View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19996_high_4 (Length: 500)

Name: NF19996_high_4
Description: NF19996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19996_high_4
NF19996_high_4
[»] chr4 (68 HSPs)
chr4 (13-485)||(56373626-56374098)
chr4 (378-485)||(52957841-52957948)
chr4 (378-485)||(52848105-52848212)
chr4 (378-480)||(40345403-40345505)
chr4 (378-485)||(1819561-1819668)
chr4 (378-485)||(20448038-20448145)
chr4 (329-485)||(45043639-45043795)
chr4 (378-483)||(54042236-54042341)
chr4 (378-485)||(19878647-19878754)
chr4 (378-485)||(19930713-19930820)
chr4 (378-485)||(29519576-29519683)
chr4 (378-485)||(44571916-44572023)
chr4 (378-482)||(2493101-2493205)
chr4 (378-485)||(10573206-10573312)
chr4 (378-485)||(49080528-49080634)
chr4 (378-485)||(52253844-52253954)
chr4 (378-485)||(30261258-30261364)
chr4 (384-483)||(34316227-34316326)
chr4 (378-485)||(37654409-37654515)
chr4 (378-485)||(41920360-41920467)
chr4 (378-485)||(49089463-49089569)
chr4 (378-485)||(53814548-53814655)
chr4 (381-485)||(2728449-2728553)
chr4 (378-454)||(19451293-19451369)
chr4 (378-485)||(24940878-24940985)
chr4 (378-485)||(47817737-47817843)
chr4 (378-485)||(50623082-50623189)
chr4 (385-485)||(45839643-45839742)
chr4 (378-485)||(8971041-8971147)
chr4 (378-485)||(34413599-34413705)
chr4 (378-481)||(52915598-52915700)
chr4 (384-485)||(29370608-29370710)
chr4 (344-485)||(27653641-27653780)
chr4 (378-442)||(4505336-4505400)
chr4 (378-485)||(50203075-50203179)
chr4 (378-485)||(37624555-37624661)
chr4 (382-449)||(39982106-39982173)
chr4 (378-481)||(51733550-51733652)
chr4 (403-485)||(38991812-38991894)
chr4 (384-485)||(6991314-6991413)
chr4 (414-485)||(18430024-18430095)
chr4 (378-481)||(25231174-25231276)
chr4 (422-485)||(42605615-42605678)
chr4 (380-454)||(7906078-7906152)
chr4 (378-475)||(40837129-40837226)
chr4 (378-484)||(41496204-41496309)
chr4 (384-481)||(21864439-21864535)
chr4 (384-481)||(21920300-21920396)
chr4 (378-466)||(40010943-40011032)
chr4 (392-485)||(46392114-46392205)
chr4 (409-485)||(11364256-11364331)
chr4 (378-454)||(24157184-24157260)
chr4 (378-481)||(22220415-22220517)
chr4 (378-453)||(31917955-31918030)
chr4 (384-485)||(620229-620330)
chr4 (378-458)||(27943623-27943704)
chr4 (378-454)||(47458467-47458543)
chr4 (398-454)||(38510327-38510383)
chr4 (344-445)||(44060973-44061074)
chr4 (390-485)||(25123778-25123872)
chr4 (378-485)||(28734597-28734704)
chr4 (378-452)||(33033077-33033156)
chr4 (384-485)||(52162111-52162209)
chr4 (418-485)||(44868303-44868369)
chr4 (378-485)||(56460082-56460190)
chr4 (382-433)||(50621290-50621341)
chr4 (408-441)||(56564922-56564955)
chr4 (382-458)||(19903914-19903990)
[»] chr6 (36 HSPs)
chr6 (378-485)||(234033-234140)
chr6 (378-483)||(24163763-24163868)
chr6 (378-485)||(23259372-23259479)
chr6 (378-484)||(12063558-12063664)
chr6 (381-485)||(29713453-29713557)
chr6 (381-477)||(19674982-19675078)
chr6 (378-482)||(32193701-32193804)
chr6 (378-454)||(29399945-29400021)
chr6 (384-485)||(24555975-24556076)
chr6 (378-454)||(4850573-4850649)
chr6 (378-485)||(31443492-31443600)
chr6 (378-485)||(13503892-13504002)
chr6 (378-456)||(32429283-32429361)
chr6 (380-451)||(8030643-8030714)
chr6 (378-485)||(3988791-3988895)
chr6 (378-458)||(18737164-18737244)
chr6 (396-480)||(34513655-34513739)
chr6 (414-485)||(1134960-1135031)
chr6 (378-485)||(9940647-9940753)
chr6 (378-455)||(10520716-10520793)
chr6 (381-480)||(12322939-12323035)
chr6 (378-450)||(31233707-31233779)
chr6 (378-456)||(21272178-21272256)
chr6 (381-485)||(12459366-12459469)
chr6 (394-485)||(577076-577166)
chr6 (408-485)||(17267655-17267731)
chr6 (378-485)||(17552295-17552399)
chr6 (344-456)||(10540585-10540696)
chr6 (378-437)||(17828295-17828354)
chr6 (378-485)||(19600420-19600526)
chr6 (444-485)||(17246683-17246724)
chr6 (378-437)||(1502834-1502893)
chr6 (401-436)||(3847703-3847738)
chr6 (444-485)||(10540523-10540564)
chr6 (378-411)||(17246728-17246761)
chr6 (406-454)||(19689357-19689405)
[»] chr5 (55 HSPs)
chr5 (380-485)||(14620541-14620646)
chr5 (378-485)||(39566182-39566289)
chr5 (384-485)||(3306056-3306157)
chr5 (378-485)||(2729833-2729940)
chr5 (378-485)||(13761556-13761663)
chr5 (378-485)||(42104110-42104217)
chr5 (378-485)||(6518975-6519082)
chr5 (378-467)||(21319375-21319464)
chr5 (384-485)||(42661987-42662087)
chr5 (378-485)||(34446074-34446181)
chr5 (378-485)||(39504721-39504829)
chr5 (378-454)||(3025009-3025085)
chr5 (384-485)||(29807362-29807465)
chr5 (378-485)||(34208941-34209051)
chr5 (378-481)||(10344984-10345086)
chr5 (378-441)||(24280992-24281055)
chr5 (378-441)||(24381157-24381220)
chr5 (378-485)||(26660754-26660861)
chr5 (378-485)||(26932347-26932454)
