View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19995_low_1 (Length: 471)
Name: NF19995_low_1
Description: NF19995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19995_low_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 455; Significance: 0; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 459
Target Start/End: Original strand, 7541646 - 7542104
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7541646 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
7541745 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7541746 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
7541845 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7541846 |
actttggagcgttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
7541945 |
T |
|
| Q |
301 |
tccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7541946 |
tccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagca |
7542045 |
T |
|
| Q |
401 |
tcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatattcatctc |
459 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7542046 |
tcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatattcatctc |
7542104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 456
Target Start/End: Original strand, 14702828 - 14703283
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
||||| |||||| || ||||||||||||| ||||||||||||||||| | ||| | || | ||| |||||| ||||||| | ||| || |||| |
|
|
| T |
14702828 |
accaatcaaattattgtcactggctcttgttctctcaccctcataaatctcaatcaagtcataagattgattatctctagttgtgatatatcgttttgtc |
14702927 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
|| |||||||||||||||||||||| |||||||||||||||||| ||| |||| | | | |||| || |||||||||||||||| |||||| ||||||| |
|
|
| T |
14702928 |
tttttgacaggaatgcaagtgttcctaggaatcaccacatccatgatacctccgaataattccctacctagagacaaaggtgtaatatcctgaagcacca |
14703027 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
300 |
Q |
| |
|
|||| ||| | ||||| ||| || |||||||||| || ||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| |
|
|
| T |
14703028 |
acttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcacaactcctt |
14703127 |
T |
|
| Q |
301 |
tccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagca |
400 |
Q |
| |
|
|| | ||||||||||| ||||| || |||||| ||||||||| |||||||| |||||||| ||||||||||||| | ||||||||||| |||||| |
|
|
| T |
14703128 |
cccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatctactctactcttgtccatcttagca |
14703227 |
T |
|
| Q |
401 |
tcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatattcat |
456 |
Q |
| |
|
||||||||||| || |||||||| ||| |||||| ||||||| ||||||||||| |
|
|
| T |
14703228 |
tcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcat |
14703283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 104 - 411
Target Start/End: Complemental strand, 12259226 - 12258919
Alignment:
| Q |
104 |
ttgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcaccaact |
203 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12259226 |
ttgacaggaatgcaagtgttcctaggaatcaccacatccatgatatctcctactaaagacctaccaagagacaaaggtgtaacatcctgcagctccaact |
12259127 |
T |
|
| Q |
204 |
ttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttcc |
303 |
Q |
| |
|
||||| | |||| | || |||| ||||| || ||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||| || || || |
|
|
| T |
12259126 |
ttggaacattctggatatcttcacttaacaaagcagcctgaatagccgccccaaaagctacagcctcatcaggattaatgctcttgcacaactctttccc |
12259027 |
T |
|
| Q |
304 |
attgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatca |
403 |
Q |
| |
|
|||||||| |||| ||||||||| || ||| || ||||||| |||||||| || ||||||||||||||||||| | ||||||||| | |||||||| |
|
|
| T |
12259026 |
cttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaaggacaacatcatctacattactcttgtccgtgttagcatcc |
12258927 |
T |
|
| Q |
404 |
ataagaca |
411 |
Q |
| |
|
||||||| |
|
|
| T |
12258926 |
gtaagaca |
12258919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 407
Target Start/End: Complemental strand, 12246154 - 12245748
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||| || | | ||||||||||| | ||| | ||| || ||| |
|
|
| T |
12246154 |
accaagcaaattgttgtcactggcttttgttctctcaccctcgtaaaccttaatcaaggaactggattggttatcttcaactgtaaaatattctcgtgtc |
12246055 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
|| || ||||||||||||||||||| |||||||||||| ||| | ||| ||||| | | ||| |||| |||||||| ||||||||||||| ||||| |
|
|
| T |
12246054 |
ttcttcacaggaatgcaagtgttccttggaatcaccacactcatgacatcccctattattgacctaccaatggacaaaggagtaacatcctgcaacacca |
12245955 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
300 |
Q |
| |
|
| |||||| | |||||||| || ||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
12245954 |
aatttggaacattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattcctt |
12245855 |
T |
|
| Q |
301 |
tccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagca |
400 |
Q |
| |
|
|| ||||||||||||| ||||||||| || ||| |||||||||| ||||| || || ||||| |||| ||||||||| | ||||||||||| || ||| |
|
|
| T |
12245854 |
cccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatcatctatagtactcttgtccatctttgca |
12245755 |
T |
|
| Q |
401 |
tcaataa |
407 |
Q |
| |
|
|| |||| |
|
|
| T |
12245754 |
tccataa |
12245748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 111 - 407
Target Start/End: Original strand, 11998939 - 11999233
Alignment:
| Q |
111 |
gaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcaccaactttggagc |
210 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||| ||| | ||| | ||| || | |||||||||||||| ||||||||||||| |||||| |||||| | |
|
|
| T |
11998939 |
gaatgcaagtgttcctaggaatcaccacactcatgataccacctcttacttcc-taccaagagacaaaggagtaacatcctgcaacaccaaatttggaac |
11999037 |
T |
|
| Q |
211 |
gttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaa |
310 |
Q |
| |
|
|||||||| || |||||||||| || || |||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| || |||||| |
|
|
| T |
11999038 |
attcttaacatcttcactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaa |
11999137 |
T |
|
| Q |
311 |
aagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataa |
407 |
Q |
| |
|
||||| | ||||||||| || ||| |||| ||||| ||||| || || ||||| |||||||||||||| | ||||||||||| || ||||| |||| |
|
|
| T |
11999138 |
aagtcatgtaatagctgttggactttggg-atcctagaagatccaccaacaagtacaacatcatctatagtactcttgtccatctttgcatccataa |
11999233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 240 - 456
Target Start/End: Original strand, 12234349 - 12234564
Alignment:
| Q |
240 |
cctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatggg |
339 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| ||||| ||||| |||||||||| ||||| || |||||||| |||| ||||| || || ||| |||| |
|
|
| T |
12234349 |
cctgaacagctgcctcataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttggg |
12234447 |
T |
|
| Q |
340 |
aatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcatacactcgtta |
439 |
Q |
| |
|
|||||| || |||||||| | ||||||||| ||||| | | | || |||||||| ||||||||| ||||||| || |||||||| |||||||||| || |
|
|
| T |
12234448 |
aatcctagaggacccgccaataaggacaacttcatccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaata |
12234547 |
T |
|
| Q |
440 |
aaaagatccatattcat |
456 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
12234548 |
agaagatccatattcat |
12234564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 314
Target Start/End: Complemental strand, 16662574 - 16662427
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| ||||| || ||||| || |||||||||| |||||| | | ||||| |||| ||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
16662574 |
ccaagtgacaatggggtaacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacag |
16662475 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagt |
314 |
Q |
| |
|
|||||||||| || |||||||||||||| ||||| |||||||| |||| |
|
|
| T |
16662474 |
cctcatcagggttgatgctcttgcacaactccttcccattgaagaagt |
16662427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 167 - 453
Target Start/End: Original strand, 43624998 - 43625284
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||| |||||| | ||||||| |||| |||||| | || ||||| |||||||| ||||||||||||| |
|
|
| T |
43624998 |
ccaagtgacaaaggggtaacatctcgcagcaccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacag |
43625097 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
|||||||||| || ||||| | ||| | ||||| || |||||||| |||| || ||||| | |||| | ||||| || || || ||||| |||||||| |
|
|
| T |
43625098 |
cctcatcagggtttatgctttcgcatgattccttccccttgaaaaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggac |
43625197 |
T |
|
| Q |
367 |
aacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatatt |
453 |
Q |
| |
|
|||||| | || |||||||||| || |||||||||||||| || |||| | ||| ||||||||| |||||||||||||| |
|
|
| T |
43625198 |
aacatcgtggatagcactcttgtccaacttggcatcaataagacaactcttaacagttttcaaacactcgttgaaaagatccatatt |
43625284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 5446283 - 5446227
Alignment:
| Q |
235 |
tgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgca |
291 |
Q |
| |
|
|||||| |||||||| || |||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
5446283 |
tgctgcttgaacagcggcgccataagccacagcttcatcaggattaatgcttttgca |
5446227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 16658246 - 16658215
Alignment:
| Q |
23 |
gctcttgctctctcaccctcataaacattaat |
54 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
16658246 |
gctcttgctctctcaccctcataaacattaat |
16658215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 12259328 - 12259282
Alignment:
| Q |
2 |
ccaagcaaattgttatcactggctcttgctctctcaccctcataaac |
48 |
Q |
| |
|
|||||||||||||| |||| |||||||| |||||||||||| ||||| |
|
|
| T |
12259328 |
ccaagcaaattgttgtcacaggctcttgttctctcaccctcgtaaac |
12259282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 17717182 - 17717145
Alignment:
| Q |
254 |
ccataagcaacagcctcatcaggattaatgctcttgca |
291 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
17717182 |
ccatatgcaacagcctcatcgggattaatgctcttgca |
17717145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 17718446 - 17718409
Alignment:
| Q |
254 |
ccataagcaacagcctcatcaggattaatgctcttgca |
291 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
17718446 |
ccatatgcaacagcctcatcgggattaatgctcttgca |
17718409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 133; Significance: 6e-69; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 104 - 411
Target Start/End: Original strand, 35131979 - 35132287
Alignment:
| Q |
104 |
ttgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcaccaact |
203 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||| |||||||||| | | ||| |||||||||||||||||||||||||| | |||||||| |
|
|
| T |
35131979 |
ttgacaggaatgcaagtgttcctaggaatcaccacattcatgatatctcctactattgacctaccaagagacaaaggtgtaacatcctgtaacaccaact |
35132078 |
