View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19987_low_1 (Length: 840)

Name: NF19987_low_1
Description: NF19987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19987_low_1
NF19987_low_1
[»] chr3 (93 HSPs)
chr3 (13-740)||(35963076-35963812)
chr3 (467-689)||(28875383-28875612)
chr3 (501-681)||(14752160-14752347)
chr3 (501-671)||(50650989-50651166)
chr3 (501-666)||(37042369-37042541)
chr3 (501-687)||(41476287-41476474)
chr3 (501-689)||(6075058-6075253)
chr3 (501-689)||(7866435-7866630)
chr3 (501-672)||(47864185-47864363)
chr3 (527-672)||(6438077-6438229)
chr3 (501-681)||(54464848-54465034)
chr3 (501-672)||(36546536-36546714)
chr3 (501-672)||(36561601-36561779)
chr3 (501-681)||(579097-579277)
chr3 (501-681)||(46711610-46711796)
chr3 (507-666)||(23311551-23311717)
chr3 (502-689)||(19464052-19464248)
chr3 (501-672)||(50730103-50730281)
chr3 (501-672)||(50782573-50782751)
chr3 (501-740)||(2927215-2927462)
chr3 (507-672)||(37074952-37075126)
chr3 (501-670)||(8703105-8703277)
chr3 (501-670)||(9054992-9055164)
chr3 (507-666)||(11054269-11054432)
chr3 (501-687)||(26207993-26208186)
chr3 (501-666)||(30189570-30189743)
chr3 (509-672)||(53270227-53270398)
chr3 (515-691)||(20847235-20847417)
chr3 (507-681)||(26724949-26725130)
chr3 (501-626)||(31836959-31837091)
chr3 (598-740)||(33974615-33974756)
chr3 (507-672)||(32619787-32619960)
chr3 (501-603)||(9264621-9264723)
chr3 (501-672)||(29235187-29235359)
chr3 (501-656)||(8096970-8097132)
chr3 (511-656)||(30454687-30454838)
chr3 (744-816)||(35962945-35963017)
chr3 (144-323)||(39538143-39538329)
chr3 (550-692)||(41936199-41936339)
chr3 (501-603)||(23910465-23910567)
chr3 (598-691)||(6752645-6752738)
chr3 (603-672)||(9264002-9264071)
chr3 (567-656)||(54725628-54725717)
chr3 (505-656)||(17587718-17587867)
chr3 (598-678)||(46557257-46557337)
chr3 (501-672)||(47115843-47116021)
chr3 (507-656)||(22479012-22479168)
chr3 (501-656)||(34194892-34195054)
chr3 (612-672)||(48802550-48802610)
chr3 (508-656)||(22455967-22456122)
chr3 (545-666)||(3972275-3972402)
chr3 (545-666)||(3997476-3997603)
chr3 (507-656)||(7886575-7886731)
chr3 (598-671)||(47866969-47867041)
chr3 (501-656)||(2994367-2994532)
chr3 (501-656)||(10114915-10115077)
chr3 (541-656)||(38401384-38401506)
chr3 (347-463)||(38856954-38857069)
chr3 (567-661)||(34722623-34722724)
chr3 (598-681)||(38674855-38674938)
chr3 (502-656)||(47443927-47444087)
chr3 (466-603)||(8769496-8769631)
chr3 (501-656)||(10252015-10252177)
chr3 (501-597)||(25242130-25242226)
chr3 (610-690)||(31181003-31181083)
chr3 (347-427)||(49341145-49341225)
chr3 (567-656)||(46918231-46918327)
chr3 (550-607)||(16032988-16033045)
chr3 (567-655)||(23209298-23209393)
chr3 (627-672)||(23910580-23910625)
chr3 (501-657)||(31126214-31126377)
chr3 (501-606)||(51309473-51309578)
chr3 (501-656)||(10014273-10014435)
chr3 (412-464)||(12402969-12403021)
chr3 (391-466)||(48084820-48084895)
chr3 (597-655)||(12128725-12128783)
chr3 (501-535)||(46557122-46557156)
chr3 (391-464)||(550816-550888)
chr3 (355-416)||(4698930-4698991)
chr3 (354-415)||(9189632-9189693)
chr3 (604-657)||(21654247-21654300)
chr3 (604-657)||(23513569-23513622)
chr3 (604-657)||(26641177-26641230)
chr3 (610-667)||(36509527-36509583)
chr3 (354-419)||(40493936-40494001)
chr3 (604-657)||(43575959-43576012)
chr3 (604-657)||(46296142-46296195)
chr3 (604-657)||(46580538-46580591)
chr3 (501-546)||(47866876-47866921)
chr3 (604-657)||(51255188-51255241)
chr3 (604-657)||(52172075-52172128)
chr3 (604-657)||(52252038-52252091)
chr3 (604-657)||(53020185-53020238)
[»] chr4 (72 HSPs)
chr4 (501-740)||(4058635-4058881)
chr4 (501-672)||(20281579-20281757)
chr4 (501-666)||(47867873-47868045)
chr4 (501-678)||(20716162-20716346)
chr4 (501-681)||(29203485-29203672)
chr4 (501-672)||(14332748-14332926)
chr4 (501-660)||(24940365-24940531)
chr4 (501-666)||(2229241-2229413)
chr4 (501-738)||(39078080-39078322)
chr4 (501-672)||(26916313-26916491)
chr4 (505-740)||(35310732-35310974)
chr4 (501-672)||(41414597-41414774)
chr4 (501-678)||(55580651-55580836)
chr4 (501-672)||(28668987-28669164)
chr4 (507-672)||(56318062-56318234)
chr4 (501-681)||(5483264-5483451)
chr4 (501-681)||(10069676-10069863)
chr4 (501-687)||(1585335-1585526)
chr4 (501-727)||(17794527-17794763)
chr4 (501-644)||(7654633-7654783)
chr4 (507-644)||(16604838-16604982)
chr4 (502-666)||(42915523-42915695)
chr4 (501-692)||(48793616-48793810)
chr4 (598-681)||(52535675-52535758)
chr4 (501-656)||(53848471-53848626)
chr4 (507-584)||(16473831-16473908)
chr4 (509-654)||(32203226-32203371)
chr4 (501-666)||(8683292-8683462)
chr4 (505-651)||(17799124-17799277)
chr4 (501-692)||(21722668-21722850)
chr4 (598-681)||(35529651-35529734)
chr4 (501-656)||(5064641-5064803)
chr4 (501-656)||(8013075-8013237)
chr4 (567-656)||(8178291-8178387)
chr4 (501-672)||(14583717-14583895)
chr4 (501-557)||(12002619-12002675)
chr4 (560-687)||(50145709-50145843)
chr4 (346-441)||(56269319-56269414)
chr4 (509-656)||(46070517-46070668)
chr4 (569-656)||(23978169-23978263)
chr4 (541-656)||(47516217-47516339)
chr4 (501-672)||(50080442-50080615)
chr4 (622-687)||(31280172-31280237)
chr4 (505-681)||(32323252-32323434)
chr4 (502-656)||(5841766-5841927)
chr4 (505-548)||(7438767-7438810)
chr4 (393-464)||(12312477-12312548)
chr4 (507-550)||(52535589-52535632)
chr4 (598-672)||(25297312-25297386)
chr4 (501-657)||(29180371-29180534)
chr4 (604-657)||(37788449-37788502)
chr4 (374-419)||(38543886-38543931)
chr4 (569-657)||(40411104-40411199)
chr4 (545-657)||(50768443-50768562)
chr4 (604-657)||(52713061-52713114)
chr4 (418-466)||(1871278-1871326)
chr4 (354-416)||(6982690-6982752)
chr4 (346-416)||(27790265-27790335)
chr4 (416-466)||(31862244-31862294)
chr4 (398-464)||(34778424-34778489)
chr4 (597-655)||(40553774-40553832)
chr4 (567-656)||(49080261-49080357)
chr4 (604-658)||(49902024-49902078)
chr4 (411-464)||(18207059-18207112)
chr4 (501-606)||(29899771-29899876)
chr4 (604-657)||(30776553-30776606)
chr4 (604-657)||(30777485-30777538)
chr4 (604-657)||(38187795-38187848)
chr4 (604-657)||(39970058-39970111)
chr4 (604-657)||(47807193-47807246)
chr4 (604-657)||(51495147-51495200)
chr4 (604-657)||(53677548-53677601)
[»] chr8 (63 HSPs)
chr8 (501-681)||(34890168-34890355)
chr8 (472-672)||(43216312-43216519)
chr8 (501-740)||(36190692-36190938)
chr8 (501-672)||(7858516-7858694)
chr8 (501-666)||(7022397-7022569)
chr8 (502-740)||(24892759-24893006)
chr8 (527-687)||(31734088-31734255)
chr8 (501-666)||(26483526-26483698)
chr8 (501-681)||(8711855-8712038)
chr8 (508-673)||(28348598-28348769)
chr8 (504-672)||(15824634-15824803)
chr8 (501-672)||(34158284-34158463)
chr8 (515-672)||(15957919-15958085)
chr8 (505-672)||(41086384-41086558)
chr8 (527-689)||(13143735-13143904)
chr8 (520-689)||(35456038-35456213)
chr8 (501-681)||(13143939-13144142)
chr8 (501-652)||(30575828-30575987)
chr8 (503-672)||(8107613-8107789)
chr8 (501-691)||(29920262-29920459)
chr8 (501-686)||(8709780-8709970)
chr8 (515-738)||(35525521-35525737)
chr8 (502-656)||(41362302-41362463)
chr8 (568-656)||(14576213-14576301)
chr8 (501-617)||(40773397-40773513)
chr8 (515-692)||(16879400-16879583)
chr8 (599-666)||(4046993-4047060)
chr8 (598-672)||(7499714-7499789)
chr8 (501-607)||(8712584-8712690)
chr8 (576-661)||(3642039-3642130)
chr8 (503-605)||(8745645-8745747)
chr8 (501-656)||(17713227-17713389)
chr8 (501-602)||(16358106-16358206)
chr8 (501-656)||(2628158-2628320)
chr8 (597-673)||(41755913-41755988)
chr8 (570-656)||(25195109-25195202)
chr8 (567-656)||(26954452-26954548)
chr8 (545-657)||(25321624-25321743)
chr8 (501-657)||(34713532-34713695)
chr8 (564-666)||(2052830-2052937)
chr8 (501-656)||(17336746-17336908)
chr8 (501-603)||(44663786-44663885)
chr8 (501-655)||(5217397-5217557)
chr8 (597-656)||(27819663-27819722)
chr8 (501-548)||(45190703-45190750)
chr8 (501-583)||(2052947-2053029)
chr8 (501-654)||(38072169-38072329)
chr8 (501-657)||(27621134-27621297)
chr8 (409-466)||(28738752-28738809)
chr8 (604-657)||(31133133-31133186)
chr8 (502-607)||(34899985-34900090)
chr8 (391-463)||(18689495-18689566)
chr8 (507-538)||(11158690-11158721)
chr8 (501-543)||(7499839-7499881)
chr8 (501-535)||(33563501-33563535)
chr8 (560-657)||(39187237-39187341)
chr8 (604-657)||(3099957-3100010)
chr8 (598-651)||(7670749-7670802)
chr8 (624-657)||(17749689-17749722)
chr8 (604-657)||(27752590-27752643)
chr8 (604-657)||(37598074-37598127)
chr8 (604-657)||(44052625-44052678)
chr8 (604-657)||(44358595-44358648)
[»] scaffold0062 (2 HSPs)
scaffold0062 (501-689)||(44764-44959)
scaffold0062 (391-463)||(58684-58755)
[»] chr1 (87 HSPs)
chr1 (501-681)||(15959633-15959820)
chr1 (505-751)||(46542895-46543146)
chr1 (501-672)||(2126028-2126206)
chr1 (501-672)||(32623998-32624176)
chr1 (502-740)||(6785379-6785622)
chr1 (501-681)||(6786819-6787006)
chr1 (501-740)||(33369476-33369718)
chr1 (501-681)||(45226119-45226306)
chr1 (501-672)||(39555579-39555757)
chr1 (501-666)||(24190466-24190637)
chr1 (512-691)||(39932576-39932762)
chr1 (501-738)||(33431485-33431727)
chr1 (509-672)||(12448969-12449138)
chr1 (501-673)||(3875012-3875193)
chr1 (501-672)||(32983165-32983341)
chr1 (507-672)||(42965815-42965985)
chr1 (502-690)||(47014487-47014679)
chr1 (501-740)||(28016739-28016982)
chr1 (501-666)||(35691388-35691560)
chr1 (507-740)||(7467961-7468191)
chr1 (501-692)||(24728619-24728818)
chr1 (501-673)||(28120748-28120927)
chr1 (507-671)||(1820406-1820577)
chr1 (501-671)||(40718669-40718846)
chr1 (501-666)||(3076291-3076463)
chr1 (501-672)||(43667296-43667472)
chr1 (501-682)||(13136547-13136731)
chr1 (520-690)||(37735395-37735572)
chr1 (501-740)||(11240968-11241195)
chr1 (502-681)||(47600030-47600219)
chr1 (541-656)||(8889730-8889845)
chr1 (501-740)||(44148829-44149070)
chr1 (507-672)||(46818501-46818673)
chr1 (564-672)||(16854131-16854245)
chr1 (520-671)||(2246026-2246184)
chr1 (501-681)||(1034839-1035023)
chr1 (501-603)||(52984999-52985101)
chr1 (598-687)||(23392263-23392351)
chr1 (612-717)||(50665208-50665313)
chr1 (501-656)||(45840059-45840220)
chr1 (598-681)||(50012572-50012655)
chr1 (501-604)||(50176587-50176690)
chr1 (512-672)||(3861699-3861864)
chr1 (501-656)||(5950445-5950610)
chr1 (541-656)||(5858404-5858526)
chr1 (550-665)||(10558798-10558920)
chr1 (564-678)||(50369942-50370066)
chr1 (568-678)||(6787050-6787166)
chr1 (502-576)||(4672924-4672998)
chr1 (501-638)||(32742195-32742339)
chr1 (501-657)||(23873823-23873986)
chr1 (501-656)||(7397712-7397874)
chr1 (501-656)||(37538815-37538977)
chr1 (509-603)||(30221791-30221885)
chr1 (597-655)||(42724101-42724159)
chr1 (598-650)||(7876039-7876091)
chr1 (628-672)||(25391674-25391718)
chr1 (503-672)||(47302903-47303077)
chr1 (597-655)||(7190663-7190721)
chr1 (352-418)||(16242220-16242286)
chr1 (567-656)||(16688142-16688238)
chr1 (545-666)||(43765290-43765418)
chr1 (501-607)||(52841438-52841544)
chr1 (564-656)||(13351686-13351785)
chr1 (501-657)||(25990749-25990912)
chr1 (501-628)||(32318553-32318687)
chr1 (501-656)||(41063747-41063910)
chr1 (507-607)||(35366202-35366302)
chr1 (505-644)||(298665-298812)
chr1 (516-655)||(2459881-2460020)
chr1 (391-466)||(18976304-18976379)
chr1 (597-656)||(34102069-34102127)
chr1 (507-598)||(46803670-46803761)
chr1 (346-419)||(8711007-8711081)
chr1 (411-471)||(7844983-7845044)
chr1 (604-657)||(26907195-26907248)
chr1 (643-692)||(30221711-30221760)
chr1 (604-657)||(31970415-31970468)
chr1 (604-657)||(35941842-35941895)
chr1 (604-657)||(39026352-39026405)
chr1 (604-657)||(40220057-40220110)
chr1 (604-657)||(40935719-40935772)
chr1 (604-657)||(40960580-40960633)
chr1 (611-656)||(43359696-43359741)
chr1 (599-656)||(44510317-44510374)
chr1 (604-657)||(44875180-44875233)
chr1 (385-466)||(52323604-52323685)
[»] chr5 (54 HSPs)
chr5 (501-681)||(20643995-20644182)
chr5 (501-672)||(42273639-42273815)
chr5 (501-666)||(6686380-6686553)
chr5 (501-672)||(37562754-37562933)
chr5 (501-666)||(43589955-43590127)
chr5 (501-681)||(20039083-20039270)
chr5 (502-689)||(34425304-34425497)
chr5 (501-672)||(11261877-11262055)
chr5 (511-672)||(37522592-37522761)
chr5 (501-740)||(25840786-25841032)
chr5 (508-689)||(38130113-38130304)
chr5 (527-672)||(32110992-32111144)
chr5 (507-690)||(43454322-43454512)
chr5 (505-665)||(19413138-19413305)
chr5 (501-738)||(4463284-4463526)
chr5 (564-687)||(38280822-38280952)
chr5 (523-740)||(8225386-8225608)
chr5 (501-691)||(17351358-17351556)
chr5 (526-740)||(5984126-5984357)
chr5 (350-466)||(5355425-5355541)
chr5 (501-666)||(39505225-39505397)
chr5 (507-656)||(8506443-8506593)
chr5 (507-656)||(12912294-12912449)
chr5 (563-672)||(32017694-32017809)
chr5 (505-656)||(3463814-3463970)
chr5 (520-681)||(42104262-42104428)
chr5 (501-607)||(30893243-30893349)
chr5 (510-579)||(32019911-32019980)
chr5 (344-444)||(2883927-2884027)
chr5 (598-681)||(9957516-9957596)
chr5 (620-672)||(12730099-12730151)
chr5 (501-628)||(23233445-23233579)
chr5 (513-692)||(41625517-41625701)
chr5 (620-687)||(104341-104408)
chr5 (567-656)||(10153987-10154083)
chr5 (608-672)||(445996-446060)
chr5 (515-656)||(16153353-16153500)
chr5 (598-691)||(1238497-1238590)
chr5 (597-678)||(11858304-11858385)
chr5 (620-672)||(12792919-12792972)
chr5 (507-655)||(32079512-32079666)
chr5 (501-557)||(9957428-9957483)
chr5 (501-557)||(12792779-12792835)
chr5 (567-656)||(5369090-5369186)
chr5 (604-657)||(8146116-8146169)
chr5 (545-657)||(31690657-31690776)
chr5 (603-655)||(8146730-8146782)
chr5 (501-557)||(12729878-12729933)
chr5 (597-655)||(6391876-6391934)
chr5 (598-628)||(12792873-12792903)
chr5 (604-657)||(8541667-8541720)
chr5 (604-657)||(20914862-20914915)
chr5 (347-436)||(33639610-33639699)
chr5 (604-657)||(42365038-42365091)
[»] chr2 (58 HSPs)
chr2 (501-672)||(45660355-45660536)
chr2 (501-681)||(19264080-19264268)
chr2 (501-672)||(45085247-45085425)
chr2 (501-672)||(6110191-6110371)
chr2 (507-672)||(28599146-28599318)
chr2 (501-672)||(3201316-3201494)
chr2 (501-666)||(35517119-35517291)
chr2 (502-672)||(33198624-33198801)
chr2 (501-672)||(25572036-25572213)
chr2 (501-690)||(12938214-12938410)
chr2 (507-739)||(8701525-8701764)
chr2 (501-681)||(11617005-11617192)
chr2 (501-678)||(6765925-6766110)
chr2 (501-672)||(41528246-41528425)
chr2 (501-692)||(24204521-24204719)
chr2 (527-672)||(14873952-14874105)
chr2 (508-681)||(28858290-28858473)
chr2 (501-740)||(9864710-9864955)
chr2 (501-666)||(29524033-29524205)
chr2 (501-678)||(35022881-35023066)
chr2 (507-687)||(33677458-33677645)
chr2 (507-687)||(5963176-5963362)
chr2 (501-672)||(7645219-7645400)
chr2 (567-656)||(11030988-11031077)
chr2 (505-692)||(44454961-44455153)
chr2 (550-687)||(40584439-40584583)
chr2 (501-656)||(26998323-26998485)
chr2 (501-638)||(35115795-35115940)
chr2 (507-673)||(23987022-23987188)
chr2 (501-633)||(43415434-43415569)
chr2 (501-656)||(32010108-32010270)
chr2 (503-672)||(30830590-30830766)
chr2 (501-597)||(40808712-40808807)
chr2 (564-672)||(30421237-30421352)
chr2 (567-627)||(16179645-16179705)
chr2 (567-656)||(8032726-8032823)
chr2 (609-671)||(39696906-39696968)
chr2 (501-656)||(4891630-4891793)
chr2 (501-656)||(33932915-33933073)
chr2 (502-607)||(4707483-4707585)
chr2 (541-649)||(9709526-9709641)
chr2 (362-427)||(28584953-28585018)
chr2 (507-656)||(38071002-38071157)
chr2 (604-657)||(14565475-14565528)
chr2 (501-657)||(18833902-18834065)
chr2 (586-655)||(35245815-35245884)
chr2 (391-463)||(15709772-15709843)
chr2 (505-545)||(32428098-32428138)
chr2 (598-633)||(5280603-5280638)
chr2 (393-464)||(35316828-35316898)
chr2 (504-606)||(9294714-9294816)
chr2 (501-535)||(11825351-11825385)
chr2 (604-657)||(792458-792511)
chr2 (604-657)||(4033777-4033830)
chr2 (604-657)||(5091642-5091695)
chr2 (604-657)||(10478179-10478232)
chr2 (604-657)||(33635337-33635390)
chr2 (604-657)||(43451506-43451559)
[»] chr7 (51 HSPs)
chr7 (501-672)||(6191035-6191213)
chr7 (501-672)||(18102520-18102698)
chr7 (507-681)||(25944557-25944738)
chr7 (501-666)||(14805866-14806037)
chr7 (501-666)||(15252860-15253031)
chr7 (501-666)||(19912761-19912933)
chr7 (501-666)||(25737619-25737791)
chr7 (501-666)||(45485951-45486123)
chr7 (501-666)||(46760249-46760421)
chr7 (501-666)||(35923248-35923419)
chr7 (520-681)||(20123691-20123859)
chr7 (501-681)||(4910627-4910812)
chr7 (501-666)||(47779600-47779772)
chr7 (501-672)||(22632079-22632257)
chr7 (501-603)||(12632336-12632438)
chr7 (507-681)||(14574545-14574726)
chr7 (501-672)||(44682868-44683045)
chr7 (571-672)||(47557663-47557771)
chr7 (515-691)||(11779989-11780171)
chr7 (598-687)||(2610664-2610753)
chr7 (564-739)||(9158014-9158194)
chr7 (507-681)||(15995700-15995882)
chr7 (541-656)||(38260322-38260444)
chr7 (501-606)||(10248591-10248698)
chr7 (503-656)||(39170540-39170700)
chr7 (578-686)||(27810804-27810919)
chr7 (501-657)||(35084052-35084215)
chr7 (501-557)||(37767011-37767067)
chr7 (625-672)||(12633110-12633157)
chr7 (600-686)||(19492493-19492579)
chr7 (364-465)||(23142519-23142620)
chr7 (545-671)||(35068885-35069004)
chr7 (507-657)||(40560382-40560539)
chr7 (507-657)||(48879388-48879545)
chr7 (599-656)||(3777984-3778041)
chr7 (501-657)||(43107856-43108019)
chr7 (568-607)||(8015732-8015771)
chr7 (393-464)||(9559056-9559126)
chr7 (391-466)||(33450507-33450582)
chr7 (391-466)||(47500282-47500357)
chr7 (501-535)||(2633329-2633363)
chr7 (610-692)||(4237823-4237904)
chr7 (604-657)||(19933116-19933169)
chr7 (604-657)||(19964255-19964308)
chr7 (604-657)||(21654182-21654235)
chr7 (604-657)||(22111391-22111444)
chr7 (604-657)||(23106453-23106506)
chr7 (604-657)||(23731560-23731613)
chr7 (604-657)||(35181192-35181245)
chr7 (604-657)||(40583145-40583198)
chr7 (604-657)||(45598904-45598957)
[»] chr6 (32 HSPs)
chr6 (507-666)||(11082244-11082410)
chr6 (501-666)||(21542414-21542586)
chr6 (501-666)||(35129047-35129220)
chr6 (501-692)||(7274868-7275066)
chr6 (505-666)||(3095717-3095884)
chr6 (501-666)||(34177634-34177806)
chr6 (505-672)||(30794189-30794363)
chr6 (501-678)||(12461422-12461606)
chr6 (501-688)||(17751737-17751931)
chr6 (598-672)||(9428760-9428834)
chr6 (567-656)||(5300659-5300748)
chr6 (501-656)||(4031991-4032156)
chr6 (598-672)||(31107181-31107254)
chr6 (776-816)||(6922700-6922740)
chr6 (501-557)||(9428857-9428913)
chr6 (541-656)||(16524384-16524505)
chr6 (348-427)||(28863030-28863109)
chr6 (625-663)||(7163843-7163881)
chr6 (567-652)||(16013491-16013583)
chr6 (501-602)||(14573121-14573221)
chr6 (586-655)||(16655200-16655269)
chr6 (604-657)||(17598294-17598347)
chr6 (604-657)||(31887224-31887277)
chr6 (501-600)||(5822027-5822126)
chr6 (391-466)||(13888522-13888597)
chr6 (597-691)||(3102769-3102863)
chr6 (604-657)||(12278707-12278760)
chr6 (604-657)||(17721912-17721965)
chr6 (605-658)||(26540288-26540341)
chr6 (407-464)||(29698166-29698222)
chr6 (604-657)||(30766447-30766500)
chr6 (604-657)||(33756257-33756310)
[»] scaffold0442 (1 HSPs)
scaffold0442 (507-672)||(10035-10207)
[»] scaffold0300 (1 HSPs)
scaffold0300 (501-666)||(566-738)
[»] scaffold0132 (2 HSPs)
scaffold0132 (501-740)||(935-1180)
scaffold0132 (501-740)||(8895-9140)
[»] scaffold0045 (1 HSPs)
scaffold0045 (501-672)||(77947-78125)
[»] scaffold0009 (2 HSPs)
scaffold0009 (507-740)||(157717-157956)
scaffold0009 (598-690)||(52699-52791)
[»] scaffold0774 (1 HSPs)
scaffold0774 (527-670)||(3447-3597)
[»] scaffold0018 (1 HSPs)
scaffold0018 (505-672)||(154851-155024)
[»] scaffold0005 (1 HSPs)
scaffold0005 (501-672)||(233480-233658)
[»] scaffold0565 (1 HSPs)
scaffold0565 (501-656)||(5868-6030)
[»] scaffold0111 (1 HSPs)
scaffold0111 (526-667)||(40174-40321)
[»] scaffold0012 (2 HSPs)
scaffold0012 (598-692)||(160220-160314)
scaffold0012 (393-464)||(208066-208136)
[»] scaffold1786 (1 HSPs)
scaffold1786 (625-678)||(848-900)
[»] scaffold0330 (1 HSPs)
scaffold0330 (501-656)||(3174-3336)
[»] scaffold0391 (1 HSPs)
scaffold0391 (514-678)||(5149-5315)
[»] scaffold0010 (1 HSPs)
scaffold0010 (501-607)||(160912-161018)


Alignment Details
Target: chr3 (Bit Score: 584; Significance: 0; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 584; E-Value: 0
Query Start/End: Original strand, 13 - 740
Target Start/End: Complemental strand, 35963812 - 35963076
Alignment:
Q  13 aatatatcaagcgagccaatataattctttctaagaccattacttgagtacgtggggtaaataaacccggattgagttagattttaatgggattgaacaa 112  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35963812 aatatatcgaacgagcgaatataattctttctaagaccattacttgagtacgtggggtgaataaacccggattgagttagattttaatgggattgaacaa 35963713  T
Q  113 ttatgcacaaaatccatcgttttctatgtgacaccactaagtgcaaagaggaatgagggaaaaagcgcattcatagtggagatgcacggcaaaaaccgtg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35963712 ttatgcacaaaatccatcgttttctatgtgacaccactaagtgcaaagaggaatgagggaaaaagcgcattcatagtggagatgcacgccaaaaaccgtg 35963613  T
Q  213 tcaatggaccacaccacaaaggaggaaactcatagtccaatgcaagtcccatgatccctttaataagggagactcaagcactactcgtgtaattagccga 312  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35963612 tcaatggaccacaccacaaatgaggaaactcatagtccaatacaagtcccatgatccctttaataagggagactcaagcactactcgtgtaattagccga 35963513  T
Q  313 gcatagtttttaagtaaagatcctaactcagtttgagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaa 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35963512 gcatagtttttaagtaaagatcctaactcagtttgagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaa 35963413  T
Q  413 aaaagtagatagtggattctaccaataagtgggtcccatcattattaattatttatactccctccatcccaaattataagnnnnnnnntcacatttatta 512  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||    
T  35963412 aaaagtagatagtggatcctaccaataagtaggtcccatcattattaattatttatactccctccatcccaaattataaggaaaaaaatcacacttatta 35963313  T
Q  513 agaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------ttattggtt 605  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||       |||||||||    
T  35963312 agaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttattggttattggtt 35963213  T
Q  606 atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga--nnnnnnnnaaa 703  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||          |||    
T  35963212 atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagtatttcttagaaaagatgattttttttttaaa 35963113  T
Q  704 aacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
    |||||||||||||||||||||||||||||||||||||    
T  35963112 aacaagattaaataggagaaaagtgtgtcatttttgc 35963076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 467 - 689
Target Start/End: Complemental strand, 28875612 - 28875383
Alignment:
Q  467 atactccctccatcccaaattataagnnnnnnnntcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaa 566  Q
    ||||||||||| | ||||||||||||        ||||||||||||||||||||||| ||||||||||||||  |||||| | ||||||||  |||||||    
T  28875612 atactccctccgttccaaattataagaaaaaaaatcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaa 28875513  T
Q  567 aagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatg 659  Q
    |||||||||| ||||||| ||||||||||||       ||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||||||    
T  28875512 aagttttataagaagatgtaaaaacaattttcattggctattggttatggagaaaatgaaagaaaaagaaaattgaatgtaatttgtatttaattttatg 28875413  T
Q  660 agaataaacaaaagcttttcttaaaaaaga 689  Q
    |||||||||||||| |||||||| ||||||    
T  28875412 agaataaacaaaagtttttcttagaaaaga 28875383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 14752160 - 14752347
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||| |||| ||||||||  |||||||||  |||||||||||||| ||||||||||||       
T  14752160 tcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcat 14752259  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||||    
T  14752260 tgactattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaagaaaagtttttctt 14752347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 501 - 671
Target Start/End: Original strand, 50650989 - 50651166
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||| |  |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  50650989 tcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcat 50651088  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaa 671  Q
        ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  50651089 tgactattggttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataatcaaa 50651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 37042369 - 37042541
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  37042369 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcat 37042468  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||| ||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  37042469 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 37042541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 501 - 687
Target Start/End: Original strand, 41476287 - 41476474
Alignment:
Q  501 tcacatttattaagaaaactaaaa-cataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta 599  Q
    ||||| |||||||||||||||||| ||||| ||||||||| |||||||| ||||||||  ||| |||||||||||||| |||||| ||||| |||||| |    
T  41476287 tcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttca 41476386  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||| || ||| |||||||||| || |||||||| |||  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  41476387 ttggctagggaaaaaatgaaagggaaagaaaattgaatctaatttgcatttaattttatgagaataaacaaaagtttttcttgaaaaa 41476474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 501 - 689
Target Start/End: Complemental strand, 6075253 - 6075058
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||  |||||||||||||| ||| |||| ||||||||  ||||||||||| ||| ||||||| | |||||||||||| ||    
T  6075253 tcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcat 6075154  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
    |||       ||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  6075153 tggccattggttatgcaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgaaaaaga 6075058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 501 - 689
Target Start/End: Original strand, 7866435 - 7866630
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||| | | ||||  ||| ||||||||||||| ||||||| ||||||||||||       
T  7866435 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcat 7866534  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
        ||||||||||||| ||||| ||||||| |||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||    
T  7866535 tgactattggttatggaaaaaataaaagagatagaaaattgaatgtaattttcatttaattttatgagaataaacaaaagtttttcttgaaaaaga 7866630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 47864363 - 47864185
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||  ||||  ||| ||||||||||||||||||||| ||||||||||||       
T  47864363 tcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 47864264  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||| ||||| | ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  47864263 tgactattgattatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 47864185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 527 - 672
Target Start/End: Complemental strand, 6438229 - 6438077
Alignment:
Q  527 taagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaa 619  Q
    ||||||||||||| |||||||| ||||||||  ||| |||||| |||||||||||||| ||||||||||||       ||||||||||||||||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatggagaaaatgaa 6438130  T
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  6438129 agagagataaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 6438077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 54464848 - 54465034
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||| |||||||| |||  |||||   ||||||||||||| ||||||||||||       
T  54464848 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt-ctttaaaaaaaaattataggaagatgtaaaaacaattttcgt 54464946  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| ||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  54464947 tggctattggttatggaaaaagtgaaagagagagaaaattgaatgtaatttgcgtttaattttatgagaataaacaaaagtttttctt 54465034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 36546714 - 36546536
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||  ||||||||||||| ||||||||||| |||| |||||||       
T  36546714 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36546615  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        |||||||||| || ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  36546614 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaa 36546536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 36561601 - 36561779
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||  ||||||||||||| ||||||||||| |||| |||||||       
T  36561601 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36561700  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        |||||||||| || ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  36561701 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaa 36561779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 579097 - 579277
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||||       |||| ||||||||  ||| ||||||||||||||||||||  ||||||||||||       
T  579097 tcacacttattaagaaaactaaaacataagaatttgg-------ttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcat 579189  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||    
T  579190 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagattaaacaaaagtttttctt 579277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 46711610 - 46711796
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| |||| ||||||||  ||| ||||||||||||||||||||| ||||||||| ||       
T  46711610 tcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcat 46711709  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        |||||||||| || ||||||||||||||||||| || |||| |||||| |||||||||||||| |||||||||||| |||||||    
T  46711710 tggctattggttat-gaaaaaatgaaagagagagaaatttgaatgtaatttgtatttaattttatgaaaataaacaaaagtttttctt 46711796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 507 - 666
Target Start/End: Original strand, 23311551 - 23311717
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||||||||||||||||||| ||||| ||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       ||    
T  23311551 ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggcta 23311650  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||| | |||||||||||||||||||||    
T  23311651 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatacatttaattttatgagaataa 23311717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 502 - 689
Target Start/End: Complemental strand, 19464248 - 19464052
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggata--gttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-- 597  Q
    |||| ||||||| ||||||||||||||||||||||||| |||  ||||| ||||||||  ||| ||||||||||||||||||||  ||||||||||||      
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttca 19464149  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
         ||||||||||||  ||||||||||||||| ||| || |||| ||||||||||| | |||||||||||||||||||| ||||||| |||||||    
T  19464148 tttattattggttatgggaaaaatgaaagagagaaaaagttgaatgtaatttgcatttcagtttatgagaataaacaaaagtttttcttgaaaaaga 19464052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 50730281 - 50730103
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatag-ttttctgtgttttgcttggaaaaagttttataggaagatg--aaaaaacaatttt 597  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||  |||||||||||||||||||||||||  |||||| |||  |    
T  50730281 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaaaaaaatcat 50730182  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||| ||| |||||||||||| |||| ||||| |||||||||||| ||||||||||||||    
T  50730181 tgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataaacaaaa 50730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 50782573 - 50782751
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatag-ttttctgtgttttgcttggaaaaagttttataggaagatg--aaaaaacaatttt 597  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||  |||||||||||||||||||||||||  |||||| |||  |    
T  50782573 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaaaaaaatcat 50782672  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||| ||| |||||||||||| |||| ||||| |||||||||||| ||||||||||||||    
T  50782673 tgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataaacaaaa 50782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 2927462 - 2927215
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatag-ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-- 597  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||| ||| ||||  |||||| ||||||||| |||||||| ||||| ||||||      
T  2927462 tcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttatgggaagatgtaaaaataattttca 2927363  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
         ||||||||||| | |||||  |||||||||||||||||||| |||||| ||||||||| |||||||||| |||||| |||| ||  |||||||||    
T  2927362 ttggctattggttatgaaaaaaatagaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataagcaaaagtttttattggaaaagatga 2927263  T
Q  693 nnnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
            |||||||||||||||||  | |||||| |||| |||||||    
T  2927262 ttttttttaaaaacaagattaaatataataaaagtttgtcttttttgc 2927215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 507 - 672
Target Start/End: Complemental strand, 37075126 - 37074952
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||| |||||||||||||||||||||| || ||| |||| ||||||||  ||||||||||||||||||||||||| ||| ||||||||       ||    
T  37075126 ttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggcta 37075027  T