chr5 (378-458)||(4911224-4911304)
chr5 (378-454)||(7317027-7317103)
chr5 (380-454)||(21195380-21195454)
chr5 (380-485)||(8336456-8336561)
chr5 (381-485)||(11977590-11977693)
chr5 (378-485)||(21375698-21375805)
chr5 (384-485)||(27797786-27797884)
chr5 (378-485)||(38369872-38369977)
chr5 (384-485)||(14161948-14162049)
chr5 (415-485)||(39335251-39335321)
chr5 (402-485)||(14005915-14005998)
chr5 (384-485)||(34534365-34534464)
chr5 (378-457)||(36073705-36073784)
chr5 (392-457)||(891088-891154)
chr5 (378-456)||(9066499-9066577)
chr5 (424-485)||(4425019-4425080)
chr5 (384-458)||(13974282-13974352)
chr5 (381-454)||(35765978-35766051)
chr5 (384-485)||(36164892-36164992)
chr5 (397-485)||(27600417-27600505)
chr5 (378-485)||(7721095-7721200)
chr5 (378-485)||(15167059-15167164)
chr5 (378-481)||(25362852-25362954)
chr5 (378-456)||(7579945-7580023)
chr5 (378-485)||(843020-843123)
chr5 (404-461)||(34972713-34972770)
chr5 (380-437)||(39729960-39730017)
chr5 (378-442)||(38362227-38362291)
chr5 (384-454)||(4630870-4630940)
chr5 (384-454)||(24281102-24281171)
chr5 (384-454)||(24381040-24381109)
chr5 (409-458)||(1309432-1309481)
chr5 (378-454)||(43584454-43584531)
chr5 (388-455)||(40776652-40776720)
chr5 (444-485)||(39730011-39730052)
chr5 (436-485)||(42978120-42978169)
[»] chr1 (66 HSPs)
chr1 (381-485)||(24611565-24611669)
chr1 (378-485)||(15823033-15823140)
chr1 (378-485)||(32806983-32807090)
chr1 (378-485)||(48025299-48025406)
chr1 (378-485)||(9915442-9915549)
chr1 (378-485)||(29567895-29568001)
chr1 (382-485)||(50094232-50094335)
chr1 (378-485)||(52125181-52125288)
chr1 (378-485)||(1740686-1740793)
chr1 (378-485)||(5463574-5463681)
chr1 (378-485)||(27208988-27209094)
chr1 (378-485)||(35847978-35848085)
chr1 (378-485)||(44108598-44108705)
chr1 (378-485)||(49468756-49468863)
chr1 (378-485)||(15573606-15573717)
chr1 (380-485)||(10842781-10842886)
chr1 (378-485)||(26755219-26755325)
chr1 (378-485)||(31491815-31491922)
chr1 (378-485)||(31798588-31798695)
chr1 (378-485)||(48009009-48009116)
chr1 (378-454)||(34032156-34032232)
chr1 (378-478)||(38531349-38531449)
chr1 (378-481)||(26595119-26595221)
chr1 (378-481)||(50249309-50249411)
chr1 (378-484)||(46045972-46046078)
chr1 (378-454)||(12591158-12591234)
chr1 (378-454)||(26352157-26352233)
chr1 (378-454)||(34047311-34047387)
chr1 (378-485)||(16757240-16757346)
chr1 (394-485)||(43759347-43759438)
chr1 (378-485)||(46554797-46554903)
chr1 (387-485)||(34110535-34110633)
chr1 (381-454)||(40717372-40717445)
chr1 (378-485)||(25560918-25561025)
chr1 (378-442)||(44258595-44258659)
chr1 (378-485)||(49426460-49426565)
chr1 (378-485)||(13408310-13408417)
chr1 (378-485)||(39477754-39477859)
chr1 (378-453)||(44557121-44557196)
chr1 (378-484)||(43358246-43358352)
chr1 (396-485)||(2610876-2610964)
chr1 (385-442)||(14593408-14593465)
chr1 (385-485)||(25151821-25151915)
chr1 (384-481)||(25487093-25487189)
chr1 (384-454)||(27720963-27721033)
chr1 (384-485)||(46286863-46286964)
chr1 (379-454)||(46271393-46271468)
chr1 (384-485)||(8895061-8895161)
chr1 (390-451)||(52706892-52706953)
chr1 (410-454)||(31699365-31699409)
chr1 (378-485)||(49900803-49900910)
chr1 (378-454)||(52024310-52024386)
chr1 (378-481)||(12484678-12484780)
chr1 (378-485)||(18794588-18794693)
chr1 (378-441)||(24483387-24483450)
chr1 (384-467)||(24884420-24884503)
chr1 (378-481)||(49402921-49403023)
chr1 (384-485)||(14373459-14373559)
chr1 (423-476)||(52066343-52066396)
chr1 (378-454)||(7191283-7191359)
chr1 (378-480)||(7214086-7214185)
chr1 (378-451)||(30292939-30293012)
chr1 (384-481)||(33622415-33622511)
chr1 (378-454)||(39125647-39125723)
chr1 (378-431)||(38947654-38947706)
chr1 (415-447)||(4985-5017)
[»] chr2 (65 HSPs)
chr2 (380-485)||(45081947-45082052)
chr2 (378-485)||(6220451-6220558)
chr2 (378-485)||(29396727-29396834)
chr2 (378-485)||(4288758-4288865)
chr2 (378-485)||(12342092-12342199)
chr2 (378-485)||(13561993-13562100)
chr2 (384-483)||(42004896-42004995)
chr2 (378-486)||(12566027-12566134)
chr2 (378-485)||(441278-441385)
chr2 (378-485)||(4133023-4133128)
chr2 (378-485)||(29808811-29808918)
chr2 (378-485)||(38926605-38926712)
chr2 (379-485)||(30855105-30855210)
chr2 (378-482)||(16807567-16807671)
chr2 (378-482)||(16846848-16846952)
chr2 (378-485)||(18579166-18579272)
chr2 (378-481)||(25383536-25383638)
chr2 (378-481)||(4051755-4051858)
chr2 (378-454)||(27964448-27964524)
chr2 (378-485)||(32228058-32228165)
chr2 (378-485)||(43427335-43427441)
chr2 (385-485)||(18719480-18719579)
chr2 (378-481)||(4658285-4658387)
chr2 (378-481)||(17695877-17695979)
chr2 (378-453)||(34546410-34546485)
chr2 (378-485)||(12393966-12394075)
chr2 (378-451)||(43971503-43971576)
