View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19993_low_11 (Length: 397)
Name: NF19993_low_11
Description: NF19993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19993_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 19 - 387
Target Start/End: Original strand, 39955904 - 39956272
Alignment:
| Q |
19 |
ctttagacctcggcgatggatgcaaataaaatcgtctctctttgatagctttctcttcttcttctatgtttatttcatttatcacagatccttgtttctt |
118 |
Q |
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| T |
39955904 |
ctttagacctcggtgatggatgcaaataaaatcgtctctctttgatagctttctcttcttcttctatgtttatttcatttatcacagatccttgtttctt |
39956003 |
T |
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| Q |
119 |
ttcatcttccataatagttaaccgagagaacaatgttgaaggtgtggtagggcttggaagaagactagaacttccactacctgatacaggacttgaagga |
218 |
Q |
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| T |
39956004 |
ttcatcttccataatagttaaccgagagaacaatgttgaaggtgtggtagggcttggaagaagactagaacttccactacctgatacaggacttgaagga |
39956103 |
T |
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| Q |
219 |
aagctagaatttcttgacttagaagaaggtgatgcacctggttgtttgtgatattgtaaatttggtttaacaatctcaagttttggcttcatgcatttcc |
318 |
Q |
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| T |
39956104 |
aagctagaatttcttgacttagaggaaggtgatgcacctggttgtttgtgatattgtaaatttggtttaacaatctcaagttttggcttcatgcatttcc |
39956203 |
T |
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| Q |
319 |
ttctttcatggagttttggtggtgttctctttgcaatcggtgcaacctttgcagtttgctcttcctttg |
387 |
Q |
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| T |
39956204 |
ttctttcatggagttttggtggtgttctctttgtaatcggtgcaacctttgcagtttgctcttcctttg |
39956272 |
T |
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