Q  600 ttggttatggagaaaatg--aaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||||| || ||||||  |||||| || |||||| |||| |||||||||||||||||||||||||||||||||    
T  37075026 ttggttatagaaaaaatgaaaaagagcgataaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 37074952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 501 - 670
Target Start/End: Complemental strand, 8703277 - 8703105
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||| ||  |||||||||  |||||||||||||| |||||||||||        
T  8703277 tcacacttattaaaaaaactaaaacataagaatttggagtatagtttt-tgtgtgttt-ttggaaaaaaatttataggaagatgtaaaaacaatttcatt 8703180  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaa 670  Q
       ||||| ||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  8703179 ggctattgattatgga-aaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaacaa 8703105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 501 - 670
Target Start/End: Complemental strand, 9055164 - 9054992
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||| ||  |||||||||  |||||||||||||| |||||||||||        
T  9055164 tcacacttattaaaaaaactaaaacataagaatttggagtatagtttt-tgtgtgttt-ttggaaaaaaatttataggaagatgtaaaaacaatttcatt 9055067  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaa 670  Q
       ||||| ||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  9055066 ggctattgattatgga-aaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaacaa 9054992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 507 - 666
Target Start/End: Original strand, 11054269 - 11054432
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttgg-aaaaagttttataggaagatgaaaaaacaatttt-------t 598  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||||||||  |||| ||||||||||||||||||||  ||||||||||||       |    
T  11054269 ttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattggct 11054368  T
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    |||||||||||| ||||||||    |||||||||| |||| |||||||||||||||||||||||||||    
T  11054369 attggttatggaaaaaatgaa----agagaaaattgaatgtaatttgcatttaattttatgagaataa 11054432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 501 - 687
Target Start/End: Complemental strand, 26208186 - 26207993
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||||  ||||| |||||| || | |||||| |||||||||||| ||    
T  26208186 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcat 26208087  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||       || ||||||||||| |||| |||||||||| |||| |||| |||||| | ||||||||||||| |||||| ||||||| |||||    
T  26208086 tggctatttattgtggagaaaatggaagaaagagaaaattgaatgtaattggcatttgaatttatgagaataagcaaaagtttttcttgaaaaa 26207993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 30189743 - 30189570
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||| |||| |||||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  30189743 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 30189644  T
Q  598 ----tattggttatgg-agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        |||||||||||| | ||||||||||| |||||| ||| |||| ||||| |||||||||||| ||||||||    
T  30189643 tggctattggttatggaaaaaaatgaaagaaagagaatattgaatgtaatttacatttaattttacgagaataa 30189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 509 - 672
Target Start/End: Complemental strand, 53270398 - 53270227
Alignment:
Q  509 attaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tatt 601  Q
    |||||||||| |||| ||||||||||||||| |||||||| ||||||||  ||| ||||||||| |||| |||||||||||| ||||||       ||||    
T  53270398 attaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcattgcctatt 53270300  T
Q  602 ggttatggagaaaatgaaagagaga--gaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||| |||||||||||||||  ||||||| |||| |||||| ||||||||||||||||||||||||||    
T  53270299 ggttatggaaaaaatgaaagagagaaagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaa 53270227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 515 - 691
Target Start/End: Original strand, 20847235 - 20847417
Alignment:
Q  515 aaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggt-------tat 607  Q
    |||| |||||||||||||||||||| ||| |||| ||||||||  |||||| |||||| |||||||||||   |||||||||| ||||||       |||    
T  20847235 aaaattaaaacataagaatttggagtataatttt-tgtgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattat 20847333  T
Q  608 ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
    ||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||   ||||| ||||||| |||||||||    
T  20847334 ggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaattttatgagaatatgtaaaagtttttcttgaaaaagatg 20847417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 507 - 681
Target Start/End: Original strand, 26724949 - 26725130
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------tta 599  Q
    |||||||||||||||||| ||||||||||| || ||| |||| ||||||||  |||||| ||||||| |  ||||||| |||||||||||       |||    
T  26724949 ttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggtta 26725048  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    ||| |||||||||||||  |||||||| |||| | |||| ||||||||| |||||| ||||||||||| ||||| |||||||    
T  26725049 ttgattatggagaaaatagaagagagataaaactgaatgtaatttgcatataatttcatgagaataaataaaagtttttctt 26725130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 501 - 626
Target Start/End: Complemental strand, 31837091 - 31836959
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||| ||| ||||  ||||||||||||||||||||| ||| ||||||||||||       
T  31837091 tcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcat 31836992  T
Q  598 ----tattggttatggagaaaatgaaagagaga 626  Q
        |||||||| ||||||||||||| ||||||    
T  31836991 tgactattggttgtggagaaaatgaatgagaga 31836959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 598 - 740
Target Start/End: Original strand, 33974615 - 33974756
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnn 697  Q
    ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||   |||||||||||| | ||         
T  33974615 tattggttatggaaaaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaacaaaaatctttcttaaaaaata-gattttt 33974713  T
Q  698 nnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
       ||||||||||||||||| || |||||| |||| |||||||    
T  33974714 tcaaaaaacaagattaaatatgaaaaaagtttgtcttttttgc 33974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 507 - 672
Target Start/End: Original strand, 32619787 - 32619960
Alignment:
Q  507 ttattaagaaaactaa-aacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------t 598  Q
    |||||||||||||||  ||||| ||||||||||| ||| | || ||||||||  |||||| | |||||||| ||||||| ||||| ||||||       |    
T  32619787 ttattaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggct 32619886  T
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||||||||||||| ||  | |||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  32619887 attggttatggagaaattgggatagagagaaaattgaatgtaatttgcatttaattttattagaataaacaaaa 32619960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 9264723 - 9264621
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||||||| |||||| ||| |||||||| ||||||||  ||| ||||||||||||| ||||||| |||||||||||| ||    
T  9264723 tcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcat 9264624  T
Q  601 tgg 603  Q
    |||    
T  9264623 tgg 9264621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 29235359 - 29235187
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||| ||| ||||  || ||||| |||| ||||||||||| ||||| ||||||       
T  29235359 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcat 29235260  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||||||||||      |||| |||| ||||| |||||||||| |||| |||||||||||    
T  29235259 tggctattggttatggaaaaaatgaaagag------aattgaatgtaatttacatttaatttaatgataataaacaaaa 29235187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 8096970 - 8097132
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||| ||||||||||||||||||||||  | |||| |  |||||||  |||||| | |||| || |||||||||||||||||| ||||| |||||        
T  8096970 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttcat 8097069  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
       |||||| |||| ||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  8097070 tggttattgcttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8097132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 30454687 - 30454838
Alignment:
Q  511 taagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------tattggt 604  Q
    ||||||||||||||||||  | |||| |  |||||||  |||||| | |||| || ||||||||||| |||||| ||||||||||||      |||||||    
T  30454687 taagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaattttattggttattggt 30454786  T
Q  605 tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||| ||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  30454787 tattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 30454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 744 - 816
Target Start/End: Complemental strand, 35963017 - 35962945
Alignment:
Q  744 tatatttttaaaacttcgacgtgtctgtcctttaagtgtaggtcagttggtagctaccatgaataatttgtgc 816  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  35963017 tatatttttaaaacttcggcgtgtctctcccataagtgtaggtcagttggtagctaccatgaataatttgtgc 35962945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 144 - 323
Target Start/End: Complemental strand, 39538329 - 39538143
Alignment:
Q  144 caccactaagtgcaaagaggaatgagggaaaaagcgcattcatagtggagatgcacggcaaaaaccgtgtcaatggaccacaccacaaaggaggaaactc 243  Q
    ||||||||| ||||||| || |||| | || || | ||||| | |||||||||| |  ||||||||||||||||||||||| |||  ||||| |||||||    
T  39538329 caccactaactgcaaagtgggatgacgaaagaaacacattcgtggtggagatgcgcaacaaaaaccgtgtcaatggaccaccccatgaaggacgaaactc 39538230  T
Q  244 atagtcc------aatgcaag-tcccatgatccctttaataagggagactcaagcactactcgtgtaattagccgagcatagttttt 323  Q
    ||||||       || ||| | | |||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  39538229 atagtcatagttgaacgcatgatgccatgatcccttcaataagggtgactcaagcactacacgtgtaattagctgagcatagttttt 39538143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 550 - 692
Target Start/End: Original strand, 41936199 - 41936339
Alignment:
Q  550 tgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatt 649  Q
    ||||||||  || ||| |||||| || |||||||| |||| ||||||| |||||||||||||||||||   ||||||||||||| |||||||||||||||    
T  41936199 tgtgttttatttagaataagtttcatgggaagatgtaaaatcaattttaattggttatggagaaaatgg--gagagagaaaattgaatgcaatttgcatt 41936296  T
Q  650 taattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    || ||| ||||||||||  ||||| |||| ||  |||||||||    
T  41936297 tagtttcatgagaataagtaaaagtttttattggaaaagatga 41936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 23910465 - 23910567
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| |||||||||||||||| ||| |||| ||| ||||||||  ||| ||||||||||||||||||||| ||||| |||||| ||    
T  23910465 tcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcat 23910564  T
Q  601 tgg 603  Q
    |||    
T  23910565 tgg 23910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 691
Target Start/End: Complemental strand, 6752738 - 6752645
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
    |||||||||||||||||||| ||||||||| ||| | |||| |||||||||||||||| |||| ||||| |||||| ||||||| |||||||||    
T  6752738 tattggttatggagaaaatggaagagagaggaaaatgaatgtaatttgcatttaatttcatgaaaataagcaaaagtttttcttgaaaaagatg 6752645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 603 - 672
Target Start/End: Complemental strand, 9264071 - 9264002
Alignment:
Q  603 gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  9264071 gttacggagaaaatgaaagagagataaaattagatgtaatttgcatttaattttatgagaataaacaaaa 9264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 54725628 - 54725717
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||| ||| |||||| ||||| |||||| |||| ||||||||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattggttattgagaaaataaaaaagagagcaaattgaatgcactttgtatttaatttt 54725717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 505 - 656
Target Start/End: Complemental strand, 17587867 - 17587718
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggt 604  Q
    ||||||||||||||||||||||||  |||||| |  |||||||  | |||| | |||| || |||||||||||||||||| ||||||||   | |||| |    
T  17587867 atttattaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattcttgaaataagttttataggaagatgtaaaaacaa--atcattgat 17587770  T
Q  605 tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||| ||||||||||||||||||  |||||||||||| ||| || ||||||||    
T  17587769 tattgagaaaatgaaagagagaacaaattaaatgcactttacacttaatttt 17587718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 598 - 678
Target Start/End: Original strand, 46557257 - 46557337
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| ||||    
T  46557257 tattagttatggaaaaaatgaaagagagagaaaattaaatgtaatttacatttaatttcatgagaataagcaaaagttttt 46557337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 47116021 - 47115843
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| |||| |||||||   || ||| || |||||| | |||||| |||| ||||||        
T  47116021 tcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgtttgttttagaataaattttatggaaagatgtaaaagcaattttctt 47115922  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
       |||||| ||||||| |||||| || | ||||||||||||||| |||||  ||||||||| |||||||||| |||||    
T  47115921 tggttattgattatggataaaatggaaaaaagagaaaattaaatgaaatttatatttaatttcatgagaataagcaaaa 47115843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 507 - 656
Target Start/End: Original strand, 22479012 - 22479168
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg--- 603  Q
    ||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||| ||||||| |||| |||||       
T  22479012 ttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattggtag 22479111  T
Q  604 ----ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
        |||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  22479112 ttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 22479168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 34195054 - 34194892
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||  | |||| |  |||||||  ||| ||   | || || |||||||||||||||||| ||||||||||||       
T  34195054 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtcttacccatgaaataagttttataggaagatgtaaaaacaattttcat 34194955  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
        |||||||||| ||||||||||||||||||| ||| | |||||| |||||||||||||||    
T  34194954 tggttattggttattgagaaaatgaaagagagagcaaactgaatgcactttgcatttaatttt 34194892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 612 - 672
Target Start/End: Original strand, 48802550 - 48802610
Alignment:
Q  612 aaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  48802550 aaaatgaaagagagagaaaattgaatgtaatttgcatttacttttatgagaataaacaaaa 48802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 508 - 656
Target Start/End: Original strand, 22455967 - 22456122
Alignment:
Q  508 tattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg---- 603  Q
    |||||||||||||||||||||  | |||| |  |||||||| ||||||    ||| || |||||||||||||||||  |||||||||||| |||||        
T  22455967 tattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttgattggtagt 22456066  T
Q  604 ---ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
       |||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  22456067 tgattatagagaaaatgaaaaagagagcaaattgaatgcattttgcatttaatttt 22456122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 666
Target Start/End: Complemental strand, 3972402 - 3972275
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaat 637  Q
    |||| |||||||| ||| ||| ||||||||| |||||||| ||||||||||||       ||||||||| | |||||||| ||||||||  ||||| |||    
T  3972402 ttttttgtgtttt-ctttgaataagttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3972304  T
Q  638 gcaatttgcatttaattttatgagaataa 666  Q
    | |||||||||||||||| ||||||||||    
T  3972303 gtaatttgcatttaatttcatgagaataa 3972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 666
Target Start/End: Original strand, 3997476 - 3997603
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaat 637  Q
    |||| |||||||| ||| ||| ||||||||| |||||||| ||||||||||||       ||||||||| | |||||||| ||||||||  ||||| |||    
T  3997476 ttttttgtgtttt-ctttgaataagttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3997574  T
Q  638 gcaatttgcatttaattttatgagaataa 666  Q
    | |||||||||||||||| ||||||||||    
T  3997575 gtaatttgcatttaatttcatgagaataa 3997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 507 - 656
Target Start/End: Original strand, 7886575 - 7886731
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta 606  Q
    ||||||||||||||||||||||  | ||||    |||||||  |||||| | |||| || || |||||||| |||||| |||||||||||| ||||||||    
T  7886575 ttattaagaaaactaaaacatagtagtttgtgacatagtttcttgtgttattcttgaaataaattttatagaaagatgtaaaaacaattttcattggtta 7886674  T
Q  607 tg-------gagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |        ||||||||||||||||||| ||||| |||||| ||||||||| |||||    
T  7886675 ttagttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttgatttt 7886731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 671
Target Start/End: Original strand, 47866969 - 47867041
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaa 671  Q
    ||||| ||||||||||| || ||||||||||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  47866969 tattgattatggagaaagtggaagagagagaaaattgaatgtaatttgcatttaa-tttatgagaataagcaaa 47867041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 2994367 - 2994532
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaa-gatga--aaaaacaatttt 597  Q
    ||||| |||||||||||||||||| |||  | |||| |  |||||||| |||||| |||||| || |||||||||||||| || ||   |||||||||||    
T  2994367 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgttatgcttgaaataagttttataggaaggaagatgtaaaacaatttt 2994466  T
Q  598 tattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
     |||||       |||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  2994467 cattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 2994532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 10115077 - 10114915
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| |||| ||| || |  ||| || |||||||||||||||||| |||||||||||| ||    
T  10115077 tcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10114978  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| |||||||||||| | |||| ||||| |||||| ||||| |||||||||    
T  10114977 tggtagttgattatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaatttt 10114915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 541 - 656
Target Start/End: Complemental strand, 38401506 - 38401384
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggt-------tatggagaaaatgaaagagagagaaaatt 633  Q
    |||||||| |||||| |  ||| || |||||||||||| ||||| ||||| |||||| ||||||       ||| |||||||||||| ||||||||||||    
T  38401506 atagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattttcattggtagttaattatagagaaaatgaaaaagagagaaaatt 38401407  T
Q  634 aaatgcaatttgcatttaatttt 656  Q
    ||||| | |||||||||||||||    
T  38401406 aaatgtactttgcatttaatttt 38401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 38857069 - 38856954
Alignment:
Q  347 gagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggt 446  Q
    |||||| |||||||| || ||| ||||| |||||  ||||||| ||||||||||||||||||| |||||| || | || || |||||||| |||||||||    
T  38857069 gagtaatgatcatctccaattgtttaaaataaatggagaatgtcatttggtgagagataaataaaaaaaatta-agagcgggttctaccactaagtgggt 38856971  T
Q  447 cccatcattattaatta 463  Q
    | || |||| |||||||    
T  38856970 ctcaccatttttaatta 38856954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 567 - 661
Target Start/End: Original strand, 34722623 - 34722724
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatg 659  Q
    |||||||||| ||||||| ||||||||||||       ||||||||||| | |||||||||  ||||||||||| |||| ||||| ||||||||||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatgcaaaaaatgaaaaggagagaaaattgaatgtaatttacatttaattttatg 34722722  T
Q  660 ag 661  Q
    ||    
T  34722723 ag 34722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 681
Target Start/End: Complemental strand, 38674938 - 38674855
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    ||||| ||||| |||||||||||||||||||||||| |||  |||||| ||||||||| || ||||||| | |||| |||||||    
T  38674938 tattgattatgaagaaaatgaaagagagagaaaattgaatctaatttgtatttaatttcataagaataagctaaagtttttctt 38674855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 656
Target Start/End: Original strand, 47443927 - 47444087
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta-- 599  Q
    |||||||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| || || ||||||| ||||||| |||||||||||| |      
T  47443927 cacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttata-gaagatgtaaaaacaattttcact 47444025  T
Q  600 -----ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
         ||| |||| |||||||||||| ||| || ||||| |||||| |||||||||||||||    
T  47444026 ggtagttgattatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaatttt 47444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 603
Target Start/End: Original strand, 8769496 - 8769631
Alignment:
Q  466 tatactccctccatcccaaattataagnnnnnnnntcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaa 565  Q
    |||||||||||| ||||||||| ||||        ||||| ||||||||||||||||||||||| |||| |||| ||||||||  |||||||  ||  ||    
T  8769496 tatactccctccgtcccaaattgtaagaaaaaaaatcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttt--ttttaa 8769593  T
Q  566 aaagttttataggaagatgaaaaaacaatttttattgg 603  Q
    |||| || || ||||| || ||||| ||||||||||||    
T  8769594 aaagattcatgggaagttgtaaaaataatttttattgg 8769631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 10252177 - 10252015
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| || | ||| || |  ||| || |||||||||||||||||| |||||||||||| ||    
T  10252177 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10252078  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| |||||||||||| | |||| ||||| |||||| ||||| |||||||||    
T  10252077 tggtagttgattatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaatttt 10252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 597
Target Start/End: Original strand, 25242130 - 25242226
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt 597  Q
    ||||| ||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||  || ||||||||||| |||||||||||||||||||    
T  25242130 tcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaatttt 25242226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 690
Target Start/End: Complemental strand, 31181083 - 31181003
Alignment:
Q  610 agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagat 690  Q
    |||||||  |||| || |||||||||||| ||||| |||||||||| ||||||||| ||||||| |||| || ||||||||    
T  31181083 agaaaatagaagaaagggaaaattaaatgtaatttacatttaatttcatgagaatagacaaaagttttttttgaaaaagat 31181003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 49341145 - 49341225
Alignment:
Q  347 gagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtgg 427  Q
    |||| |||||| |||||||||||||||| |||||  | ||||| ||||||  ||||||| ||||||||||||| |||||||    
T  49341145 gagttaagatcttcttcatttgcttaaaataaatggacaatgtcatttgggaagagatatatacaaaaaagtatatagtgg 49341225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 46918231 - 46918327
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||  ||||||||||||       |||||||||| ||||||||||||||||| | ||||  |||||| |||||| ||||||||    
T  46918231 aagttttataggaagatctaaaaacaattttcattggttattggttattgagaaaatgaaagagagtgcaaatggaatgcactttgcacttaatttt 46918327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 607
Target Start/End: Original strand, 16032988 - 16033045
Alignment:
Q  550 tgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttat 607  Q
    |||||| | |||| || |||||||||||||||||| |||||||||||| |||||||||    
T  16032988 tgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggttat 16033045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 655
Target Start/End: Original strand, 23209298 - 23209393
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggttat-------ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||||||||| |||||||||||| ||||||||||||||||        ||||||||||||| ||||  | | | |||||||||||||||||||||    
T  23209298 aagttttatagaaagatgaaaaaataatttttattggttattagttagagagaaaatgaaagggagaacataatgaatgcaatttgcatttaattt 23209393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 672
Target Start/End: Original strand, 23910580 - 23910625
Alignment:
Q  627 gaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||    
T  23910580 gaaaattgaatgtaatttgcatttaattatatgagaataaacaaaa 23910625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 657
Target Start/End: Complemental strand, 31126377 - 31126214
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||| || ||   |||||  | ||| |||| |||||| | |||| || ||||||||| | |||||| ||||| |||||| ||    
T  31126377 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattttcat 31126278  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  31126277 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 31126214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 606
Target Start/End: Complemental strand, 51309578 - 51309473
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||||||||||||||||  ||||||||  | ||||  | ||| |||| |||||| | ||||||| |||||| |||| |||||| | |||||||| ||||    
T  51309578 tcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttcttggaataagtttcatagaaagatgtataaacaattcttat 51309479  T
Q  601 tggtta 606  Q
    ||||||    
T  51309478 tggtta 51309473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 10014435 - 10014273
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| || | ||| || |  ||| || |||||||||||||||||| |||||||||||| ||    
T  10014435 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10014336  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| |||||||| ||| | |||| ||||| |||||| ||||| |||||||||    
T  10014335 tggtagttgattatagagaaaataaaaaatagagtaaattgaatgcactttgcttttaatttt 10014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 12403021 - 12402969
Alignment:
Q  412 aaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    ||||| ||||| ||||||||||||| |||||| |||||| |||||||||||||    
T  12403021 aaaaattagatggtggattctaccactaagtgagtcccaccattattaattat 12402969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 48084895 - 48084820
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||| |||||||| | |||||| | ||||| |||| | | |||| ||||||||||||||||| |||||||||||    
T  48084895 atttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattattt 48084820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 597 - 655
Target Start/End: Original strand, 12128725 - 12128783
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||| ||||| ||||||||||||| ||||| ||| |||||| |||||| |||||||||    
T  12128725 ttattagttatagagaaaatgaaagggagagcaaaataaatgtaatttgtatttaattt 12128783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 535
Target Start/End: Original strand, 46557122 - 46557156
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaattt 535  Q
    ||||||||||||||||||||||| |||||||||||    
T  46557122 tcacatttattaagaaaactaaagcataagaattt 46557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 550816 - 550888
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||||| || ||||| |||||||||| ||||| |||||| ||| || ||||||||||||| |||||||| ||||    
T  550816 atttggagaaagatatatacaaaaaa-tagatggtggatcctatcattaagtgggtcccaccattattatttat 550888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 4698930 - 4698991
Alignment:
Q  355 atcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaa 416  Q
    ||||||| ||||| || ||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  4698930 atcatctccatttactaaaaataaatagataatgtcatttggtgagagatagatacaaaaaa 4698991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 9189693 - 9189632
Alignment:
Q  354 gatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaa 415  Q
    |||| |||||||||| ||||| ||||| || ||||| ||||| ||||||||||||| |||||    
T  9189693 gatcctcttcatttgtttaaaataaatgaataatgtcatttgatgagagataaatataaaaa 9189632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 21654300 - 21654247
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  21654300 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 21654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 23513622 - 23513569
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  23513622 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 23513569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 26641177 - 26641230
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  26641177 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 26641230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 667
Target Start/End: Original strand, 36509527 - 36509583
Alignment:
Q  610 agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaa 667  Q
    ||||||||||| |||||||||||  |||| ||||| |||||||||| |||||||||||    
T  36509527 agaaaatgaaa-agagagaaaatcgaatgtaatttacatttaatttgatgagaataaa 36509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 354 - 419
Target Start/End: Complemental strand, 40494001 - 40493936
Alignment:
Q  354 gatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagta 419  Q
    |||| ||| ||||||||||||  ||||  | ||||||||||| ||||| |||||||||||||||||    
T  40494001 gatcctctccatttgcttaaaacaaatggacaatgttatttgatgagaaataaatacaaaaaagta 40493936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 43576012 - 43575959
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  43576012 ttatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaatttta 43575959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 46296142 - 46296195
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  46296142 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 46296195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 46580591 - 46580538
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  46580591 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 46580538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 546
Target Start/End: Original strand, 47866876 - 47866921
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagtt 546  Q
    ||||| ||||||| || |||||||||||||||||||||| ||||||    
T  47866876 tcacacttattaaaaagactaaaacataagaatttggagtatagtt 47866921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 51255241 - 51255188
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  51255241 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 51255188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 52172075 - 52172128
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  52172075 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 52172128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 52252091 - 52252038
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  |||||||||| || |||||||||||||||    
T  52252091 ttatggagaaaataaaaaagagaacaaattaaatgtaacttgcatttaatttta 52252038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 53020238 - 53020185
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  53020238 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 53020185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 6e-64; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 4058881 - 4058635
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||| |||||||||||        
T  4058881 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 4058782  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
       |||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||||  |||| | ||     
T  4058781 tggttattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataaataaaagtttttcttggaaaaaaagat 4058682  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||||| |||||| |||| |||||||    
T  4058681 ttttttaaaaaacaagattaaataggataaaagtttgtcttttttgc 4058635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 20281757 - 20281579
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  20281757 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20281658  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||    
T  20281657 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 20281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 47868045 - 47867873
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  47868045 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 47867946  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  47867945 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 47867873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 501 - 678
Target Start/End: Complemental strand, 20716346 - 20716162
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || ||  ||||| |||||||||||||||||| |||||| ||||||||||||       
T  20716346 tcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcat 20716247  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
        ||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  20716246 tggctattggttatggaaaaaatgaaagagtgagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagttttt 20716162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 29203672 - 29203485
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||| |||   ||||||||||||||| ||||||||||||       
