546 agaacattatggcgtaatttaatccatgtagctgaccccacttagtgggataaggcttg 45374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 45486933 - 45486860
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||  ||||| |||||||||||||||||| ||||||||||||| | ||||| ||||||||| || |||||    
T  45486933 aatatggtttatgatagaacattatggcataatttgatccatgtagccggccccacttagtgggataaagcttg 45486860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 12096804 - 12096716
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  12096804 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 40106719 - 40106631
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| ||||||||||| |||||| ||||| ||||||  ||||||| ||||||||| ||||||||    
T  40106719 aatgagttggatccaaatatggtttatgatagaacattatgacataatttgatcaatgtagtggaccccacttagtgggataaggcttg 40106631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 46148235 - 46148299
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||||  ||||||||    
T  46148235 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggtcaaggcttg 46148299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 49042089 - 49042208
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgt-atgaaagaacattatggcataatatgatccatgtagctgaccc 119  Q
    ||||||||||||||||||||||| ||  |||| |||||||||   ||||||||  | |||| |||||| |||||| |||| ||||||||||||| |||||    
T  49042089 agagaaactattaggaaagatttagaggttaa-tgagttggatccaaatatggttttatgatagaacactatggcgtaatttgatccatgtagccgaccc 49042187  T
Q  120 caattagtgggaaaaggcttg 140  Q
    || || ||| || ||||||||    
T  49042188 cacttggtgagataaggcttg 49042208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 54365104 - 54364987
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||||| ||||| ||| |||| ||| |||  ||||||||  ||||| |||||| |||| | |||| ||||||||||||| |||| |    
T  54365104 agagaaactattaggaaagacttggagatt-aatgtgttagaccaaaatatggtttatgatagaacactatgacgtaatttgatccatgtagccgaccac 54365006  T
Q  121 aattagtgggaaaaggcttg 140  Q
     | |||||||| ||||||||    
T  54365005 -actagtgggataaggcttg 54364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 24541401 - 24541343
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| ||||||||||| | ||||||| ||||||||| ||||||||    
T  24541401 agaacattatggcgtaatttgatccatgtacccgaccccacttagtgggataaggcttg 24541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 24778678 - 24778620
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||  |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  24778678 agaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 24778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 40116597 - 40116520
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataat 99  Q
    |||||||||||||||| |||||| || ||||| |||||||||| |||||||||  ||||| |||||||| |||| ||||    
T  40116597 agagaaactattaggatagatttagagattaa-tgagttggaccgaaatatggtttatgatagaacattgtggcgtaat 40116520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 52156183 - 52156097
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    |||||||||||   ||||||||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||    
T  52156183 aatgagttggatccaaatatggtttatgatagaacactatggcgtcatctgatccatgtagccgaccccacttagtgggataaggct 52156097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 20208196 - 20208269
Alignment:
Q  67 aatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| | ||| ||||| ||||||||| || ||||||||||||| ||||||| ||||||||| || |||||    
T  20208196 aatatggcatttgatagaactttatggcatcatttgatccatgtagccgaccccatttagtgggataacgcttg 20208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 41529975 - 41530032
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  41529975 gaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 41530032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5169015 - 5169103
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  5169015 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 5169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 14415358 - 14415271
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||  | ||||||  ||||| | |||||||||||||||| |||| |||||||| ||||||| ||||||||| ||| ||||    
T  14415358 aatgagttggacccacatatggtttatgatataacattatggcataatttgat-catgtagccgaccccacttagtgggataagacttg 14415271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 32170592 - 32170664
Alignment:
Q  56 agttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    |||||||  |||||||||  ||||| | ||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  32170592 agttggatagaaatatggtctatgatataacattatgacataatttgatccatgtagccgaccccacttagtg 32170664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 36304123 - 36304218
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccca 121  Q
    ||||||||| ||||||| | || ||||| |||||||||   ||||||||  ||||| || |||||||||| |||| ||||||||||||| |||||||    
T  36304123 aaactattaagaaagatctagagattaa-tgagttggatcaaaatatggtttatgataggacattatggcgtaatttgatccatgtagccgacccca 36304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 47555431 - 47555343
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || |||||||||||||  |||||| ||||||||| ||||||||    
T  47555431 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 47555343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 52138983 - 52139071
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| | | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  52138983 aatgagttggatccaaatttggtgtatgatagaacactatgacgttatttgatccatgtagccgaccccacttagtgggataaggcttg 52139071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 15296060 - 15296178
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| ||  |||| ||| |||||   |||||||   |  || ||||||||||||  |||| |||||||||| || ||||||    
T  15296060 agagaaactattaggaaagatttagaggttaa-tgaattggatccaaatatgatttcggatagaacattatggtgtaatttgatccatgtggccgacccc 15296158  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  15296159 acttagtgggataaggcttg 15296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 38060897 - 38060976
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    |||||||||||   ||||||||  ||||| ||||||  ||||| |||| ||||||||||||| ||||||| |||||||||    
T  38060897 aatgagttggatccaaatatggtttatgatagaacaccatggcgtaatttgatccatgtagccgaccccacttagtggga 38060976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 7895965 - 7895891
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||| ||||| ||||||||    
T  7895965 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 7895891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 35420482 - 35420539
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| || |||||||||| ||||||| ||||||||| ||||||||    
T  35420482 agaacattatggcgtaatttggtccatgtagc-gaccccatttagtgggataaggcttg 35420539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 39208805 - 39208879
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| ||||||||||| | |||| ||||||||||||  ||||||| ||||||||| | ||||||    
T  39208805 aaatatggtttatgatagaacattatgacgtaatttgatccatgtagaggaccccagttagtgggatatggcttg 39208879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 40273274 - 40273220
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaagg 136  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||||||||    
T  40273274 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggaaaagg 40273220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 7446277 - 7446314
Alignment:
Q  101 tgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  7446277 tgatccatgtagctgactccacttagtgggaaaaggct 7446314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 7454419 - 7454456
Alignment:
Q  101 tgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  7454419 tgatccatgtagctgactccacttagtgggaaaaggct 7454456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 37083360 - 37083303
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||| |||| || ||| |||||| ||||||| ||||||||| ||||||||    
T  37083360 gaacattatggcgtaatttggtccttgtagccgaccccacttagtgggataaggcttg 37083303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 41482267 - 41482183
Alignment:
Q  21 agagaaactattaggaaaga-tttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatc 105  Q
    |||||||||||||||||||| |||||| ||| ||||||||| ||  |||| |||  ||||| ||||||||||||| |||| |||||    
T  41482267 agagaaactattaggaaagactttggagatt-aatgagttgaaccaaaatctggtttatgatagaacattatggcgtaatttgatc 41482183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 49503632 - 49503579
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| |||| ||||||||||||| ||||| | ||||||||| ||||||||    
T  49503632 attatggcgtaatttgatccatgtagccgaccctacttagtgggataaggcttg 49503579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 52882726 - 52882673
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| |||| |||||||||||||  |||||| ||||||||| ||||||||    
T  52882726 attatggcgtaatttgatccatgtagccaaccccacttagtgggagaaggcttg 52882673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 659732 - 659796
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||||   | ||||||||||||| ||||||| ||||||||  ||||||||    
T  659732 tatgatagaacattatggcagtgtttgatccatgtagccgaccccacttagtggggtaaggcttg 659796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 49045042 - 49045106
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||||||||||  ||| | ||||||||||| ||||||| | ||||||| ||||||||    
T  49045042 tatgacagaacattatggccgaatttaatccatgtagccgaccccactcagtgggacaaggcttg 49045106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 51447816 - 51447728
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || |||| |||||||| | ||||| ||||||||| ||||||||    
T  51447816 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgattcatgtagccggccccatttagtgggataaggcttg 51447728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 53262324 - 53262412
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||| ||||||| ||||||| ||||||||| ||||||||    
T  53262324 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttg 53262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 52532745 - 52532627
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| |||||||| |||||||||   ||||||||  ||||| ||||||||||||| |||| |||| |||||||| ||||||    
T  52532745 agagaaactattaggaaagatttagaaattaa-tgagttggaacaaaatatggtttatgatagaacattatggcgtaatttgattcatgtagccgacccc 52532647  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||||||||||||    
T  52532646 acttagtgggaaaaggcttg 52532627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 7133429 - 7133313
Alignment:
Q  23 agaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaa 122  Q
    |||||||||||| || ||||||| |||||| |||||||||| |||||| || | |||| |||||||| |||| |||| |||||||||||||||||||||     
T  7133429 agaaactattagaaatgatttggtaattaa-tgagttggaccgaaatacggtgaatgatagaacattttggcctaatttgatccatgtagctgaccccac 7133331  T
Q  123 ttagtgggaaaaggcttg 140  Q
    ||||||||||||||||||    
T  7133330 ttagtgggaaaaggcttg 7133313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 50846709 - 50846833
Alignment:
Q  15 aatatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagct 114  Q
    |||||||||||||||||| |||||||||||||||||||  |||||| ||  |||||| |  ||||| |||||||||||||||||| ||||| |||||||     
T  50846709 aatatcagagaaactatttggaaagatttggaaattaac-gagttgaaccaaaatatagtttatgatagaacattatggcataatttgatctatgtagcc 50846807  T
Q  115 gaccccaattagtgggaaaaggcttg 140  Q
