View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19981_high_6 (Length: 278)
Name: NF19981_high_6
Description: NF19981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19981_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 27080204 - 27079941
Alignment:
| Q |
1 |
catataagtacagccatactaagctcgaacgaaggatcataacagctacgagatcgttagccttatcaagccattgctagtaaaacgaattaatcaaccg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27080204 |
catataagtacagccatactaagctcgaacgaaggatcataacagctacgagatcgctagccttatcaagccattgctagtaaaacgaattaatcaaccg |
27080105 |
T |
|
| Q |
101 |
aagttgaactataactgaagccagttgattattcagctggcacaaccaccctttaggaaaataacaaatcgtaatattctataatattataccagtcgcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27080104 |
aagttgaactataactgaagccagttgattattcagctggcacaaccaccctttaggaaaataacaaatcgtaatattctataatattataccagtcgcc |
27080005 |
T |
|
| Q |
201 |
tcaacagtaaatttcatcattcatctaaattacctagctctttctcccacttcaggccgttcat |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27080004 |
tcaacagtaaatttcatcattcatctaaattacctagctctttctcccacttcaggccgttcat |
27079941 |
T |
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