T |
|
| Q |
204 |
ttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttcc |
303 |
Q |
| |
|
||||| | || || | |||| ||||||||| || |||||||| |||||||||||||| ||||||||||| || ||||||||||||||||| ||||| || |
|
|
| T |
35132079 |
ttggaacattttttatgcctttactcaacaaagcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccc |
35132178 |
T |
|
| Q |
304 |
attgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatcta-tcatgctcttgtccatattagcatc |
402 |
Q |
| |
|
|||||||||| | |||||||| || ||| |||||||||| |||||||| || ||||| ||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
35132179 |
tttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatc |
35132278 |
T |
|
| Q |
403 |
aataagaca |
411 |
Q |
| |
|
||| ||||| |
|
|
| T |
35132279 |
aatgagaca |
35132287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 30774838 - 30774980
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| |||||||| || ||||| |||||||||||||||| || ||||||| |||| ||||||| | || ||||| ||||||||||| | |||||| | |
|
|
| T |
30774838 |
ccaagtgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactg |
30774937 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaa |
309 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
30774938 |
cctcatcaggattgatgctcttgcacaaatccttcccattgaa |
30774980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 273
Target Start/End: Complemental strand, 9336473 - 9336367
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| ||||| || |||||||| | |||||||| || || || ||||||| |||| ||||||| | || || ||||||||||| ||||||||||||| |
|
|
| T |
9336473 |
ccaagtgacaatggggtaacatctcgtagcaccaagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacag |
9336374 |
T |
|
| Q |
267 |
cctcatc |
273 |
Q |
| |
|
||||||| |
|
|
| T |
9336373 |
cctcatc |
9336367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 30774695 - 30774726
Alignment:
| Q |
24 |
ctcttgctctctcaccctcataaacattaata |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
30774695 |
ctcttgctctctcaccctcataaacattaata |
30774726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 54396078 - 54396133
Alignment:
| Q |
236 |
gctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgca |
291 |
Q |
| |
|
||||| |||||||| || |||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
54396078 |
gctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgca |
54396133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 5 - 300
Target Start/End: Complemental strand, 52549674 - 52549395
Alignment:
| Q |
5 |
agcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgttttat |
104 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||||||||| |||| || | | ||||||||||||| ||||||| ||||| | ||||||||| |
|
|
| T |
52549674 |
agcaaattgttatcactggctcttgttctctcacccccataaacatgaatagaggaaatggtttggttatctttggttgttatataggcttttgttttat |
52549575 |
T |
|
| Q |
105 |
tgacaggaatgcaa-gtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcaccaact |
203 |
Q |
| |
|
||||||| |||||| ||||| | |||| || |||||||||| | || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
52549574 |
tgacagggatgcaaagtgtttc-----------------attaaatttcctatcacttcaatgacaagagacaaaggtgtaacatcctgcagcaccaact |
52549492 |
T |
|
| Q |
204 |
ttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
300 |
Q |
| |
|
||||| | |||| || |||| ||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
52549491 |
ttggaacattctgaatgccttcactcaacaatgcagcctgaacagctgcgccataagctacaacctcatcaggattaatgcccttgcacaactcctt |
52549395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 15594455 - 15594896
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||||||||| | ||| || || | ||||||||| | | |||| ||| || ||||| |
|
|
| T |
15594455 |
accaagcaaattattgtcactagctcttgctctctcaccctcataaacctgaattttcacattggcttggttatcctcatctgttttataaagttttgtt |
15594554 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
|| ||||||||||||| |||||||| | ||||| ||||||| ||||||||| | | | |||||||||||||||| |||||| || | ||||| |
|
|
| T |
15594555 |
ttcttgacaggaatgctagtgttcctattaatcataacatccag-atatctcctttaagtgagacaccaagagacaaaggtgcaacatcttgtatcacca |
15594653 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
300 |
Q |
| |
|
| |||||| | || |||| ||| |||||||||| || ||||| |||||||| ||||||||||||||||||||||| || |||||| ||||||| ||||| |
|
|
| T |
15594654 |
agtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctt |
15594753 |
T |
|
| Q |
301 |
tccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagca |
400 |
Q |
| |
|
||| | |||||| ||||| ||||| || || ||| |||||||||| |||||||| || |||| ||||| ||||| || | ||||| | ||| |||||| |
|
|
| T |
15594754 |
tccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagca |
15594853 |
T |
|
| Q |
401 |
tcaataagacagcttccaacaatcgtcatacactcgttaaaaa |
443 |
Q |
| |
|
||| |||||| || |||| ||| ||||||| || ||||||| |
|
|
| T |
15594854 |
tcatcaagacaactctcaactatcttcatacaatccttaaaaa |
15594896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 173 - 429
Target Start/End: Complemental strand, 34467364 - 34467108
Alignment:
| Q |
173 |
gacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcat |
272 |
Q |
| |
|
||||| ||||||||||| |||||||||| |||||| | || |||| |||| ||||||||| || || || |||||||| ||||||| |||||||||| |
|
|
| T |
34467364 |
gacaatggtgtaacatctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcat |
34467265 |
T |
|
| Q |
273 |
caggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatc |
372 |
Q |
| |
|