    ||| ||| |||||||||||| |||||    
T  50846808 gacaccacttagtgggaaaatgcttg 50846833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 27072607 - 27072498
Alignment:
Q  30 attaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgg 129  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||  ||||| ||||||||||||| |||| ||||||||||||| ||||    |||||||    
T  27072607 attaggaaagatttagaaattaaa-gagttggacagaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccatgcttagtgg 27072509  T
Q  130 gaaaaggcttg 140  Q
    |||||||||||    
T  27072508 gaaaaggcttg 27072498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 2544762 - 2544864
Alignment:
Q  37 aagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaagg 136  Q
    ||||||||||||| || |||||||||  |||||||||  ||| | |||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  2544762 aagatttggaaatcaa-tgagttggagcgaaatatggtttataatagaacattatggcataatttgatccatgtagccgaccccacttagtggtaaaagg 2544860  T
Q  137 cttg 140  Q
    ||||    
T  2544861 cttg 2544864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 8796362 - 8796480
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||| | || ||||| ||| ||||| ||||||||||  ||||| ||||||||||||| |||| | ||||||||||| ||||||    
T  8796362 agagaaactattaagaaagatctagatattaa-tgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgacccc 8796460  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  8796461 acttagtgggataaggcttg 8796480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 36339936 - 36339815
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||   |||| | |||||||||   |||| ||||||||||||||||    
T  36339936 tatcagagaaactattaggaaagatttg-aaattaa-tgagttggacagaaacatggttaatgataaaacattatgaagtaatttgatccatgtagctga 36339839  T
Q  117 ccccaattagtgggaaaaggcttg 140  Q
    | ||| |||||||||||| |||||    
T  36339838 ctccacttagtgggaaaatgcttg 36339815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 41560382 - 41560500
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||| | |||| || ||||| |||||||||   ||||||||  ||||| ||||||||||||| |||| ||||||||||||| ||||||    
T  41560382 agagaaactattaggatacatttagagattaa-tgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgacccc 41560480  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  41560481 acttagtgggataaggcttg 41560500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 35828687 - 35828573
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    ||||||||||||||||||||  |||||| |||||||||  |||||||||  || || ||||||||||||||  || ||||||||||| | ||||||  ||    
T  35828687 aaactattaggaaagatttgataattaa-tgagttggatggaaatatggtttacgatagaacattatggcaatatttgatccatgtaaccgaccccgctt 35828589  T
Q  125 agtgggaaaaggcttg 140  Q
    ||||||||||| ||||    
T  35828588 agtgggaaaagacttg 35828573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 28511930 - 28511821
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||| || ||||||||| ||||| ||||| ||||||||||  ||| ||||  ||||| ||||||||||||| |||| ||||| ||||||| ||||||    
T  28511930 agagaaattactaggaaagacttggagattaa-tgagttggaccaaaacatggtttatgatagaacattatggcgtaatttgatcaatgtagccgacccc 28511832  T
Q  121 aattagtggga 131  Q
    | |||||||||    
T  28511831 acttagtggga 28511821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 1661572 - 1661684
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| |||||| || ||||||||| ||||| |||  | ||| |||||||| |||| |||  |||||  ||||| |||||||    
T  1661572 agagaaactattaggaaagatttagaaatt-aacgagttggaccgaaatgtggtttgtgatagaacattttggcgtaaattgatcactgtagttgacccc 1661670  T
Q  121 aattagtgggaaaa 134  Q
    | ||||||||||||    
T  1661671 acttagtgggaaaa 1661684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 43375722 - 43375618
Alignment:
Q  26 aactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatta 125  Q
    |||||||| ||||||||| || ||||| |||||||||| |||||||||   |||| ||||||||||| |||||| |||||||||||||  | |||| |||    
T  43375722 aactattaagaaagatttagagattaa-tgagttggaccgaaatatggttcatgatagaacattatgacataatttgatccatgtagccaatcccactta 43375624  T
Q  126 gtggga 131  Q
    ||||||    
T  43375623 gtggga 43375618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 17269064 - 17269000
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| ||||    
T  17269064 tatgatagaacattatggcgtaatttgatccatgtagccgaccccatttagtgggaaaagtcttg 17269000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 25715425 - 25715337
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||| || |||||||||  ||||| |||| |||||||| |||| ||||||||||||| |||| || ||||||||| ||||||||    
T  25715425 aatgagttgaaccgaaatatggtttatgatagaatattatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttg 25715337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 37294183 - 37294127
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaa 132  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  37294183 tatgatagaacattatggcgtaatttgatccatgtagctgaccccatttagtgggaa 37294127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 8676994 - 8676883
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcg---tatgaaagaacattatggcataatatgatccatgtagctgac 117  Q
    |||||||||||||  |||||||| || ||||| |||||||||| ||||||||| |   ||||| |||| ||||||||||||| ||||||||||||| |||    
T  8676994 agagaaactattaaaaaagatttagagattaa-tgagttggaccgaaatatggtggtctatgatagaatattatggcataatttgatccatgtagccgac 8676896  T
Q  118 cccaattagtggg 130  Q
     ||  ||||||||    
T  8676895 tccggttagtggg 8676883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 22175342 - 22175416
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| |||||||||||| | ||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  22175342 aaatatggtttatgatagaacattatggtagaatttgatccatgtagccgaccccacttagtgggataaggcttg 22175416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 28090779 - 28090705
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||| ||||    
T  28090779 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttg 28090705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 37462945 - 37462887
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  37462945 agaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 37462887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 32404655 - 32404539
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| || ||||| ||||||  |   ||| ||||  ||||| | ||||| ||||| |||| ||||||||||||| ||||||    
T  32404655 agagaaactattaggaaagatttagagattaa-tgagttaaatccaaacatggtttatgatataacataatggcgtaatttgatccatgtagccgacccc 32404557  T
Q  121 aattagtgggaaaaggct 138  Q
    | ||||||||| ||||||    
T  32404556 acttagtgggataaggct 32404539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 1210928 - 1211016
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  1210928 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 1211016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 19908134 - 19908046
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  |||||  ||||||||| || |||| | ||||||||||| ||||||| ||||||||| ||||||||    
T  19908134 aatgagttggattcaaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggataaggcttg 19908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 25979330 - 25979242
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  25979330 aatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25979242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 29128936 - 29129055
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgat-ccatgtagctgaccc 119  Q
    ||||||||||||||||||||||| ||  ||||   |||||||   ||||||||  ||||| ||||||||||||  ||||||||| ||||||||| |||||    
T  29128936 agagaaactattaggaaagatttagaggttaaca-agttggatccaaatatggtttatgatagaacattatggtgtaatatgatcccatgtagccgaccc 29129034  T
Q  120 caattagtgggaaaaggcttg 140  Q
    || |||||| || ||||||||    
T  29129035 cacttagtgagataaggcttg 29129055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 30202229 - 30202141
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  30202229 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30202141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 37311854 - 37311766
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||||||||||||    
T  37311854 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 37311766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 40568509 - 40568421
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||  ||||||||  ||||| |||| | |||||| |||| |||||||||||||  |||||| ||||||||| ||||||||    
T  40568509 aatgagttggaccaaaatatggtttatgatagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttg 40568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 44941851 - 44941787
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  44941851 tatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 44941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 49347492 - 49347404
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  49347492 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 49347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 9599523 - 9599409
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||| |||| ||  |||| |||||| ||   | ||||||  ||||| ||||| ||||||| |||| ||||||||||||||||||      
T  9599523 agagaaactattaggaaatatttagagtttaa-tgagtttgatccagatatggtttatgatagaacgttatggcgtaatttgatccatgtagctgacctt 9599425  T
Q  121 aattagtgggaaaagg 136  Q
    | ||||||||||||||    
T  9599424 acttagtgggaaaagg 9599409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 27704156 - 27704215
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaa 134  Q
    |||||| ||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||    
T  27704156 gtatgatagaacattatggcgtaatttgatccatgtagccgaccccgcttagtgggaaaa 27704215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 52561718 - 52561600
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||| ||||||||||||| ||  |||| |||||||||   ||||||||  |  |  |||||||||||||  ||| ||||||||||||| ||||||    
T  52561718 agagaaactgttaggaaagatttagaggttaa-tgagttggatccaaatatggtttcgggtagaacattatggcgaaatttgatccatgtagccgacccc 52561620  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  52561619 acttagtgggataaggcttg 52561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 52900764 - 52900682
Alignment:
Q  28 ctattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgta 111  Q
    ||||||||| |||||| || ||||| ||||||||||||||||||||  ||||| |||||| ||||||  ||| |||||||||||    
T  52900764 ctattaggacagatttagagattaa-tgagttggactgaaatatggtttatgatagaacactatggcggaatttgatccatgta 52900682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 21769780 - 21769722
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| ||||||||||||| ||||||| |||||| || ||||||||    
T  21769780 agaacattatggcgtaatttgatccatgtagccgaccccacttagtgtgataaggcttg 21769722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 42337753 - 42337827
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||||| || |||||||||||||  |||||| ||||||||| ||||||||    
T  42337753 aaatttggtgtatgatagaacactatggcatcatttgatccatgtagccaaccccacttagtgggataaggcttg 42337827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 1290116 - 1290043
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    ||||||||  ||||| |||||||||||||||||| |||||||||| || ||||||| | ||| ||| |||||||    
T  1290116 aaatatggtttatgatagaacattatggcataatttgatccatgtggccgaccccactcagttggataaggctt 1290043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 29577458 - 29577523
