View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19988_high_20 (Length: 224)
Name: NF19988_high_20
Description: NF19988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19988_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 48449696 - 48449489
Alignment:
| Q |
1 |
cagaataagacctctgcataatggaacgtctacataggtctatgctggagcgtgagcggcgaagaccataacgttcttttgtaatgtccttagttgaaga |
100 |
Q |
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| T |
48449696 |
cagaataagacctctgcataatggaacgtctacataggtctatgctggagcgcgagcggcgaagaccataacgttcttttgtaatgtccttagttgaaga |
48449597 |
T |
|
| Q |
101 |
cgttgttggagaggtaggtatgccaactgctgtgtaggccatagcttttgattgttgtgcaagtcagcaagatcctccactatattggatttctgtgaat |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
48449596 |
cgttgttggagaggtaggtatgccaactgctgtgtaggccatagcttttgattgttgtgcaagtcagcaagatactccactatattggatttctgtgaat |
48449497 |
T |
|
| Q |
201 |
caaaaact |
208 |
Q |
| |
|
|||||||| |
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| T |
48449496 |
caaaaact |
48449489 |
T |
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