chr2 (378-458)||(29411695-29411775)
chr2 (378-454)||(36177975-36178051)
chr2 (378-454)||(45301764-45301840)
chr2 (394-485)||(1423206-1423297)
chr2 (378-485)||(7028860-7028966)
chr2 (378-485)||(8540037-8540143)
chr2 (378-481)||(35799202-35799303)
chr2 (378-440)||(16792482-16792544)
chr2 (378-454)||(22620412-22620488)
chr2 (378-454)||(33482307-33482383)
chr2 (384-455)||(7644651-7644722)
chr2 (384-454)||(16463110-16463180)
chr2 (378-485)||(37038817-37038920)
chr2 (378-458)||(4469500-4469580)
chr2 (378-442)||(5717512-5717576)
chr2 (378-485)||(8774055-8774159)
chr2 (378-485)||(8789476-8789580)
chr2 (380-480)||(11188545-11188644)
chr2 (378-454)||(36685818-36685894)
chr2 (384-454)||(7874722-7874791)
chr2 (380-458)||(9391632-9391710)
chr2 (380-454)||(14285939-14286013)
chr2 (378-485)||(36106450-36106553)
chr2 (380-485)||(19164358-19164462)
chr2 (378-485)||(7042234-7042340)
chr2 (430-485)||(19469575-19469629)
chr2 (430-485)||(42743080-42743135)
chr2 (378-460)||(17703018-17703100)
chr2 (390-483)||(42753756-42753850)
chr2 (378-447)||(10195573-10195642)
chr2 (378-455)||(35046517-35046594)
chr2 (378-454)||(15083230-15083306)
chr2 (378-426)||(32254592-32254639)
chr2 (379-481)||(45423618-45423719)
chr2 (378-485)||(43480917-43481025)
chr2 (378-484)||(777769-777879)
chr2 (378-485)||(13788498-13788605)
chr2 (378-481)||(28072566-28072671)
[»] chr8 (47 HSPs)
chr8 (378-485)||(4989477-4989584)
chr8 (378-485)||(9304680-9304787)
chr8 (378-485)||(39698713-39698820)
chr8 (378-485)||(40228573-40228680)
chr8 (378-485)||(4760605-4760712)
chr8 (378-485)||(7839457-7839564)
chr8 (378-485)||(9880548-9880655)
chr8 (378-485)||(17920955-17921062)
chr8 (378-485)||(31693669-31693775)
chr8 (378-485)||(39463258-39463364)
chr8 (385-482)||(31899298-31899395)
chr8 (382-485)||(5295454-5295556)
chr8 (384-485)||(43084674-43084775)
chr8 (378-485)||(6374413-6374518)
chr8 (378-485)||(43448715-43448822)
chr8 (378-480)||(19438235-19438337)
chr8 (378-485)||(29025796-29025900)
chr8 (378-485)||(19574385-19574493)
chr8 (378-485)||(34796728-34796832)
chr8 (378-454)||(15160524-15160600)
chr8 (380-463)||(35356308-35356391)
chr8 (378-485)||(44713533-44713640)
chr8 (378-485)||(45358942-45359048)
chr8 (378-442)||(40400441-40400505)
chr8 (384-485)||(34156539-34156640)
chr8 (380-437)||(43974886-43974943)
chr8 (378-458)||(9812172-9812252)
chr8 (384-454)||(514879-514949)
chr8 (384-442)||(40400066-40400124)
chr8 (378-454)||(43724380-43724457)
chr8 (378-454)||(37559611-37559687)
chr8 (378-454)||(40362434-40362510)
chr8 (378-481)||(39765912-39766013)
chr8 (384-454)||(36921362-36921432)
chr8 (404-485)||(13367996-13368076)
chr8 (378-485)||(14234263-14234372)
chr8 (384-483)||(13496240-13496338)
chr8 (378-485)||(15227566-15227672)
chr8 (378-442)||(396303-396368)
chr8 (408-485)||(5790695-5790772)
chr8 (402-453)||(44342865-44342916)
chr8 (384-454)||(29312271-29312341)
chr8 (378-442)||(6116095-6116159)
chr8 (378-454)||(17655907-17655982)
chr8 (387-458)||(31234013-31234084)
chr8 (385-440)||(1511495-1511550)
chr8 (378-412)||(32414726-32414760)
[»] chr7 (61 HSPs)
chr7 (378-485)||(42879979-42880086)
chr7 (378-485)||(1741990-1742097)
chr7 (378-485)||(13405172-13405279)
chr7 (378-485)||(22297995-22298102)
chr7 (378-485)||(41137727-41137834)
chr7 (378-485)||(45948675-45948782)
chr7 (378-485)||(31418558-31418665)
chr7 (378-481)||(33939784-33939886)
chr7 (385-485)||(29530980-29531080)
chr7 (378-485)||(37815723-37815830)
chr7 (382-485)||(48684726-48684829)
chr7 (384-485)||(27947546-27947647)
chr7 (384-485)||(40753474-40753574)
chr7 (385-485)||(44453141-44453241)
chr7 (378-481)||(715913-716015)
chr7 (384-484)||(10476141-10476240)
chr7 (378-481)||(10599212-10599315)
chr7 (378-481)||(12977736-12977838)
chr7 (378-485)||(24680127-24680234)
chr7 (378-485)||(35777818-35777925)
chr7 (382-485)||(37490787-37490892)
chr7 (384-485)||(30312463-30312563)
chr7 (381-485)||(21752157-21752260)
chr7 (378-485)||(27935766-27935873)
chr7 (378-481)||(42285907-42286009)
chr7 (378-485)||(45933633-45933736)
chr7 (378-454)||(24133206-24133282)
chr7 (378-454)||(34012160-34012236)
chr7 (378-485)||(8603974-8604080)
chr7 (378-481)||(18292334-18292436)
chr7 (378-485)||(23935421-23935527)
chr7 (378-485)||(40339458-40339564)
chr7 (381-481)||(18270579-18270679)
chr7 (385-485)||(31196575-31196675)
chr7 (378-454)||(19105077-19105153)
chr7 (378-454)||(34274793-34274869)
chr7 (378-458)||(45499899-45499979)
chr7 (378-485)||(1031154-1031260)
chr7 (378-481)||(44567091-44567193)
chr7 (378-485)||(48843551-48843657)
chr7 (384-458)||(6563486-6563560)
chr7 (391-481)||(25440884-25440973)
chr7 (383-485)||(28289219-28289319)
chr7 (381-454)||(37502321-37502394)
chr7 (378-437)||(24780399-24780458)