T  29203672 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcat 29203573  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  29203572 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 29203485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 14332926 - 14332748
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||| ||||||||||||||||||||||||||||||||  || ||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||     
T  14332926 tcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 14332827  T
Q  600 ------ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
          ||||||||| | ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  14332826 tggccattggttatgaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 14332748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 501 - 660
Target Start/End: Complemental strand, 24940531 - 24940365
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||  ||||||||||||||||| ||||||| |||||||||||        
T  24940531 tcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgt 24940432  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatga 660  Q
       |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24940431 tggttattggttatggagaaaatgaaagagagagaaaattaaatgtaatttccatttaattttatga 24940365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 2229413 - 2229241
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||     
T  2229413 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 2229314  T
Q  600 ------ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
          ||||||||||| ||||||||||| | |||||||| |||| |||||||||||||| ||||||||||||    
T  2229313 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataa 2229241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 738
Target Start/End: Complemental strand, 39078322 - 39078080
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||| ||||||| ||||||||||||       
T  39078322 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata-gaagatgtaaaaacaattttcat 39078224  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        |||| ||||| || ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||| |||||||  |||||| ||     
T  39078223 tggctattagttattgaaaaaatgaaagagaaagaaaattgaatgtaatgtgcatttaattttatgagaataaacaaaagtttttcttggaaaaga-gat 39078125  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcattttt 738  Q
           ||||||||| |||||||||| |||||| |||| |||||    
T  39078124 tttataaaaaaacaaggttaaataggataaaagtttgtctttttt 39078080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 26916491 - 26916313
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||||     
T  26916491 tcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 26916392  T
Q  600 ------ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
          ||||||||||| ||||||||||| | | |||||| |||| |||||||||||||||||||||||||||||||||    
T  26916391 tggctattggttatggaaaaaatgaaagaaaaataaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 26916313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 505 - 740
Target Start/End: Original strand, 35310732 - 35310974
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||||  || ||| |||||| || | |||||| ||||||||||||           
T  35310732 atttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggc 35310831  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnn 697  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||| || ||||||||||         
T  35310832 tattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataaacaaaagtttttattgaaaaagatgattttt 35310931  T
Q  698 nnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
       |||||||||||||||||  | |||||| |||| |||||||    
T  35310932 ttaaaaaacaagattaaatataataaaagtttgtcttttttgc 35310974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 41414597 - 41414774
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| ||||||||  ||| ||||||||||||||||||||| |||||||||||||||    
T  41414597 tcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 41414696  T
Q  601 tggttat------ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||| |||       || ||||||||||||||| |||||| |||| ||||||||||||||||||| |||||||||||||    
T  41414697 tggctattgattatgaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 41414774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 501 - 678
Target Start/End: Complemental strand, 55580836 - 55580651
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||  |||||||||||| |||||||||||| ||||||||||||       
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcat 55580737  T
Q  598 ----tattggttatgg-agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
        |||| ||||||| | ||||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||||| ||||    
T  55580736 tggctattagttatggaaaaaaatgaaagaaagagaaattttaatgtaatttgcatttaattttatgagaataaacaaaagttttt 55580651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 28668987 - 28669164
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||||||||||||||  || |||||||| ||||||||  || ||||| |||||||||||| ||| |||||||||||| ||    
T  28668987 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcat 28669086  T
Q  601 tggttat------ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||||       || |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  28669087 tggttattagttatgaaaaaatgaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaa 28669164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 507 - 672
Target Start/End: Original strand, 56318062 - 56318234
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||| |||| |||||||||||||||| ||| || ||||| ||||||||  |||||||||| |||||||||||||| ||||||||||||       ||    
T  56318062 ttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcattagcta 56318161  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||    
T  56318162 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgataataaacaaaa 56318234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 5483264 - 5483451
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| || |||||||||||||||||||| |||||| || ||| |||| ||||||||  ||  || |||||| ||||||||||| |||||||||||| ||    
T  5483264 tcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcat 5483363  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||       |||||||||||||| ||||||||||||||| |||| ||| |||||||||||| ||||||||||||||||| |||||||    
T  5483364 tggctactggttatggagaaaatggaagagagagaaaattgaatgtaatatgcatttaatttcatgagaataaacaaaagtttttctt 5483451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 10069863 - 10069676
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||| |||||||||||||||||||||| || |||||||| ||| ||||  | | |||||||||||||| |||||| ||||||||||||       
T  10069863 tcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcat 10069764  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| ||| ||||||| |  ||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||    
T  10069763 tggctattggttatggaaaaagtgaaagaaaaggaaaattgaatgttatttgcatttaattttatgagaataaacaaaagtttttctt 10069676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 501 - 687
Target Start/End: Original strand, 1585335 - 1585526
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| || ||||||||| |||||||||||| ||||||| ||| ||||  |||||||  ||| || |||||| || | ||||||  ||||||||||||||    
T  1585335 tcacacttgttaagaaaagtaaaacataagattttggagtataatttt--gtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttat 1585432  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||       |||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  1585433 tggctattgattatggagaaaatggaagagagagaaaattgaatgtaattttcatttaattttatgagaataaacaaaagcatttcttaaaaaa 1585526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 501 - 727
Target Start/End: Original strand, 17794527 - 17794763
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||| | ||||||||| || |||||||| || |||||  ||| || || ||||||||||||||| |||||||||||| ||    
T  17794527 tcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcat 17794626  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctta---aaaaagat 690  Q
    |||       ||||||| ||| || ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||| |||    |||||||    
T  17794627 tggctattgattatggaaaaattggaagagagagaaaattgaatgtaatttacatttaattttatgagaataaacaaaagtttttattattggaaaagat 17794726  T
Q  691 gannnnnnnnaaaaacaagattaaataggagaaaagt 727  Q
    ||        |||||||||||||||||||| ||||||    
T  17794727 gatattttaaaaaaacaagattaaataggataaaagt 17794763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 501 - 644
Target Start/End: Complemental strand, 7654783 - 7654633
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||       
T  7654783 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcat 7654684  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaattt 644  Q
        ||||| ||||||| ||||||||||| |||||||||| |||| |||||    
T  7654683 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaattt 7654633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 507 - 644
Target Start/End: Original strand, 16604838 - 16604982
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||||||  ||| |||||||||||||||||||||  |||||||||||       ||    
T  16604838 ttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggcta 16604937  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaattt 644  Q
    || |||||||| |||||||||||||||||||||| |||| |||||    
T  16604938 ttagttatggaaaaaatgaaagagagagaaaattgaatgtaattt 16604982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 502 - 666
Target Start/End: Complemental strand, 42915695 - 42915523
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    |||| ||||||| |||||||||| ||||||||||| || |||||||| ||||||||  |||||| |||||| || | |||||| ||||||||||||        
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T
Q  598 ---tattggttatgg-agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  42915595 ggcaattggttatggaaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 42915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 501 - 692
Target Start/End: Original strand, 48793616 - 48793810
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||| |||||||||||| || |||||||  ||||||||  |||||| |||||| || |||||||| ||||||||||||       
T  48793616 tcacacttattaagaaaactaaagcataagaatttgtagcatagttt--tgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 48793713  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
         |||||||||| | |||||  || ||||||||||||||||| |||||||||||||||| ||||||||||  ||||| |||| ||  |||||||||    
T  48793714 tggcaattggttatgaaaaaaat--aaaagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattggaaaagatga 48793810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 598 - 681
Target Start/End: Original strand, 52535675 - 52535758
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||||||||| || ||| |||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||    
T  52535675 tattggttatagaaaaagtgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaagtttttctt 52535758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 53848626 - 53848471
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||| ||||||||  | |||| |  |||||||  |||||| | |||| || || ||||||||||||| | |||||||||||| ||    
T  53848626 tcacacttattaagaaaacaaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaattttaat 53848527  T
Q  601 tggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||| || ||||||||||||| || ||||| |||||| |||||||||| ||||    
T  53848526 tggttattgaaaaaatgaaagagaaagcaaattgaatgcactttgcatttattttt 53848471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 507 - 584
Target Start/End: Complemental strand, 16473908 - 16473831
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatg 584  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||||||||  ||| |||||||||||||||||||||    
T  16473908 ttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatg 16473831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 509 - 654
Target Start/End: Complemental strand, 32203371 - 32203226
Alignment:
Q  509 attaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatg 608  Q
    ||||| |||||||||||||||||||||  || |||||||| |||  |||  ||| || ||||||||| |||||||  |||||||||||| ||||||||||    
T  32203371 attaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttcattggttatg 32203272  T
Q  609 gagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatt 654  Q
     | ||||||||| | |||||||||| |||| || || |||||||||    
T  32203271 aaaaaaatgaaacatagagaaaattgaatgtaaattacatttaatt 32203226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 8683292 - 8683462
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||| ||||||||| |||||||||||| || |||||||| ||||||||  |||||| |||||| || | || ||| ||||| ||||||       
T  8683292 tcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcat 8683391  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
         |||||||||||| |||||  || ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  8683392 tggcaattggttatggaaaaaat--aaaagagagaaaattaaatgtaatttgtatttaatttcatgagaataa 8683462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 651
Target Start/End: Original strand, 17799124 - 17799277
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------t 597  Q
    |||||||||||||||||||| || | ||||||||| ||| |||   ||||| | |||||||  |||||||| |||||||| |||||||||||       |    
T  17799124 atttattaagaaaactaaaatatgataatttggagtataatttctggtgttcttcttggaattagttttatgggaagatgtaaaaacaattttcattggt 17799223  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcattta 651  Q
    |||| |||||||||||||||| || ||||  |||||||||||||||||||||||    
T  17799224 tatttgttatggagaaaatgagagggagaacaaattaaatgcaatttgcattta 17799277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 692
Target Start/End: Original strand, 21722668 - 21722850
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||| |||||||||||||||||||||  || ||||| || | ||||||  ||| || |||||||||||||||||| ||||| |||||| ||    
T  21722668 tcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcat 21722767  T
Q  601 tggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    ||  ||| || ||           |||||||||||||| |||||| ||||||||| ||||||||||||||||| |||| || ||||||||||    
T  21722768 tgactattgataacc---------gagaaaattaaatgtaatttgtatttaatttcatgagaataaacaaaagttttttttgaaaaagatga 21722850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 681
Target Start/End: Complemental strand, 35529734 - 35529651
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    ||||||||||||| ||||||||||||||| |||||| || | |||||||||||||||||||||| ||||||||||  |||||||    
T  35529734 tattggttatggaaaaaatgaaagagagataaaattgaaagtaatttgcatttaattttatgagcataaacaaaactttttctt 35529651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 5064641 - 5064803
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||| ||||||||||||||||||||||  |||||| |  ||| |||| |||||| |  ||| || |||||||| ||||||||| |||||||||||| |     
T  5064641 tcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttcat 5064740  T
Q  600 ------ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
          ||| |||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  5064741 tagtagttgattatagagaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 5064803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 8013075 - 8013237
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||||||||||||||||||||||||||  | |||| |  |||||||  |||||| | |||| || |||||| |||| |||||| |||||||||||||||    
T  8013075 tcacatttattaagaaaactaaaacatagtagtttgtaacatagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 8013174  T
Q  601 tggtt-------atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||       || ||||||||||||||||||  | | | ||||||| ||||||||||||||    
T  8013175 tggttattagtcatagagaaaatgaaagagagaacataatgaatgcaaattgcatttaatttt 8013237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 8178291 - 8178387
Alignment:
Q  567 aagttttataggaagatgaaaaaacaattt-------ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||| ||||||| |||||||||||       ||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  8178291 aagttttataagaagatgtaaaaacaatttgtattggttattggttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8178387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 14583895 - 14583717
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaa-aagttttataggaagatgaaaaaacaattttta 599  Q
    |||||||||||||||||||||||| ||||||||||     |||||| | |||||||| |||  ||| |||||| || |||||||| ||||||| |||| |    
T  14583895 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaaca-ttttca 14583797  T
Q  600 ttggttatgga-------gaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||| ||||||       ||||||| ||||||| || |||| |||| |||||||||||||||| |||||||||| |||||    
T  14583796 ttggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataagcaaaa 14583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 12002619 - 12002675
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgtttt 557  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  12002619 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 12002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 687
Target Start/End: Complemental strand, 50145843 - 50145709
Alignment:
Q  560 ttggaaaaagttttataggaagatgaaaaaacaatttttattggttat-------ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaa 652  Q
    |||||| ||||||||| |||||||| ||| |||||||| ||||| |||       |||||||||| ||||||| |||||||||||| ||||  |||||||    
T  50145843 ttggaataagttttatgggaagatgtaaacacaattttcattggctattgataatggagaaaatggaagagagggaaaattaaatgtaattaacatttaa 50145744  T
Q  653 ttttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    ||| |||| |||| ||||||| ||||||| |||||    
T  50145743 tttcatgaaaatatacaaaagtttttctttaaaaa 50145709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 346 - 441
Target Start/End: Original strand, 56269319 - 56269414
Alignment:
Q  346 tgagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtggattctaccaataag 441  Q
    |||||||||||   ||||||||||||||| |||||  | ||||| |||||||||||||||||||||||||||||  |||||| | |||||| ||||    
T  56269319 tgagtaaagatttccttcatttgcttaaagtaaatggataatgtcatttggtgagagataaatacaaaaaagtatgtagtgggtcctaccactaag 56269414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 656
Target Start/End: Original strand, 46070517 - 46070668
Alignment:
Q  509 attaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------ttatt 601  Q
    ||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||| |||||||||||       || ||    
T  46070517 attaagaaaactaaaacatagtagtttgtaacatagtttt-tgtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgtt 46070615  T
Q  602 ggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||| |||||||||||  |||||| ||||| |||||| |||||||||||||||    
T  46070616 ggttattgagaaaatgaa--agagagtaaattgaatgcactttgcatttaatttt 46070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 569 - 656
Target Start/End: Original strand, 23978169 - 23978263
Alignment:
Q  569 gttttataggaagatgaaaaaacaatttttattggt-------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||| |||||||||||| ||||||       ||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 23978263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 541 - 656
Target Start/End: Original strand, 47516217 - 47516339
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtt-------atggagaaaatgaaagagagagaaaatt 633  Q
    |||||||| |||||| |  ||| || |||||||||||||||| | |||||||||||| |||||||       || ||||||||||||||||||| ||||     
T  47516217 atagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggttattgagaaaatgaaagagagagcaaatc 47516316  T
Q  634 aaatgcaatttgcatttaatttt 656  Q
    ||||||| |||| ||||||||||    
T  47516317 aaatgcactttgtatttaatttt 47516339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 50080442 - 50080615
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||| |||| ||||||||  || | | ||     || |||| ||  |||| ||||||||||    
T  50080442 tcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttttgtataa-----atgggaaaatataaaaccaatttttat 50080536  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||       ||||||| |||||| ||||||| ||||||| |||| |||||||||||||||| ||| |||||| |||||    
T  50080537 tggctattgattatggataaaatggaagagagtgaaaattgaatgtaatttgcatttaatttcatgcgaataagcaaaa 50080615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 622 - 687
Target Start/End: Complemental strand, 31280237 - 31280172
Alignment:
Q  622 agagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||||||||||| |||||| |||| ||||||||| || |||||||||||||| ||||||| |||||    
T  31280237 agagagaaaattgaatgcagtttgtatttaatttcattagaataaacaaaagtttttctttaaaaa 31280172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 681
Target Start/End: Original strand, 32323252 - 32323434
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg- 603  Q
    |||| ||||||||| |||||  ||| |||||| || || ||||| ||||||||  ||  || ||| ||||| |||||||| |||||||||||| ||||      
T  32323252 atttgttaagaaaattaaaatttaaaaatttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttcattgac 32323351  T
Q  604 ------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
          |||| ||||||||| ||||||||||||||| || | ||||| |||||||||| |||| ||||| |||||| |||||||    
T  32323352 gcttgattattgagaaaatggaagagagagaaaattgaa-gtaatttacatttaatttcatgataataagcaaaagtttttctt 32323434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 502 - 656
Target Start/End: Original strand, 5841766 - 5841927
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    |||||||||| | ||||||||| ||||  | |||| |  |||||||  |||||| | |||| || || ||||||||||||||| ||||| ||||||        
T  5841766 cacatttatttataaaactaaagcatagtagtttgcaacatagtttcttgtgttatccttgaaataaattttataggaagatgtaaaaataattttcatt 5841865  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
       |||||||||| || |||||||||||||||| ||||| | |||| |||||||| ||||||    
T  5841866 ggttattggttattgaaaaaatgaaagagagagcaaattgattgcactttgcattgaatttt 5841927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 548
Target Start/End: Complemental strand, 7438810 - 7438767
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagtttt 548  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  7438810 atttattaagaaaactaaaacataataatttggagtatagtttt 7438767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 12312477 - 12312548
Alignment:
Q  393 ttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||| |||||||| | | |||||| ||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  12312477 ttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatcatcattaattat 12312548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 507 - 550
Target Start/End: Original strand, 52535589 - 52535632
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttct 550  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  52535589 ttattaagaaaactaaagcataagaatttggagtatagttttct 52535632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 672
Target Start/End: Original strand, 25297312 - 25297386
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||| |||||||||||||  ||||||  ||||||| |||| ||||| |||||||||| |||||||||| |||||    
T  25297312 tattgattatggagaaaatagaagagatggaaaattgaatgtaatttacatttaatttcatgagaataagcaaaa 25297386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 657
Target Start/End: Original strand, 29180371 - 29180534
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||| || ||   |||||  | ||| |||| |||||| | ||||||| |||||| |||| |||||| ||||| |||| | ||    
T  29180371 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatagaaagatgtaaaaataattctcat 29180470  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  29180471 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 29180534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 37788502 - 37788449
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  ||||||||||||| |||||||||||||||    
T  37788502 ttatggagaaaataaaaaagagaacaaattaaatgcaagttgcatttaatttta 37788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 38543931 - 38543886
Alignment:
Q  374 actaaataaagaatgttatttggtgagagataaatacaaaaaagta 419  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||    
T  38543931 actaaatagataatgttattcggtgagagataaatacaaaaaagta 38543886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 657
Target Start/End: Complemental strand, 40411199 - 40411104
Alignment:
Q  569 gttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    |||||||||||||||| ||||||||||||||||||       |||  |||||||||||| |||||  ||||| |||||| ||| ||||||||||||    
T  40411199 gttttataggaagatgtaaaaacaatttttattggtagttgattacagagaaaatgaaaaagagatcaaattgaatgcagtttacatttaatttta 40411104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 657
Target Start/End: Complemental strand, 50768562 - 50768443
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta-------tggagaaaatgaaagagagagaaaattaaat 637  Q
    |||| |||||||| ||||||| |||||| || | |||||| ||||| |||||| ||||||||       |||||||||| |||  ||||  |||||||||    
T  50768562 ttttttgtgttttccttggaataagtttcatggaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaat 50768463  T
Q  638 gcaatttgcatttaatttta 657  Q
    |||| |||||||||||||||    
T  50768462 gcaacttgcatttaatttta 50768443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 52713114 - 52713061
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  |||||||||||||||||||||||||||||    
T  52713114 ttatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaatttta 52713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 418 - 466
Target Start/End: Complemental strand, 1871326 - 1871278
Alignment:
Q  418 tagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||||||||| |||| | ||||||||||||||||| |||||||||||    
T  1871326 tagatagtggatcctactactaagtgggtcccatcatcattaattattt 1871278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 6982690 - 6982752
Alignment:
Q  354 gatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaa 416  Q
    |||||||| ||| |||||||| |||||| ||||||| ||||||||||| ||  ||||||||||    
T  6982690 gatcatctccatctgcttaaaataaatagagaatgtaatttggtgagatattgatacaaaaaa 6982752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 27790335 - 27790265
Alignment:
Q  346 tgagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaa 416  Q
    |||||||||||| ||||||||| ||||||  ||||| | |||||||||||||| |||| ||| || |||||    
T  27790335 tgagtaaagatcttcttcatttacttaaaacaaatagataatgttatttggtgggagagaaacaccaaaaa 27790265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 31862244 - 31862294
Alignment:
Q  416 agtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    ||||||| |||||| |||||| ||||||||||||| ||| |||||||||||    
T  31862244 agtagatggtggatcctaccactaagtgggtcccaccatcattaattattt 31862294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 34778489 - 34778424
Alignment:
Q  398 gagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||||||| | |||||||| ||||| |||||| |||||| ||||||||||||| ||| |||||||||    
T  34778489 gagagatagacacaaaaaa-tagatggtggatcctaccactaagtgggtcccaccatcattaattat 34778424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 40553832 - 40553774
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||| |||||||||||| |||||  ||||| ||| | |||||||||||||||||||||    
T  40553832 ttattagttatggagaaagtgaaaaggagagtaaaatgaatgcaatttgcatttaattt 40553774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 567 - 656
Target Start/End: Complemental strand, 49080357 - 49080261
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||| |||||       |||  | |||||||||| |||||  ||||| |||||| |||||||||||||||    
T  49080357 aagttttataggaagatgtaaaaacaattttcattggtagttgattacagggaaaatgaaaaagagatcaaattgaatgcactttgcatttaatttt 49080261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 658
Target Start/End: Complemental strand, 49902078 - 49902024
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttat 658  Q
    ||||||||||||| |||  ||||  ||||| ||||||||||||||||||||||||    
T  49902078 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttat 49902024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 464
Target Start/End: Original strand, 18207059 - 18207112
Alignment:
Q  411 aaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||||| ||||| |||| | |||||| ||||||||||||||||| |||||||||    
T  18207059 aaaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattat 18207112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 606
Target Start/End: Complemental strand, 29899876 - 29899771
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||| || ||   |||||  | ||| |||| |||||| | ||||||| ||||||||| | |||||| ||||| |||| | ||    
T  29899876 tcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcat 29899777  T
Q  601 tggtta 606  Q
    ||||||    
T  29899776 tggtta 29899771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 30776553 - 30776606
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  30776553 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 30776606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 30777538 - 30777485
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  30777538 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 30777485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 38187795 - 38187848
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  ||||| ||||||| |||||||||||||||    
T  38187795 ttatggagaaaataaaaaagagaacaaattgaatgcaacttgcatttaatttta 38187848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 39970058 - 39970111
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  39970058 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 39970111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 47807246 - 47807193
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  47807246 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 47807193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 51495200 - 51495147
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  51495200 ttatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaatttta 51495147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 53677548 - 53677601
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  53677548 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 53677601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 9e-60; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 34890168 - 34890355
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  34890168 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 34890267  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  34890268 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 34890355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 472 - 672
Target Start/End: Original strand, 43216312 - 43216519
Alignment:
Q  472 ccctccatcccaaattataagnnnnnnnntcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagtt 571  Q
    |||||| ||||||||||||||        ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| ||||||||    
T  43216312 ccctccgtcccaaattataagaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagtt 43216411  T
Q  572 ttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaat 664  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  43216412 ttataggaagatgtaaaaacaattttcattcactattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaat 43216511  T
Q  665 aaacaaaa 672  Q
    ||||||||    
T  43216512 aaacaaaa 43216519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 36190938 - 36190692
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| || |||||||||||||||||||||||||| ||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  36190938 tcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 36190839  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        ||||||||||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||  |||| |        
T  36190838 tggctattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaatagatt 36190739  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||||| ||||||||||| |||||||    
T  36190738 tttttttaaaaacaagattaaataggataaaagtgtgtcttttttgc 36190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 7858694 - 7858516
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  7858694 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcat 7858595  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         |||| ||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  7858594 tgaccattgattatggaaaaaatgaaagagagagaaaattgaaagtaatttgcatttaattttatgagaataaacaaaa 7858516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 7022397 - 7022569
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||  ||||| ||||||       
T  7022397 tcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcat 7022496  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  7022497 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 7022569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 502 - 740
Target Start/End: Complemental strand, 24893006 - 24892759
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaa---aaacaatttt- 597  Q
    |||| |||||||||||||| |||||||||||||| ||| |||||||| ||||||||  |||||||| ||||||||||| |||  ||   ||||||||||     
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttc 24892907  T
Q  598 ------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
          ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||   ||||| |    
T  24892906 attggctattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgggaaaga-g 24892808  T
Q  692 annnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
    |        |||||||||||||||||||| |||||| |||| |||||||    
T  24892807 atttttttaaaaaacaagattaaataggataaaagtttgtcttttttgc 24892759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 527 - 687
Target Start/End: Complemental strand, 31734255 - 31734088