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  29577458 gtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29577523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 32112065 - 32112000
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| ||||||||||||| |||| ||||| ||||||| || |||| ||||| ||||||||||||    
T  32112065 gtatgatagaacattatggcgtaatttgatcaatgtagccgaacccacttagttggaaaaggcttg 32112000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 41165500 - 41165553
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| | || ||||||||||||| ||||||| ||||||||||||||||||    
T  41165500 attatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 41165553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 2429704 - 2429640
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| ||||||| ||||| ||||||| ||||||||| || |||||    
T  2429704 tatgatagaacattatggcgtaatttgatccacgtagccgaccccacttagtgggacaaagcttg 2429640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 32082856 - 32082768
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggca-taatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    ||||||||||| | ||||||||  | ||| |||||| || |||| | || ||||||||||||| ||||||| |||||||||||||||||    
T  32082856 aatgagttggattcaaatatggtttttgatagaacactacggcagtcatttgatccatgtagccgaccccacttagtgggaaaaggctt 32082768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 38869089 - 38869153
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |  | ||||||||||||| ||||||| |||||||||||| |||||    
T  38869089 tatgatagaacattatggcgtcgtttgatccatgtagccgaccccacttagtgggaaaatgcttg 38869153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 48801734 - 48801625
Alignment:
Q  28 ctattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagt 127  Q
    |||||||||||| ||||| ||||||  |||||||||  ||||||||  ||||| |||||||||   |||||| |||||||||||||||| |||| ||||     
T  48801734 ctattaggaaagttttgggaattaac-gagttggacc-aaatatggtttatgatagaacattaca-cataatttgatccatgtagctgatcccacttagc 48801638  T
Q  128 gggaaaaggcttg 140  Q
    ||||||| |||||    
T  48801637 gggaaaatgcttg 48801625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 51602239 - 51602327
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| ||||||| ||||| | || |||||||||||||  |||||| ||||||||| ||||||||    
T  51602239 aatgagttggatccaaatttggtgtatgatagaacatcatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 51602327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 3818985 - 3818867
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||||| || ||||| ||||||| |  |||||||||  |||||  |||||||||| |   || ||||||||||||| |||  |    
T  3818985 agagaaactattaagaaagatttagagattaa-tgagttgaatagaaatatggtttatgatggaacattatgtcgccatttgatccatgtagccgactgc 3818887  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  3818886 acttagtgggataaggcttg 3818867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 4318895 - 4318856
Alignment:
Q  101 tgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  4318895 tgatccatgtagccgaccccacttagtgggaaaaggcttg 4318856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 31274499 - 31274412
Alignment:
Q  53 atgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||| || ||||||||||  ||||| | ||| ||||||| |||| |||||  |||||||||||||| ||||||||| || |||||    
T  31274499 atgagttagattgaaatatggtttatgatataacgttatggcgtaatttgatctgtgtagctgaccccacttagtgggataatgcttg 31274412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 4415562 - 4415620
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||||| || ||||||||||||| ||| ||| ||||||| ||||| ||||    
T  4415562 agaacattatggcatcatttgatccatgtagccgactccatttagtggaaaaagacttg 4415620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 38877412 - 38877354
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| | || ||||||||||||| || |||| ||||||||| ||||||||    
T  38877412 agaacattatggcgtcatttgatccatgtagccgaacccacttagtgggataaggcttg 38877354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 39140728 - 39140786
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| |||| |||||||| ||||||| ||||||||| || |||||    
T  39140728 agaacattatggcgtaatttgattcatgtagccgaccccacttagtgggataatgcttg 39140786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 40416554 - 40416632
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtggg 130  Q
    |||||||||||  |||||||||  ||||| ||||||||||||  |||| |||||| | |||| ||||||| ||||||||    
T  40416554 aatgagttggatcgaaatatggtttatgatagaacattatggtgtaatgtgatccctttagccgaccccacttagtggg 40416632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 44751681 - 44751755
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||| | || ||||||||||||| |||| || ||||||||| ||||||||    
T  44751681 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacctcacttagtgggataaggcttg 44751755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 52921277 - 52921351
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| |||||| ||| || | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  52921277 aaatatggtttatgatagaacactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 52921351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 2914191 - 2914134
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||| || | |||||||||||||  |||||| ||||||||| ||||||||    
T  2914191 gaacattatggcgtactttgatccatgtagccaaccccacttagtgggataaggcttg 2914134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 50257767 - 50257840
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    ||||||||  ||||| ||||||||||||  |||| |||||||||||||  |||||| |||||| || |||||||    
T  50257767 aaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaaccccacttagtgagataaggctt 50257840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 4001554 - 4001466
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||  |||| ||| || |||||||||||||  |||||| ||||||||||||||||||    
T  4001554 aatgagttggatccaaatatggtttttgatagaaccctatgacatcatttgatccatgtagccaaccccacttagtgggaaaaggcttg 4001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 6084158 - 6084246
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| |||||| |||| |||||||||||  ||| | || ||||||||| ||||||||    
T  6084158 aatgagttggatcaaaatatggtttatgatagaacaatatggcgtaatttgatccatgtatttgatctcacttagtgggataaggcttg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 9592917 - 9593005
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| || | |||| ||| |||||| |||||| ||| || | || ||||||||||||| ||||||| ||| ||||| ||||||||    
T  9592917 aatgagttagatttaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 9593005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 22090279 - 22090367
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| | | || ||||||||||||| ||||||| | ||||||| ||||||||    
T  22090279 aatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgaccccactaagtgggataaggcttg 22090367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 34444539 - 34444627
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||| | | ||||||||||  |||| ||||| ||||||| ||||||| ||||||||| ||||||||    
T  34444539 aatgagttggatccaaatatggtttataataaaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttg 34444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34792448 - 34792360
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| |||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||| ||||| ||||||||    
T  34792448 aatgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 34792360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 39318312 - 39318399
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| |||||| |||| ||||||||||||| || |||  ||||||||| ||||||||    
T  39318312 aatgagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccga-cccgcttagtgggataaggcttg 39318399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 42539267 - 42539223
Alignment:
Q  96 taatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||||||||  ||||||| ||||||||||||||||||    
T  42539267 taatttgatccatgtagacgaccccacttagtgggaaaaggcttg 42539223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 43481853 - 43481809
Alignment:
Q  96 taatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  43481853 taatttgatccatgtagccgaccccacttagtgggataaggcttg 43481809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 48431498 - 48431410
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| | ||||| ||||| |||| |||||| |||||||||||||| ||||| ||| ||||||||    
T  48431498 aatgagttggatccaaatatggtttgtgataaaacatcatggcttaatttgatccttgtagctgaccccacttagtaggataaggcttg 48431410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 8364709 - 8364826
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||||| |||||||| | ||||||||||||| ||||  ||||| ||||||||||||| |||| ||||||||||||| ||||||    
T  8364709 agagaaactattaagaaagatttagaaattaa-taagttggactgaaacatggtttatgatagaacattatggcgtaatttgatccatgtagccgacccc 8364807  T
Q  121 aattagtgggaaaaggctt 139  Q
      |||||||||||||||||    
T  8364808 gcttagtgggaaaaggctt 8364826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34604 - 34516
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||| ||||    
T  34604 aatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagtgggataagacttg 34516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 31818684 - 31818802
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||| |||||| ||||| |||||||||   || |||||  ||||| ||||||||||| | |||| ||||||||||||| ||||||    
T  31818684 agagaaactattaggaaaggtttggagattaa-tgagttggatcaaagtatggtttatgatagaacattatgtcgtaatttgatccatgtagccgacccc 31818782  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | |||| ||||||| |||||    
T  31818783 acttagcgggaaaaagcttg 31818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 12133971 - 12133913
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||    
T  12133971 agaacattatggcataatctgatccatgtagccgaccccacttagtgagaaaaggcttg 12133913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 30031439 - 30031527
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  ||||| |||||| |||||| |||| ||||||||||||| |||| || ||||||||| ||||||||    
T  30031439 aatgagttggatttaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttg 30031527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 12890772 - 12890846
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| |||||| |||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  12890772 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 12890846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 9593837 - 9593721
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||||| || || ||| |||||||||||    |||||||  ||||| ||||||||||||  |||| |||||||| ||||||||| |    
T  9593837 agagaaactattaggaaagacttagagatt-aatgagttggatcccaatatggtttatgatagaacattatgg--taatttgatccatatagctgaccac 9593741  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||| | ||||||||    
T  9593740 acttagtggcataaggcttg 9593721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 9706953 - 9707041
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||||| || ||||||||||||| ||||||| ||||||||| ||||||||    
T  9706953 aatgagttggatccaaatatggtttttgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 9707041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 21089604 - 21089668