chr7 (378-485)||(42753707-42753812)
chr7 (378-454)||(4268610-4268687)
chr7 (384-481)||(31929910-31930006)
chr7 (378-481)||(6747226-6747327)
chr7 (414-485)||(16564812-16564883)
chr7 (414-485)||(16600779-16600850)
chr7 (414-477)||(36807970-36808033)
chr7 (384-437)||(39557327-39557380)
chr7 (378-485)||(2297037-2297148)
chr7 (333-454)||(33682483-33682604)
chr7 (379-427)||(40927163-40927211)
chr7 (378-485)||(8293114-8293219)
chr7 (382-485)||(29636272-29636375)
chr7 (378-485)||(21819283-21819388)
chr7 (431-485)||(23155506-23155560)
chr7 (378-440)||(24424966-24425028)
[»] chr3 (61 HSPs)
chr3 (378-485)||(38016374-38016480)
chr3 (378-485)||(51398009-51398116)
chr3 (380-485)||(30431121-30431226)
chr3 (382-485)||(36729854-36729957)
chr3 (378-485)||(44676220-44676327)
chr3 (378-485)||(47895388-47895495)
chr3 (378-485)||(36460805-36460912)
chr3 (378-485)||(53200725-53200831)
chr3 (378-480)||(3152855-3152957)
chr3 (378-467)||(41850389-41850478)
chr3 (378-485)||(11393544-11393651)
chr3 (378-485)||(30426368-30426475)
chr3 (378-485)||(31853606-31853713)
chr3 (378-485)||(32492225-32492332)
chr3 (378-485)||(33194075-33194182)
chr3 (394-485)||(35557802-35557893)
chr3 (378-485)||(45213766-45213873)
chr3 (378-481)||(50088364-50088467)
chr3 (378-482)||(36844790-36844893)
chr3 (378-485)||(2458006-2458113)
chr3 (380-485)||(40487829-40487933)
chr3 (384-484)||(33024345-33024445)
chr3 (378-485)||(47137962-47138069)
chr3 (378-485)||(50646155-50646261)
chr3 (379-485)||(38363785-38363897)
chr3 (378-454)||(4392195-4392271)
chr3 (378-454)||(7230971-7231047)
chr3 (378-485)||(41287540-41287650)
chr3 (378-485)||(23525360-23525467)
chr3 (378-481)||(42571578-42571680)
chr3 (378-485)||(48901719-48901825)
chr3 (378-485)||(48903285-48903391)
chr3 (378-472)||(39356884-39356978)
chr3 (378-458)||(42071984-42072064)
chr3 (378-481)||(19115386-19115487)
chr3 (378-485)||(19373585-19373691)
chr3 (378-485)||(22857089-22857195)
chr3 (378-485)||(30934854-30934957)
chr3 (378-454)||(4758990-4759066)
chr3 (378-481)||(42886750-42886850)
chr3 (378-454)||(50038246-50038322)
chr3 (378-481)||(31583483-31583585)
chr3 (384-485)||(9189480-9189580)
chr3 (408-485)||(51481964-51482041)
chr3 (378-454)||(11019901-11019977)
chr3 (378-454)||(30315308-30315384)
chr3 (378-485)||(38140949-38141055)
chr3 (384-457)||(25363785-25363857)
chr3 (405-454)||(27067634-27067683)
chr3 (378-454)||(47823526-47823602)
chr3 (414-464)||(45566834-45566884)
chr3 (432-485)||(13756917-13756970)
chr3 (378-433)||(23208387-23208440)
chr3 (398-459)||(24356959-24357018)
chr3 (380-410)||(39168434-39168464)
chr3 (407-437)||(40717763-40717793)
chr3 (378-454)||(50033036-50033114)
chr3 (378-455)||(8817139-8817215)
chr3 (414-459)||(45460698-45460743)
chr3 (378-454)||(50346625-50346700)
chr3 (384-452)||(54403341-54403409)
[»] scaffold0110 (1 HSPs)
scaffold0110 (378-482)||(24790-24894)
[»] scaffold0048 (1 HSPs)
scaffold0048 (378-481)||(62632-62735)
[»] scaffold0294 (1 HSPs)
scaffold0294 (380-485)||(3551-3656)
[»] scaffold0078 (1 HSPs)
scaffold0078 (378-485)||(1460-1567)
[»] scaffold0565 (2 HSPs)
scaffold0565 (378-485)||(9689-9795)
scaffold0565 (378-451)||(10035-10109)
[»] scaffold0015 (1 HSPs)
scaffold0015 (384-485)||(21128-21229)
[»] scaffold0182 (1 HSPs)
scaffold0182 (381-485)||(18302-18405)
[»] scaffold0983 (1 HSPs)
scaffold0983 (378-476)||(743-840)
[»] scaffold0300 (1 HSPs)
scaffold0300 (380-482)||(4566-4667)
[»] scaffold0502 (1 HSPs)
scaffold0502 (384-485)||(619-719)
[»] scaffold0332 (1 HSPs)
scaffold0332 (378-481)||(3862-3964)
[»] scaffold2107 (1 HSPs)
scaffold2107 (384-454)||(591-661)
[»] scaffold0026 (1 HSPs)
scaffold0026 (384-485)||(4145-4246)
[»] scaffold0136 (1 HSPs)
scaffold0136 (408-442)||(9474-9508)


Alignment Details
Target: chr4 (Bit Score: 339; Significance: 0; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 13 - 485
Target Start/End: Complemental strand, 56374098 - 56373626
Alignment:
Q  13 taggtgccttgtcttaggaaaccagttcaacctttattgtgccaatcattttccattaacgaatcaaattacttaaattggctttgtttttccccttccc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56374098 taggtgccttgtcttaggaaaccagttcaacctttattgtgccaatcattttccattaacgaatcaaattacttaaattggctttgtttttccccttccc 56373999  T
Q  113 atttggattacttttttggacatgcttgtcatcatgaatacaaaacttataataatttctttccgtttaaaggtagaaacacatgtgttttaaatcatac 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56373998 atttggattacttttttggacatgcttgtcatcatgaatacaaaacttataataatttctttccgtttaaaggtagaaacacatgtgttttaaatcatac 56373899  T
Q  213 actattgtttactcatttggaggannnnnnnnncttacctcttacctctttctctgtgtgtgtttgggggttgcatatatgagtgtagcaaccaactcat 312  Q