Alignment:
Q  527 taagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaa 619  Q
    ||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||  ||||||||||||       |||||| |||||| ||||||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatggaaaaaatgaa 31734156  T
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  31734155 agagagagaaaattgaatgtaatttgcatttaatttgatgagaataaacaaaagtttttcttgaaaaa 31734088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 26483698 - 26483526
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||| ||||||||  ||| ||||||||||||||| ||||| ||||||||||||       
T  26483698 tcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 26483599  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||| ||||||| ||||||||||| |||||||||| |||| ||||| |||||||||||| ||||||||    
T  26483598 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttacatttaattttacgagaataa 26483526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 8712038 - 8711855
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||| ||||||||||||||    ||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||| ||||||       
T  8712038 tcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgttttt-ttggaaaaagttttataggaagatgtaaaaataattttcat 8711944  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaa-ttttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| ||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  8711943 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaatttttatgagaataaacaaaagtttttctt 8711855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 508 - 673
Target Start/End: Complemental strand, 28348769 - 28348598
Alignment:
Q  508 tattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tat 600  Q
    ||||| |||||  ||||||||||||||||||| ||||| || ||| ||||  ||||||||||||||||||||| ||| |||||||||||        |||    
T  28348769 tattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattggctat 28348670  T
Q  601 tggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaag 673  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  28348669 tggttatgga-aaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaaccaaag 28348598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 504 - 672
Target Start/End: Original strand, 15824634 - 15824803
Alignment:
Q  504 catttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-tattg 602  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||||||  || ||| |||||| || | |||||| ||||||||||   |||||    
T  15824634 catttagtaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattggctattg 15824733  T
Q  603 gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||| | |||||| ||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||    
T  15824734 gttatgaaaaaaatggaagagagagaaaatttaatgtaattttcatttaatttcatgagaataaacaaaa 15824803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 34158284 - 34158463
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgctt-ggaaaaagttttataggaagatgaaaaaacaatttt-- 597  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||  ||||||||  ||   ||||||||||||||||||||| ||||||||||||      
T  34158284 tcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttca 34158383  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         ||||||||||| | ||||  |||||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  34158384 ttgactattggttatgaaaaaaacaaaagagagagaaaattgaatgtaatttgcatttaattttatgataataaacaaaa 34158463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 515 - 672
Target Start/End: Original strand, 15957919 - 15958085
Alignment:
Q  515 aaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttat 607  Q
    |||||||||| ||||||| |||||| |||||||  ||||||||  ||| ||||||||||||||||| | | ||||||||||||       ||||||||||    
T  15957919 aaaactaaaatataagaaattggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttat 15958018  T
Q  608 ggagaaaatgaaagag--agagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||| ||||||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  15958019 ggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 15958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 505 - 672
Target Start/End: Original strand, 41086384 - 41086558
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    |||||||||||||||||||  |||| |||||| |  |||||||| ||||||||  ||| |||||||||||||  |||||| ||||||||||||           
T  41086384 atttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggc 41086483  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||| ||||| ||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  41086484 tattggtaatggaaaaaataaaacagagagaaaattcaatgtaatttgcatttaattttatgagaataaacaaaa 41086558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 527 - 689
Target Start/End: Complemental strand, 13143904 - 13143735
Alignment:
Q  527 taagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaa 619  Q
    |||||||||| || ||| |||| ||||||||  ||| ||||||||| ||||||||||| |||||||||||| |||||       || |||  ||||||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggttgtgggaaaaatgaa 13143805  T
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  13143804 agagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgaaaaaga 13143735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 520 - 689
Target Start/End: Original strand, 35456038 - 35456213
Alignment:
Q  520 taaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggaga 612  Q
    ||||||||||||||||| || |||||||| | ||||||  ||| |||||||||||||| |||||| |||||||||||| |||||       ||||||| |    
T  35456038 taaaacataagaatttgaagtatagttttttatgttttttttg-aaaaagttttatagaaagatgtaaaaacaattttcattggctattaattatggaaa 35456136  T
Q  613 aaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
    |||| |||||||||||||| | |||| ||||| |||||||||||||||||||||||||||| | ||||| |||||||    
T  35456137 aaataaaagagagagaaaaatgaatgtaatttacatttaattttatgagaataaacaaaagttcttcttgaaaaaga 35456213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 13143939 - 13144142
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaa-gttttataggaagatgaaaaaacaatttt-- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| ||||| |||||||||||||||| ||||||||||||      
T  13143939 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttca 13144038  T
Q  598 -----tattggttatggagaaaatgaaagag----------------agagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctt 676  Q
         ||||||||||||| ||||||||||||                |||||||||| |||| ||||||||||||||||||||| |||||||||||| ||    
T  13144039 ttagttattggttatgga-aaaatgaaagagagagagagagagagagagagaaaattgaatgtaatttgcatttaattttatgaaaataaacaaaagttt 13144137  T
Q  677 ttctt 681  Q
    |||||    
T  13144138 ttctt 13144142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 501 - 652
Target Start/End: Original strand, 30575828 - 30575987
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaag-ttttataggaagatgaaaaaacaatttt-- 597  Q
    ||||| ||||||||||||||||||||||| ||||||||| | |||||| ||||||||  ||  |||||| ||||| ||||| ||| ||||||||||||      
T  30575828 tcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttca 30575927  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaa 652  Q
         ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  30575928 ttggctattggttatggaaaaaatgaaagagagagaaaattaaaagtaatttgcatttaa 30575987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 503 - 672
Target Start/End: Original strand, 8107613 - 8107789
Alignment:
Q  503 acatttattaagaaaactaaaacataagaatttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    ||||||||||| |||| ||||| |||||||||||||| |||||||| | || ||||  ||| ||||||||||| |  | |||| ||||||||||||        
T  8107613 acatttattaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcatt 8107712  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
       ||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  8107713 ggctattggttatggataaa-tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaaaaaaa 8107789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 501 - 691
Target Start/End: Original strand, 29920262 - 29920459
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||| || | | |||| |||||| |  |||||| |||||| || |||||||| ||||||||||||       
T  29920262 tcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcat 29920361  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
        ||||| ||||||| |||||  ||||||| ||||||| |||| |||| | ||||||||| |||||||||| |||||| |||||||  ||||||||    
T  29920362 tggctattgattatggacaaaatagaagagagggaaaattgaatgtaattggtatttaatttcatgagaataagcaaaaggttttcttggaaaagatg 29920459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 501 - 686
Target Start/End: Original strand, 8709780 - 8709970
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||| ||| ||||||||||||||||||||||||| |||||||| ||||||||  ||| || |||| | || |||||| | ||||||| |||| ||    
T  8709780 tcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttcat 8709879  T
Q  601 tg-------gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaa 686  Q
    ||       ||||||||||||||  |||||  |||||||| |||| |||||||||||||||||||||||||||  ||||| ||||||| ||||    
T  8709880 tgactatatgttatggagaaaatagaagag--agaaaattgaatgtaatttgcatttaattttatgagaataagaaaaagtttttcttgaaaa 8709970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 515 - 738
Target Start/End: Complemental strand, 35525737 - 35525521
Alignment:
Q  515 aaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttat 607  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||  ||| ||||||||||| ||||||||| ||||||||||||       ||||||||||    
T  35525737 aaaactaaaacataagaatttagagtatagtttt--gtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttat 35525640  T
Q  608 ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnnnnnaaaaaca 707  Q
    ||| ||||| |||||||||||||||| ||||           |||||||||||||||||||||||| |||||||  |||||| ||        |||||||    
T  35525639 ggaaaaaataaaagagagagaaaatttaatg-----------taattttatgagaataaacaaaagtttttcttggaaaaga-gattttttagaaaaaca 35525552  T
Q  708 agattaaataggagaaaagtgtgtcattttt 738  Q
    ||||||||||||| |||||| |||| |||||    
T  35525551 agattaaataggataaaagtttgtctttttt 35525521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 502 - 656
Target Start/End: Original strand, 41362302 - 41362463
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttatt 601  Q
    |||||||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||| |||||||||||| |||    
T  41362302 cacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 41362401  T
Q  602 gg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||       |||| |||||||||||| || ||| |||||||||||| |||||||||||||||    
T  41362402 ggtagttgattatagagaaaatgaaaaagtgagcaaattaaatgcactttgcatttaatttt 41362463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 568 - 656
Target Start/End: Original strand, 14576213 - 14576301
Alignment:
Q  568 agttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||| |||||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  14576213 agttttatagaaagatgtaaaaataattttcattggttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 14576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 617
Target Start/End: Original strand, 40773397 - 40773513
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||||||||||| |||||||||| |||| ||||||||| ||| |||| |||||||| ||  ||| ||||||||   ||||||| ||||| |||||||||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttttctaagaataagttttaacagaagatgtaaaaataatttttat 40773496  T
Q  601 tggttatggagaaaatg 617  Q
    |||||||||||||||||    
T  40773497 tggttatggagaaaatg 40773513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 515 - 692
Target Start/End: Original strand, 16879400 - 16879583
Alignment:
Q  515 aaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttat 607  Q
    |||||||||| ||||||||||| || ||| |||| ||||||||  ||| || || ||| || |||| ||| |||||||||||||||||        ||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattat 16879499  T
Q  608 ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    || ||||||||||||||||||||||| |||| | |||| ||||||||| || |||||||||||||| |||||||  |||||||||    
T  16879500 ggtgaaaatgaaagagagagaaaattgaatgtagtttgtatttaatttcataagaataaacaaaag-ttttctttgaaaagatga 16879583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 599 - 666
Target Start/End: Original strand, 4046993 - 4047060
Alignment:
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  4046993 attggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 4047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 672
Target Start/End: Complemental strand, 7499789 - 7499714
Alignment:
Q  598 tattggttatggagaaaa-tgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||||| |||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  7499789 tattggttatggaaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgagaataaacaaaa 7499714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 501 - 607
Target Start/End: Complemental strand, 8712690 - 8712584
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||||||||||||||||||||||||||  || ||| ||  ||||||  |||||| |  |||||| ||||||||||| |||||| |||||||||||||||    
T  8712690 tcacatttattaagaaaactaaaacatagtaacttgcagtttagtttcttgtgttattattggaataagttttatagaaagatgtaaaaacaatttttat 8712591  T
Q  601 tggttat 607  Q
    |||||||    
T  8712590 tggttat 8712584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 576 - 661
Target Start/End: Original strand, 3642039 - 3642130
Alignment:
Q  576 aggaagatgaaaaaacaatttt------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgag 661  Q
    ||||||||| ||||||||||||      ||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  3642039 aggaagatgtaaaaacaattttattggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcattttattttatgag 3642130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 8745747 - 8745645
Alignment:
Q  503 acatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattg 602  Q
    ||||||||||||||||||||||||||  | |||| |  |||||||  |||||| | |||| || |||||||||||||||||| |||||||||||| ||||    
T  8745747 acatttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttattcttgaaataagttttataggaagatgtaaaaacaattttcattg 8745648  T
Q  603 gtt 605  Q
    |||    
T  8745647 gtt 8745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 17713389 - 17713227
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||| ||||||| ||||||||||||||  | |||| |  |||||||  |||||| | |||| || |||||||||||||||||  |||||||||||        
T  17713389 tcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttcat 17713290  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
       ||||||||||| || |||||| ||||||||| | ||| |||||| |||||||||||||||    
T  17713289 tggttattggttattgaaaaaatggaagagagagcacattgaatgcactttgcatttaatttt 17713227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 602
Target Start/End: Original strand, 16358106 - 16358206
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| ||||| |||| |||||| || |||||||| | |||||| ||| |||||||||| ||||||||||| |||| ||||||| ||    
T  16358106 tcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgtttt-ctttgaaaaagtttcataggaagatgtaaaatcaattttcat 16358204  T
Q  601 tg 602  Q
    ||    
T  16358205 tg 16358206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 2628158 - 2628320
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||| ||||||||||||| ||||||||  | |||| |  |||||||  |||||| | |||  || |||||||||||||||||| ||||| |||||        
T  2628158 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagtttcttgtgttatccttaaaataagttttataggaagatgtaaaaataattttcat 2628257  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
       |||||| |||| ||||||||||||||||||| ||||| ||| || |||||||| ||||||    
T  2628258 tggttattgcttattgagaaaatgaaagagagagcaaattgaattcactttgcattaaatttt 2628320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 597 - 673
Target Start/End: Complemental strand, 41755988 - 41755913
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaag 673  Q
    |||||| ||||||| ||||||||||||||| |||||| |||| ||||| |||||||||| |||| ||||||||||||    
T  41755988 ttattgcttatgga-aaaatgaaagagagaaaaaattgaatgtaatttacatttaatttcatgataataaacaaaag 41755913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 570 - 656
Target Start/End: Original strand, 25195109 - 25195202
Alignment:
Q  570 ttttataggaagatgaaaaaacaatttttattggt-------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||||||| |||||||||||| ||||||       ||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  25195109 ttttataggaagatgtaaaaacaattttcattggtggttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 25195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 26954452 - 26954548
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggtt-------atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||| |||||||       || |||||||||||||||| || ||| | |||||| |||||||||||||||    
T  26954452 aagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagagaaagcaaaatgaatgcactttgcatttaatttt 26954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 657
Target Start/End: Original strand, 25321624 - 25321743
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta-------tggagaaaatgaaagagagagaaaattaaat 637  Q
    ||||||||||| | ||||||| ||||||||| | |||||| ||||| |||||| || |||||       |||||||||| |||  ||||| |||||||||    
T  25321624 ttttctgtgttctccttggaataagttttatggaaagatgtaaaaataattttcataggttaaaaattatggagaaaataaaaaggagagcaaattaaat 25321723  T
Q  638 gcaatttgcatttaatttta 657  Q
    |||| |||||||||||||||    
T  25321724 gcaacttgcatttaatttta 25321743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 501 - 657
Target Start/End: Complemental strand, 34713695 - 34713532
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||| || ||   |||||  | ||| |||| |||||||| |||| || ||||||| ||| |||||| ||||| |||| | ||    
T  34713695 tcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttcttgaaataagttttctagaaagatgtaaaaataattctcat 34713596  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  34713595 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 34713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 666
Target Start/End: Complemental strand, 2052937 - 2052830
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaatttttattggttat-------ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||| |||||||| |||||||||||| ||||| |||       |||||||||  ||||||||  ||||| |||| ||||||||||||||||     
T  2052937 aaaaagttttatgggaagatgtaaaaacaattttcattggctattggctagggagaaaatagaagagaga--aaattgaatgtaatttgcatttaatttc 2052840  T
Q  657 atgagaataa 666  Q
    ||||||||||    
T  2052839 atgagaataa 2052830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 17336908 - 17336746
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||| |||  | |||| |  |||||||| |||||  |  ||| || || ||||||||||||||| |||||||||||| ||    
T  17336908 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttcat 17336809  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| ||| ||||||||  ||||| ||||| |||||| |||||||||||||||    
T  17336808 tggtagttgattatagagtaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 17336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 44663786 - 44663885
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||  |||||||||| ||| ||||||   ||||||||  |||||| || |||||| | |||||| ||||| |||||||||    
T  44663786 tcacacttattaagaaaactaaattataagaatttagagtatagtt---tgtgttttctttggaataaattttatggaaagatgtaaaaataatttttat 44663882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 501 - 655
Target Start/End: Complemental strand, 5217557 - 5217397
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||| |||||| | | ||| ||  ||||||  |||||| | |||| || |||||| |||| |||||| |||||||||||||||    
T  5217557 tcacacttattaagaaaactataacata-gtagttgcagcgtagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 5217459  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    |||       |||| |||||||||||||||| || | | | ||||||| |||||||||||||    
T  5217458 tggttattagttatagagaaaatgaaagagaaagcataatgaatgcaaattgcatttaattt 5217397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 597 - 656
Target Start/End: Complemental strand, 27819722 - 27819663
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||| |||||||| |||| ||||| |||||||||| | |||||||||||||||    
T  27819722 ttattggttatagagaaaataaaagggagagcaaattaaatgtagtttgcatttaatttt 27819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 501 - 548
Target Start/End: Complemental strand, 45190750 - 45190703
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagtttt 548  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||    
T  45190750 tcacacttgttaagaaaactaaaacataagaatttggagcatagtttt 45190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 2053029 - 2052947
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagat 583  Q
    ||||| ||||||||||||||||||||||| |||| | || ||| |||| ||||||||  || ||| ||||||||| |||||||    
T  2053029 tcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataagttttatgggaagat 2052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 654
Target Start/End: Complemental strand, 38072329 - 38072169
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||||||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| |  ||||||||||  || ||| |||||||||||| ||    
T  38072329 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttcat 38072230  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatt 654  Q
    |||       |||| |||||||||||| | |||| ||||| |||||| |||| ||||||||    
T  38072229 tggtagttgattatagagaaaatgaaaaaaagagcaaattgaatgcactttgtatttaatt 38072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 657
Target Start/End: Complemental strand, 27621297 - 27621134
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||| || ||   ||||| || ||| |||| |||||| | ||||||| |||||| || | |||||| ||||| |||| | ||    
T  27621297 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctacttggaataagtttcatggaaagatgtaaaaataattctcat 27621198  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  27621197 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 27621134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 409 - 466
Target Start/End: Complemental strand, 28738809 - 28738752
Alignment:
Q  409 acaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||||| |||||  ||||||||||||| |||||||||||| ||||||||| |||||    
T  28738809 acaaaaaaatagattatggattctaccaacaagtgggtcccaccattattaactattt 28738752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 31133133 - 31133186
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  |||| |||||| |||||||||||||||||||||||    
T  31133133 ttatggagaaaataaaaaggagaaaaaattgaatgcaatttgcatttaatttta 31133186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 607
Target Start/End: Complemental strand, 34900090 - 34899985
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttatt 601  Q
    |||| ||||||||||||||||||||||| ||||||    ||| |||| ||||||   ||| ||| ||||||||||||| |||  ||||| |||||| |||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgttcctcttagaataagttttataggaggatttaaaaataattttgatt 34899991  T
Q  602 ggttat 607  Q
    ||||||    
T  34899990 ggttat 34899985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 18689566 - 18689495
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaatta 463  Q
    |||||| |||||||||| | | |||| |||||||||||| |||||| ||||||||| ||||||| ||||||||    
T  18689566 atttggagagagataaacatataaaa-tagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 538
Target Start/End: Complemental strand, 11158721 - 11158690
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttgga 538  Q
    ||||||||||||||||||||||||||||||||    
T  11158721 ttattaagaaaactaaaacataagaatttgga 11158690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 543
Target Start/End: Complemental strand, 7499881 - 7499839
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggata 543  Q
    |||||||||||||||||||||||||||| |||||| ||| |||    
T  7499881 tcacatttattaagaaaactaaaacataggaatttagagtata 7499839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 535
Target Start/End: Original strand, 33563501 - 33563535
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaattt 535  Q
    |||||||||||||||||| ||||||||||||||||    
T  33563501 tcacatttattaagaaaattaaaacataagaattt 33563535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 560 - 657
Target Start/End: Complemental strand, 39187341 - 39187237
Alignment:
Q  560 ttggaaaaagttttataggaagatgaaaaaacaatttttattggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaa 652  Q
    |||||| ||||||||| | |||||| ||||| |||||| ||||||||       |||||||||| |||  ||||  ||||| ||||||||||||||||||    
T  39187341 ttggaataagttttatggaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaa 39187242  T
Q  653 tttta 657  Q
    |||||    
T  39187241 tttta 39187237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 3100010 - 3099957
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  3100010 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 3099957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 651
Target Start/End: Complemental strand, 7670802 - 7670749
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcattta 651  Q
    |||| ||||||||||||||| || |||||||||||| |||| ||||| ||||||    
T  7670802 tattagttatggagaaaatggaatagagagaaaattgaatgtaattttcattta 7670749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 657
Target Start/End: Original strand, 17749689 - 17749722
Alignment:
Q  624 agagaaaattaaatgcaatttgcatttaatttta 657  Q
    |||| |||||||||||||||||||||||||||||    
T  17749689 agagcaaattaaatgcaatttgcatttaatttta 17749722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 27752643 - 27752590
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  27752643 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 27752590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 37598127 - 37598074
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  37598127 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 37598074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 44052678 - 44052625
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  44052678 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 44052625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 44358595 - 44358648
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  44358595 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 44358648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 501 - 689
Target Start/End: Original strand, 44764 - 44959
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||  ||||||||||||||||||||| || |||||||||||||       
T  44764 tcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcat 44863  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
        ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  44864 tggctattggttatggaaaaaatgaaagagagggaaaattaaatgtaatttgcatttaattttacgagaataaacaaaagtttttcttgaaaaaga 44959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 58755 - 58684
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaatta 463  Q
    |||||| |||||||||| | | |||| |||||||||||| |||||| ||||||||| ||||||| ||||||||    
T  58755 atttggagagagataaacatataaaa-tagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 2e-57; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 15959633 - 15959820
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  15959633 tcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 15959732  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  15959733 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 15959820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 505 - 751
Target Start/End: Complemental strand, 46543146 - 46542895
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||  ||| |||||  ||||||||||||||||||||||||||            
T  46543146 atttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggc 46543047  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt-aaaaaagatgannnn 696  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||||        
T  46543046 tattggttgtggagaaaatgaaagagaga--aaattaaatgcaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaaaaatgatttt 46542949  T
Q  697 nnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgcgcttatatttt 751  Q
        |||||||| |||||||||||||||||| |||| |||||  |||||||||||    
T  46542948 ttttaaaaacaaaattaaataggagaaaagtttgtc-tttttttgcttatatttt 46542895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 2126206 - 2126028
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  2126206 tcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 2126107  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||| |||||||| |||||||    
T  2126106 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttaatgagaatgaacaaaa 2126028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 32623998 - 32624176
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  32623998 tcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 32624097  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32624098 tggccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 502 - 740
Target Start/End: Complemental strand, 6785622 - 6785379
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||  || |||||||||||||| ||||||| ||||||||||||        
T  6785622 cacacttattaagaaaactaaaacataagaatt-ggagtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgann 694  Q
       ||||||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||  |||||| ||      
T  6785523 ggctattggttatggaaaaaatgaaagagagagaaaattgaatgtagtttgcatttaattttatgagaataaacaaaagtttttcttggaaaaga-gatt 6785425  T
Q  695 nnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
          |||||||||||||||||||| |||||| | || |||||||    
T  6785424 ttttttaaaaacaagattaaataggataaaagtttatcttttttgc 6785379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 6787006 - 6786819
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||||||       
T  6787006 tcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcat 6786907  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| |||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||| |||||||    
T  6786906 tggctattggttatggaaaaaatgaaagagagtgaaaattgaatgtagtttgcatttaattttatgagaataaacaaaagtttttctt 6786819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 33369718 - 33369476
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||  ||||||||||||||||| | ||||| ||||||||||||       
T  33369718 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatg-agatgtaaaaacaattttcat 33369620  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        ||||||||||||| ||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||  |||||| ||     
T  33369619 tggctattggttatggaaaaaatgaa--agagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaaga-gat 33369523  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||||| |||||  |||| |||||||    
T  33369522 tttttttaaaaacaagattaaataggataaaagcttgtcttttttgc 33369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 45226306 - 45226119
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||  ||| ||||||||||||||||||| | ||||||||||||       
T  45226306 tcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 45226207  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  45226206 tgactattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 45226119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 39555579 - 39555757
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||| |||||||||||||||||||| |||| ||| ||||||||  ||| |||||||||||||| |||||| ||||||||||||       
T  39555579 tcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcat 39555678  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  39555679 tggctattggttatggaaaaaatgaaagagagagaacattgaatgtaatttgcatttaattttatgagaataaacaaaa 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 24190637 - 24190466
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||| | ||||| ||||||||||||       
T  24190637 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcat 24190538  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  24190537 tggctattggttatggaaaaaatgaaagaaagagaaaatt-aatgtaatttgcatttaattttatgagaataa 24190466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 512 - 691
Target Start/End: Original strand, 39932576 - 39932762
Alignment:
Q  512 aagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttat---- 607  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||  ||  || |||||||||| ||||||  |||||||||||||||||| |||        
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggt 39932675  T
Q  608 ---ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
       ||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  39932676 catggagaaaataaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaagtttttcttgaaaaagatg 39932762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 501 - 738
Target Start/End: Complemental strand, 33431727 - 33431485
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||| | |||||||||||| || |||||||| ||||||||  ||  |||||||||||||||| |||| ||||||||||||       
T  33431727 tcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcat 33431628  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        |||||||||| ||||||||||||||||||  |||||||||| |||||| |||| |||||||||||||||||||||| |||||||  |||||||||     
T  33431627 tggctattggttatagagaaaatgaaagagaga--aaattaaatgtaatttgtatttcattttatgagaataaacaaaagtttttcttggaaaagatgat 33431530  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcattttt 738  Q
           |||||||||||||||| |||||||| | |||| |||||    
T  33431529 tttttttaaaaacaagattaaatgggagaaaattttgtctttttt 33431485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 509 - 672