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||||||||||||  | ||||||||||||||| ||||| ||||||||| ||||||||    
T  21089604 tatgatagaacattatggcattgtttgatccatgtagctgcccccacttagtgggataaggcttg 21089668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34934929 - 34934841
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  34934929 aatgagttggatccaaatttggtgtatgatagaacactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttg 34934841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 5095987 - 5096101
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||| ||||||||||||| |   || |||||||||||   ||||||||  ||||| ||||||||||||| |||| ||||| ||||||| || |||    
T  5095987 agagaaactcttaggaaagatttagtggtt-aatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatccc 5096085  T
Q  121 aattagtgggaaaagg 136  Q
    | ||||||||| ||||    
T  5096086 acttagtgggataagg 5096101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 655523 - 655414
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||  ||| || ||||| ||| |||||| |||||||||  ||||| |||||||| |||   ||| |||||||||||| ||||| |    
T  655523 agagaaactattaggaaaactttcgagattaa-tgaattggaccgaaatatggtttatgacagaacattgtggtgcaatttgatccatgtaggtgacctc 655425  T
Q  121 aattagtggga 131  Q
    | |||||||||    
T  655424 acttagtggga 655414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 1911573 - 1911623
Alignment:
Q  62 actgaaatatggcgtatgaaagaacattatggcataatatgatccatgtag 112  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||||    
T  1911573 actgaaatatggtgtatgatagaacattatggcgtaatttgatccatgtag 1911623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 28085559 - 28085647
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||  | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  28085559 aatgagttggatccaaatttggtgtatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28085647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 31819014 - 31819102
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| || |||||    
T  31819014 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataatgcttg 31819102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 1008120 - 1008063
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| ||||||| |||||  |||||| ||||||||||||||||||    
T  1008120 agaacattatggcgtaatttgatccaggtagca-accccacttagtgggaaaaggcttg 1008063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 3210607 - 3210541
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacc 118  Q
    |||||||||||  ||||||||   ||||| ||||||||||||  |||| ||||||||||||||||||    
T  3210607 aatgagttggatggaaatatgagttatgatagaacattatggtgtaatttgatccatgtagctgacc 3210541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 5897615 - 5897728
Alignment:
Q  26 aactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatta 125  Q
    ||||||||| |||||||| || ||||| || ||||||   ||||||||  ||||  |||| |||||| | |||| ||||||||||||| || |||| |||    
T  5897615 aactattagaaaagatttagatattaa-tgtgttggatcaaaatatggtatatggtagaatattatgacgtaatttgatccatgtagcggatcccactta 5897713  T
Q  126 gtgggaaaaggcttg 140  Q
    |||||| ||||||||    
T  5897714 gtgggataaggcttg 5897728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 7513076 - 7513010
Alignment:
Q  65 gaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    |||||||||  ||||| ||||||||||| | |||| ||||| |||||| |||||||| |||||||||    
T  7513076 gaaatatggtttatgatagaacattatgacgtaatttgatctatgtagttgaccccacttagtggga 7513010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 6293519 - 6293403
Alignment:
Q  23 agaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaa 122  Q
    |||||||||||||||| || | || ||| |||||||| ||  |||||||||  ||||| ||| ||||||||||   | || || ||||||| |||||||     
T  6293519 agaaactattaggaaatatctagatatt-aatgagttagatagaaatatggtatatgatagagcattatggcaacgtttggtcaatgtagccgaccccac 6293421  T
Q  123 ttagtgggaaaaggcttg 140  Q
    ||||||||| ||||||||    
T  6293420 ttagtgggataaggcttg 6293403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34143864 - 34143776
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||  ||||||| ||| ||||| ||||||||    
T  34143864 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttg 34143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34156480 - 34156392
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||  ||||||| ||| ||||| ||||||||    
T  34156480 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttg 34156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 79662 - 79784
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||| ||||||||| | |||| ||| ||||||||| | || | |||||||||||||     
T  79662 tatcagataaactattaggaatgatttggaaattaa-tgagctggaccgaaatatggtgcatgatagaccattatggcgtgatttcatccatgtagctgg 79760  T
Q  117 ccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||||||||    
T  79761 ccccacttagtgggaaaaggcttg 79784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 6788216 - 6788331
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    ||||| || ||||||||||||||| ||||||||||| |||||||||||||||||||   ||||| |||||||||| || |||| |||| |||||||| ||    
T  6788216 tatcaaaggaactattaggaaagacttggaaattaa-tgagttggactgaaatatgatttatgatagaacattatagcgtaatttgattcatgtagccga 6788314  T
Q  117 ccccaattagtgggaaa 133  Q
    || || ||||| |||||    
T  6788315 cctcacttagtaggaaa 6788331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 38830504 - 38830586
Alignment:
Q  53 atgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaagg 136  Q
    ||||||||||| ||||||||  |||||| |||||||||| || |||| ||||||||||||||||||||| ||||||||||||||    
T  38830504 atgagttggaccgaaatatgatgtatgatagaacattatagcgtaat-tgatccatgtagctgaccccacttagtgggaaaagg 38830586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 9235200 - 9235316
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||| | || ||||| |||| ||||  |||||||||  ||||| |||||||||||||||||| ||||||||||||| || |||    
T  9235200 agagaaactattaagaaagatatagagattaa-tgagctggatcgaaatatggtttatgatagaacattatggcataatttgatccatgtagccga-ccc 9235297  T
Q  121 aattagtgggaaaaggctt 139  Q
    | ||||||||| |||||||    
T  9235298 acttagtgggataaggctt 9235316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 43035135 - 43035206
Alignment:
Q  22 gagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggc 94  Q
    ||||||||||||||||| ||||||||||| | |||||||||| ||||||||| |||||| |||||||||||||    
T  43035135 gagaaactattaggaaaaatttggaaattta-tgagttggaccgaaatatggtgtatgatagaacattatggc 43035206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 6859534 - 6859652
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||||||||||||  | ||||  | | |||| |  ||||||||  ||||| |||||||||||||||||| | |||||||| |||||||||    
T  6859534 agagaaactattaggaaagatttacagattagtt-acttgggccaaaatatggtttatgatagaacattatggcataattttatccatgttgctgacccc 6859632  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  6859633 acttagtgggataaggcttg 6859652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 5558338 - 5558412
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| |||||| ||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  5558338 aaatatggtttatgatagaacactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttg 5558412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 4496567 - 4496655
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||||| || ||||||||||||| ||||||| ||||||||| ||||||||    
T  4496567 aatgagttggatccaaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 4496655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 11675682 - 11675801
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactg-aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccc 119  Q
    |||||||||||||||| |||||| || ||||| ||||||||| |  ||||||||  ||||| ||||||||||||| || | | ||||||||||| |||||    
T  11675682 agagaaactattaggacagatttagagattaa-tgagttggattttaaatatggtttatgatagaacattatggcgtagtttaatccatgtagccgaccc 11675780  T
Q  120 caattagtgggaaaaggcttg 140  Q
    || ||||| ||| ||||||||    
T  11675781 cacttagttggataaggcttg 11675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 6889146 - 6889240
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    ||||||||||||||||||||||| || ||||| | |||||| |  ||||||||  ||||| ||||||||||||| |||| | ||||||||||||||    
T  6889146 agagaaactattaggaaagatttagagattaatt-agttgggccaaaatatggtttatgatagaacattatggcgtaatttaatccatgtagctga 6889240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 418158 - 418045
Alignment:
Q  26 aactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatta 125  Q
    |||| ||||||||||||| || ||||| |||||||||   |||| |||  ||||| ||||||||||||| |||| ||||||||||||| ||||||| ||     
T  418158 aacttttaggaaagatttagagattaa-tgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttg 418060  T
Q  126 gtgggaaaaggcttg 140  Q
    |||||| | ||||||    
T  418059 gtgggatatggcttg 418045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 18855804 - 18855878
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| |||||||||| ||||||| ||||||||||||| ||||||| ||||||||| ||| ||||    
T  18855804 aaatatggtttatgatagaacattatagcataatttgatccatgtagccgaccccacttagtgggataagacttg 18855878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 20456979 - 20457044
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| ||||||||||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  20456979 gtatgatagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 20457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 29816565 - 29816653
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  29816565 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29816653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 30213758 - 30213846
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  30213758 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 38132543 - 38132607
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| |||||||||| || ||||||| ||||||||| ||||||||    
T  38132543 tatgatagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttg 38132607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 38685150 - 38685238
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  38685150 aatgagttggatccaaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 38685238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 42272690 - 42272746
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||| ||||||    
T  42272690 agaacattatggcgtcatttgatccatgtagctgaccccacttagtgggataaggct 42272746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 28035 - 28140
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| ||  |||| | |||||||   |||||||   | ||| |||||| ||||||||||| |||| |||||||||||||||    
T  28035 agagaaactattaggaaagatttagaggttaa-taagttggatccaaatatgatttctgatagaacactatggcataatttgatacatgtagctgacccc 28133  T
Q  121 aattagt 127  Q
    | |||||    
T  28134 atttagt 28140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 27386554 - 27386608
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggc 137  Q
    |||||||||||| |||| ||||||||||||| ||||||| ||||||||| |||||    
T  27386554 gaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggc 27386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 28985296 - 28985354
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||| || |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  28985296 agaacattatagcttaatttgatccatgtagccgaccccacttagtgggacaaggcttg 28985354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 42576216 - 42576281