    ||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  56373898 actattgtttactcatttggagga-ttttttttcttacctcttacctctttttctgtgtgtgttt-ggggttgcatatatgagtgtagcaaccaactcat 56373801  T
Q  313 cgagttgagaacatggaatatactccatttattttaaaataagtgtcgttttatctatnnnnnnntgtttcaaaatgaatgtcacttttagtttccaatg 412  Q
    ||||||||||||||| |||||| ||||| ||||||||||| |||| |||||||||||        | ||| ||||||||| | ||||| |||||| |||     
T  56373800 cgagttgagaacatgaaatatattccatctattttaaaatgagtgccgttttatctaaaaaaaaatattttaaaatgaatattactttcagtttctaata 56373701  T
Q  413 taataataattttttcttttcaattgtaccattcaattaatat--tatgttacactagttccaaagtattatttt 485  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||    
T  56373700 taataataattttttcttttcaattgtacccttcaattaatattatatgttacactacttccaaagtattatttt 56373626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 52957948 - 52957841
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  52957948 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaagt 52957849  T
Q  478 attatttt 485  Q
    ||||||||    
T  52957848 attatttt 52957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 52848212 - 52848105
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  52848212 tgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaagt 52848113  T
Q  478 attatttt 485  Q
    ||||||||    
T  52848112 attatttt 52848105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 378 - 480
Target Start/End: Complemental strand, 40345505 - 40345403
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  40345505 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagt 40345406  T
Q  478 att 480  Q
    |||    
T  40345405 att 40345403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 1819561 - 1819668
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  1819561 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 1819660  T
Q  478 attatttt 485  Q
    ||||||||    
T  1819661 attatttt 1819668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 20448038 - 20448145
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  20448038 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattatacccttcaattaatactatgttacactacttccaaagt 20448137  T
Q  478 attatttt 485  Q
    ||||||||    
T  20448138 attatttt 20448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 329 - 485
Target Start/End: Complemental strand, 45043795 - 45043639
Alignment:
Q  329 aatatactccatttattttaaaataagtgtcgttttatctatnnnnnnntgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttc 428  Q
    ||||||||||||   ||||||||| ||||||||||||| ||        ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||    
T  45043795 aatatactccatccgttttaaaatgagtgtcgttttatttaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttc 45043696  T
Q  429 ttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||    
T  45043695 ttttcaattgtacccttcaattaatactatgttacactacttccaaaatattatttt 45043639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 378 - 483
Target Start/End: Complemental strand, 54042341 - 54042236
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||||    
T  54042341 tgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttcttttcaattgtacctttcaattaataccatgttacactacttccaaagt 54042242  T
Q  478 attatt 483  Q
    ||||||    
T  54042241 attatt 54042236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 19878647 - 19878754
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||    
T  19878647 tgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatttatactatgttacactacttccaaagt 19878746  T
Q  478 attatttt 485  Q
    ||||||||    
T  19878747 attatttt 19878754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 19930713 - 19930820
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||| |    
T  19930713 tgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaaat 19930812  T
Q  478 attatttt 485  Q
    ||||||||    
T  19930813 attatttt 19930820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 29519683 - 29519576
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||| | ||||||||||| |||||||||||| ||| |||||    
T  29519683 tgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattgtatccttcaattaatactatgttacactacttctaaagt 29519584  T
Q  478 attatttt 485  Q
    ||||||||    
T  29519583 attatttt 29519576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 44572023 - 44571916
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||| |||| ||||||||||| ||||| || |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  44572023 tgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaagt 44571924  T
Q  478 attatttt 485  Q
    ||||||||    
T  44571923 attatttt 44571916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 2493101 - 2493205
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||| ||    