|||| || ||||| ||||| | ||||| ||||||||||||||| |||||||| || ||| |||||||||| ||||| || |||||||||||| |||| |
|
|
| T |
34467264 |
cagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatc |
34467165 |
T |
|
| Q |
373 |
atctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcat |
429 |
Q |
| |
|
|| | | ||| ||||||| |||||||||| |||||| || |||||||| |||| |
|
|
| T |
34467164 |
atgcacactactcgtgtccatcttagcatcaacaagacaactcacaacaatcctcat |
34467108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 375
Target Start/End: Complemental strand, 4679059 - 4678931
Alignment:
| Q |
247 |
agctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctc |
346 |
Q |
| |
|
|||||| |||||||||||||||||||| || || || ||||||||||| ||||| | || |||||||| | ||||| | || ||| ||||||||||| |
|
|
| T |
4679059 |
agctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctc |
4678960 |
T |
|
| Q |
347 |
gaagacccgccgacaaggacaacatcatc |
375 |
Q |
| |
|
|| || || || ||||| ||||||||||| |
|
|
| T |
4678959 |
gatgaaccacccacaagaacaacatcatc |
4678931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4679302 - 4679248
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaata |
55 |
Q |
| |
|
|||||||| |||||| || | |||||||||||||||||||||||||| |||||| |
|
|
| T |
4679302 |
accaagcagattgttgtctgttgctcttgctctctcaccctcataaaccttaata |
4679248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 52549353 - 52549305
Alignment:
| Q |
408 |
gacagcttccaacaatcgtcatacactcgttaaaaagatccatattcat |
456 |
Q |
| |
|
|||| ||| |||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
52549353 |
gacaactttcaacaatcttcatacactccttaaaaaggtccatattcat |
52549305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 101; Significance: 7e-50; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 117 - 453
Target Start/End: Original strand, 6789048 - 6789384
Alignment:
| Q |
117 |
aagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttctt |
216 |
Q |
| |
|
||||||||| ||||||||||||| ||| | || |||||| ||| || | ||||||||||| ||||||||||| ||||||||||| |||||| | |||| |
|
|
| T |
6789048 |
aagtgttcctaggaatcaccacactcatgacatttcctattactgccttaccaagagacaacggtgtaacatcttgcagcaccaagtttggaacactctt |
6789147 |
T |
|
| Q |
217 |
aacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcc |
316 |
Q |
| |
|
| |||| | |||||||| || ||||| |||||||| || |||||||||||||||||||| || |||||| ||||||| |||||||| |||||| || |
|
|
| T |
6789148 |
agagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttct |
6789247 |
T |
|
| Q |
317 |
tttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttc |
416 |
Q |
| |
|
| ||||| || || ||| ||||||| || |||||||| || |||||||||||||||| || || ||||||||||| ||||| |||| |||||| || |
|
|
| T |
6789248 |
tgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtccatcttagcgtcaacaagacaactct |
6789347 |
T |
|
| Q |
417 |
caacaatcgtcatacactcgttaaaaagatccatatt |
453 |
Q |
| |
|
|||| || |||||||||| ||||||| ||||||||| |
|
|
| T |
6789348 |
caacggtcttcatacactcattaaaaatatccatatt |
6789384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 225 - 398
Target Start/End: Complemental strand, 27831399 - 27831226
Alignment:
| Q |
225 |
cactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatag |
324 |
Q |
| |
|
|||||||||| || ||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||| |
|
|
| T |
27831399 |
cactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatag |
27831300 |
T |
|
| Q |
325 |
ctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattag |
398 |
Q |
| |
|
||| || ||| |||||||||| ||||| || || |||||||||||||||||||| | ||||||||||| |||| |
|
|
| T |
27831299 |
ctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatcttag |
27831226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 453
Target Start/End: Original strand, 17259856 - 17260113
Alignment:
| Q |
196 |
caccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaag |
295 |
Q |
| |
|
|||||| |||||| | ||||| |||| |||||| ||||| || ||||||||||| || ||||||||||||||||||||||| || ||||||||||| || |
|
|
| T |
17259856 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataat |
17259955 |
T |
|
| Q |
296 |
tcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatat |
395 |
Q |
| |
|
||||| || ||||| || |||| ||||| || || ||| | |||||||| ||||| || || ||||||||||||||||| || |||||||||| || | |
|
|
| T |
17259956 |
tccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatct |
17260055 |
T |
|
| Q |
396 |
tagcatcaataagacagcttc-caacaatcgtcatacactcgttaaaaagatccatatt |
453 |
Q |
| |
|
|| ||||| ||||||| |||| |||||||| ||| ||||| | |||||| |||||||| |
|
|
| T |
17260056 |
taccatcactaagaca-cttctcaacaatctccatgcactcataaaaaaggtccatatt |
17260113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 167 - 411
Target Start/End: Original strand, 8545219 - 8545463
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| |||||||| |||||||| | ||||||| ||||| | |||||| | || |||||| ||| || ||||| |||||||| ||||||||||||| |
|
|
| T |
8545219 |
ccaagtgacaaaggggtaacatctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaacag |
8545318 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||| || || ||||| |||| ||||||||| ||| | |||||||| ||||| ||||| |||||||| |
|
|
| T |
8545319 |
cctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccgccaacaaggac |
8545418 |
T |
|
| Q |
367 |
aacatcatctatcatgctcttgtccatattagcatcaataagaca |
411 |
Q |
| |
|
||||||||||| | | ||||||||| |||||||||| |||||| |
|
|
| T |
8545419 |
aacatcatctacactacccttgtccatcttagcatcaacaagaca |
