View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19995_low_3 (Length: 371)
Name: NF19995_low_3
Description: NF19995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19995_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 17 - 356
Target Start/End: Original strand, 39169120 - 39169459
Alignment:
| Q |
17 |
ataattatacatttacctatgatatcaaatacattgtcaatttttagttgtttaaataacatttcttaatttttaacatggatagcttatgacaaggaca |
116 |
Q |
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| T |
39169120 |
ataattatacatttacctatgatatcaaatacattgtcaatttttagttgtttaaataacatttattaatttttaacatggatagcttatgtcaaggacg |
39169219 |
T |
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| Q |
117 |
ctaatatgaattgacactaataaagttattgttcataattgtatgaccaaagaagaatatcacacacattacttattacacaattacttattagaagcat |
216 |
Q |
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| T |
39169220 |
ctaatatgaattgacactaataaagttattgttcataattgtatgaccaaataagaatatcacacacattacttattacacaattacttattagaagcat |
39169319 |
T |
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| Q |
217 |
agattcatctcttgtaatcacttgaaatgtcaaatttatttgacaattaagcaattatgatatccggcaatagaatatattttcgtagtgagccacatca |
316 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
39169320 |
agattcatctcttgttatcacttgaaatgtcaaatttatttgacaattaagtaattatgatatccggcgatagaatatattttcgtagtgagccacatca |
39169419 |
T |
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| Q |
317 |
atggttgtttgttgacatatgaggatgtagagtttaaatt |
356 |
Q |
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| T |
39169420 |
atggttgtttgttgacatatgaggatgtagagtttaaatt |
39169459 |
T |
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