T  2493101 tgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacattacttccaaggt 2493200  T
Q  478 attat 482  Q
    |||||    
T  2493201 attat 2493205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 10573312 - 10573206
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||  |||| || |||||||||    
T  10573312 tgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacaatacttccaaagt 10573214  T
Q  478 attatttt 485  Q
    ||||||||    
T  10573213 attatttt 10573206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 49080634 - 49080528
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| |||||  |||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  49080634 tgtttcaaaatgaatgtcactttcagtttt-aatgcaataataactttttattttcaattgtacccttcaattaatattatgttacactacttccgaagt 49080536  T
Q  478 attatttt 485  Q
    ||||||||    
T  49080535 attatttt 49080528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 52253844 - 52253954
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttctttt---caattgtaccattcaattaatattatgttacactagttccaa 474  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| || |||||||   |||||||||| |||||||||||||||||| ||||| ||||||    
T  52253844 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttttttcaattgtacccttcaattaatattatgttccactacttccaa 52253943  T
Q  475 agtattatttt 485  Q
     ||||||||||    
T  52253944 ggtattatttt 52253954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 30261258 - 30261364
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||  |||| || || ||||||    
T  30261258 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaatactat-atacattactttcaaagt 30261356  T
Q  478 attatttt 485  Q
    ||||||||    
T  30261357 attatttt 30261364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 384 - 483
Target Start/End: Original strand, 34316227 - 34316326
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| || ||||| |||||||| ||||||    
T  34316227 aaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattgtacccttcaattaatattatattgcactacttccaaaggattatt 34316326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 37654409 - 37654515
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||  ||||||||||  |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  37654409 tgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagt 37654507  T
Q  478 attatttt 485  Q
    ||||||||    
T  37654508 attatttt 37654515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 41920467 - 41920360
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||| ||| ||||||||| | |||||||| ||||||||||||||| |||| |||||||||||||||||| ||||| |||||||||    
T  41920467 tgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaattatacccttcaattaatattatgttccactacttccaaagt 41920368  T
Q  478 attatttt 485  Q
    ||||||||    
T  41920367 attatttt 41920360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 49089463 - 49089569
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||| ||||| |||| |||||||| || |||||||||||| |||||||||    
T  49089463 tgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt-tttccaattatacccttcaattagtactatgttacactacttccaaagt 49089561  T
Q  478 attatttt 485  Q
    ||||||||    
T  49089562 attatttt 49089569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 53814655 - 53814548
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||| |||||||||||||||||||||||  ||||| |||||||| ||||| |||| ||||||||| ||||||||||| |||||||||||| || ||||||    
T  53814655 tgttccaaaatgaatgtcacttttagttaacaatgcaataataactttttatttttaattgtacccttcaattaatactatgttacactactttcaaagt 53814556  T
Q  478 attatttt 485  Q
    ||||||||    
T  53814555 attatttt 53814548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 2728553 - 2728449
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||  ||||| |||| |||||| ||||||| |||| ||||||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaacagtacccttcagttaatactatgttatactacttccaaagtatt 2728454  T
Q  481 atttt 485  Q
    |||||    
T  2728453 atttt 2728449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 19451369 - 19451293
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  19451369 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaata 19451293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 24940878 - 24940985
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| |||   ||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||  ||| |    
T  24940878 tgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttaaaaat 24940977  T
Q  478 attatttt 485  Q
    ||||||||    
T  24940978 attatttt 24940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 47817737 - 47817843
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| | ||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||| |||||||||    