8545463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 196 - 453
Target Start/End: Original strand, 17267554 - 17267811
Alignment:
| Q |
196 |
caccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaag |
295 |
Q |
| |
|
|||||| |||||| | ||||| |||| |||||| ||||| || ||||||||||| || ||||||||||||||||||||||| || || || ||||| || |
|
|
| T |
17267554 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataat |
17267653 |
T |
|
| Q |
296 |
tcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatat |
395 |
Q |
| |
|
||||| || ||||| |||| || ||||| || || ||| | |||||||| |||||||| || ||||||||||||||||| | |||||||||| || | |
|
|
| T |
17267654 |
tccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatct |
17267753 |
T |
|
| Q |
396 |
tagcatcaataagacagcttc-caacaatcgtcatacactcgttaaaaagatccatatt |
453 |
Q |
| |
|
|||||||| ||||||| |||| |||||||| ||| ||||| | |||||| |||||||| |
|
|
| T |
17267754 |
tagcatcactaagaca-cttctcaacaatctccatgcactcatcaaaaaggtccatatt |
17267811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 167 - 377
Target Start/End: Original strand, 8609503 - 8609713
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||| |||||| | || | |||| ||| |||||| || ||||| ||||| || ||||||||||| | |
|
|
| T |
8609503 |
ccaagtgacaaaggtgtaacatctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaaccg |
8609602 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
|||||||||| || |||||| | ||||| |||||||||||||||||||| | | |||||| | ||| | |||||||| ||||| || || ||||| || |
|
|
| T |
8609603 |
cctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaagaac |
8609702 |
T |
|
| Q |
367 |
aacatcatcta |
377 |
Q |
| |
|
||||||||||| |
|
|
| T |
8609703 |
aacatcatcta |
8609713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 453
Target Start/End: Original strand, 8616329 - 8616553
Alignment:
| Q |
229 |
caacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctga |
328 |
Q |
| |
|
|||||| || |||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||| ||||| |||| ||||||||| | ||||| | |
|
|
| T |
8616329 |
caacaaagcagcctgaactgctgccccactagcaacagcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcc |
8616428 |
T |
|
| Q |
329 |
tgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtca |
428 |
Q |
| |
|
|| ||| | |||||||| || || || |||||||| |||| |||||||| | ||||| || || |||| |||| ||| ||| || ||||| || | | |
|
|
| T |
8616429 |
tgcactttaggaatcctagacgagccaccgacaagaacaatatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtcttta |
8616528 |
T |
|
| Q |
429 |
tacactcgttaaaaagatccatatt |
453 |
Q |
| |
|
|||||||||||||||| |||||||| |
|
|
| T |
8616529 |
tacactcgttaaaaaggtccatatt |
8616553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 403
Target Start/End: Original strand, 8575918 - 8576148
Alignment:
| Q |
173 |
gacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcat |
272 |
Q |
| |
|
||||| ||||||||||| | | |||||| |||||| | |||||| |||| |||||||||| || || || ||| | || ||||||||||||||||||| |
|
|
| T |
8575918 |
gacaacggtgtaacatctcgtaacaccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcat |
8576017 |
T |
|
| Q |
273 |
caggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatc |
372 |
Q |
| |
|
|||| || |||||||| || || ||||| || ||||||| |||| ||||||||| ||| | |||||||| ||||| || || |||||||||||||| |
|
|
| T |
8576018 |
cagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaaggacaacatc |
8576117 |
T |
|
| Q |
373 |
atctatcatgctcttgtccatattagcatca |
403 |
Q |
| |
|
||||| | |||||||||| ||||||||| |
|
|
| T |
8576118 |
atctacactattcttgtccatcttagcatca |
8576148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 377
Target Start/End: Original strand, 8581286 - 8581496
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| ||||| ||||||||||| ||| | ||| |||||| | |||||| |||| |||| | ||| || ||||||| ||| || ||||||||||||| |
|
|
| T |
8581286 |
ccaagtgacaatggtgtaacatctcgcaaaatcaagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaacag |
8581385 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
|||||||||| || ||||||||||| || ||||| || | |||||| |||| ||||||||| ||| | |||||||| ||||| || || |||||||| |
|
|
| T |
8581386 |
cctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaaggac |
8581485 |
T |
|
| Q |
367 |
aacatcatcta |
377 |
Q |
| |
|
||||||||||| |
|
|
| T |
8581486 |
aacatcatcta |
8581496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 401
Target Start/End: Original strand, 8590224 - 8590458
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||||||||| || |||||||| || |||||||| || ||| | ||||||| || ||| | ||| || || ||||||||||| ||||||||||||| |
|
|
| T |
8590224 |
ccaagagacaatggagtaacatcttgtagcaccaaattaggaacattcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaacag |
8590323 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
||||||| ||||| ||||| ||| | | ||||| || | |||||||| | |||||||| || ||| |||||||||| ||||| || || ||||| || |
|
|
| T |
8590324 |
cctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtac |
8590423 |
T |
|
| Q |
367 |
aacatcatctatcatgctcttgtccatattagcat |
401 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||| |
|
|
| T |
8590424 |
aacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 239 - 424
Target Start/End: Complemental strand, 29582351 - 29582166
Alignment:
| Q |
239 |
gcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgg |
338 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||| || |||||| ||||||| ||||| || |||||||| || | ||||||||||| ||| ||| |