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| ||||||| ||||| |||| ||||||||||||| ||||| | ||||||||| ||||||||    
T  42576216 gtatgatagaacataatggcgtaatttgatccatgtagccgacccgacttagtgggataaggcttg 42576281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 43557947 - 43557847
Alignment:
Q  36 aaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaag 135  Q
    ||||||||||| ||||  |||||||||  |||||||||  ||||| ||||||||||| | |||  ||||| ||||||| ||||||| ||||||||| |||    
T  43557947 aaagatttggagattat-tgagttggatcgaaatatggtttatgatagaacattatgacttaagttgatctatgtagccgaccccacttagtgggataag 43557849  T
Q  136 gc 137  Q
    ||    
T  43557848 gc 43557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 2915571 - 2915507
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  2915571 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 2915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 7359328 - 7359272
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||| | |||| ||||||||||||||||||||| ||||||||| ||| ||||    
T  7359328 aacattatgacgtaatttgatccatgtagctgaccccacttagtgggacaagacttg 7359272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 10639485 - 10639573
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| || |||||| ||||||||    
T  10639485 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactttgtgggataaggcttg 10639573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 11069237 - 11069173
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| |||||||| ||||||||||||  |||||||| | ||||||    
T  11069237 tatgatagaacattatggcgtaatttgatccatatagctgaccccacatagtgggatatggcttg 11069173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 12492483 - 12492395
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || |||| |||||||| ||||||| ||||||||| ||||||||    
T  12492483 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttg 12492395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 28976958 - 28976870
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || |||| |||||||| ||||||| ||||||||| ||||||||    
T  28976958 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttg 28976870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 29922437 - 29922528
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagc 113  Q
    ||||||||||||| ||||||||| || |||||   |||||||||||||  |||  || || ||||||||||||| |||| |||||||||||||    
T  29922437 agagaaactattaagaaagatttagagattaaca-agttggactgaaacctggtttacgatagaacattatggcgtaatttgatccatgtagc 29922528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 9234102 - 9234157
Alignment:
Q  85 acattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||| |||||| ||||||||||| | ||||||| ||||||||| ||||||||    
T  9234102 acattatgacataatttgatccatgtaaccgaccccacttagtgggataaggcttg 9234157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 30588630 - 30588709
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    |||||||||||  |||||||||  ||| | ||||||||||| | | |||||||||||||||| ||| ||| |||||||||    
T  30588630 aatgagttggatcgaaatatggtttataatagaacattatgacgtgatatgatccatgtagccgactccacttagtggga 30588709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 41108795 - 41108752
Alignment:
Q  85 acattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||    
T  41108795 acattatggcgtaatttgatccatgtagctgaccccacttagtg 41108752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 12534425 - 12534483
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||| |||||||| ||| |||||||| ||||||||| | ||||||    
T  12534425 agaacattatggcgtaatttgatccatttagttgaccccagttagtgggatacggcttg 12534483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 13561455 - 13561397
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  13561455 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 13561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 27800041 - 27800099
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||| ||||| |||| ||||||||  |||||| ||||||||| ||||||||    
T  27800041 agaacattatggtataatttgatacatgtagccaaccccacttagtgggataaggcttg 27800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 32442194 - 32442145
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    ||||||||||||| |||| ||||||||||||| ||| ||| |||||||||    
T  32442194 agaacattatggcgtaatttgatccatgtagccgactccacttagtggga 32442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 41200421 - 41200360
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggc 137  Q
    ||||| ||||| ||||||||| || |||||||||||||  |||||| ||||||||| |||||    
T  41200421 tatgatagaacgttatggcatcatttgatccatgtagcctaccccacttagtgggataaggc 41200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 43423563 - 43423506
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||| |||| |||||||||||||  |||||  ||||||||| ||||||||    
T  43423563 gaacattatggcgtaatttgatccatgtagccaaccccttttagtgggataaggcttg 43423506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 1287678 - 1287590
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| || ||| |||||| | |  ||||||||||||| ||||||| ||||||||| ||||||||    
T  1287678 aatgagttggatccaaatttggtgtatgatagtacactatggcgtcagttgatccatgtagccgaccccacttagtgggataaggcttg 1287590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 3302027 - 3302115
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| || ||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  3302027 aatgagttggatccaaatatggtttttgatagaacactacggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 3302115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 8082034 - 8081974
Alignment:
Q  81 aagaacattatggcataatatgatccatgtagctga-ccccaattagtgggaaaaggcttg 140  Q
    |||||||||||| ||| || ||||||||||||| || ||||| ||||||||| ||||||||    
T  8082034 aagaacattatgacatgatttgatccatgtagccgacccccacttagtgggataaggcttg 8081974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 14667954 - 14668042
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   || |||||  ||||| ||||||||||||  |||| ||||||||||| | ||||||| ||||||||| ||| ||||    
T  14667954 aatgagttggatccaagtatggtttatgatagaacattatggtgtaatttgatccatgtaaccgaccccacttagtgggataagacttg 14668042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 160453 - 160335
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||  |||||||| |||||| ||| |||||||||  ||||| ||||||||||||| |||| |||  ||||||||  |||||    
T  160453 agagaaactattaggaaagattaagaaattaa-tgagttcgaccgaaatatggtttatgatagaacattatggcgtaatttgaatcatgtagccaacccc 160355  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||||||||||||    
T  160354 acttagtgggaaaaggcttg 160335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 38135342 - 38135224
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||  |||||||| || ||||| |||||||||| |||||||||  ||||| |||| |||||||| |||| |||||||| |||||||||||    
T  38135342 agagaaactattaaaaaagatttagagattaa-tgagttggaccgaaatatgggttatgatagaatattatggcgtaatttgatccatctagctgacccc 38135244  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | || |||||| ||||||||    
T  38135243 acttggtgggacaaggcttg 38135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 28628062 - 28627945
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| || ||||| |||||||||   |||| |||  ||||| ||||||||||||| |||| ||||||||||||| ||| ||    
T  28628062 agagaaactattaggaaagatttagagattaa-tgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgactcc 28627964  T
Q  121 aattagtgggaaaaggctt 139  Q
    | ||||||||| |||||||    
T  28627963 acttagtgggataaggctt 28627945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 40391952 - 40391845
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||| |||||| ||||| |||||||| | |||||||| |||||||||| ||||| ||||||||||||| |||| |||||||| || | ||||||    
T  40391952 agagaaactagtaggaatgatttagaaattaa-taagttggaccgaaatatggcttatgatagaacattatggcgtaatttgatccatctaaccgacccc 40391854  T
Q  121 aattagtgg 129  Q
    | |||||||    
T  40391853 acttagtgg 40391845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 2882861 - 2882747
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    ||||||||||||||  |||||||||||| |||||||||  |||| ||||  ||||| ||||||||||||| |||| ||||| || ||||||||| || ||    
T  2882861 aaactattaggaaacctttggaaattaa-tgagttggatcgaaacatggtttatgatagaacattatggcgtaatttgatctatttagctgacctcactt 2882763  T
Q  125 agtgggaaaaggcttg 140  Q
    |||| |||||||||||    
T  2882762 agtgagaaaaggcttg 2882747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 9210833 - 9210716
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||| |||||||| |||| ||  |||| |||||||||   ||||||||  ||||| | ||||||||||| |||| ||||||||||||||||||||    
T  9210833 agagaaacttttaggaaaaatttagaggttaa-tgagttggatccaaatatggtttatgatacaacattatggcgtaatttgatccatgtagctgacccc 9210735  T
Q  121 aattagtgggaaaaggctt 139  Q
    | ||||||||| |||||||    
T  9210734 acttagtgggataaggctt 9210716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 26742019 - 26741934
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgta 111  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||  ||||| ||||||||||||| |||| ||||| |||||    
T  26742019 aaactattaggaaatatttggaaat-aaatgagttggaccgaaatatggtttatgatagaacattatggcgtaatttgatcaatgta 26741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 47796281 - 47796168
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||| |||||||||||||||| |||||||| | ||||||||||||||||||  ||||| |||| |||||||| |||| ||||||||| ||| || |||    
T  47796281 agagaacctattaggaaagatttagaaattaa-taagttggactgaaatatggtttatgatagaatattatggcgtaatttgatccatgcagccgatccc 47796183  T
Q  121 aattagtgggaaaag 135  Q
      ||||| |||||||    
T  47796182 gcttagtcggaaaag 47796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 27893688 - 27893574
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    ||||||||| ||||||||| || ||||| |||| ||||| ||||||||   ||||| |||||||||||||||||| |||| |||||||| ||||| | ||    
T  27893688 aaactattaagaaagatttagagattaa-tgagctggaccgaaatatgttttatgatagaacattatggcataatttgattcatgtagccgaccctactt 27893590  T
Q  125 agtgggaaaaggcttg 140  Q
    |||| || ||||||||    
T  27893589 agtgcgataaggcttg 27893574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 40980057 - 40979939
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||||||| |||||||| | |  | |||||||||||   ||||||||  ||||| |||||| |||||| |||| ||||||||||||| ||||||    
T  40980057 agagaaactattagaaaagatttag-aggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacccc 40979959  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  40979958 acttagtgggataaggcttg 40979939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 2885821 - 2885733
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||  ||||||||  ||||| |||||| |||||  |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  2885821 aatgagttggacccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 2885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 31681119 - 31681031
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||| ||||| |||| | |||| | |||| ||||||||||||| ||||||| ||||||||||||||||||    
T  31681119 aatgagttggatccaaatatggcttatgatagaatactatgacgtaatttgatccatgtagccgaccccacttagtgggaaaaggcttg 31681031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34341494 - 34341406
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||| |||| ||| | ||||||| ||||||| ||||||| | ||||||||    
