View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19993_low_28 (Length: 262)
Name: NF19993_low_28
Description: NF19993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19993_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 38109794 - 38110043
Alignment:
| Q |
1 |
gatagatataaatacgtatttcatactactttcgtccttaaatataaaacttactccatgtatactaccaccaaagtaatattaaatttgtcgataatca |
100 |
Q |
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| T |
38109794 |
gatagatataaatacgtatttcatactactttcatccttaaatataaaacttactccatgtatactaccaccaaagtaatattaaatttgtcgataatca |
38109893 |
T |
|
| Q |
101 |
atgttatgttacatgtttactcttaagatagaaagagagaattaatttatatttccattgcaacatttgttacaagttgtagaaaaatataatcatgtta |
200 |
Q |
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| T |
38109894 |
atgttatgttacgtgtttactcttaagatagaaagagagaattaatttatatttccattgcaacatttgtcacaagttgtagaaaaatataatcatgtta |
38109993 |
T |
|
| Q |
201 |
gaaataatgaattcatt------taaaaatttgaatgtggacttgtaaat |
244 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
38109994 |
gaaataatgaattcatttaaaaataaaaatttgaatgtggacttgtaaat |
38110043 |
T |
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