|
|
| T |
29582351 |
gcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgg |
29582252 |
T |
|
| Q |
339 |
gaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatc |
424 |
Q |
| |
|
|||| || ||||| || || | |||||| | |||||||| | |||||| |||| ||||||||| ||||| || ||||||||| |
|
|
| T |
29582251 |
gaattctagaagagccaccaataaggacgatatcatctacactactcttgaccatgttagcatcacgtagacaactcccaacaatc |
29582166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 3146684 - 3146968
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||||||||||||||||||| || || | | || || ||||||| ||| ||| ||| | ||||| |
|
|
| T |
3146684 |
accaagcagattgttgtcactagctcttgctctctcaccctcataaactttgatgaggactgaagttaggttatcactagccgttgaataaccttttgtt |
3146783 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
|| |||| |||||||| |||||| | || ||| || ||| |||| ||||| ||||| ||| | | |||||||||||||| | |||||| |||| ||||| |
|
|
| T |
3146784 |
ttcttgataggaatgctagtgtttctagcaattacgacacccatgatatcacctataacttcgataccaagagacaaaggagcaacatcttgcaccacca |
3146883 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgct |
285 |
Q |
| |
|
| |||||| | || |||| | || |||||||||| || || || |||||||| ||||||||||| ||||||||||| || ||||| |
|
|
| T |
3146884 |
agtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgct |
3146968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 8646297 - 8646614
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtct-tgt |
99 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||| | ||| ||||||||||| ||||| ||| ||||| ||| |
|
|
| T |
8646297 |
accaagcagattgttgtcacttgctcttgctctctcaccctcataaacaataataacagaagaatcttggttatcttccgttgtcttata-ggtctgtgt |
8646395 |
T |
|
| Q |
100 |
tttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacc |
199 |
Q |
| |
|
||| ||||| |||| | | |||||| ||||||||| ||| ||| | ||||||| | | | || ||| |||||||| || || ||||| || | |||| |
|
|
| T |
8646396 |
tttcttgacgggaacggacgtgttcttaggaatcacaacagtcatcagatctccttttattgccaggcctagagacaatggggtgacatcttgaaacacc |
8646495 |
T |
|
| Q |
200 |
aactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcct |
299 |
Q |
| |
|
|| |||||||| ||||||| ||| ||| || || || |||||||| ||||| ||||||||||| ||| ||||||| || ||||||| ||| || |||| |
|
|
| T |
8646496 |
aagtttggagcattcttaaagccatcacataataaagcagcctgaacggctgcgccataagcaacggccacatcagggttgatgctctcgcataattcct |
8646595 |
T |
|
| Q |
300 |
ttccattgaaaaagtcctt |
318 |
Q |
| |
|
| |||||||||| ||||| |
|
|
| T |
8646596 |
tctcattgaaaaactcctt |
8646614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 396
Target Start/End: Complemental strand, 8636863 - 8636696
Alignment:
| Q |
229 |
caacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctga |
328 |
Q |
| |
|
||||||||| ||||| || ||||| |||||||||||||||||||||| || |||||||| |||| ||||| | || |||| ||||| |||||| || |
|
|
| T |
8636863 |
caacaatgcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgc |
8636764 |
T |
|
| Q |
329 |
tgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatatt |
396 |
Q |
| |
|
|| || | |||||||| || || || || |||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
8636763 |
tgcacctttggaatcctagaggagccaccaacaaggacaacatcatctatattgctcttatccatatt |
8636696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 411
Target Start/End: Complemental strand, 7878317 - 7878071
Alignment:
| Q |
165 |
tgccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaac |
264 |
Q |
| |
|
||||||||||||| || |||||||| |||| |||||| || ||| | ||||||| || ||| | || || |||||||||||||| ||||||||||| |
|
|
| T |
7878317 |
tgccaagagacaatggagtaacatcttgcaacaccaaattaggaacattcttaataccatcacaaagcagagcagcctgaacagctgcaccataagcaac |
7878218 |
T |
|
| Q |
265 |
agcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaagg |
364 |
Q |
| |
|
||| ||||| || || ||||| |||| | ||||| || || |||||||||| |||||||| || ||| || ||||||| || || || || ||||| |
|
|
| T |
7878217 |
agcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagt |
7878118 |
T |
|
| Q |
365 |
acaacatcatctatcatgctcttgtccatattagcatcaataagaca |
411 |
Q |
| |
|
||||||||||||| || |||||||||| |||||||| ||||||| |
|
|
| T |
7878117 |
acaacatcatctacattgttcttgtccatcatagcatcagtaagaca |
7878071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 414
Target Start/End: Complemental strand, 8383377 - 8383211
Alignment:
| Q |
248 |
gctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcg |
347 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| |||||| || | |||||| | ||||||||||| | ||||||| || ||| |||||||||||| |
|
|
| T |
8383377 |
gctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcactttgggaatcctcg |
8383278 |
T |
|
| Q |
348 |
aagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagct |
414 |
Q |
| |
|
|||| || |||| || ||||||||||||| | ||||||| ||| ||||||||| |||||||||| |
|
|
| T |
8383277 |
aagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagct |
8383211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 377
Target Start/End: Original strand, 8569969 - 8570107
Alignment:
| Q |
239 |
gcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgg |
338 |
Q |
| |
|
||||||| |||||| || |||||||||||||||||||| |||||||| ||||| || ||||| || | |||||| || | ||||||||| ||| | | |
|
|
| T |
8569969 |
gcctgaatagctgcaccgtaagcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttag |
8570068 |
T |
|
| Q |
339 |
gaatcctcgaagacccgccgacaaggacaacatcatcta |
377 |
Q |
| |
|
||||||| ||||| || || ||||||||||||||||||| |