Target Start/End: Original strand, 12448969 - 12449138
Alignment:
Q  509 attaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattg------ 602  Q
    |||||||||| ||||| |||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||| |||||||||||| ||||          
T  12448969 attaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccatt 12449067  T
Q  603 -gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
     |||||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  12449068 ggttatggaaaaaatcaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12449138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 501 - 673
Target Start/End: Original strand, 3875012 - 3875193
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| ||| |||||||||||||||    
T  3875012 tcacacttattaagaaaagtaaaacataagaatttgaagtatagttttgtgtttttt--tttgaaaaagttttataggaatatgtaaaaacaatttttat 3875109  T
Q  601 t-----------ggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaag 673  Q
    |           ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3875110 tggctatatattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataaacaaaag 3875193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 32983165 - 32983341
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||| |||| | || |||||||| ||||||||  |||||||| |||||||| ||||||| |||||||||||| ||    
T  32983165 tcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttggaaaa-gttttataagaagatgtaaaaacaattttcat 32983263  T
Q  601 tg------gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||      |||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  32983264 tggcattggttatggaaaaaatgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaa 32983341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 507 - 672
Target Start/End: Original strand, 42965815 - 42965985
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||||||||||||||||||| |||||| ||  ||||||| ||||||||  ||||||||| ||||||||||||||| ||||||||||||       ||    
T  42965815 ttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggcta 42965913  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  42965914 ttggttatgga-aaaatgaaagagagagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 42965985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 502 - 690
Target Start/End: Original strand, 47014487 - 47014679
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    |||| ||| |||| |||||||||||||||||| |||||  ||||||| ||||||||  ||| ||||||||||||||||| ||| ||||||||||||        
T  47014487 cacacttactaagtaaactaaaacataagaatctggag--tagttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcatt 47014584  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagat 690  Q
       ||||||||||||| |||||||||||||||||||||| |||| | ||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  47014585 gactattggttatggaaaaaatgaaagagagagaaaattgaatgta-tttacatttaattttatgagaataaacaaaagtttttcttgaaaaagat 47014679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 501 - 740
Target Start/End: Original strand, 28016739 - 28016982
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||||||  |||||||  ||| |||| |||||||||||||||| ||||||||||||       
T  28016739 tcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcat 28016838  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        ||||||||||  | |||||  || |||||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||  |||||| ||     
T  28016839 tggctattggttataaaaaaaat--aaaagagagaaaattgaatgtaacttgcatttaattttatgagaataaacaaaagtttttcttggaaaaga-gat 28016935  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||||| |||||| |||| |||||||    
T  28016936 ttttttaaaaaacaagattaaataggataaaagtttgtcttttttgc 28016982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 35691560 - 35691388
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||  ||| ||||||||||||||| ||||| ||||||||||||||     
T  35691560 tcacatttattaagaaa-ctaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttat 35691462  T
Q  600 ------ttggttatgg-agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
          |||||||||| | ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  35691461 tggctattggttatggaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 507 - 740
Target Start/End: Original strand, 7467961 - 7468191
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggagga-tagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtt 605  Q
    |||||||||||||||||||||||||||||| || | || |||| ||||||||  ||||||||||||||| ||||||||| ||| |||||||| ||||| |    
T  7467961 ttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattggct 7468060  T
Q  606 atggag-------aaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnnn 698  Q
    || ||        ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||             
T  7468061 attgattaagagaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagttttgcttgaaaaaga--------- 7468151  T
Q  699 nnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
      |||||||||||||||||||| |||||| |||| |||||||    
T  7468152 --aaaaacaagattaaataggataaaagtttgtcttttttgc 7468191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 692
Target Start/End: Original strand, 24728619 - 24728818
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta 599  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||| | |||||||  || ||| |||||| || |||||||| |||||||||||| |    
T  24728619 tcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttca 24728718  T
Q  600 ttgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    ||||       ||||||| ||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||  ||||| |||| || ||||||||||    
T  24728719 ttggcaattgattatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcacgagaataagaaaaagtttttattgaaaaagatga 24728818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 673
Target Start/End: Original strand, 28120748 - 28120927
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||| | |||||||| ||||| |||||||| ||||||||  ||  ||  | |||||| |||||||| |||||||||||| ||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcat 28120847  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaag 673  Q
    |||       ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  28120848 tggctattgattatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgtgaataaacaaaag 28120927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 507 - 671
Target Start/End: Complemental strand, 1820577 - 1820406
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt--tta---- 599  Q
    ||||||||||||||||||||||||||||||||  |||||||| | ||| |||  ||||||||||||||||||||||||| ||||| |  ||  |||        
T  1820577 ttattaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttataggaagatgtaaaaaaatattcattagctt 1820478  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaa 671  Q
    ||||||||| | ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  1820477 ttggttatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaa 1820406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 501 - 671
Target Start/End: Complemental strand, 40718846 - 40718669
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||| ||||||||||| |||| ||||||||| |||||||| ||||||||  ||| ||||||||||||| |||| || | ||||||||||       
T  40718846 tcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcat 40718747  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaa 671  Q
        ||||||| || || ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40718746 tggctattggtaatagaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaa 40718669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 3076463 - 3076291
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||| |||| |||||||||||| || |||||||| ||||||||  |||||| ||||||||| |||||||| ||||| ||||||       
T  3076463 tcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcat 3076364  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
         |||||||||||| ||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  3076363 tggcaattggttatggaaaaaataaaagtgagagaaaattaaatgtaatttgcatttaatttcatgagaataa 3076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 43667296 - 43667472
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    |||||||||||||||||| ||| ||||||||||||  || ||| |||| ||||||||  ||| ||||||||||||||||||| | ||||||||||||       
T  43667296 tcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 43667395  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         |||||||||||| ||||||||  |||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  43667396 tggccattggttatggaaaaaatgaa--agagagaaaattgaatgtaatttacatttaattttatgagaataaacaaaa 43667472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 501 - 682
Target Start/End: Original strand, 13136547 - 13136731
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||| |||||||| |||  |||||   ||||||||||||| |||||||||||        
T  13136547 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgtttt-ctttaaaaaaaaattataggaagatgtaaaaacaatttccat 13136645  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctta 682  Q
        ||||||||||||| ||||||||  |||||||||||| |||  ||||||||||||||||||| |||||||||||||| ||||||||    
T  13136646 tggctattggttatggaaaaaatgaa--agagagaaaattgaatataatttgcatttaattttat-agaataaacaaaagtttttctta 13136731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 520 - 690
Target Start/End: Original strand, 37735395 - 37735572
Alignment:
Q  520 taaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggaga 612  Q
    |||||||||||||| || || |||||||| ||| ||||  |||||| |||||| || |||||| | ||||||||||||||||||       |||||||||    
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatggaga 37735494  T
Q  613 aaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagat 690  Q
    ||||| || |||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||| | ||||||||    
T  37735495 aaatggaaaagagagaaaattgaatgtaatttgcatttaatttcatgtgaataaacaaaagcttttcatgaaaaagat 37735572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 11241195 - 11240968
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||| |||| |||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| |||| ||||||| ||    
T  11241195 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcat 11241096  T
Q  601 tggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttct-taaaaaagatgannnnnnn 699  Q
    ||| |||   |   |||       || |||||| |||| ||||| |||||||||||||||||||||||||||| ||||||  |||||||||             
T  11241095 tggctat--tggttatg-------gaaaaaattgaatgtaatttacatttaattttatgagaataaacaaaagtttttctagaaaaaagat----tttct 11241009  T
Q  700 naaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
     |||||||||||||||||||| ||||||||||| |||||||    
T  11241008 aaaaaacaagattaaataggataaaagtgtgtcctttttgc 11240968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 502 - 681
Target Start/End: Original strand, 47600030 - 47600219
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttg-cttggaaaaa--gttttataggaagatgaaaaaacaattttt 598  Q
    |||||||||||| |||| |||||||||||||||| ||| |||||||| | ||| |   |||  |||||  |||||||||||||||| ||||||||||||     
T  47600030 cacatttattaaaaaaattaaaacataagaatttagagtatagttttttttgtgtaatcttaaaaaaaaagttttataggaagatgtaaaaacaattttc 47600129  T
Q  599 attgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||||       ||||| | ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  47600130 attggctattgtttatgaaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 47600219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 656
Target Start/End: Original strand, 8889730 - 8889845
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgca 640  Q
    |||||||  |||||| | |||| || |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  8889730 atagtttattgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggttattgagaaaatgaaagagagagaaaattgaatgca 8889829  T
Q  641 atttgcatttaatttt 656  Q
     ||| |||||||||||    
T  8889830 ctttacatttaatttt 8889845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 501 - 740
Target Start/End: Original strand, 44148829 - 44149070
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||| |||||||||| |||||||||||| || |||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||       
T  44148829 tcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 44148928  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
         |||||||||||| |||||     ||||||||||||||| | |||||||||||||||| ||||||||||  |||||||| | ||  |||||||||     
T  44148929 tggcaattggttatggaaaaaat----aagagagaaaattaaacgtaatttgcatttaatttcatgagaataagaaaaagcttctattggaaaagatga- 44149023  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||| | |||||| |||| |||||||    
T  44149024 tttttttaaaaacaagattaaatagaataaaagtttgtcttttttgc 44149070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 507 - 672
Target Start/End: Original strand, 46818501 - 46818673
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattg---- 602  Q
    ||||||||||||  |||||||||||||||  || |||||||| ||| ||||  ||| ||||||||||||||||||||  |||||||||||| ||||        
T  46818501 ttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 46818600  T
Q  603 ---gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
       ||||||||||||||||||  ||||||||| | || | |||||| ||||||||||||||||||||| ||||    
T  46818601 atagttatggagaaaatgaaattgagagaaaactgaacgtaatttgtatttaattttatgagaataaataaaa 46818673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 564 - 672
Target Start/End: Complemental strand, 16854245 - 16854131
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||| ||||| || ||||||||||||||||||       ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  16854245 aaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaatttt 16854146  T
Q  657 atgagaataaacaaaa 672  Q
    ||||||| ||||||||    
T  16854145 atgagaa-aaacaaaa 16854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 520 - 671
Target Start/End: Original strand, 2246026 - 2246184
Alignment:
Q  520 taaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttat-------ggaga 612  Q
    |||||||| | ||||| ||| |||||||| ||||||||  ||| || |||||||||||||| ||| ||||| |||||| ||||| |||       || ||    
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctattcgttgtgggga 2246125  T
Q  613 aaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaa 671  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2246126 aagtggaagagagagaaaattaaatgtaatttgcatttaattttatgagaataaacaaa 2246184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 1035023 - 1034839
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    |||||||||||||||||| |||||||||||||||||| | || ||||  ||||||||  |||||| |||||||||  ||||||  ||||||||||||       
T  1035023 tcacatttattaagaaaattaaaacataagaatttggcgtattgttt--tgtgttttctttggaataagttttatgagaagatataaaaacaattttcat 1034926  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        |||||||||  ||||||||  | |||| | |||||| |||| |||| ||||||||||| ||||||||||||||||| |||||||    
T  1034925 cgactattggttacagagaaaatagatgaga-aaaaaattgaatgtaattcgcatttaatttcatgagaataaacaaaagtttttctt 1034839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 52985101 - 52984999
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||  |||||| |||||| |  |||||||| |||||||||||| ||    
T  52985101 tcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcat 52985002  T
Q  601 tgg 603  Q
    |||    
T  52985001 tgg 52984999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 23392263 - 23392351
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||||||||||||||||||| |||| |||||||||||| || |||||||||||||||| ||||||||||||||||| |||| || |||||    
T  23392263 tattggttatggagaaaatggaagaaagagaaaattaa-tgtaatttgcatttaatttcatgagaataaacaaaagttttttttgaaaaa 23392351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 612 - 717
Target Start/End: Complemental strand, 50665313 - 50665208
Alignment:
Q  612 aaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnnnnnaaaaacaagat 711  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||| |||| ||  |||||||||        |||||||||||    
T  50665313 aaaatgaaagagagagaaaattaaatgtaatttgcaattaatttcatgagaataagcaaaagtttttattggaaaagatgatttcttttaaaaacaagat 50665214  T
Q  712 taaata 717  Q
    ||||||    
T  50665213 taaata 50665208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 45840059 - 45840220
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||| | |||| |  |||||||| |||||| |  ||| || | |||||||||||||||| |||||||||||| ||    
T  45840059 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttataggaagatg-aaaaacaattttcat 45840157  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| || ||||||||| |||||| ||||| |||||| |||||||||||||||    
T  45840158 tggtagttgattatagaaaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 45840220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 598 - 681
Target Start/End: Complemental strand, 50012655 - 50012572
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||| ||||| || ||||| ||||||| |||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||    
T  50012655 tattagttatagaaaaaataaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 50012572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 604
Target Start/End: Complemental strand, 50176690 - 50176587
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||||||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| || || ||||||||||||||| |||||||||||||||    
T  50176690 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaatttttat 50176591  T
Q  601 tggt 604  Q
    ||||    
T  50176590 tggt 50176587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 512 - 672
Target Start/End: Original strand, 3861699 - 3861864
Alignment:
Q  512 aagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggt 604  Q
    |||||||||||||||||| |||||| || ||| |||| | ||||||  || ||| ||||||||| | |||||| ||||||||||||       ||||| |    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgat 3861798  T
Q  605 tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||| | |||||||||| |||| ||||||||||  ||||||||||||||||||| |||||||| ||||    
T  3861799 tatgaaaaaaatgaaag-gaga-aaaattaaatataatttgcatttaattttataagaataaaaaaaa 3861864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 5950610 - 5950445
Alignment:
Q  501 tcacatttattaagaaaactaaaacataag---aatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt 597  Q
    ||||| ||||||||||||||||||||||     | |||| |  |||||||  |||||| | |||| || |||||||||||||||||| ||||||||||||    
T  5950610 tcacacttattaagaaaactaaaacatactcgtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaatttt 5950511  T
Q  598 tattggt-------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
     ||||||       ||| || |||||||||||||||| |||||||||||| ||| |||||||||||    
T  5950510 cattggtcattggttattgaaaaaatgaaagagagagcaaattaaatgcactttacatttaatttt 5950445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 656
Target Start/End: Original strand, 5858404 - 5858526
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaatt 633  Q
    |||||||  |||||| | |||| || |||||||||||||||||  ||||||||||||       |||||||||| |||||||||||| |||||| |||||    
T  5858404 atagtttcttgtgttatccttgaaataagttttataggaagatataaaaacaattttcattggctattggttattgagaaaatgaaacagagagcaaatt 5858503  T
Q  634 aaatgcaatttgcatttaatttt 656  Q
     |||||| |||||||||||||||    
T  5858504 gaatgcactttgcatttaatttt 5858526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 665
Target Start/End: Original strand, 10558798 - 10558920
Alignment:
Q  550 tgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaat 642  Q
    ||||||||  |||||| || |||||| |||||||| |||||||||||| |||||       |||||||||||||| |||||||| |||||| |||| |||    
T  10558798 tgtgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatggagaaaatggaagagagaaaaaatttaatgtaat 10558897  T
Q  643 ttgcatttaattttatgagaata 665  Q
    || |||||||||| |||||||||    
T  10558898 ttacatttaatttcatgagaata 10558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 678
Target Start/End: Complemental strand, 50370066 - 50369942
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaatttttattggttatgg------agaaaatgaaagagagagaaaattaaatg----caatttgcatttaat 653  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||| |      | |||||||||||||||||||||| ||||     |||||| |||||||    
T  50370066 aaaaagttttataggaagatgtaaaaacaatttctattggctattggttatgaaaaaatgaaagagagagaaaattgaatgtaattaatttgtatttaat 50369967  T
Q  654 tttatgagaataaacaaaagctttt 678  Q
    |||||||||||||| ||||| ||||    
T  50369966 tttatgagaataaaaaaaagttttt 50369942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 678
Target Start/End: Original strand, 6787050 - 6787166
Alignment:
Q  568 agttttataggaagatgaaaaaacaatttttatt-------ggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatga 660  Q
    ||||||||||||||||| ||||| ||||||||||       ||||||||| |||||||||||||||| ||||| |||| | |||||||||| ||||| ||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatggaaaaaatgaaagagagag-aaattgaatgtagtttgcatttatttttacga 6787148  T
Q  661 gaataaacaaaagctttt 678  Q
    ||||||| ||||| ||||    
T  6787149 gaataaataaaagttttt 6787166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttata 576  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||| ||| ||||  ||| |||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 501 - 638
Target Start/End: Original strand, 32742195 - 32742339
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||| ||||||| ||||||||| ||||||||||| ||| |||||||| ||||||||  ||  |||||||||||||  || ||  |||||||||||        
T  32742195 tcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcat 32742294  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatg 638  Q
       | |||| ||||||| ||||||||||| |||||||||||||||    
T  32742295 taatcattgattatggaaaaaatgaaagaaagagaaaattaaatg 32742339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 657
Target Start/End: Original strand, 23873823 - 23873986
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||| || ||   |||||  | ||| |||| |||||| | ||||||| |||||| || | |||||| ||||| |||||| ||    
T  23873823 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 23873922  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| ||| |||||  |||||||||||||||||||||||||||||    
T  23873923 tggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcatttaatttta 23873986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 7397874 - 7397712
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||| |||||||||| |||  | |||| |  |||||||| |||||| |  ||| || || ||||||||||||||| |||||||||||| ||    
T  7397874 tcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttcat 7397775  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| |||||||||||| | |||| ||||| |||||| |||||||||||||||    
T  7397774 tggtatttgattatagagaaaatgaaaaaaagagcaaattgaatgcactttgcatttaatttt 7397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 37538977 - 37538815
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| ||||| |||  | |||| |  |||||||  |||||| | |||| || |||||||||||||||||| ||| |||||||| ||    
T  37538977 tcacacttattaagaaaattaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttcat 37538878  T
Q  601 tggtt-------atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||       || ||||||||||||||| ||| ||||| |||||| |||||| ||||||||    
T  37538877 tggttgttggttatcgagaaaatgaaagagggagcaaattgaatgcactttgcagttaatttt 37538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 509 - 603
Target Start/End: Complemental strand, 30221885 - 30221791
Alignment:
Q  509 attaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg 603  Q
    |||||||||| ||||||||||||| |||||  ||| |||| ||||||||  ||  || ||||||||| |||||||| ||||||| ||||||||||    
T  30221885 attaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacattttttattgg 30221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 42724159 - 42724101
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||| |||||| ||||||||| || ||||| |||||||||||||||||||||||||||    
T  42724159 ttatttgttatgaagaaaatgatagggagagcaaattaaatgcaatttgcatttaattt 42724101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 650
Target Start/End: Original strand, 7876039 - 7876091
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcattt 650  Q
    ||||||||||||| ||||| |||||||||||||||| |||| |||||||||||    
T  7876039 tattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcattt 7876091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 672
Target Start/End: Complemental strand, 25391718 - 25391674
Alignment:
Q  628 aaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||| |||| |||||||||||||||||||||||||||||||||    
T  25391718 aaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 25391674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 672
Target Start/End: Original strand, 47302903 - 47303077
Alignment:
Q  503 acatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt----- 597  Q
    |||||| ||||||||||||||| ||||||| |||||| ||| |||  ||||||||  | |||| |||||| |||||||||||  |||| ||||||         
T  47302903 acatttgttaagaaaactaaaatataagaaattggagtataattt--tgtgtttttttaggaataagtttcataggaagatg-taaaataattttcattg 47302999  T
Q  598 --tattggttatggagaaaatg-aaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
      ||||| ||||| |||||||| ||| | | |||||| | |||| |||||||||||||||| |||||||||| |||||    
T  47303000 gctattgattatgtagaaaatgaaaaaaaatagaaaactgaatgtaatttgcatttaatttcatgagaataagcaaaa 47303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 7190721 - 7190663
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||| ||||| |||||||||| || ||||| |||||||| ||||||||||||||||||    
T  7190721 ttatttgttatagagaaaatgagagggagagcaaattaaaggcaatttgcatttaattt 7190663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 16242220 - 16242286
Alignment:
Q  352 aagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagt 418  Q
    |||||| |||||||||||||||| | |||  | ||||| ||||||||||||||| ||||||||||||    
T  16242220 aagatcgtcttcatttgcttaaaatcaatggacaatgtcatttggtgagagatagatacaaaaaagt 16242286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 656
Target Start/End: Complemental strand, 16688238 - 16688142
Alignment:
Q  567 aagttttataggaagatgaaaaaacaattt-------ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||       || |||||||| |||||||||||||| | || | |||||||| | |||||||||||||||    
T  16688238 aagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagaaaaagcatattaaatgaactttgcatttaatttt 16688142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 666
Target Start/End: Complemental strand, 43765418 - 43765290
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------ttattggttatggagaaaatgaaagagagagaaaattaaat 637  Q
    |||| ||||||||  || ||| |||||||||||||||||| ||||||| |||       ||||| |||||| |||||||| |||||| |||||||| |||    
T  43765418 ttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatgcagaaaatggaagagaaagaaaattgaat 43765319  T
Q  638 gcaatttgcatttaattttatgagaataa 666  Q
      ||||||||| ||||||  |||||||||    
T  43765318 ttaatttgcatctaatttcgtgagaataa 43765290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 607
Target Start/End: Original strand, 52841438 - 52841544
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||||||| || | |||| || |||||||  ||| || | |||  || |||||| |||| ||||||  ||||||||||| ||    
T  52841438 tcacatttattaagaaaactaaaacacaatagtttgtagtatagtttcttgtcttatccttaaaataagtttcatagaaagatgttaaaacaattttcat 52841537  T
Q  601 tggttat 607  Q
    |||||||    
T  52841538 tggttat 52841544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 564 - 656
Target Start/End: Complemental strand, 13351785 - 13351686
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||||||||||||| |||||||||||| |||||       |||| ||||||||||||  ||||  ||||| |||||| |||||||||| ||||    
T  13351785 aaaaagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaggagaacaaattgaatgcactttgcatttagtttt 13351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 657
Target Start/End: Complemental strand, 25990912 - 25990749
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||| || ||   |||||  | ||| |||| |||||| | ||||||| |||||| || | || ||| ||||| |||||| ||    
T  25990912 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattttcat 25990813  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  25990812 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 25990749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 628
Target Start/End: Original strand, 32318553 - 32318687
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaa-aagttttataggaagatgaaaaaacaattt--- 596  Q
    ||||| ||||||| |||| ||||| |||| ||||||||| ||| |||| | | ||||| ||  ||| ||||||||| |||||||| |||||||||||       
T  32318553 tcacaattattaa-aaaattaaaatataaaaatttggagtataattttttcttttttgtttttaaataagttttattggaagatgtaaaaacaattttca 32318651  T
Q  597 ----ttattggttatggagaaaatgaaagagagaga 628  Q
        |||||||||||||||||||||| |||||||||    
T  32318652 ttggttattggttatggagaaaatgagagagagaga 32318687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 41063910 - 41063747
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaag-ttttataggaagatgaaaaaacaattttta 599  Q
    ||||| ||||||||||||| ||||||||  | |||| |  |||||||| |||||| | |||  || ||| |||||||| |||||| ||||| |||||| |    
T  41063910 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttattcttaaaataagcttttatagaaagatgtaaaaataattttca 41063811  T
Q  600 ttggttatg-------gagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||        |||||||| |||||||||  ||||| |||||| |||||||||||||||    
T  41063810 ttggttatttgttattgagaaaatcaaagagagaacaaattgaatgcactttgcatttaatttt 41063747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 607
Target Start/End: Original strand, 35366202 - 35366302
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta 606  Q
    ||||||||||||||||||||||  | |||| |  |||||||  |||||| |  ||| || || |||||||| |||||| |||||||||||| ||||||||    
T  35366202 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattggtta 35366301  T
Q  607 t 607  Q
    |    
T  35366302 t 35366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 644
Target Start/End: Original strand, 298665 - 298812
Alignment:
Q  505 atttattaagaaaactaaaacataaga--atttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattg 602  Q
    ||||||||||||||||||||||||| |  | ||| || |||||||  ||||||||  || ||| |||||| || |||||||| |||||  ||||| ||||    
T  298665 atttattaagaaaactaaaacataaaataacttgaagtatagtttgatgtgttttctttagaataagttt-atgggaagatgtaaaaattattttaattg 298763  T
Q  603 g-------ttatggagaaaatgaaagagagagaaaattaaatgcaattt 644  Q
    |       |||||||||||||| |||| ||||||||||||||| |||||    
T  298764 gctattgattatggagaaaatggaagaaagagaaaattaaatgtaattt 298812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 2459881 - 2460020
Alignment:
Q  516 aaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatggagaaaa 615  Q
    |||||||| ||||| ||||||||  |||| | | |||||| | ||||||| |||||| |  |||||||| ||||||| |   |||||  |||| ||||||    
T  2459881 aaactaaagcataataatttggaacatagctatttgtgttctccttggaataagtttcaggggaagatgtaaaaacattagctattgactatgaagaaaa 2459980  T
Q  616 tgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||  || ||||| ||||| || ||||||||||||||||||    
T  2459981 tgggagggagagcaaattgaaagcaatttgcatttaattt 2460020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 18976304 - 18976379
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||| |||||||| | |||||| | ||||| |||||| | |||| ||||| ||||||||||| |||||||||||    
T  18976304 atttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggtcccatcatcattaattattt 18976379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 656
Target Start/End: Original strand, 34102069 - 34102127
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||| |||||| |||||||||||| |||||  ||||| |||||||||||||||    
T  34102069 ttattggttattgagaaagtgaaagagagagcaaatt-gatgcactttgcatttaatttt 34102127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 598
Target Start/End: Original strand, 46803670 - 46803761
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttt 598  Q
    ||||||||||||| ||||||||  | |||| |  |||||||| |||||| | |||| || |||||| |||| |||||| |||||||||||||    
T  46803670 ttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttatccttgcaataagtttcatagaaagatgtaaaaacaattttt 46803761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 346 - 419
Target Start/End: Complemental strand, 8711081 - 8711007
Alignment:
Q  346 tgagtaaagatcatcttcatttgcttaaac-taaataaagaatgttatttggtgagagataaatacaaaaaagta 419  Q
    ||||| |||||| ||| ||||||||||||  |||||  | ||||| ||||||||||||||| |||||||||||||    
T  8711081 tgagtcaagatcctctccatttgcttaaaaataaatggataatgtcatttggtgagagatagatacaaaaaagta 8711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 7845044 - 7844983
Alignment:
Q  411 aaaaaagtagatagtggattctaccaataagtgggtcccatcattattaatta-tttatact 471  Q
    |||||| |||||| ||||| |||||| |||||| |||||| |||||||||||| ||||||||    
T  7845044 aaaaaaatagatattggatcctaccactaagtgtgtcccaccattattaattagtttatact 7844983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 26907195 - 26907248
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  26907195 ttatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaatttta 26907248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 30221760 - 30221711
Alignment:
Q  643 ttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    |||||||||||||||| ||||||| ||| || ||||||| ||||||||||    
T  30221760 ttgcatttaattttataagaataagcaacagtttttcttgaaaaagatga 30221711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 31970415 - 31970468
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  31970415 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 31970468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 35941895 - 35941842
