View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19988_high_15 (Length: 252)
Name: NF19988_high_15
Description: NF19988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19988_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 7 - 239
Target Start/End: Original strand, 38918736 - 38918968
Alignment:
| Q |
7 |
atggagacttagcaccaaaaagttcagaaggtaacaaaaccttgtccaattgataaacagccaaaggaaattgttgtctcaaagcattgttgataggtac |
106 |
Q |
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| T |
38918736 |
atggagacttagcaccaaaaagttcagaaggtaacaaaaccttgtccaattgataaacagccaaaggaaattgttgtctcaatgcattgttgataggtac |
38918835 |
T |
|
| Q |
107 |
agtaacaactccagttgaaacattgacttggttaccttgtgaagtgaagtgaagaccccagttaccttctttaccagaagcttgtgttctaactgggtta |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38918836 |
agtaacaactccagttgaaacattgacttggttaccttgtgaagtgaagtgaagaccccagttaccttctttaccagaagcttgtgttctaactgggtta |
38918935 |
T |
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| Q |
207 |
gaaactgttaagaaatcggaaagagagtagtat |
239 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
38918936 |
gaaactgttaagaaatcggaaagagagtagtat |
38918968 |
T |
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