|
|
| T |
8570069 |
gaatcctagaagaaccaccaacaaggacaacatcatcta |
8570107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 285
Target Start/End: Original strand, 8537559 - 8537740
Alignment:
| Q |
104 |
ttgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcaccaact |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| | |||||| |||||||| | ||| | |||||||||| |||| ||||||| |||||||||| | |
|
|
| T |
8537559 |
ttgacaggaatggaagtgttccttggaatcagtatatccatgatatctccactaactgaggtaccaagagacagaggtataacatctcgcagcaccaagt |
8537658 |
T |
|
| Q |
204 |
ttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgct |
285 |
Q |
| |
|
| ||| | |||||| |||||| |||||||| || ||||| ||||| || |||||||||||||| |||||||| || ||||| |
|
|
| T |
8537659 |
tcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct |
8537740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 29578254 - 29578106
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| ||||| ||||||| ||| ||| ||||| |||||| | ||||||| ||| || ||||||| || ||||| |||||||| ||||||||||||| |
|
|
| T |
29578254 |
ccaagcgacaagggtgtaatatctcgcaagaccaaatttggaacattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaacag |
29578155 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtc |
315 |
Q |
| |
|
|||| ||||| || |||||| ||||||| ||| | || ||||||||||| |
|
|
| T |
29578154 |
cctcgtcagggtttatgctcatgcacaaatccctacccttgaaaaagtc |
29578106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 377
Target Start/End: Complemental strand, 8586288 - 8586078
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||| |||| ||| |||||||| |||||||||| |||||| | ||||||| | || || || ||| | |||||||| || |||||| |||||||| |
|
|
| T |
8586288 |
ccaagtgacagaggggtaacatctcgcagcaccaagtttggaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaacag |
8586189 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
||||||||||||| ||| ||||||| || || || |||||||| ||||| | ||||| | |||||| ||||||| || || || || ||||||||||| |
|
|
| T |
8586188 |
cctcatcaggattgatgttcttgcataaatctttcccattgaagaagtcactcaatagttcctgtactttgggaattctggacgagccaccgacaaggac |
8586089 |
T |
|
| Q |
367 |
aacatcatcta |
377 |
Q |
| |
|
|| ||| |||| |
|
|
| T |
8586088 |
aatatcgtcta |
8586078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 273
Target Start/End: Complemental strand, 10495022 - 10494850
Alignment:
| Q |
104 |
ttgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcc---tatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
|||||||| ||| ||||||||| |||||||||||||||||| |||||| | | | ||| | | ||||| ||||| || |||||||| | ||||||| |
|
|
| T |
10495022 |
ttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcacca |
10494923 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatc |
273 |
Q |
| |
|
| || || | ||||||| |||| ||||||| | || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
10494922 |
agttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatc |
10494850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 27846630 - 27846551
Alignment:
| Q |
225 |
cactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttcca |
304 |
Q |
| |
|
|||||||||| || ||||| |||||||| ||| ||||||||||||||||||| || ||||||||| ||| ||||||||| |
|
|
| T |
27846630 |
cactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgctcttgtacatatcctttcca |
27846551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 8586453 - 8586375
Alignment:
| Q |
2 |
ccaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttag |
80 |
Q |
| |
|
||||||| |||||| ||||| |||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||| |
|
|
| T |
8586453 |
ccaagcagattgttgtcactagctcttgctctctcaccctcataaaccttaattcgggctgaggattggttatctttag |
8586375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 375
Target Start/End: Original strand, 8601635 - 8601768
Alignment:
| Q |
242 |
tgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaa |
341 |
Q |
| |
|
||||| ||||| ||||| ||||| |||||||||||||| |||||| ||| | |||||| | ||||||||| || || | || || || ||| |||||| |
|
|
| T |
8601635 |
tgaactgctgcgccataggcaactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcactttgggaa |
8601734 |
T |
|
| Q |
342 |
tcctcgaagacccgccgacaaggacaacatcatc |
375 |
Q |
| |
|
|||| ||||| ||||| ||||||||| ||||||| |
|
|
| T |
8601735 |
tcctagaagaaccgccaacaaggacagcatcatc |
8601768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 39985304 - 39985356
Alignment:
| Q |
239 |
gcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgca |
291 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
39985304 |
gcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgca |
39985356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 13333904 - 13333844
Alignment:
| Q |
213 |
tcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatc |
273 |
Q |
| |
|
|||||| |||| ||||||| | || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
13333904 |
tcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatc |
13333844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 6788936 - 6788979
Alignment:
| Q |
5 |
agcaaattgttatcactggctcttgctctctcaccctcataaac |
48 |
Q |
| |
|
|||| |||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
6788936 |
agcagattgttatcactggctcttggtctttcaccctcataaac |
6788979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8653864 - 8653918
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaata |
55 |
Q |
| |
|
|||||||| ||| || ||||| ||||||| ||||||||||||||||||| ||||| |