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  ||||| ||||||||||| |||||||||||    
T  35941895 ttatggagaaaataaaaaagagaacaaattgaatgcaatttgtatttaatttta 35941842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 39026352 - 39026405
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  39026352 ttatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaatttta 39026405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 40220110 - 40220057
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  40220110 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 40220057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 40935719 - 40935772
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  40935719 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 40935772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 40960580 - 40960633
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  40960580 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 40960633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 656
Target Start/End: Complemental strand, 43359741 - 43359696
Alignment:
Q  611 gaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||||||||| ||||| |||| | |||||||||||||||    
T  43359741 gaaaatgaaagagagagcaaattgaatgtactttgcatttaatttt 43359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 656
Target Start/End: Original strand, 44510317 - 44510374
Alignment:
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||| |||| ||||||||||||  ||||| ||||| |||||| |||||||||||||||    
T  44510317 attgattatagagaaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 44510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 44875233 - 44875180
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  44875233 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 44875180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 52323604 - 52323685
Alignment:
Q  385 aatgttatttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    ||||||||||||||||||||| |||||| ||||||  |||| ||| |||| | ||||||| || || |  ||||||||||||    
T  52323604 aatgttatttggtgagagatacatacaacaaagtatgtagtagatcctactattaagtggatctcaccgctattaattattt 52323685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 5e-55; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 20644182 - 20643995
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  20644182 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20644083  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||    
T  20644082 tggctattggttatggaaaaaatgaaagagagggaaaattgaatgtaatttgcatttaatttcatgagaataaacaaaagtttttctt 20643995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 42273815 - 42273639
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||| ||||||| ||||||||||||       
T  42273815 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 42273716  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42273715 tggctattggttatggagaaaatgaa--agagagaaaattgaatgcaatttgcatttaattttatgagaataaacaaaa 42273639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 6686553 - 6686380
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttgg-aaaaagttttataggaagatgaaaaaacaatttt-- 597  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||| ||||||||||||||||||||| ||||||||||||      
T  6686553 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttca 6686454  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
         ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  6686453 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 6686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 37562754 - 37562933
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtg-ttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||  ||||||||||||||||||||||||| ||||||||||||      
T  37562754 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttca 37562853  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         ||||| ||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  37562854 ttagctattgtttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 37562933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 43589955 - 43590127
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  || |||||||||||||||| ||||| ||||||||||||       
T  43589955 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcat 43590054  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  43590055 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 43590127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 20039270 - 20039083
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||| |||| |||||||||||||||| |||| |||||||||     
T  20039270 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttat 20039171  T
Q  600 ------ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
          ||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  20039170 tggctattggttatgaaaaaaatgaaagagatagaaaattaaatgtaatttgcatttaattttatgagaattaacaaaagtttttctt 20039083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 502 - 689
Target Start/End: Complemental strand, 34425497 - 34425304
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    |||| |||||||||||||||||||||||||||||| || |||||||| ||||||||  ||| ||||||||||||||||| ||| ||||||||||||        
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
       ||||| ||||||| ||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  34425397 ggctattgattatgga-aaaataaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaagtttttcttgaaaaaga 34425304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 11261877 - 11262055
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||| ||||||| |||| ||||||||||| ||| |||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  11261877 tcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11261976  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  11261977 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 11262055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 37522592 - 37522761
Alignment:
Q  511 taagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattgg 603  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       |||||     
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgt 37522691  T
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaa-ttttatgagaataaacaaaa 672  Q
    ||||||| ||||||||||| |||||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  37522692 ttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaatttttatgagaatagacaaaa 37522761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 25841032 - 25840786
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||| ||||| |||||| || |||||||| ||||||||  |||||| |||||| || |||||||| |||||||||||| ||    
T  25841032 tcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25840933  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
    ||        ||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||| |||| ||  |||||||||     
T  25840932 tgacaattgtttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattggaaaagatgat 25840833  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||| | |||||| ||||||||||||    
T  25840832 ttttttaaaaaacaagattaaatagaataaaagtttgtcatttttgc 25840786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 508 - 689
Target Start/End: Original strand, 38130113 - 38130304
Alignment:
Q  508 tattaagaaaactaaaacataagaatttggaggatagt---tttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    |||||||||||||||||||||||||||||||  |||||   ||| ||||||||  || |||||||||||||||||| ||| ||||| ||||||           
T  38130113 tattaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggc 38130212  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaaga 689  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||| |||||||| ||||||    
T  38130213 tattggttatggaaaaaatgaaagagagagaaaattgaatgtaatctacatttaattttatgagaataaacaaaagtttttcttagaaaaga 38130304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 527 - 672
Target Start/End: Complemental strand, 32111144 - 32110992
Alignment:
Q  527 taagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaa 619  Q
    ||||||||||||| ||| | || ||||||||  ||| ||||||||| ||||||||||| ||||||||||||       ||||||||||||| || |||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatggaaaatatgaa 32111045  T
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32111044 agagagagaaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 32110992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 507 - 690
Target Start/End: Original strand, 43454322 - 43454512
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    |||||||||||| ||||||||||||| ||| |  |||||||| ||||||||  |||  | |||||||||||||| ||| ||||||||||||       ||    
T  43454322 ttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcatttacta 43454421  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagat 690  Q
    ||||||| | ||||||| |||||||||||||||| |||| ||||| ||||||||| ||||||| |||||||||| ||||||||||||||||    
T  43454422 ttggttaagaagaaaataaaagagagagaaaattgaatgtaatttacatttaattctatgagattaaacaaaagtttttcttaaaaaagat 43454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 505 - 665
Target Start/End: Complemental strand, 19413305 - 19413138
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    |||||||||||||||||||  ||||||||||| || |||||||| ||||||||  ||| || ||||||||| |||||||| ||||||||||||           
T  19413305 atttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggc 19413206  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaata 665  Q
     |||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||| |||||||||    
T  19413205 aattggttatggaaaaaataaaagagagggaaaattaaatgtaatttgcatttaatttcatgagaata 19413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 501 - 738
Target Start/End: Complemental strand, 4463526 - 4463284
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||| |||||||||||| || || ||| |  |||||||  |||||| ||| || || |||||||| ||||||||||||       
T  4463526 tcacacttattaagaaaactaaagcataagaatttgtagcatggttgt--gtgttttctttggaataagcttcatgggaagatgtaaaaacaattttcac 4463429  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||| |||||| |||| ||  |||||||||     
T  4463428 tggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgcaattaatttcatgagtataagcaaaagtttttattggaaaagatgat 4463329  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcattttt 738  Q
           |||||||||||||||||  | |||||| |||| |||||    
T  4463328 ttcttttaaaaacaagattaaatataataaaagtttgtctttttt 4463284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 564 - 687
Target Start/End: Complemental strand, 38280952 - 38280822
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaatttttattggttat-------ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||       ||| |||||||||||||||||||||| |||  |||||||||||||||||    
T  38280952 aaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatggaaaaaatgaaagagagagaaaattgaatataatttgcatttaatttt 38280853  T
Q  657 atgagaataaacaaaagcttttcttaaaaaa 687  Q
    ||||||||||||||||| ||||||| |||||    
T  38280852 atgagaataaacaaaagtttttcttgaaaaa 38280822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 523 - 740
Target Start/End: Complemental strand, 8225608 - 8225386
Alignment:
Q  523 aacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatg--aaaaaacaatttt------tattggttatggagaaa 614  Q
    |||| |||||||||||  |||||||| ||| ||||  ||||||||||||||||||||| |||  |||||| |||||       ||||||||||||| |||    
T  8225608 aacaaaagaatttggactatagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatggaaaaa 8225509  T
Q  615 atgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnnnnnaaaaacaagattaa 714  Q
    ||||||||||||  ||||| || | |||||||||||||||||||||||||||||||||| |||||||  |||||| ||        ||||||||||||||    
T  8225508 atgaaagagaga--aaattgaacgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaaga-gatttttttaaaaaacaagattaa 8225412  T
Q  715 ataggagaaaagtgtgtcatttttgc 740  Q
    ||| || |||||| |||| |||||||    
T  8225411 atatgataaaagtttgtcttttttgc 8225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 501 - 691
Target Start/End: Complemental strand, 17351556 - 17351358
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||| || ||| || |||||| |||||||| | | ||||  |||||| ||||||||| | |||||| |||||||||||| ||    
T  17351556 tcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattttaat 17351457  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt-cttaaaaaagatg 691  Q
    |||       ||||||||||||||| | |||||||||||| |||| ||||| |||||||||| |||||||||| | |||| |||| |||| ||||||||    
T  17351456 tggctattgattatggagaaaatgacatagagagaaaattgaatgtaattttcatttaatttcatgagaataagctaaagtttttccttagaaaagatg 17351358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 526 - 740
Target Start/End: Original strand, 5984126 - 5984357
Alignment:
Q  526 ataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--------------tattggttatggag 611  Q
    |||||||||| ||| |||||||| ||||||||  |||||| ||||||||||| || ||| ||||||||||||              |||||||||| |||    
T  5984126 ataagaatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttattggttatagag 5984225  T
Q  612 aaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga---nnnnnnnnaaaaacaa 708  Q
    |||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||| | |||||  |||||||||           ||||||||    
T  5984226 aaaatgaaagagagagaatatttaatgtaatttacatttaattttatgagaataaacaaaagttgttcttggaaaagatgacttttaaaaaaaaaaacaa 5984325  T
Q  709 gattaaataggagaaaagtgtgtcatttttgc 740  Q
    |||||||||||| |||||| |||| |||||||    
T  5984326 gattaaataggataaaagtttgtcttttttgc 5984357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 5355541 - 5355425
Alignment:
Q  350 taaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtccc 449  Q
    |||||||||||| |||||| |||||  ||||| | ||||||||||||||||||||| |||||||||||||  |||||||| |||||| |||||| ||| |    
T  5355541 taaagatcatctccatttgtttaaaagaaatagataatgttatttggtgagagatagatacaaaaaagtatgtagtggatcctaccattaagtgagtctc 5355442  T
Q  450 atcattattaattattt 466  Q
    ||||||| |||||||||    
T  5355441 atcattactaattattt 5355425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 39505225 - 39505397
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta 599  Q
    ||||| ||||||| |||| ||||  ||||||||||| || |||||||| | |||||||  |||||| ||||||||| | |||||| |||||||||||| |    
T  39505225 tcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttca 39505324  T
Q  600 ttgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    ||||       ||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  39505325 ttggcaattcgttatgga-aaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 39505397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 507 - 656
Target Start/End: Complemental strand, 8506593 - 8506443
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-tt 605  Q
    ||||||||||||||||||||||  | |||| |  |||||||  | |||| | |||| || ||||||||||| |||||| |||||||||||| ||||| ||    
T  8506593 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattgggtt 8506494  T
Q  606 atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    || |||||||||||||| |||| ||||| |||||| |||||||||||||||    
T  8506493 attgagaaaatgaaagatagagcaaattgaatgcactttgcatttaatttt 8506443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 507 - 656
Target Start/End: Original strand, 12912294 - 12912449
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------tta 599  Q
    |||||||||||||||||||||| | | |||||  |||||||| |||||| |  ||| || |||||||||||||||||| |||||||||||       |||    
T  12912294 ttattaagaaaactaaaacata-gtagttggaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtta 12912392  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||| | || |||||||||||||||| |||||||||||| |||||||||||||||    
T  12912393 ttggttgttgaaaaaatgaaagagagagcaaattaaatgcactttgcatttaatttt 12912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 563 - 672
Target Start/End: Complemental strand, 32017809 - 32017694
Alignment:
Q  563 gaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||| |||||||||||||||| ||||||||||||       ||||||||||||| |||| |||||||||||||| || |||| ||||||||||||||||    
T  32017809 gaaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatgga-aaaacgaaagagagagaaagttgaatgtaatttgcatttaattt 32017711  T
Q  656 tatgagaataaacaaaa 672  Q
    |||||||||||||||||    
T  32017710 tatgagaataaacaaaa 32017694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 656
Target Start/End: Original strand, 3463814 - 3463970
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggt 604  Q
    ||||||||||||||||||||||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||  |||||||||||||||||||    
T  3463814 atttattaagaaaactaaaacatac-agtttgtaacatagtttt-tgtgttatctttgaaataagttttataggaagatataaaaacaatttttattggt 3463911  T
Q  605 -------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
           ||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  3463912 agttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 3463970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 520 - 681
Target Start/End: Original strand, 42104262 - 42104428
Alignment:
Q  520 taaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggaga 612  Q
    |||||||||||||||||||| ||| ||||  ||||| |  |||||| |||||| || |||||||| |||||||||||| |||||       |||||||||    
T  42104262 taaaacataagaatttggagtataatttt--gtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctattaattatggaga 42104359  T
Q  613 aaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    ||||| ||||| || |||||| |||| | |||||||||||||| |||||  ||| |||||| |||||||    
T  42104360 aaatggaagagtgataaaattgaatgtattttgcatttaatttcatgagtttaagcaaaaggttttctt 42104428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 607
Target Start/End: Original strand, 30893243 - 30893349
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||| | ||||||||| |||||||  |||||||| ||| |||  | |||||| | |||||| ||||| |||||||||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttttcttagaattaattttatggaaagatgtaaaaataatttttat 30893342  T
Q  601 tggttat 607  Q
    |||||||    
T  30893343 tggttat 30893349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 510 - 579
Target Start/End: Complemental strand, 32019980 - 32019911
Alignment:
Q  510 ttaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttatagga 579  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  || ||||| || ||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttctttagaaaacgtcttatagga 32019911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 2884027 - 2883927
Alignment:
Q  344 tttgagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtg 443  Q
    |||||||||||||  |||| ||||||||||| |||||  ||||||| ||||||||| ||||| |||||||||| || ||| ||||| |||||| ||||||    
T  2884027 tttgagtaaagatactctttatttgcttaaaataaatggagaatgtcatttggtgaaagatatatacaaaaaattatataatggatcctaccactaagtg 2883928  T
Q  444 g 444  Q
    |    
T  2883927 g 2883927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 681
Target Start/End: Original strand, 9957516 - 9957596
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    ||||||||||| | |||||||||||||||  || || |||| |||||||||||||||||||||||||||||||||| |||||||    
T  9957516 tattggttatgaa-aaaatgaaagagaga--aagttgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 9957596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 620 - 672
Target Start/End: Original strand, 12730099 - 12730151
Alignment:
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  12730099 agagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12730151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 628
Target Start/End: Complemental strand, 23233579 - 23233445
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||| ||||| ||||||||||||||||||  | |||||||| ||||||||  ||| ||| |  |||||||||| ||| ||||||| ||||       
T  23233579 tcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagtttttat 23233480  T
Q  598 ----tattggttatggagaaaatgaaagagagaga 628  Q
        |||||||||||||||||||||||||||||||    
T  23233479 taactattggttatggagaaaatgaaagagagaga 23233445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 513 - 692
Target Start/End: Original strand, 41625517 - 41625701
Alignment:
Q  513 agaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggtt 605  Q
    |||||||||||||||||||||||  |  |||||||| ||||||||  ||| || |||||| ||||||||||| |||||  |||||       ||||| ||    
T  41625517 agaaaactaaaacataagaatttaaat-atagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgatt 41625615  T
Q  606 atggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    ||| | |||||| ||||||| |||||||||||| |||||| ||||||||| |||| |||||||| ||| |||| ||  |||||||||    
T  41625616 atgaa-aaaatggaagagagggaaaattaaatgtaatttgaatttaatttcatgaaaataaacataagtttttgttggaaaagatga 41625701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 620 - 687
Target Start/End: Original strand, 104341 - 104408
Alignment:
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||| ||||||| ||||||| |||||    
T  104341 agagagagaaaattgaatgtaatatgcatttaattttatgagaatagacaaaagtttttcttgaaaaa 104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 10153987 - 10154083
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggttatgg-------agaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||| ||||||||| |       ||||||||||||||| || ||||| |||||| |||||||||||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggtcattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt 10154083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 608 - 672
Target Start/End: Original strand, 445996 - 446060
Alignment:
Q  608 ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||| |||| |||||| ||||    
T  445996 ggagaaaatgaaagagagaaaaaattgaatgcaattttcatttaatttcatgataataaaaaaaa 446060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 16153353 - 16153500
Alignment:
Q  515 aaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttat 607  Q
    ||||||||||||||| | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||| |||||| ||||| |||||       ||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattggtagttgattat 16153451  T
Q  608 ggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
     |||||| ||||| |||||| |||||||||||| |||| ||||||||||    
T  16153452 agagaaagtgaaaaagagagcaaattaaatgcactttgtatttaatttt 16153500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 691
Target Start/End: Complemental strand, 1238590 - 1238497
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
    |||||||||| |||||||||   |||| |||||||| |||| ||||||  ||||||||||| |||||||  ||||| |||||||| ||||||||    
T  1238590 tattggttatagagaaaatgggggagaaagaaaattgaatgtaatttgtttttaattttataagaataagtaaaagtttttcttagaaaagatg 1238497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 678
Target Start/End: Complemental strand, 11858385 - 11858304
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
    |||||| |||||||||||||| || ||||| |||||| || | |||||| |||||| || ||||||||||||||||| ||||    
T  11858385 ttattgattatggagaaaatggaaaagagaaaaaattgaacgtaatttgtatttaagttcatgagaataaacaaaagttttt 11858304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 620 - 672
Target Start/End: Original strand, 12792919 - 12792972
Alignment:
Q  620 agagagaga-aaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  12792919 agagagagagaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12792972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 655
Target Start/End: Complemental strand, 32079666 - 32079512
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta 606  Q
    ||||||||||||||||||||| | ||||||||  |||||||| | |||| | |||| ||  ||||| || | |||||| |||||||||||| || | |||    
T  32079666 ttattaagaaaactaaaacattataatttggattatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcatcgatta 32079567  T
Q  607 tg-------gagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    |        |||||||||| || |||||||| ||||||||||||||||||||||||    
T  32079566 tttattacagagaaaatgagagggagagaaa-ttaaatgcaatttgcatttaattt 32079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 9957428 - 9957483
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgtttt 557  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  9957428 tcacacttattaagaaaactaaaacatgagaatttggagtatagtttt-tgtgtttt 9957483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 12792779 - 12792835
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgtttt 557  Q
    ||||| ||||||| |||||||||||||||||| |||||| |||||||| ||||||||    
T  12792779 tcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgtttt 12792835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 5369090 - 5369186
Alignment:
Q  567 aagttttataggaagatgaaaaaacaattt-------ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||       || |||||||| ||||||||||||||||| |   ||| |||||| |||||||||||||||    
T  5369090 aagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagagagggcttattgaatgcactttgcatttaatttt 5369186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 8146116 - 8146169
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  ||||| |||||||||||||||||||||||    
T  8146116 ttatggagaaaataaaaaagagaacaaattgaatgcaatttgcatttaatttta 8146169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 657
Target Start/End: Original strand, 31690657 - 31690776
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta-------tggagaaaatgaaagagagagaaaattaaat 637  Q
    |||| |||||| | |||||||  |||||||||| |||||| ||||| |||||| ||||||||       |||||||||| |||  ||||  ||||| |||    
T  31690657 ttttttgtgttcttcttggaatgagttttatagaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaat 31690756  T
Q  638 gcaatttgcatttaatttta 657  Q
    ||||||||||||||||||||    
T  31690757 gcaatttgcatttaatttta 31690776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 603 - 655
Target Start/End: Complemental strand, 8146782 - 8146730
Alignment:
Q  603 gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    |||||||||||||||| || ||||| ||||||| || ||||||||||||||||    
T  8146782 gttatggagaaaatgagagggagagcaaattaattgtaatttgcatttaattt 8146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 12729878 - 12729933
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgtttt 557  Q
    ||||| ||||||| |||||||||||||||||| |||||| |||||||| ||||||||    
T  12729878 tcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgtttt 12729933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 6391934 - 6391876
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    ||||| ||||| |||||||||||||||| || | | ||||||||||||||| |||||||    
T  6391934 ttattagttatagagaaaatgaaagagaaagtataataaatgcaatttgcaattaattt 6391876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 598 - 628
Target Start/End: Original strand, 12792873 - 12792903
Alignment:
Q  598 tattggttatggagaaaatgaaagagagaga 628  Q
    |||||||||||||||||||||||||||||||    
T  12792873 tattggttatggagaaaatgaaagagagaga 12792903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 8541667 - 8541720
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  8541667 ttatggagaaaataaaatggagaacaaatttaatgcaatttgcatttaatttta 8541720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 20914915 - 20914862
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  20914915 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 20914862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Complemental strand, 33639699 - 33639610
Alignment:
Q  347 gagtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtggattctacca 436  Q
    |||| |||||| ||||||||| || |||  |||| || ||||||||||||  |||||||||||| ||||||||  || ||||| ||||||    
T  33639699 gagttaagatcctcttcattttctaaaagcaaatgaataatgttatttggcaagagataaatacgaaaaagtatgtaatggatcctacca 33639610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 42365091 - 42365038
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  42365091 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 42365038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 5e-55; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 45660536 - 45660355
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaat---ttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt 597  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||    
T  45660536 tcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 45660437  T
Q  598 -------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
           ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  45660436 cattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 45660355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 19264268 - 19264080
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||| |||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  19264268 tcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 19264169  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaa-tttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||||||||| ||||| |||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||    
T  19264168 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaattttgcatttaattttatgagaataaacaaaagtttttctt 19264080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 45085425 - 45085247
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||| ||| ||||  ||| ||||||||||||||||||||| |||||||||||| ||    
T  45085425 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 45085326  T
Q  601 t-------ggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |       ||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  45085325 tagccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 45085247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 6110191 - 6110371
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||  | ||||||||||||||||||||||| ||||||||||||       
T  6110191 tcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcat 6110290  T
Q  598 ----tattggttatggagaaaatgaa--agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  6110291 tggctattggttatggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 6110371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 507 - 672
Target Start/End: Original strand, 28599146 - 28599318
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||| |||||||||||||| ||||| ||||||       ||    
T  28599146 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattggcta 28599245  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  28599246 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatgcatttaattttatgagaataaacaaaa 28599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 3201494 - 3201316
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||  || |||||||| ||||||||  |||||||||||||||||| |||||| ||||||||||||       
T  3201494 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 3201395  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| ||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  3201394 tggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 3201316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 35517291 - 35517119
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||  ||||| ||||| ||||||       
T  35517291 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcat 35517192  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  35517191 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35517119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 502 - 672
Target Start/End: Original strand, 33198624 - 33198801
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt---- 597  Q
    |||| |||||||||||||||||| |||||||||||||   ||||||| ||||||||  ||  || |||||||||||||||||| ||||||||||||        
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgatt 33198723  T
Q  598 ---tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
       |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  33198724 ggttattggttatggagaaaatgaaagagagagaaaattgaatgtaatttgcatttaattctatgagaataaacaaaa 33198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 25572213 - 25572036
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||| |||||||||||| || |||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||       
T  25572213 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25572114  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  25572113 tggatattggttatgga-aaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagcaaaa 25572036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 501 - 690
Target Start/End: Complemental strand, 12938410 - 12938214
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| |||| |||  ||| || ||||||||||||||  || ||||||||||||       
T  12938410 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcat 12938311  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagat 690  Q
        ||||| ||||||||||||| ||||||||| |||  | |||| |||||||||||||||| ||||||||||||||||| ||||||| ||| ||||    
T  12938310 tggctattgattatggagaaaataaaagagagataaatatgaatgtaatttgcatttaatttcatgagaataaacaaaagtttttcttgaaagagat 12938214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 507 - 739
Target Start/End: Complemental strand, 8701764 - 8701525
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||||||||||||||||||| |||||| || |||||||| | ||||||  |||||| |||||| || |||||||| ||||||||||||       ||    
T  8701764 ttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcta 8701665  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnnnn 699  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||| ||||||||| ||||||| || |||||| |||| ||  |||||||||           
T  8701664 ttggttatggaaaaaatggaagagagagaaaattaaatgaaatttgtatttaatttcatgagaacaagcaaaagtttttattggaaaagatgattttttt 8701565  T