T  47817737 tgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaagt 47817835  T
Q  478 attatttt 485  Q
    ||||||||    
T  47817836 attatttt 47817843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 50623082 - 50623189
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||| |||| | ||||||||| ||||| |||||||| ||||||||||||||| |||| |||||||||||| ||||||||||| ||| |||||    
T  50623082 tgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaattatacccttcaattaatataatgttacactacttctaaagt 50623181  T
Q  478 attatttt 485  Q
    ||||||||    
T  50623182 attatttt 50623189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 45839643 - 45839742
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattattt 484  Q
    |||||||||||||||| |||||| |||  |||||||| ||||| ||||||||||||||||||||||||||||||  |||| || ||||||||||||||||    
T  45839643 aaatgaatgtcactttcagtttctaatacaataataactttttattttcaattgtaccattcaattaatattat-atacattacttccaaagtattattt 45839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 8971041 - 8971147
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||  |||||||| ||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| |||  ||||||| |||||||||    
T  8971041 tgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaataatat-atacactacttccaaagt 8971139  T
Q  478 attatttt 485  Q
    ||||||||    
T  8971140 attatttt 8971147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 34413705 - 34413599
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| | |||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||  ||||||| ||| ||| |    
T  34413705 tgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattgtaccattcaattaatattat-atacactacttctaaaat 34413607  T
Q  478 attatttt 485  Q
    ||||||||    
T  34413606 attatttt 34413599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 52915700 - 52915598
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| ||| ||||||||| | ||  |||||| |||||||||    
T  52915700 tgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattgtatcatccaattaatactctg-cacactacttccaaagt 52915602  T
Q  478 atta 481  Q
    ||||    
T  52915601 atta 52915598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 29370608 - 29370710
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgta-ccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||||||| || ||||||||||| ||  |||||||| ||||||||||||||    
T  29370608 aaaataaatgtcactttcagttttcaatataataataactttttcttttcaattgtatcctttcaattaatactaaattacactacttccaaagtattat 29370707  T
Q  483 ttt 485  Q
    |||    
T  29370708 ttt 29370710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 344 - 485
Target Start/End: Original strand, 27653641 - 27653780
Alignment:
Q  344 ttttaaaataagtgtcgttttatctatnnnnnnntgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacca 443  Q
    ||||||||| |||||||||||| |||        ||||| ||||| ||||||| |||||||||| |||| ||| |||| |||||  |||||||||||||     
T  27653641 ttttaaaatgagtgtcgttttaactaaaataaattgttttaaaataaatgtcatttttagtttctaatgcaatgataacttttt--tttcaattgtaccc 27653738  T
Q  444 ttcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| |||||||||||| ||||||| |||||||||    
T  27653739 ttcaattaatactatgttacactacttccaaaatattatttt 27653780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 4505336 - 4505400
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  4505336 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc 4505400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 50203075 - 50203179
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| |||  |||||| |||||||| |||||||||||||||||||| |||||||||||||||  |||| || ||| |||||    
T  50203075 tgttttaaaatgaatgtcactttcagt--ccaatgcaataataactttttcttttcaattgtacccttcaattaatattat-atacattacttcaaaagt 50203171  T
Q  478 attatttt 485  Q
    ||||||||    
T  50203172 attatttt 50203179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 37624555 - 37624661
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||| | | ||||||||| | ||  |||||| ||| |||||    
T  37624555 tgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctg-cacactacttcaaaagt 37624653  T
Q  478 attatttt 485  Q
    ||||||||    
T  37624654 attatttt 37624661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 39982106 - 39982173
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaat 449  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaat 39982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 51733652 - 51733550
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| | ||||||| | ||||||||| | ||  |||||| |||||||||    
T  51733652 tgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctttttacttgtaccctccaattaatactctg-cacactacttccaaagt 51733554  T
