View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19993_low_14 (Length: 372)
Name: NF19993_low_14
Description: NF19993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19993_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 38048438 - 38048603
Alignment:
| Q |
189 |
gttgcaaggaggttgaaagaatttcttcatataccttaatacaagcatgtacagaatgaaacgtagaccaaggggcatggttaaaaacatgttcattacg |
288 |
Q |
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| T |
38048438 |
gttgcaaggaggttgaaagaatttcttcatataccttaatacaagcatgtacagaatgaaacgtagaccaaggggcatggttaaaaacatgttcattacg |
38048537 |
T |
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| Q |
289 |
acatctttaaatactattaatggcaacaacaaagatcacaactgaaactctaagaacagaaggttg |
354 |
Q |
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| T |
38048538 |
acatctttaaatactattaatggcaacaacaaagatcacaactgaaactctaagaacagaaggttg |
38048603 |
T |
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