View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19979_high_8 (Length: 204)
Name: NF19979_high_8
Description: NF19979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19979_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 6207836 - 6207985
Alignment:
| Q |
34 |
aattggctagtgtttgatggagaataggttagtgttcaaagtgaaagattcatagattattacatgaataagaccatgtt------tttgagacactatg |
127 |
Q |
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| T |
6207836 |
aattgactagtgtttgatggagaataggctagtgttcaaagtgaaagattcataggttattacatgaa---gaccatgtttttgtttttgagagactatg |
6207932 |
T |
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| Q |
128 |
tttcttccataaatgtggtcttctctatgtaattgtcttgttttttcactttgc |
181 |
Q |
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| T |
6207933 |
tttcttccataaatgtggtcttctctatgtaattgtcttg-tttttcactttgc |
6207985 |
T |
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