T  34341494 aatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgaccaatgtagccgaccccatttagtggaataaggcttg 34341406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 36101876 - 36101788
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| ||||||||||| | |||| |||||||||||| |||||||| ||||||||| ||||||||    
T  36101876 aatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgaccccacttagtgggataaggcttg 36101788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 14057631 - 14057748
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| ||  |||| || ||| || | ||||||||  ||||| ||||||||||||  |||| |||||||||||||  |||||    
T  14057631 agagaaactattaggaaagatttagaggttaa-tgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccatgtagccaacccc 14057729  T
Q  121 aattagtgggaaaaggctt 139  Q
    | ||||| ||| |||||||    
T  14057730 acttagtaggataaggctt 14057748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 14367659 - 14367776
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| ||  |||| || ||| || | ||||||||  ||||| ||||||||||||  |||| |||||||||||||  |||||    
T  14367659 agagaaactattaggaaagatttagaggttaa-tgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccatgtagccaacccc 14367757  T
Q  121 aattagtgggaaaaggctt 139  Q
    | ||||| ||| |||||||    
T  14367758 acttagtaggataaggctt 14367776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 6263477 - 6263530
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  6263477 attatggcataatttgatccatgtagccgaccccacttagtgggataaggcttg 6263530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 11594143 - 11594231
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  11594143 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 11594231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 28542069 - 28541954
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga-ccccaat 123  Q
    ||||||||| ||||||||| || ||||| ||||||||| |||| |||||  ||||| ||||||| |||||||| | |||||| |||||| || ||||| |    
T  28542069 aaactattaagaaagatttagagattaa-tgagttggattgaactatggtttatgatagaacatcatggcatagtttgatccgtgtagccgacccccact 28541971  T
Q  124 tagtgggaaaaggcttg 140  Q
    |||| ||| ||||||||    
T  28541970 tagttggataaggcttg 28541954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 28708596 - 28708652
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  28708596 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 28708652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 34869603 - 34869691
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||| ||||||||||| ||||||||    
T  34869603 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttg 34869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 35906300 - 35906212
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  35906300 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 35906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 47852270 - 47852358
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||| | ||||||||||||| |||| ||||||||||||| ||||||| |||| |||| ||||||||    
T  47852270 aatgagttggatccaaatgtggtgtatcatagaacattatggcgtaatttgatccatgtagccgaccccacttagggggataaggcttg 47852358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 42187594 - 42187711
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacatt-atggcataatatgatccatgtagctgaccc 119  Q
    |||||||||||||||||| |||| || ||||| | |||||||   |||| |||  ||||| |||||||| ||||| |||| ||||||||||||| |||||    
T  42187594 agagaaactattaggaaatatttagagattaatt-agttggatccaaat-tggtttatgatagaacatttatggcgtaatttgatccatgtagccgaccc 42187691  T
Q  120 caattagtgggaaaaggctt 139  Q
    || ||||||||| |||||||    
T  42187692 cacttagtgggataaggctt 42187711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 42969881 - 42969968
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    |||||||||||   ||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||||||| ||||||||| |||||||    
T  42969881 aatgagttggatccaaatatggtttatgattgaacattatcgtataatttgatccatgtagccgaccccacttagtgggataaggctt 42969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 28208413 - 28208339
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  28208413 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28208339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 39906457 - 39906383
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  39906457 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 39906383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 45836581 - 45836495
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    |||||||||||   ||||||||  ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||    
T  45836581 aatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 45836495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 6375074 - 6375139
Alignment:
Q  75 gtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  6375074 gtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 6375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 7273283 - 7273371
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  ||||| | | || |||| | |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  7273283 aatgagttggattcaaatatggtttatgatatagcactatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 7273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 12841350 - 12841286
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  12841350 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12841286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 21078100 - 21078188
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| ||||||||||||| | || ||||||||||||| |||  || ||||||||| ||||||||    
T  21078100 aatgagttggatccaaatttggtgtatgatagaacattatggcgtcatttgatccatgtagccgacttcatttagtgggataaggcttg 21078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 27648963 - 27649051
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| |||  ||||| |||||| | |||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  27648963 aatgagttggatccaaatttggtttatgatagaacactgtggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 27649051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 30814200 - 30814136
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||  | |||| ||||||||||||| ||||||| |||||||||| |||||||    
T  30814200 tatgatagaacattatcacgtaatttgatccatgtagccgaccccacttagtgggaagaggcttg 30814136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 31682677 - 31682613
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  31682677 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31682613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 36239925 - 36239834
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagc 113  Q
    |||||||||||||||||| |||| || |||||  ||||||||   |||||||   ||||| ||||||||||||| |||| |||||||||||||    
T  36239925 agagaaactattaggaaaaatttagagattaac-gagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccatgtagc 36239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 36652189 - 36652261
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||    
T  36652189 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 36652261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 43281857 - 43281945
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  43281857 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttg 43281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 46355955 - 46355867
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| ||| || ||||||||||||| ||||||| |||||| || ||||||||    
T  46355955 aatgagttggatccaaatctggtgtatgatagaacactatgccatcatttgatccatgtagccgaccccacttagtgagataaggcttg 46355867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 40149141 - 40149024
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||||| ||||||||| ||||| |  || ||||||||||  ||||||||  ||||| |||||||||||||  ||| ||||| ||||||| ||  ||    
T  40149141 agagaaactactaggaaagacttggagagcaa-tgagttggaccaaaatatggt-tatgatagaacattatggcgcaatttgatctatgtagccgaatcc 40149044  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  40149043 acttagtgggataaggcttg 40149024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 40630666 - 40630705
Alignment:
Q  101 tgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  40630666 tgatccatgtagccgaccccacttagtgggaaaaggcttg 40630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 45601629 - 45601747
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    |||||||| |||| ||||||| | || ||||| |||||||||   |||||||   ||||| |||||| |||||  |||| |||||||||||||||| | |    
T  45601629 agagaaaccattaagaaagatctagagattaa-tgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtagctgaactc 45601727  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  45601728 acttagtgggataaggcttg 45601747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 1011259 - 1011317
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||  |||| ||||| ||||||| ||||||| ||||||||| ||||||||    
T  1011259 agaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttg 1011317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 37618142 - 37618216
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||  | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  37618142 aaatttggtgtatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 37618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 47652760 - 47652818
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||  |||||| |||||| ||||||| ||||||||| ||||||||    
T  47652760 agaacattatggcgtaacttgatccctgtagccgaccccacttagtgggataaggcttg 47652818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 27021794 - 27021745
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtggga 131  Q
    |||||||||||||| ||| |||||||||| || ||||||| |||||||||    
T  27021794 agaacattatggcacaatttgatccatgttgccgaccccacttagtggga 27021745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 4604754 - 4604818
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| || | |||||||||||||  |||||| ||||||||| ||| ||||    
T  4604754 tatgatagaacattatggcgtactttgatccatgtagccaaccccacttagtgggataagacttg 4604818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 5418293 - 5418345
Alignment:
Q  88 ttatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||| |||| ||||||||||||  ||||||| ||||||||| ||||||||    
T  5418293 ttatggcgtaatttgatccatgtagtcgaccccatttagtgggataaggcttg 5418345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 20158726 - 20158682
Alignment:
Q  96 taatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||||||||||||||| | ||||||||| ||||||||    
T  20158726 taatttgatccatgtagctgaccctacttagtgggataaggcttg 20158682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 33732030 - 33732103
Alignment:
Q  65 gaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||  ||||| ||||||||||||||  || ||||||||||||| |  |||| ||||||||| ||||||||    
T  33732030 gaaatatggtttatgatagaacattatggca--atttgatccatgtagccggtcccacttagtgggataaggcttg 33732103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34035253 - 34035165
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||   |||| |||||| |||||| | || ||||||||||||| ||||||| |||||||||  |||||||    
T  34035253 aatgagttggatccaaatatggttcatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggattaggcttg 34035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 45841046 - 45841018
Alignment:
Q  101 tgatccatgtagctgaccccaattagtgg 129  Q