Q  700 naaaaacaagattaaataggagaaaagtgtgtcatttttg 739  Q
     |||||||||||||||||  | |||||| |||| ||||||    
T  8701564 aaaaaacaagattaaatataataaaagtttgtcttttttg 8701525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 501 - 681
Target Start/End: Complemental strand, 11617192 - 11617005
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||  || ||||  ||| ||||||||||||||||||||| ||||||||||||       
T  11617192 tcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11617093  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        |||||||||| |  ||||| |||||||||||||||| |||| ||||||||||| ||||||||| ||||| |||||| |||||||    
T  11617092 tggctattggttatagtaaaaataaaagagagagaaaattgaatgaaatttgcattttattttatgaaaataagcaaaagtttttctt 11617005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 501 - 678
Target Start/End: Original strand, 6765925 - 6766110
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||| |||||||||| |||||| || |||||||| | ||||||  |||||| || ||||||||||||||| ||||||||||||       
T  6765925 tcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaatttttat 6766024  T
Q  598 ----tattggttatgg-agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
        |||||||||||| | |||||| ||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||    
T  6766025 tgactattggttatggaaaaaaatggaagagagagaaaattgaatgtaatttacatttaatttaatgagaataaacaaaagctttt 6766110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 41528425 - 41528246
Alignment:
Q  501 tcacatttattaagaaaactaaaa-cataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-- 597  Q
    ||||| |||||||||||| ||||| |||||||||||| || |||||||| ||||||||  ||| ||    ||||||||||||||| ||||||||||||      
T  41528425 tcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttca 41528326  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  41528325 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 41528246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 501 - 692
Target Start/End: Original strand, 24204521 - 24204719
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||  ||||||||  |||||| |||||||||||||| ||| |||| |||||||       
T  24204521 tcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcat 24204620  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
        ||||||||||| |||||||| ||||||||||||||| |||  ||||| |||||||| | |||||||||||| |||  ||||||| ||||||||||    
T  24204621 tggctattggttatgaagaaaatggaagagagagaaaattgaatataatttacatttaatatcatgagaataaactaaattttttcttgaaaaagatga 24204719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 527 - 672
Target Start/End: Complemental strand, 14874105 - 14873952
Alignment:
Q  527 taagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaa 619  Q
    ||||| ||||||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||| ||||||       ||||||||||||||||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggagaaaatgaa 14874006  T
Q  620 agagagagaaaattaaatgcaatttgca-tttaattttatgagaataaacaaaa 672  Q
    ||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  14874005 agagagataaaattaaatgtaatttgcattttaattatatgagaataaacaaaa 14873952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 508 - 681
Target Start/End: Complemental strand, 28858473 - 28858290
Alignment:
Q  508 tattaagaaaactaaaacataagaatttggaggatagt---tttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    ||||||||||||||||||||||||||||  |  |||||   ||| ||||||||  ||| |||||||||||||| |||||| ||||| ||||||           
T  28858473 tattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcattggc 28858374  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||||||||| |  |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  28858373 tattggttattgtaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 28858290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 501 - 740
Target Start/End: Original strand, 9864710 - 9864955
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatag-ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta 599  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||||  |||||| |||||| || |||||| | |||||||||||| |    
T  9864710 tcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattttca 9864809  T
Q  600 ttgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    ||||       |||||||||||||| |  ||||| |||||| |||| |||||||||||||||| |||||||||| |||| | |||||||  ||||||||     
T  9864810 ttggcaattgattatggagaaaatgga--agagataaaattgaatgtaatttgcatttaatttcatgagaataagcaaatgtttttcttggaaaagatgg 9864907  T
Q  693 nnnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
            |||||||| ||||||||||| |||||| |||| |||||||    
T  9864908 tttttaaaaaaaacaaaattaaataggataaaagtttgtcttttttgc 9864955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 29524033 - 29524205
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||| |||||||||| |||||||||||| || ||| |||| ||||||||  |||||| |||||| || |||||||| |||||||||||| ||    
T  29524033 tcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 29524132  T
Q  601 tg-------gttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    ||       |||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  29524133 tggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 29524205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 501 - 678
Target Start/End: Complemental strand, 35023066 - 35022881
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  |||||  |||||| ||||||||||| ||||||||||||       
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattttcat 35022968  T
Q  598 ------tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
          ||||| ||| ||||||||||  |||||||||||||| ||| ||||||||||||||||| ||||||  ||||||||| ||||    
T  35022967 ttgctatattgtttaaggagaaaatggtagagagagaaaattgaatacaatttgcatttaatttaatgagataaaacaaaagatttt 35022881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 507 - 687
Target Start/End: Complemental strand, 33677645 - 33677458
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    |||||| |||||||||||||||| |||||| || |||||||| | ||||||  ||  |  |||||||||||||||||| ||||||||||||       ||    
T  33677645 ttattacgaaaactaaaacataaaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcattgacta 33677546  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||||||||||||||||  |||||| |||||||| ||||  ||| ||||||||||| ||||||||||||||||| ||||||| |||||    
T  33677545 ttggttatggagaaaattgaagagaaagaaaattgaatgttattagcatttaatttcatgagaataaacaaaagtttttcttgaaaaa 33677458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 507 - 687
Target Start/End: Complemental strand, 5963362 - 5963176
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg--- 603  Q
    |||||||||||||||||| |||||||||| |||  || |||| ||||||||  || ||| ||||||||| ||| |||| ||||| ||||||||||||       
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggcta 5963264  T
Q  604 ----ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
        ||||| |||||||| ||||||||||||||| |||| |||||||||||||| | || |||||||| ||||| ||||||| |||||    
T  5963263 ttggttatgaagaaaatggaagagagagaaaattgaatgtaatttgcatttaatgtcataagaataaagaaaagtttttcttgaaaaa 5963176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 7645219 - 7645400
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| | || |||||||| ||| ||| || ||| || |||| ||| |||||||||||| ||    
T  7645219 tcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcat 7645318  T
Q  601 tgg-------ttatggagaaaatg---aaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||       ||||||||||||||   ||  | |||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  7645319 tggctattaattatggagaaaatggttaattatagagaaaattgaatgtaatttgcatttaatttcatgagaataaacaaaa 7645400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 11030988 - 11031077
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||| |||||  |||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  11030988 aagttttatagaaagatataaaaacaatttttattggttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 11031077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 505 - 692
Target Start/End: Complemental strand, 44455153 - 44454961
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatt--tt---ta 599  Q
    |||||||||||||||||||| ||| |||||||||| |||||||| ||||||||  || ||| |||||| || |||| | | ||||| ||||  ||   ||    
T  44455153 atttattaagaaaactaaaatatatgaatttggagtatagttttttgtgttttattttgaataagtttcatgggaaaacgtaaaaaaaattcattggcta 44455054  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    ||| |||| ||||||||| |||||||  |||||| |||| |||||||||||||||| |||||||||| ||| || |||||||  |||||||||    
T  44455053 ttgattatagagaaaatggaagagaggaaaaattgaatgtaatttgcatttaatttcatgagaataagcaagagtttttctttgaaaagatga 44454961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 550 - 687
Target Start/End: Original strand, 40584439 - 40584583
Alignment:
Q  550 tgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtt-------atggagaaaatgaaagagagagaaaattaaatgcaat 642  Q
    ||||||||  || ||| ||||||||| |||||||| |||||||||||| |||||||       ||||  |||||||||||||||||||||| |||| |||    
T  40584439 tgtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgggaaaaatgaaagagagagaaaattgaatgtaat 40584538  T
Q  643 ttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    ||||||||||||| |||| |||||||||||| ||||||| |||||    
T  40584539 ttgcatttaatttcatgaaaataaacaaaagtttttcttgaaaaa 40584583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 26998485 - 26998323
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||||||||   | |||| | ||||||||| |||||| |  ||  || |||||||||||||||||| |||||||||||| ||    
T  26998485 tcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcat 26998386  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  26998385 tggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 26998323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 501 - 638
Target Start/End: Original strand, 35115795 - 35115940
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaa-aagttttataggaagatgaaaaaacaattt--- 596  Q
    ||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||  ||   || ||||||||||| |||||| |||||||||||       
T  35115795 tcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttca 35115894  T
Q  597 ----ttattggttatggagaaaatgaaagagagagaaaattaaatg 638  Q
        ||||||||||||||||||||| ||||||| ||||||| ||||    
T  35115895 tttgttattggttatggagaaaatggaagagagtgaaaattgaatg 35115940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 507 - 673
Target Start/End: Original strand, 23987022 - 23987188
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta 606  Q
    ||||||||||||||||||||||| ||||| ||  |||  ||| | ||||   ||||||| ||| || |||||||| || ||||| |||||| |||| |||    
T  23987022 ttattaagaaaactaaaacataataatttagaatataactttttatgttcatcttggaataagcttcataggaagttgcaaaaataattttcattgatta 23987121  T
Q  607 tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaag 673  Q
    ||||||||||   || ||||||| ||| ||| |||||| ||||||||||||| ||||||||||||||    
T  23987122 tggagaaaatatgagggagagaagattgaattcaatttacatttaattttataagaataaacaaaag 23987188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 633
Target Start/End: Complemental strand, 43415569 - 43415434
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||| |||||||||||||| ||||||||||| || ||| |||| ||||||||  ||  ||||||||||||||||||||| |||||||||||| ||    
T  43415569 tcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcat 43415470  T
Q  601 tggttatgga---gaaaatgaaagagagagaaaatt 633  Q
    || || |  |   |||||||||||||||||||||||    
T  43415469 tgtttttaaaaatgaaaatgaaagagagagaaaatt 43415434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 32010270 - 32010108
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||| |||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||| ||||| |||||| ||    
T  32010270 tcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32010171  T
Q  601 tggt-------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||       ||| |||||||||||| |||||| |||||||||||| |||||||||||||||    
T  32010170 tggtagttgattatagagaaaatgaaaaagagagcaaattaaatgcactttgcatttaatttt 32010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 672
Target Start/End: Original strand, 30830590 - 30830766
Alignment:
Q  503 acatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatg-aaaaaacaattt----- 596  Q
    |||||||||||||||| ||||||||||||| |||||| ||   ||| ||||||||  ||| || |||||| ||  ||||||  |||||| |||||         
T  30830590 acatttattaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttgaaataagtttcatgagaagatttaaaaaaaaatttcattg 30830689  T
Q  597 -ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
     |||||| |||| |||||||||||| ||||||||||||  ||| |||||||||||||||| |||||||||| |||||    
T  30830690 gttattgattattgagaaaatgaaaaagagagaaaattgtatgtaatttgcatttaatttcatgagaataatcaaaa 30830766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 597
Target Start/End: Original strand, 40808712 - 40808807
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt 597  Q
    ||||| ||||||||||||||||| |||||||||||| || |||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||    
T  40808712 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaatttt 40808807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 564 - 672
Target Start/End: Original strand, 30421237 - 30421352
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaatttttattggttatggag-------aaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||||| ||||||| ||||||||||||||| | ||||  |        ||||||||||| ||||||||||||||| ||||| |||||||||||    
T  30421237 aaaaagttttataagaagatgtaaaaacaatttttatcgattattaatttttaaaaaaatgaaagaaagagaaaattaaatgtaatttacatttaatttt 30421336  T
Q  657 atgagaataaacaaaa 672  Q
    || |||||||||||||    
T  30421337 ataagaataaacaaaa 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 16179645 - 16179705
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagag 627  Q
    ||||||||||| |||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  16179645 aagttttatagaaagatgtaaaaacaaattttattggttattgagaaaatgaaagagagag 16179705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 8032726 - 8032823
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattg-------gttatggagaaaatgaaa-gagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||||||||       ||||| |||||||||||| ||||||| ||||| |||||| |||||||||||||||    
T  8032726 aagttttataggaagatgtaaaaacaatttttattggttgctagttattgagaaaatgaaaggagagagcaaattgaatgcattttgcatttaatttt 8032823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 609 - 671
Target Start/End: Original strand, 39696906 - 39696968
Alignment:
Q  609 gagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaa 671  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  39696906 gagaaaatggaagaaagagaaaattaaatgtaatttgcatttaatttcgtgagaataaacaaa 39696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 4891630 - 4891793
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta 599  Q
    |||||||||||||||||||||||| |||  | |||| |  |||||||| | ||||| |  ||| || |||||||||||||||||| ||||||||||||||    
T  4891630 tcacatttattaagaaaactaaaatatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttta 4891729  T
Q  600 ttgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||       ||||  ||||||||||| |||||| | ||| |||||| ||| |||||||||||    
T  4891730 ttggtagttgattataaagaaaatgaaaaagagagcagattgaatgcactttacatttaatttt 4891793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 33932915 - 33933073
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---t 597  Q
    ||||| ||||||||||||||||||||||  | |||| || ||| |||| ||| || | ||||||  ||||||||||| |||||| ||| |||||||   |    
T  33932915 tcacacttattaagaaaactaaaacatagtattttgtagtataattttttgtattattcttggattaagttttatagaaagatgtaaacacaatttcggt 33933014  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||| || || |||||||||||||  |||| ||| | ||||||| || |||||||||||    
T  33933015 tattagtcatagagaaaatgaaagtaagagcaaaatgaatgcaacttacatttaatttt 33933073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 607
Target Start/End: Complemental strand, 4707585 - 4707483
Alignment:
Q  502 cacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttatt 601  Q
    ||||||||||||||| |||||||||| |   ||||||| |||||||| |||||||| ||| ||| |||||| |  ||||||||  ||||||||||| |||    
T  4707585 cacatttattaagaacactaaaacatga---tttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattttcatt 4707489  T
Q  602 ggttat 607  Q
    ||||||    
T  4707488 ggttat 4707483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 649
Target Start/End: Complemental strand, 9709641 - 9709526
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaaagagagagaaaatt 633  Q
    |||||||  |||||| | |||| || ||||||||||||||||||  |||||||||||       ||||| |||| ||||||||||||||||||  |||||    
T  9709641 atagtttcttgtgttatccttgaaacaagttttataggaagatgtgaaaacaattttcatttgttattgattattgagaaaatgaaagagagaacaaatt 9709542  T
Q  634 aaatgcaatttgcatt 649  Q
     |||||||||||||||    
T  9709541 gaatgcaatttgcatt 9709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 28584953 - 28585018
Alignment:
Q  362 tcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtgg 427  Q
    ||||||| ||||| ||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||    
T  28584953 tcatttgtttaaaataaatgaagaatgtcatttggtgaaagatagataccaaaaagtagatagtgg 28585018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 507 - 656
Target Start/End: Complemental strand, 38071157 - 38071002
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg--- 603  Q
    |||||||||||||||||||||   | |||| |  |||||||| |||||| |  ||| || |||||||| ||||||||| |||||||||||| |||||       
T  38071157 ttattaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattggtag 38071058  T
Q  604 ----ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
        |||| |||||||||||| | |||| ||||| |||||| ||| |||||||||||    
T  38071057 ttgattatagagaaaatgaaa-atagagcaaattgaatgcactttacatttaatttt 38071002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 14565475 - 14565528
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  |||||||||||||||||||||||||||||    
T  14565475 ttatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaatttta 14565528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 657
Target Start/End: Original strand, 18833902 - 18834065
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||| |||||| ||   ||||||  | ||| |||| |||||| | ||||||| |||||| || | |||||| |||||||||| | ||    
T  18833902 tcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 18834001  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  18834002 tggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 18834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 586 - 655
Target Start/End: Original strand, 35245815 - 35245884
Alignment:
Q  586 aaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    |||||||||||| |||| |||||||||||||| ||||||| | ||||  ||| | |||||||||||||||    
T  35245815 aaaaacaattttcattgattatggagaaaatggaagagagggcaaatcgaatactatttgcatttaattt 35245884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 15709843 - 15709772
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaatta 463  Q
    |||||| |||||||||| | | |||| |||||||||||| |||||| ||||||||| ||||||| ||||||||    
T  15709843 atttggagagagataaacatataaaa-tagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 32428138 - 32428098
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagt 545  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  32428138 atttattaaaaaaactaaaacataagaatttggagtatagt 32428098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 633
Target Start/End: Original strand, 5280603 - 5280638
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaatt 633  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5280603 tattggttatggaaaaaatgaaagagagagaaaatt 5280638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 35316898 - 35316828
Alignment:
Q  393 ttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||| |||||||| | |||||||| ||||| |||||| |||||| ||||||||||||| ||| |||||||||    
T  35316898 ttggagagagatagacacaaaaaa-tagatggtggatcctaccactaagtgggtcccaccatcattaattat 35316828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 606
Target Start/End: Complemental strand, 9294816 - 9294714
Alignment:
Q  504 catttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg 603  Q
    ||||||||||||||||||||| |||  | |||| || ||| |||| ||| |||| |||| || |||||| || | || ||| |||||||||| |||||||    
T  9294816 catttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttcttgaaataagtttcatggaaaaatgtaaaaacaattcttattgg 9294717  T
Q  604 tta 606  Q
    |||    
T  9294716 tta 9294714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 535
Target Start/End: Original strand, 11825351 - 11825385
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaattt 535  Q
    ||||| |||||||||||||||||||||||||||||    
T  11825351 tcacacttattaagaaaactaaaacataagaattt 11825385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 792458 - 792511
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  792458 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 792511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 4033777 - 4033830
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  4033777 ttatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaatttta 4033830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 5091642 - 5091695
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  5091642 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 5091695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 10478232 - 10478179
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  10478232 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 10478179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 33635390 - 33635337
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  33635390 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 33635337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 43451559 - 43451506
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  43451559 ttatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaatttta 43451506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 6191213 - 6191035
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||  ||||||||||||||||||||| ||||||||||||       
T  6191213 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcat 6191114  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  6191113 tggctattggttatggagaaaatgaaagagagataaaattaaatgtaattttcatttaattttatgagaataaacaaaa 6191035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 18102698 - 18102520
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  18102698 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 18102599  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         |||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  18102598 tggccattggttatggaaaaaatgaaagagagtgaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 18102520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 507 - 681
Target Start/End: Complemental strand, 25944738 - 25944557
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg--- 603  Q
    |||||||||||||||||| |||||||||||||| |||  ||| ||||||||  ||||||||||||||||||||||||| |||||||||||| |||||       
T  25944738 ttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcca 25944639  T
Q  604 ----ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
        ||||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  25944638 ttggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 25944557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 14806037 - 14805866
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||       
T  14806037 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtatttt-ctttgaaaaagttttataggaagatgtaaaaacaattttcat 14805939  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  14805938 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 14805866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 15253031 - 15252860
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||       
T  15253031 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtatttt-ctttgaaaaagttttataggaagatgtaaaaacaattttcat 15252933  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  15252932 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 15252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 19912761 - 19912933
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt---- 596  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||| || ||| |||||||||||        
T  19912761 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcat 19912860  T
Q  597 ---ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
       |||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||    
T  19912861 tggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttcatgagaataa 19912933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 25737619 - 25737791
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||||| | |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||       
T  25737619 tcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 25737718  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  25737719 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 25737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 45486123 - 45485951
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||| ||||||       
T  45486123 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcat 45486024  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  45486023 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 45485951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 46760249 - 46760421
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||       
T  46760249 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 46760348  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||| ||| |||| |||||||||||||||||||||||||||    
T  46760349 tggctattggttatggaaaaaatgaaagaaagagaatattgaatgtaatttgcatttaattttatgagaataa 46760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 35923419 - 35923248
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||  |||||||||||||||||| |||||| ||||||||||||       
T  35923419 tcacacttattaagaaaactaaaacataaaaatttggagtatagtttt-tgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 35923321  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  35923320 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35923248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 520 - 681
Target Start/End: Original strand, 20123691 - 20123859
Alignment:
Q  520 taaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggaga 612  Q
    |||||||||||||||||||| |||||||| ||||| ||  |||||||||||||||||| |||||| |||||||||||| |||||       ||||||| |    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatggaaa 20123790  T
Q  613 aaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  20123791 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttctt 20123859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 4910627 - 4910812
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||| | |||||||||||||||||||||| || ||| ||||  |||||||  || |||||||||||||||||||||| ||||| |||||| ||    
T  4910627 tcacacttatttaaaaaactaaaacataagaatttgaagtatattttt--gtgttttctttagaaaaagttttataggaagatgtaaaaataattttcat 4910724  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||       ||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||||||  |||||||    
T  4910725 tggctattgattatggaaaaaatgaaagagagataaaattgaatgtaatttgcatttaattttatgagcataaacaaaactttttctt 4910812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 47779772 - 47779600
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||||||||||||||||| |||||||||||| || |||||||| ||||||||  || ||| |||||| || |||||||| |||||||||||| ||    
T  47779772 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcat 47779673  T
Q  601 -------tggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
           |||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  47779672 tggcaactggttatggaaaaaataaaagaaagagaaaattaaatgtaatttgcatttaatttcatgagaataa 47779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 22632257 - 22632079
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||| ||||| | |||| || |||| ||| ||||||||  ||| || |||||| || |||||||| ||||||||||||       
T  22632257 tcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcat 22632158  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  22632157 tggatattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagcaaaa 22632079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 12632336 - 12632438
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||  ||| ||||||||| ||||||||||| |||||||||||| ||    
T  12632336 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcat 12632435  T
Q  601 tgg 603  Q
    |||    
T  12632436 tgg 12632438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 507 - 681
Target Start/End: Complemental strand, 14574726 - 14574545
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaa-aagttttataggaagatgaaaaaacaatttt-------t 598  Q
    ||||||||||||| |||| |||||||||||||| |||||||| |||||||| ||||  || |||||| || |||||||| ||||| |||||        |    
T  14574726 ttattaagaaaaccaaaatataagaatttggagtatagttttttgtgtttt-cttgataataagtttcatgggaagatgtaaaaataatttccattgtct 14574628  T
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||||||||| |||||||| ||||||| ||||||| | |  ||||||||||||||||||||||||||| |||||| |||||||    
T  14574627 attggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataagcaaaagtttttctt 14574545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 44683045 - 44682868
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||| ||||||||||||| || |||||||||||||| ||| | || ||||||||  |||||| |||||| ||  ||||||| ||||||||||||       
T  44683045 tcacattcattaagaaaactagaaaataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcat 44682946  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
        |||||||||||||| |||||||||| | ||||||||  ||| |||||||| ||||||| ||||||||||||||||    
T  44682945 tgactattggttatggag-aaatgaaagatatagaaaattggatgtaatttgcaattaatttcatgagaataaacaaaa 44682868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 571 - 672
Target Start/End: Original strand, 47557663 - 47557771
Alignment:
Q  571 tttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaa 663  Q
    |||||||||||||| |||||||||||| |||||       ||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  47557663 tttataggaagatgtaaaaacaattttcattggctattaattatggaaaaaatgaaagagaaagaaaattaaatgtaatttgcatttaattctatgagaa 47557762  T
Q  664 taaacaaaa 672  Q
    |||||||||    
T  47557763 taaacaaaa 47557771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 515 - 691
Target Start/End: Complemental strand, 11780171 - 11779989
Alignment:
Q  515 aaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------tattggttatg 608  Q
    |||||||||| |||||||||||||  ||||||||  |||||||  ||  || || |||||| |||||||| ||||| |||||       ||||  |||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttctttaaaataaattttattggaagatgtaaaaataatttcattgactatttcttatg 11780072  T
Q  609 gagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
     |||||||| |||| ||||||||||  ||| |||||||||||||||||||||||||||||||||| |||| || |||||||||    
T  11780071 aagaaaatggaagaaagagaaaatttgatgtaatttgcatttaattttatgagaataaacaaaagttttttttgaaaaagatg 11779989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 2610664 - 2610753
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaa 687  Q
    |||||||||||||||||||| ||||||   |||||| |||| |||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  2610664 tattggttatggagaaaatggaagagaagaaaaattgaatgtaatttgcacttaatttcatgagaataaacaaaagtttttcttaaaaaa 2610753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 564 - 739
Target Start/End: Complemental strand, 9158194 - 9158014
Alignment:
Q  564 aaaaagttttataggaagatgaaaaaacaattttt-------attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||||||||||||||| ||||||||||||        |||||||||| | ||||||||||||| | ||| || |||| |||||||||||||||||    
T  9158194 aaaaagttttataggaagatgtaaaaacaattttctttggccattggttatgaa-aaaatgaaagagaaaaaaatttgaatgtaatttgcatttaatttt 9158096  T
Q  657 atgagaataaacaaaagcttttcttaaaaaagatgannnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttg 739  Q
    || |||||||||||||| |||||||  |||||| ||        |||||||||||||||||| | |||||| |||| ||||||    
T  9158095 ataagaataaacaaaagtttttcttggaaaaga-gattttttttaaaaacaagattaaatagaataaaagtttgtcttttttg 9158014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 507 - 681
Target Start/End: Complemental strand, 15995882 - 15995700
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaattt-------tt 598  Q
    ||||||||||||| |||| |||||||||||||| |||||||| | |||||||  |   || |||||| || | |||||| ||||| |||||       ||    
T  15995882 ttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttcttcataataagtttcatggaaagatgtaaaaataatttccattggtt 15995783  T
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttctt 681  Q
    |||||||||| |||||||| ||||||| ||||||| | |  ||||||||||||||||||||||||||| |||||| |||||||    
T  15995782 attggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataagcaaaagtttttctt 15995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 656
Target Start/End: Complemental strand, 38260444 - 38260322
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatg-------gagaaaatgaaagagagagaaaatt 633  Q
    |||||||| |||||| | |||| || ||||||||||| ||| || ||||| |||||| |||||||||        ||||||||||||||||||| |||||    
T  38260444 atagttttttgtgttattcttgaaataagttttatagaaagttgtaaaaataattttcattggttatttattattgagaaaatgaaagagagagcaaatt 38260345  T
