View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19982_high_8 (Length: 220)
Name: NF19982_high_8
Description: NF19982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19982_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 33545432 - 33545612
Alignment:
| Q |
26 |
agactttatactatctgcgtctcacaatctcacactaccacatccttactttctataagaactacattaattctgtatcattcttccgggtccatggatc |
125 |
Q |
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| T |
33545432 |
agactttatactatctgcgtctcacaatctcacactaccacatccttactttctataagaactacattaattctgtatcattcttccgggtccatggatc |
33545531 |
T |
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| Q |
126 |
tattgaattcatgcataagcttacatggttgaaagcgtctcaaagaaaaagggccatacggtcccttaccatatgctcaaat |
207 |
Q |
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| T |
33545532 |
tattg-attcatgcataagcttacatggttgaaagtgtcacgaagaaaaagggccatacggtcccttaccatatgctcaaat |
33545612 |
T |
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