    |||||||||||||||||||||||||||||    
T  45841046 tgatccatgtagctgaccccaattagtgg 45841018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 56439704 - 56439583
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||  |||||||||  ||||| |||||||||| || |||| | |||||| ||||  |    
T  56439704 tatcagagaaactattatgaaagatttggaaatt-aattagttggatcgaaatatggtttatgatagaacattatagcgtaatttaatccatatagccaa 56439606  T
Q  117 ccccaattagtgggaaaaggctt 139  Q
    ||||| |||||| ||||||||||    
T  56439605 ccccacttagtgcgaaaaggctt 56439583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 21945771 - 21945701
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacat 88  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  21945771 tatcatagaaactattaggaaagatttggaaatt-aatgagttggactgaaatatggtttatgatagaacat 21945701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 53540447 - 53540561
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    |||||||||||||||| ||||| ||||| ||||||||||  ||||||||  ||||| |||||||||||||||||| |||||||| ||||  |||||| |     
T  53540447 aaactattaggaaagacttggagattaa-tgagttggacaaaaatatggtttatgatagaacattatggcataatttgatccatatagccaaccccactg 53540545  T
Q  125 agtgggaaaaggcttg 140  Q
    ||||||| ||| ||||    
T  53540546 agtgggataagacttg 53540561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 55007907 - 55008017
Alignment:
Q  29 tattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtg 128  Q
    ||||| ||||||||| || ||||| |||||||||| |||||||||  ||||| ||| ||||||| | |||| ||||||||||||| ||||||| ||||||    
T  55007907 tattaagaaagatttagagattaa-tgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtg 55008005  T
Q  129 ggaaaaggcttg 140  Q
    ||| ||||||||    
T  55008006 ggataaggcttg 55008017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 29398990 - 29399075
Alignment:
Q  55 gagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||  |||||| ||  ||||| ||||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  29398990 gagttggaacgaaataaggtttatgatagaacattatggcgtaatttgattcatgtagctgaccccacttagtgggaaaaggcttg 29399075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 13805394 - 13805276
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||| | ||||||||| || | ||| | |||||||| |||||||||  ||||| |||||||||||| ||||| |||||||||||||  |||||    
T  13805394 agagaaactatgaagaaagattttgagagtaa-taagttggacggaaatatggtttatgatagaacattatgggataatttgatccatgtagccaacccc 13805296  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| | ||||||    
T  13805295 acttagtgggatatggcttg 13805276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 25574982 - 25575095
Alignment:
Q  26 aactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatta 125  Q
    |||||||| ||||||| | || ||||| |||||||||  |||||||||  ||||| |||||||| |||  |||| ||||||||||||| ||||||| |||    
T  25574982 aactattaagaaagatctagagattaa-tgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccattta 25575080  T
Q  126 gtgggaaaaggcttg 140  Q
    |||||| ||||||||    
T  25575081 gtgggataaggcttg 25575095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 23906396 - 23906308
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||||||||||| ||||||||| ||||||||    
T  23906396 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttg 23906308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 51438628 - 51438716
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| ||||||||||  ||| | | ||||||||||| |||| ||||||||||||||||||| | || |||||| ||||||||    
T  51438628 aatgagttggaatgaaatatggtttataatataacattatggcgtaatttgatccatgtagctgacccaactttgtgggataaggcttg 51438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 26037634 - 26037520
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| | |  | |||||||||||   ||||||||  ||||| |||||| |||||| ||||  |||||||||||| ||||||    
T  26037634 agagaaactattaggaaagatttag-aggtgaatgagttggatccaaatatggtttatgatagaacactatggcgtaattggatccatgtagccgacccc 26037536  T
Q  121 aattagtgggaaaagg 136  Q
    | ||||||||| ||||    
T  26037535 acttagtgggataagg 26037520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 31043225 - 31043331
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| || ||||| |||||||||   ||||||||  | ||| |||||| ||| ||||||| |||||| || ||||||||||    
T  31043225 agagaaactattaggaaagatttagagattaa-tgagttggatccaaatatggtttgtgatagaacactattgcataatttgatccttgcagctgacccc 31043323  T
Q  121 aattagtg 128  Q
    | ||||||    
T  31043324 acttagtg 31043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 436426 - 436500
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||||| || ||||||||||||| ||||||| ||||||||| ||||||||    
T  436426 aaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 436500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 30621330 - 30621241
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgta 111  Q
    ||||||||||||| ||||||||| || ||||| || ||||||| |||||||||  ||||| ||||||||||||| |||  |||||||||||    
T  30621330 agagaaactattaagaaagatttagagattaa-tgtgttggaccgaaatatggtttatgatagaacattatggcttaacttgatccatgta 30621241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 39100605 - 39100547
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||| |||||| ||||||||||| ||||||| ||||||||| ||||||||    
T  39100605 agaacattatggcgtaatataatccatgtagccgaccccacttagtgggataaggcttg 39100547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 12443290 - 12443366
Alignment:
Q  64 tgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||  ||||| |||||||||||||||||| ||||||||||||| || ||||| | || ||| ||||||||    
T  12443290 tgaaatatggtttatgatagaacattatggcataatttgatccatgtagccgatcccaaatcgtaggataaggcttg 12443366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 31959913 - 31959825
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  31959913 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31959825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 35690478 - 35690542
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||| ||||    
T  35690478 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttg 35690542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 48174192 - 48174104
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| | ||||||||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  48174192 aatgagttggatccaaatttggtgtatgataaaacattatggcgtcatttgatccatgtagcagaccccacttagtgggataaggcttg 48174104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 52569614 - 52569526
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  52569614 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 52569526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 4441036 - 4441123
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| |||||||    
T  4441036 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 13296586 - 13296704
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||| ||||||||  |||||||||||||||| |||||||||| |||||| || |||||    |||||||| || |||| |||| |||| ||| |||| |    
T  13296586 agagatactattagacaagatttggaaattaa-tgagttggaccgaaatacggtgtatggttaaacattatagcgtaatttgatgcatgcagccgacctc 13296684  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | |||||||||||| |||||    
T  13296685 acttagtgggaaaatgcttg 13296704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 31459151 - 31459265
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    ||||||||||||||||||| || ||||| |||||||||    ||||||| || |||  ||||||||||||  ||  ||||||||||| | ||||||| ||    
T  31459151 aaactattaggaaagatttagagattaa-tgagttggatcccaatatggtgtgtgattgaacattatggcggaacttgatccatgtacccgaccccactt 31459249  T
Q  125 agtgggaaaaggcttg 140  Q
    ||||||| ||||||||    
T  31459250 agtgggataaggcttg 31459265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 36255596 - 36255533
Alignment:
Q  77 atgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||||||||  |||| |||||||||| || ||||||| ||||||||||||||||||    
T  36255596 atgatagaacattatggtgtaatttgatccatgtggccgaccccacttagtgggaaaaggcttg 36255533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 26024978 - 26024861
Alignment:
Q  22 gagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccca 121  Q
    |||||||||||| ||||||| | || ||||| |||||||||  || | ||||  ||||| ||||||||||||  |||| | ||||||||||| |||| ||    
T  26024978 gagaaactattaagaaagatctagagattaa-tgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccgacctca 26024880  T
Q  122 attagtgggaaaaggcttg 140  Q
     ||||||||| ||||||||    
T  26024879 cttagtgggataaggcttg 26024861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 51176787 - 51176845
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||||||||| ||||||||||||| |||| || |||||||  |||||||||    
T  51176787 agaacattatggcataatttgatccatgtagcggaccacacttagtggtgaaaggcttg 51176845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 15665319 - 15665372
Alignment:
Q  87 attatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||| ||||||||||||||||||||| ||||||||| ||||||||    
T  15665319 attacggcgtaatttgatccatgtagctgaccccacttagtgggataaggcttg 15665372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 1777116 - 1777028
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||| ||||| ||||||||    
T  1777116 aatgagttggatccaaatttggtgtatgatagaacagtatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 1777028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5306479 - 5306567
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| | ||||||||||| |||| |||||||| ||||| |||||| || |||||| ||||||||    
T  5306479 aatgagttggatccaaatatggtttatgacataacattatggcgtaatttgatccatatagctaaccccacttggtgggataaggcttg 5306567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 15661939 - 15661887
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaagg 136  Q
    ||||||||||| |||| ||||||||||||| ||||||| ||||||||| ||||    
T  15661939 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagg 15661887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 19154962 - 19154874
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| |||  ||||| |||||| |||||| | || ||||||||| ||||||||||| ||||||||| ||||||||    
T  19154962 aatgagttggatccaaatttggtttatgatagaacactatggcgttatttgatccatgcagctgaccccacttagtgggataaggcttg 19154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 20105616 - 20105556
Alignment:
Q  53 atgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagc 113  Q
    |||||||||||||||||||||  ||||| || |||||||||| | || |||||||||||||    
T  20105616 atgagttggactgaaatatggtatatgataggacattatggcgtcatttgatccatgtagc 20105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 28467651 - 28467703
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaa 134  Q
    ||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||    
T  28467651 agaacattatggcgtaatttgatccatgtagcggaccccgcttagtgggaaaa 28467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 32479221 - 32479309
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  | ||| |||||| |||||| | || ||||||||||||| ||||||| ||||||| ||||||||||    
T  32479221 aatgagttggatcaaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtggaaaaaggcttg 32479309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 45209280 - 45209216
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||| |||||||| || | ||||||||||||| ||||||| ||||||||| ||||||||    
T  45209280 tatgatagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttg 45209216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 55388333 - 55388222