|
|
| T |
8653864 |
accaagcagattattgtcactagctcttggtctctcaccctcataaacaataata |
8653918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 8616136 - 8616181
Alignment:
| Q |
2 |
ccaagcaaattgttatcactggctcttgctctctcaccctcataaa |
47 |
Q |
| |
|
||||||| |||||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
8616136 |
ccaagcagattgttgtcactagctcttgatctctcaccctcataaa |
8616181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 8653964 - 8654009
Alignment:
| Q |
104 |
ttgacaggaatgcaagtgttccgaggaatcaccacatccattatat |
149 |
Q |
| |
|
|||||||| ||| ||||||||| |||||||||||||||||| |||| |
|
|
| T |
8653964 |
ttgacagggatggaagtgttcctaggaatcaccacatccatgatat |
8654009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29582588 - 29582539
Alignment:
| Q |
5 |
agcaaattgttatcactggctcttgctctctcaccctcataaacattaat |
54 |
Q |
| |
|
||||| ||||| ||||||||| || |||||||||||||||||||||||| |
|
|
| T |
29582588 |
agcaagttgttctcactggcttttattctctcaccctcataaacattaat |
29582539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 402
Target Start/End: Original strand, 8102328 - 8102488
Alignment:
| Q |
242 |
tgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaa |
341 |
Q |
| |
|
|||||||| || ||||||||||||||||| || || || ||||| ||||| | ||||| |||||||| ||||| | || || || || ||| |||||| |
|
|
| T |
8102328 |
tgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttgctgaactttgggaa |
8102427 |
T |
|
| Q |
342 |
tcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatc |
402 |
Q |
| |
|
|||| | || || || ||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
8102428 |
tcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatc |
8102488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 28219338 - 28219637
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
|||||||| |||||| ||||| ||| |||||||||||||||||||||||| |||| || | | ||||||||| | | ||||| | | | ||||| |
|
|
| T |
28219338 |
accaagcagattgttgtcacttgcttttgctctctcaccctcataaacataaataccaacacaaacttggttatcgtaatctgttataaaaccttttgtt |
28219437 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
200 |
Q |
| |
|
| ||| |||||||| |||||||| |||||| | |||| ||| ||||| ||||||||| | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
28219438 |
atcttggtaggaatgctagtgttcctaggaattatcacactcatgatatcacctatcacttggataccaagagacaaaggtgtaacatcttgcagcacca |
28219537 |
T |
|
| Q |
201 |
actttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
300 |
Q |
| |
|
|||| ||| | || |||| |||| |||||||||| || ||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
28219538 |
acttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttaatgctcttacacaattcctt |
28219637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 43744236 - 43744688
Alignment:
| Q |
1 |
accaagcaaattgttatcactggctcttgctctctcaccctcataaacattaatattggcagagatttggttatctttagttgttacatagggtcttgtt |
100 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||| || ||||| || ||||| |
|
|
| T |
43744236 |
accaagcagattgttgtcacttgctcttgctctctcaccctcataaactttaatattagcagtagcttggttatctctaattgttgcacgtttgattgtt |
43744335 |
T |
|
| Q |
101 |
ttattgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcctatcactcccc-tgccaagagacaaaggtgtaacatcctgcagcacc |
199 |
Q |
| |
|
|| ||||| ||||||| |||||||| || ||| |||||| ||| ||||| |||| ||| | | |||||||| ||||||| |||||| ||||||||| |
|
|
| T |
43744336 |
ttcttgacgggaatgctagtgttcctagaaattaccacagtcatgatatcacctaa-actgtctataccaagagaaaaaggtgcaacatcttgcagcacc |
43744434 |
T |
|
| Q |
200 |
aactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcct |
299 |
Q |
| |
|
| |||||| | || |||| |||| |||||||||| || ||||| |||||||| ||| |||||| ||||||||||| |||||| |||| ||||| |||| |
|
|
| T |
43744435 |
acgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggttaatgttcttacacaaatcct |
43744534 |
T |
|
| Q |
300 |
ttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagc |
399 |
Q |
| |
|
| || ||||| |||| ||||| || |||||| | |||||||| || || || || ||||| |||||||||| ||| |||||||||||| || || |
|
|
| T |
43744535 |
tccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggc |
43744634 |
T |
|
| Q |
400 |
atcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatatt |
453 |
Q |
| |
|
|||| ||||||| || ||||||| ||| ||||||||| || ||||||||||| |
|
|
| T |
43744635 |
atcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatatt |
43744688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 167 - 402
Target Start/End: Original strand, 12528090 - 12528325
Alignment:
| Q |
167 |
ccaagagacaaaggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgctgcctgaacagctgccccataagcaacag |
266 |
Q |
| |
|
||||||||||||||| ||||||| |||||| || || ||| | |||| | |||| |||||||||| || ||||||||||| || ||||||||||||| |
|
|
| T |
12528090 |
ccaagagacaaaggtataacatcttgcagcgtcactttcggaacagtcttcatgccttcactcaacaaagcagcctgaacagcggcaccataagcaacag |
12528189 |
T |
|
| Q |
267 |
cctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggac |
366 |
Q |
| |
|
|||||||||| || ||||||||| | || ||||| || |||||||| |||| |||||||| | ||| |||||||||| || || || || ||||| || |
|
|
| T |
12528190 |
cctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtac |
12528289 |
T |
|
| Q |
367 |
aacatcatctatcatgctcttgtccatattagcatc |
402 |
Q |
| |
|
|| |||||||| | ||||||||||| |||||||| |
|
|
| T |
12528290 |
aatatcatctacactactcttgtccatcttagcatc |
12528325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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