Q  634 aaatgcaatttgcatttaatttt 656  Q
    ||||||| |||||||||||||||    
T  38260344 aaatgcactttgcatttaatttt 38260322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 606
Target Start/End: Complemental strand, 10248698 - 10248591
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaa-tttggaggatagttttct-gtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttt 598  Q
    ||||||||||||||||||||||||||| || | |||| |  |||||||||| ||||| | |||| || ||||||||||| |||||| ||||||||||||     
T  10248698 tcacatttattaagaaaactaaaacattagtagtttgtaacatagttttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaattttc 10248599  T
Q  599 attggtta 606  Q
    ||||||||    
T  10248598 attggtta 10248591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 503 - 656
Target Start/End: Complemental strand, 39170700 - 39170540
Alignment:
Q  503 acatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattg 602  Q
    |||||||||||||||| ||||| |||  | |||| |  |||||||  |||||| | |||| || |||||||||| ||||||| |||||||||||| |||     
T  39170700 acatttattaagaaaattaaaatatagtagtttgtaacatagtttattgtgttatccttgaaataagttttatacgaagatgtaaaaacaattttcattt 39170601  T
Q  603 gt-------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||       ||| |||||||||||||||| || ||||| |||||| |||||||||||||||    
T  39170600 gtcattgattattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt 39170540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 578 - 686
Target Start/End: Original strand, 27810804 - 27810919
Alignment:
Q  578 gaagatgaaaaaacaatttttattggttatgga-------gaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaa 670  Q
    ||||||| |||||||||||||||||||||| ||       ||||||| ||||||  ||||||| |||| |||||||||||||||| |||||||||   ||    
T  27810804 gaagatgtaaaaacaatttttattggttattgattatatagaaaatggaagagatggaaaattgaatgtaatttgcatttaatttcatgagaatatgtaa 27810903  T
Q  671 aagcttttcttaaaaa 686  Q
    ||| ||||||||||||    
T  27810904 aagtttttcttaaaaa 27810919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 657
Target Start/End: Original strand, 35084052 - 35084215
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| ||| |||||||||||||||| |  ||||||    |||||||| |||||| | |||| || |||||| |||  |||||| |||||||||| ||||    
T  35084052 tcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttcttgaaataagtttcataaaaagatgtaaaaacaattcttat 35084151  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    |||       |||||||||||||||||  ||||  ||||| |||||||||||||||||||||||    
T  35084152 tggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgcatttaatttta 35084215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 37767011 - 37767067
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgtttt 557  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgtttt 37767067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 625 - 672
Target Start/End: Original strand, 12633110 - 12633157
Alignment:
Q  625 gagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  12633110 gagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12633157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 686
Target Start/End: Original strand, 19492493 - 19492579
Alignment:
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaa 686  Q
    |||||||||||||||||  |||||| |||||||| |||  |||||| ||||||||| ||| ||||||  ||||| ||||||||||||    
T  19492493 ttggttatggagaaaatagaagagaaagaaaattgaatataatttgtatttaatttcatgcgaataagtaaaagtttttcttaaaaa 19492579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 23142519 - 23142620
Alignment:
Q  364 atttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaatta 463  Q
    |||| ||||||||||||   |||||| ||||| | ||||| | ||| |||||| ||||||||||||| ||||| |||||| |||||| || |||||||||    
T  23142519 atttccttaaactaaatggtgaatgtcatttgataagagaaagataaaaaaaaatagatagtggattataccactaagtgagtcccaccactattaatta 23142618  T
Q  464 tt 465  Q
    ||    
T  23142619 tt 23142620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 671
Target Start/End: Original strand, 35068885 - 35069004
Alignment:
Q  545 ttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaattt 644  Q
    |||| ||||||||  ||| ||||||||||||||||||||| |||||||||||| ||| | ||| |       |  | ||||| |||||| |||| |||||    
T  35068885 ttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattg-------gttatagagaaaaaattgaatgtaattt 35068977  T
Q  645 gcatttaattttatgagaataaacaaa 671  Q
    ||||||||| |||||||||||||||||    
T  35068978 gcatttaatattatgagaataaacaaa 35069004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 507 - 657
Target Start/End: Complemental strand, 40560539 - 40560382
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta 606  Q
    ||||||| |||||||| || ||| ||||||  | ||| |||| |||||| | |||| || ||||||||||| |||||| ||||| |||| | ||||||||    
T  40560539 ttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattggtta 40560440  T
Q  607 -------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
           |||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  40560439 aaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaatttta 40560382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 507 - 657
Target Start/End: Complemental strand, 48879545 - 48879388
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggtta 606  Q
    |||||||||||||||| || |||  |||||  | ||| |||| ||| || | ||||||| ||||||||||| |||||| ||||| |||| | ||||||||    
T  48879545 ttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattggtta 48879446  T
Q  607 -------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
           |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  48879445 aaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 48879388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 656
Target Start/End: Complemental strand, 3778041 - 3777984
Alignment:
Q  599 attggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    ||||||||| |||||||||||||||| || ||||| |||||| ||| |||||||||||    
T  3778041 attggttattgagaaaatgaaagagaaagcaaattgaatgcacttttcatttaatttt 3777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 657
Target Start/End: Original strand, 43107856 - 43108019
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||| || ||   |||||  | ||| |||| |||||| | ||||||| |||||| || | |||||| ||||| |||| | ||    
T  43107856 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 43107955  T
Q  601 tggtta-------tggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||       |||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  43107956 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 43108019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 607
Target Start/End: Original strand, 8015732 - 8015771
Alignment:
Q  568 agttttataggaagatgaaaaaacaatttttattggttat 607  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  8015732 agttttataagaagatgtaaaaacaatttttattggttat 8015771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 9559056 - 9559126
Alignment:
Q  393 ttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||| |||||||| |||||||||| ||||| |||| | |||||| ||||||||||||| ||| |||||||||    
T  9559056 ttggagagagatagatacaaaaaa-tagatggtgggtcctaccactaagtgggtcccaccatcattaattat 9559126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 33450582 - 33450507
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||| |||||||| | |||||| | ||||| |||| | | |||| ||||||||||||||||| |||||||||||    
T  33450582 atttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattattt 33450507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 47500282 - 47500357
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||| |||||||| | |||||| | ||||| |||| | | |||| ||||||||||||||||| |||||||||||    
T  47500282 atttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattattt 47500357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 535
Target Start/End: Original strand, 2633329 - 2633363
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaattt 535  Q
    ||||||||||||||||||||||||||||| |||||    
T  2633329 tcacatttattaagaaaactaaaacataataattt 2633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 610 - 692
Target Start/End: Original strand, 4237823 - 4237904
Alignment:
Q  610 agaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    |||||||| |||||| | | |||| |||  ||||||||||||||||||| ||||| |||||||| |||||||  |||||||||    
T  4237823 agaaaatggaagagaaatataattgaatataatttgcatttaattttattagaat-aacaaaagtttttctttgaaaagatga 4237904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 19933116 - 19933169
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  19933116 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 19933169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 19964255 - 19964308
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  19964255 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 19964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 21654182 - 21654235
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    |||||||||||||||||  ||||  ||||| |||| ||||||||||||||||||    
T  21654182 ttatggagaaaatgaaaaggagaacaaattgaatgtaatttgcatttaatttta 21654235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 22111391 - 22111444
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  22111391 ttatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaatttta 22111444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 23106506 - 23106453
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  23106506 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 23106453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 23731613 - 23731560
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||||||||||| |||||||||||||||    
T  23731613 ttatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 23731560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 35181245 - 35181192
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  35181245 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 35181192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 40583198 - 40583145
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  40583198 ttatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaatttta 40583145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 45598957 - 45598904
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  45598957 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 45598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 1e-49; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 507 - 666
Target Start/End: Original strand, 11082244 - 11082410
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||| ||||| ||||||||||||       ||    
T  11082244 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattggcta 11082343  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    ||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  11082344 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 11082410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 21542586 - 21542414
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaattttta- 599  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||     
T  21542586 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 21542487  T
Q  600 ------ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
          ||||||||||| ||||||||||| | |||||||| |||| |||||||||||||| ||||||||||||    
T  21542486 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataa 21542414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 35129047 - 35129220
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatg-aaaaaacaattt--- 596  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| || |||||||||       
T  35129047 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttca 35129146  T
Q  597 ----ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        |||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||    
T  35129147 ttggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttacgagaataa 35129220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 501 - 692
Target Start/End: Original strand, 7274868 - 7275066
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||| ||| ||||  |||||| |||||| || |||||||| ||||||||||||       
T  7274868 tcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttcat 7274967  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
        ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||| |||| ||  |||||||||    
T  7274968 tggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataagcaaaagtttttattggaaaagatga 7275066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 505 - 666
Target Start/End: Original strand, 3095717 - 3095884
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||| |||||||| ||| | |||||||||||||||||||| ||||||||||||           
T  3095717 atttattaagaaaactaaagcataaaaatttggagtatagttttttgtgtttt-ctttggaaaagttttataggaagatgtaaaaacaattttcattggc 3095815  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
    ||||| ||||||| ||||||||| | |||||||||| |||| |||||||||||||||||||||||||||    
T  3095816 tattgattatggaaaaaatgaaataaagagaaaattgaatgtaatttgcatttaattttatgagaataa 3095884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 34177634 - 34177806
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||| |||||||||||||||||||  |||||||| ||||||||  |||||||||  |||||||| ||||| ||||||||||||       
T  34177634 tcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcat 34177733  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||    
T  34177734 tggctattggttatggaaaaaatgaaagaaagagataattgaatgtaatttgcatttaattttatgagaataa 34177806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 505 - 672
Target Start/End: Original strand, 30794189 - 30794363
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    |||||||||||||||||||| ||||||||||| || ||| |||| | ||||||  |||||| |||||||||||||||||| ||||||| ||||           
T  30794189 atttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcattggc 30794288  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||| |||||||||||  |||||||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  30794289 tattggtgatggagaaaatagaagagagagaaaattaaatctaatttgcatttaatttcatgagaataaaaaaaa 30794363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 501 - 678
Target Start/End: Original strand, 12461422 - 12461606
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagtttt-ataggaagatgaaaaaacaatttt-- 597  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||| | | ||||  ||| || ||||||| |||| |||||| ||||||||||||      
T  12461422 tcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaattttca 12461520  T
Q  598 -----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
         |||||||||||||||||||  |||||| |||||||| |||| |||||| ||||||||| ||||||||||||||||| ||||    
T  12461521 ttggctattggttatggagaaaatagaagagacagaaaattgaatgtaatttggatttaatttcatgagaataaacaaaagttttt 12461606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 688
Target Start/End: Original strand, 17751737 - 17751931
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| ||||| |||||||||||||| |||||||| ||||||||  || ||  ||||||| |   || ||| ||||||| |  | ||    
T  17751737 tcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttctttagattaagtttttttaaaaaatgtaaaaacagtgctcat 17751836  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaag 688  Q
    |||       |||||||||||||| |||||||| |||||| |||| |||||||||||| ||| || |||||||||||||| ||||||||||||||    
T  17751837 tggctattgattatggagaaaatggaagagagaaaaaattgaatgtaatttgcatttagtttcataagaataaacaaaagtttttcttaaaaaag 17751931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 598 - 672
Target Start/End: Complemental strand, 9428834 - 9428760
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||||||||| || ||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  9428834 tattggttatagaaaaaataaaagagagagaaaattaaatataatttgcattaaattttatgagaataaacaaaa 9428760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 656
Target Start/End: Original strand, 5300659 - 5300748
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||| ||| | |||| ||||| |||||| |||| ||||||||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattggttattgagaaaataaaaaaaagagcaaattgaatgcactttgtatttaatttt 5300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 4032156 - 4031991
Alignment:
Q  501 tcacatttattaagaaaactaaaacata--agaa-tttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt 597  Q
    ||||| ||||||||||||||||||||||  || | |||| |  |||||||| |||||| |  ||| || ||||||||| |||||||| ||||||||||||    
T  4032156 tcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaatttt 4032057  T
Q  598 tattggt-------tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
     ||||||       ||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  4032056 cattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 4031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 672
Target Start/End: Complemental strand, 31107254 - 31107181
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||| |||| || ||||||||||||| ||||| || |||| ||||||||||||||||||| |||||||||||||    
T  31107254 tattgattatagaaaaaatgaaagagaaagaaa-ttgaatgtaatttgcatttaattttataagaataaacaaaa 31107181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 776 - 816
Target Start/End: Complemental strand, 6922740 - 6922700
Alignment:
Q  776 taagtgtaggtcagttggtagctaccatgaataatttgtgc 816  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  6922740 taagtgtagttcagttggtagctaccatgaataatttgtgc 6922700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 9428913 - 9428857
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgtttt 557  Q
    ||||||||||||| |||||||||||||||||||||| || ||| |||| ||||||||    
T  9428913 tcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgtttt 9428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 656
Target Start/End: Complemental strand, 16524505 - 16524384
Alignment:
Q  541 atagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaatt 633  Q
    |||||||| |||||| |  ||| || |||||||||||||||||| |||||||||||| |||||       |||| |||||||||||| |||||  |||||    
T  16524505 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaa-agagaacaaatt 16524407  T
Q  634 aaatgcaatttgcatttaatttt 656  Q
     |||||| |||||||||||||||    
T  16524406 gaatgcactttgcatttaatttt 16524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 28863109 - 28863030
Alignment:
Q  348 agtaaagatcatcttcatttgcttaaactaaataaagaatgttatttggtgagagataaatacaaaaaagtagatagtgg 427  Q
    |||||||||| ||| |||||| ||||| |||||  |||||  ||||||||| || ||||||||||||| |||||||||||    
T  28863109 agtaaagatcttctccatttgtttaaaataaatggagaatactatttggtgggatataaatacaaaaaggtagatagtgg 28863030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 663
Target Start/End: Original strand, 7163843 - 7163881
Alignment:
Q  625 gagaaaattaaatgcaatttgcatttaattttatgagaa 663  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  7163843 gagaaaattaaatgcaatttgcatttaatttcatgagaa 7163881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 652
Target Start/End: Original strand, 16013491 - 16013583
Alignment:
Q  567 aagttttataggaagatgaaaaaacaatttttattgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaa 652  Q
    |||||||||||||||||| |||||||||||| |||||       |||| |||||||||||| |||||| ||||| |||||| ||| |||||||    
T  16013491 aagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcatttttcatttaa 16013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 602
Target Start/End: Original strand, 14573121 - 14573221
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    |||||||||||||||||||||||| ||| |||||||||| ||| |||| ||| ||||  ||| || |||| |||| ||| |||| ||||| |||||| ||    
T  14573121 tcacatttattaagaaaactaaaatatatgaatttggagtataatttt-tgtattttctttgaaataagtattatgggatgatgtaaaaataattttcat 14573219  T
Q  601 tg 602  Q
    ||    
T  14573220 tg 14573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 586 - 655
Target Start/End: Complemental strand, 16655269 - 16655200
Alignment:
Q  586 aaaaacaatttttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattt 655  Q
    |||| ||||||| ||| |||||  |||||||||||| ||||| ||| | |||||||||||||||||||||    
T  16655269 aaaatcaattttcattagttatacagaaaatgaaagggagagcaaaatgaatgcaatttgcatttaattt 16655200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 17598347 - 17598294
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  ||||| |||||||||||||||||||||||    
T  17598347 ttatggagaaaataaaaaagagaataaattgaatgcaatttgcatttaatttta 17598294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 31887224 - 31887277
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| ||| |||||  ||||||||||||| |||||||||||||||    
T  31887224 ttatggagaaaataaaaaagagaacaaattaaatgcaacttgcatttaatttta 31887277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 600
Target Start/End: Original strand, 5822027 - 5822126
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||||||||| || | | |||| || ||| |||  |||||| |  |||||| |||||| |||| |||||| |||||||||||||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttttat 5822126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 13888522 - 13888597
Alignment:
Q  391 atttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattattt 466  Q
    |||||| |||||||| | |||||| | ||||| |||| | |||||| ||| ||||||||||||| |||||||||||    
T  13888522 atttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaattattt 13888597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 597 - 691
Target Start/End: Complemental strand, 3102863 - 3102769
Alignment:
Q  597 ttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatg 691  Q
    ||||||||||||||||  ||| || |||||||||||  |||| |||| | |||||||||| |  |||||||||||||  ||| ||| ||||||||    
T  3102863 ttattggttatggagatcatggaaaagagagaaaatggaatgtaattagaatttaattttttatgaataaacaaaagtgttttttagaaaagatg 3102769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 12278760 - 12278707
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  12278760 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 12278707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Original strand, 17721912 - 17721965
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  17721912 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 17721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 658
Target Start/End: Original strand, 26540288 - 26540341
Alignment:
Q  605 tatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttat 658  Q
    |||||||||||| | |||||| | ||||| ||| ||||||||||||||||||||    
T  26540288 tatggagaaaatcagagagagtgtaaattgaatacaatttgcatttaattttat 26540341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 29698222 - 29698166
Alignment:
Q  407 atacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||||||||| ||||| |||||| |||||| ||||||||||||| ||| |||||||||    
T  29698222 atacaaaaaa-tagatggtggatcctaccattaagtgggtcccaccatcattaattat 29698166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 30766500 - 30766447
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  30766500 ttatggagaaaataaaaaggagaacaaattcaatgcaatttgcatttaatttta 30766447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 33756310 - 33756257
Alignment:
Q  604 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 657  Q
    |||||||||||||||||  |||   ||||| |||||||||||||||||||||||    
T  33756310 ttatggagaaaatgaaaaggaggacaaattgaatgcaatttgcatttaatttta 33756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 95; Significance: 5e-46; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 507 - 672
Target Start/End: Complemental strand, 10207 - 10035
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------ta 599  Q
    |||||||||||| |||||||||||||||||||   ||||||| ||||||||  || |||||||||||||||||||||| ||||||||||||       ||    
T  10207 ttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgacta 10108  T
Q  600 ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  10107 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattgtatgagaataaacaaaa 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 95; Significance: 5e-46; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 566 - 738
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||| ||||| ||||||||||||       
T  566 tcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 665  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 666  Q
        ||||||||||||| ||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||    
T  666 tggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataa 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 1180 - 935
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||  |||||||||| |||| ||||||||| |||||||| ||||||||  ||  |||||||||||||| |||||| ||||||| ||||       
T  1180 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 1081  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        ||||||||||||| |||||||||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||   ||||| ||     
T  1080 tgagtattggttatggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataaacaaaagtttttcttgggaaaga-gat 982  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||||| |||||| |||| |||||||    
T  981 tttttaaaaaaacaagattaaataggataaaagtttgtcttttttgc 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 501 - 740
Target Start/End: Complemental strand, 9140 - 8895
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||||||||||  |||||||||| |||| ||||||||| |||||||| ||||||||  ||  |||||||||||||| |||||| ||||||| ||||       
T  9140 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 9041  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgan 693  Q
        ||||||||||||| |||||||||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||   ||||| ||     
T  9040 tgagtattggttatggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataaacaaaagtttttcttgggaaaga-gat 8942  T
Q  694 nnnnnnnaaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
           |||||||||||||||||||| |||||| |||| |||||||    
T  8941 tttttaaaaaaacaagattaaataggataaaagtttgtcttttttgc 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 501 - 672
Target Start/End: Complemental strand, 78125 - 77947
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||  ||| |||||||| |||||||||||| ||||||||||||       
T  78125 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcat 78026  T
Q  598 ----tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
         |||||||||||| ||||||||||| || ||||||| |||| ||||| |||||||||||||||||||||||||||    
T  78025 tggccattggttatggaaaaaatgaaagaaagtgaaaattgaatgtaatttacatttaattttatgagaataaacaaaa 77947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 507 - 740
Target Start/End: Complemental strand, 157956 - 157717
Alignment:
Q  507 ttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattgg--- 603  Q
    ||||||||||||||||| |||||||||||| || |||||||| ||||||||  |||||| |||||| || || ||||| |||||||||||| |||||       
T  157956 ttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggcaa 157857  T
Q  604 ----ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatgannnnnnn 699  Q
        ||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||| ||||  | ||||||||||           
T  157856 ttggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttactgaaaaagatga-tatttt 157758  T
Q  700 naaaaacaagattaaataggagaaaagtgtgtcatttttgc 740  Q
     |||||||||||||||||| | |||||| |||| |||||||    
T  157757 taaaaacaagattaaatagaataaaagtttgtcttttttgc 157717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 690
Target Start/End: Original strand, 52699 - 52791
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagat 690  Q
    ||||| |||||||||||||  |||||||||||||||||||| |||| ||||||||||| |||| ||||| |||||| |||||||  |||||||    
T  52699 tattgattatggagaaaatagaagagagagaaaattaaatgtaattcgcatttaatttcatgaaaataagcaaaagtttttcttggaaaagat 52791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 527 - 670
Target Start/End: Original strand, 3447 - 3597
Alignment:
Q  527 taagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatgaa 619  Q
    ||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||| ||||| ||||||       ||||||||||||| ||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggaaaaaatgaa 3546  T
Q  620 agagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaa 670  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  3547 agagagagaaaattgaatgtaatttgcatttaattgtatgagaataaacaa 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 505 - 672
Target Start/End: Complemental strand, 155024 - 154851
Alignment:
Q  505 atttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt------- 597  Q
    ||||||||||||||||||||||||||||| || |  |||||||| ||| ||||  ||| |||||||||||||| |||||| |||||||||||            
T  155024 atttattaagaaaactaaaacataagaatctgaaatatagtttt-tgtattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggc 154926  T
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  154925 tattggttatggaaaaaatgaaagatagagaaaatttaatgtaatttgcatttaattttatgagaataaaaaaaa 154851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 501 - 672
Target Start/End: Original strand, 233480 - 233658
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaa-aagttttataggaagatgaaaaaacaattttta 599  Q
    |||||||||||||||||||||||| ||||||||||     |||||| | |||||||| |||  ||| |||||| || |||||||| ||||||| |||| |    
T  233480 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaaca-ttttca 233578  T
Q  600 ttggttatgga-------gaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaa 672  Q
    |||| ||||||       ||||||| ||||||| || |||| |||| |||||||||||||||| |||||||||| |||||    
T  233579 ttggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataagcaaaa 233658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 5868 - 6030
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt--- 597  Q
    ||||| |||||||||||| |||||||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||| ||||||||||||       
T  5868 tcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttcct 5967  T
Q  598 ---ta-ttggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
       || ||| |||| || ||||||||| |||||| ||||| |||||| |||||||||||||||    
T  5968 tgatagttgattatagaaaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 667
Target Start/End: Complemental strand, 40321 - 40174
Alignment:
Q  526 ataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttt-------tattggttatggagaaaatga 618  Q
    ||||||||||| || |||| ||| ||||||||  |||||| || |||||||| ||| || ||||||||||||       |||||||||| || ||||||     
T  40321 ataagaatttg-agtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttatagaaaaaatgg 40223  T
Q  619 aagagagagaaaattaaatgcaatttgcatttaattttatgagaataaa 667  Q
    | |||||||||| || |||| |||||||||||||||| |||||||||||    
T  40222 atgagagagaaagttgaatgtaatttgcatttaatttcatgagaataaa 40174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 692
Target Start/End: Complemental strand, 160314 - 160220
Alignment:
Q  598 tattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagcttttcttaaaaaagatga 692  Q
    ||||||||||||  |||||| |||| |||||||||| |||| |||||  ||||||||| || ||||||| |||||| |||||||  |||||||||    
T  160314 tattggttatgggaaaaatggaagaaagagaaaattgaatgtaatttatatttaatttcataagaataagcaaaaggttttcttggaaaagatga 160220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 208136 - 208066
Alignment:
Q  393 ttggtgagagataaatacaaaaaagtagatagtggattctaccaataagtgggtcccatcattattaattat 464  Q
    |||| |||||||||| |||||||| ||||| |||| | |||||| ||||||||||||||||| |||||||||    
T  208136 ttggagagagataaacacaaaaaa-tagatggtgggtcctaccactaagtgggtcccatcatcattaattat 208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 678
Target Start/End: Complemental strand, 900 - 848
Alignment:
Q  625 gagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagctttt 678  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||| ||||    
T  900 gagaaaattaa-tgtaatttgcatttaatttcatgagaataaacaaaagttttt 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 3336 - 3174
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| |||||||||  | |||| |  |||||||| |||||| |  ||| || |||||||||||||||||  |||||||||||  ||    
T  3336 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttccat 3237  T
Q  601 tgg-------ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttt 656  Q
    |||       |||| |||||||||||| ||| |  ||||| |||||| ||||||| |||||||    
T  3236 tggtagttgattatagagaaaatgaaaaagaaaacaaattgaatgcactttgcatataatttt 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 678
Target Start/End: Original strand, 5149 - 5315
Alignment:
Q  514 gaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttattggttatggagaa 613  Q
    |||||| |||||| || ||||||||   ||||||| ||| ||||  || ||| |||||||||   |||||  ||||| |||||||||||||||| |||||    
T  5149 gaaaacgaaaacaaaataatttggaaagtagttttttgttttttctttagaataagttttatgaaaagatataaaaataatttttattggttatagagaa 5248  T
Q  614 aatgaaagagagagaaaattaaatgcaatttgca--tttaattttatgagaataaacaaaagctttt 678  Q
     ||   || ||||| |||||||||  || |||||  |||||||| ||||||||||| ||||| ||||    
T  5249 gattggagggagagtaaattaaatataacttgcatttttaatttcatgagaataaataaaagttttt 5315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 607
Target Start/End: Original strand, 160912 - 161018
Alignment:
Q  501 tcacatttattaagaaaactaaaacataagaatttggaggatagttttctgtgttttgcttggaaaaagttttataggaagatgaaaaaacaatttttat 600  Q
    ||||| |||||||||||| |||||||||  | |||| |  |||||||  |||||| | |||| || |||||| |||| ||| || |||||||||||| ||    
T  160912 tcacacttattaagaaaattaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttcat 161011  T
Q  601 tggttat 607  Q
    |||||||    
T  161012 tggttat 161018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University