Alignment:
Q  28 ctattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagt 127  Q
    |||||| |||||||||||| ||| |||||||| ||  ||||||||   ||||| |||||||| |||  |||| |||||||||| |  ||||||| |||||    
T  55388333 ctattaagaaagatttggagatt-aatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagt 55388235  T
Q  128 gggaaaaggcttg 140  Q
    |||| ||||||||    
T  55388234 gggataaggcttg 55388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 1095633 - 1095716
Alignment:
Q  57 gttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| ||||||||||  ||||| ||||||||||||| | || ||||| ||||| | ||||||  ||||||||| ||||||||    
T  1095633 gttggattgaaatatggtttatgatagaacattatggcgttatttgatcgatgtacccgaccccgtttagtgggataaggcttg 1095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 19062017 - 19061946
Alignment:
Q  69 tatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||| |||||| |||||| | || ||||||||||||| |||||||  |||||||| ||||||||    
T  19062017 tatggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacctagtgggataaggcttg 19061946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 37488244 - 37488362
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||| ||||||| | |||||||| | |||| ||   ||||||||   |||| ||| ||||||||| |||| |||||||||||||   ||||    
T  37488244 agagaaactattaagaaagatctagaaattaa-taagtttgatcaaaatatggttaatgatagagcattatggcgtaatttgatccatgtagccagcccc 37488342  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  37488343 acttagtgggataaggcttg 37488362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 45204968 - 45204851
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||||||||||||||||| | | || ||| |||||||   ||||||||  ||||| ||||||||| ||| |||| ||||| |||||||  ||||     
T  45204968 agagaaactattaggaaagatttag-agtttaataagttggatccaaatatggtttatgatagaacatta-ggcgtaatttgatctatgtagcccaccca 45204871  T
Q  121 aattagtgggaaaaggcttg 140  Q
    | ||||||||| ||||||||    
T  45204870 acttagtgggataaggcttg 45204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 20863795 - 20863876
Alignment:
Q  24 gaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatcc 106  Q
    ||||||||||| || ||||||| | |||| |||||||||| ||||||||| | |||| |||| |||||||| |||| ||||||    
T  20863795 gaaactattagaaatgatttggtatttaa-tgagttggaccgaaatatggtgaatgatagaatattatggcgtaatttgatcc 20863876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 27450249 - 27450191
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  27450249 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 27450191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 30634167 - 30634117
Alignment:
Q  90 atggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  30634167 atggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 30634117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 48622628 - 48622554
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||| | || | ||||||||||| ||||||| ||||||||| ||||||||    
T  48622628 aaatttggtgtatgatagaacactatggcgtcatttaatccatgtagccgaccccacttagtgggataaggcttg 48622554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 53518448 - 53518344
Alignment:
Q  25 aaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaatt 124  Q
    |||||| |||||||||||| ||  |||| |||||||||   ||||||||  ||||| |||||| |||||| |||| ||||||||| ||| ||||||| ||    
T  53518448 aaactaataggaaagatttagaggttaa-tgagttggatctaaatatggtttatgatagaacactatggcgtaatttgatccatgcagc-gaccccactt 53518351  T
Q  125 agtggga 131  Q
    |||||||    
T  53518350 agtggga 53518344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 34379586 - 34379670
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggc 137  Q
    |||||||||||| |||||||||  ||||| |||| |||||||| |||  |||| |||||||| ||||||| || || |||||||||    
T  34379586 aatgagttggaccgaaatatggtttatgatagaatattatggcgtaacttgat-catgtagccgaccccactttgttggaaaaggc 34379670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 50967127 - 50967050
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgg 129  Q
    ||||||||||| || | |||||  |||||||||| |||||| | |||| ||||||||||||| |||| || |||||||    
T  50967127 aatgagttggaatgcagtatggtatatgaaagaaaattatgtcgtaatttgatccatgtagccgacctcacttagtgg 50967050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 2557801 - 2557682
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattat-ggcataatatgatccatgtagctgaccc 119  Q
    ||||||||||||| ||| ||| || | |||||  ||||||||  |||||||||  ||||| |||||||||| ||  |||| |||||||||||||  || |    
T  2557801 agagaaactattaagaaggatctgaagattaac-gagttggatcgaaatatggtttatgatagaacattattggtgtaatttgatccatgtagccaactc 2557703  T
Q  120 caattagtgggaaaaggcttg 140  Q
    || ||||||||| ||||||||    
T  2557702 catttagtgggataaggcttg 2557682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 7947164 - 7947208
Alignment:
Q  96 taatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  7947164 taatttgatccatgtagccgaccccacttagtgggataaggcttg 7947208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 12494846 - 12494934
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| | | || | ||||||||||| ||||||| ||||||||| ||||||||    
T  12494846 aatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttg 12494934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 21359293 - 21359237
Alignment:
Q  83 gaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    |||||||||||| |||| |||| |||| ||| ||||||| ||||||||| |||||||    
T  21359293 gaacattatggcgtaatttgattcatgcagccgaccccacttagtgggataaggctt 21359237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 21528471 - 21528559
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  | ||| |||||| |||||    || ||||||||||||| ||||||| ||||||||| ||||||||    
T  21528471 aatgagttggattcaaatatggtttttgatagaacactatggtggcatttgatccatgtagccgaccccacttagtgggataaggcttg 21528559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 26275079 - 26275027
Alignment:
Q  88 ttatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||| |||| ||||||||||| | ||||||| ||||| ||||||||||||    
T  26275079 ttatggcctaatttgatccatgtatccgaccccatttagttggaaaaggcttg 26275027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 34585697 - 34585753
Alignment:
Q  84 aacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | || |||||||||||||| | |||| ||||||||| ||||||||    
T  34585697 aacattatggcgtcatttgatccatgtagcttaacccacttagtgggataaggcttg 34585753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 39708616 - 39708704
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   ||||||||  ||||| |||||| |||| | |||| ||||||||||||  ||||||| ||||||||| ||| ||||    
T  39708616 aatgagttggatccaaatatggtttatgatagaacactatgtcgtaatttgatccatgtagtcgaccccacttagtgggataagacttg 39708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 46715330 - 46715278
Alignment:
Q  88 ttatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||||  |||||||||| ||||||||| ||||||||| ||| ||||    
T  46715330 ttatggcataattcgatccatgtaactgaccccacttagtgggataagacttg 46715278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 49738625 - 49738561
Alignment:
Q  76 tatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||| |||||||||||||    | ||||||||||||| ||||||| ||||||||| ||||||||    
T  49738625 tatgacagaacattatggcggtgtttgatccatgtagccgaccccatttagtgggataaggcttg 49738561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 49939803 - 49939747
Alignment:
Q  82 agaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggct 138  Q
    |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||    
T  49939803 agaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 49939747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 50862858 - 50862902
Alignment:
Q  96 taatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||||||    
T  50862858 taatttgatccatgtagccgaccccacttagtgggataaggcttg 50862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 1047 - 959
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||||| | || ||||||||||||||||||||| ||||||||| ||||||||    
T  1047 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagctgaccccatttagtgggataaggcttg 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 6858 - 6783
Alignment:
Q  65 gaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||  ||||| | |||||||||||||||| |||||||||||||  |||||| ||||||||| ||||||||    
T  6858 gaaatatggtatatgatataacattatggcataatttgatccatgtagccaaccccacttagtgggataaggcttg 6783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 58355 - 58238
Alignment:
Q  21 agagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgacccc 120  Q
    ||||||||| |||||||| | ||||| || || ||||||||||  | ||||||  ||||| ||||||||||| | |||| ||||||||||||| |||||     
T  58355 agagaaactgttaggaaaaacttggagatcaa-tgagttggaccaagatatggtttatgatagaacattatgtcgtaatttgatccatgtagccgaccca 58257  T
Q  121 aattagtgggaaaaggctt 139  Q
    | ||||||||| |||||||    
T  58256 acttagtgggataaggctt 58238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 45577 - 45477
Alignment:
Q  17 tatcagagaaactattaggaaagatttggaaattaaatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctga 116  Q
    ||||||||||||||||| |||||||| ||||||| |||||||| ||| || |||||  ||| |  |||||||||| || |||| ||||||||||||| ||    
T  45577 tatcagagaaactattaagaaagattcggaaatt-aatgagttagaccgagatatgatgtacgttagaacattatagcgtaatttgatccatgtagccga 45479  T
Q  117 cc 118  Q
    ||    
T  45478 cc 45477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 514 - 602
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||| ||  |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  514 aatgagttgtacccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 28974 - 28900
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||| ||| |||||| |||||| |||||| | || ||||||||||||| ||||||| ||||||||| ||||||||    
T  28974 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 16521 - 16448
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggctt 139  Q
    ||||||||  ||||| |||||||||||||||||| |||||||||| || ||||||| | ||| ||| |||||||    
T  16521 aaatatggtttatgatagaacattatggcataatttgatccatgtggccgaccccactcagttggataaggctt 16448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 3927 - 3839
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    ||||||||||| | ||||||||  |||||  |||||||| ||| |||| ||||| ||||||  ||||||||||||||||| | ||||||    
T  3927 aatgagttggattaaaatatggtttatgattgaacattaaggcttaatttgatcaatgtagtcgaccccaattagtgggatatggcttg 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 48201 - 48140
Alignment:
Q  66 aaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagt 127  Q
    |||||||| |||||| |||| |||||||| |||| ||||||||||||| ||| ||| |||||    
T  48201 aaatatggtgtatgatagaatattatggcgtaatttgatccatgtagccgactccacttagt 48140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 43588 - 43540
Alignment:
Q  24 gaaactattaggaaagatttggaaattaaatgagttggactgaaatatgg 73  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  43588 gaaactattaggaaagatttagaaatt-aatgtgttgaactgaaatatgg 43540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 25631 - 25543
Alignment:
Q  52 aatgagttggactgaaatatggcgtatgaaagaacattatggcataatatgatccatgtagctgaccccaattagtgggaaaaggcttg 140  Q
    |||||||||||   |||| ||| |||||| |||||| |||| | | || | ||||||||||| ||||||| ||||||||| ||||||||    
T  25631 aatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttg 25543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University