Q  478 atta 481  Q
    ||||    
T  51733553 atta 51733550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 403 - 485
Target Start/End: Complemental strand, 38991894 - 38991812
Alignment:
Q  403 gtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||||| |||||||| |||||||||| |||||||   |||||||||||||||||||||||| || ||||||||||||||    
T  38991894 gtttccaatgcaataataactttttcttttgaattgtattcttcaattaatattatgttacactactttcaaagtattatttt 38991812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 6991413 - 6991314
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| ||||| ||||  |||||||||||||||||||||| |||||| |||| ||||||||||  ||||||| || ||||||||||||    
T  6991413 aaaatgaatgtcactttcagttttcaatacaataataattttttcttttcaa-tgtacccttcagttaatattat-atacactattttcaaagtattatt 6991316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 18430024 - 18430095
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || | ||||||||||||    
T  18430024 aataataactttttcttttcaattgtacccttcaattaatactatgttacactactttctaagtattatttt 18430095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 25231174 - 25231276
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| | ||||||||| |||||||| ||||||||||| |||||||| |  |||||||| | || ||||||| |||||||||    
T  25231174 tgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattgtaccctataattaatactttg-tacactacttccaaagt 25231272  T
Q  478 atta 481  Q
    ||||    
T  25231273 atta 25231276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 42605615 - 42605678
Alignment:
Q  422 ttttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||    
T  42605615 ttttttcttttcaattgtacccttcaattaatattatgttacattactttcaaagtattatttt 42605678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 7906152 - 7906078
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||| |||||||  || |||||||| |||||||||||||||||||| | |||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaattgtaccctccaattaata 7906078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 40837129 - 40837226
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgta-ccattcaattaatattatgttacactagttccaaa 475  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| ||||| |||||||| ||| ||  |||||||||| |||||||||||| |||||||    
T  40837129 tgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt-ttttcaatcgtacccgatcaattaatactatgttacactacttccaaa 40837226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 41496204 - 41496309
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||| ||||||| ||||| ||||  |||||||| |||||||||||||||||||  |||||||||||||||  ||||||| | ||||| |    
T  41496204 tgtttcaaaataaatctcactttcagttttcaatacaataataactttttcttttcaattgtactcttcaattaatattat-atacactactcccaaaat 41496302  T
Q  478 attattt 484  Q
    |||||||    
T  41496303 attattt 41496309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 481
Target Start/End: Complemental strand, 21864535 - 21864439
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| | | ||||||||| | ||  |||||| |||||||||||||    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctg-cacactacttccaaagtatta 21864439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 481
Target Start/End: Complemental strand, 21920396 - 21920300
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| | | ||||||||| | ||  |||||| |||||||||||||    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctg-cacactacttccaaagtatta 21920300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 40011032 - 40010943
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattt-tttcttttcaattgtaccattcaattaatattatgttacact 466  Q
    ||||| ||||||||||| ||||| ||||||||||| ||||| || || ||| |||||||||||||| ||||||||||| |||||||||||    
T  40011032 tgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaatactatgttacact 40010943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 485
Target Start/End: Complemental strand, 46392205 - 46392114
Alignment:
Q  392 tgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||| | ||| ||| | |||||||||||||||||||||||| |||| ||||||||||| ||| |||||||| |||||||||||||||||    
T  46392205 tgtcactttcacttttcaaagcaataataattttttcttttcaattatacctttcaattaata-tat-ttacactacttccaaagtattatttt 46392114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 11364256 - 11364331
Alignment:
Q  409 aatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||||  || |||| |||||||||||||||||    
T  11364256 aatgaaataataactttttcttttcaattgtacccttcaattaatattat-atatactacttccaaagtattatttt 11364331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 24157184 - 24157260
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||| ||||||| | || ||||||||    
T  24157184 tgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctttttaattgtatcctttaattaata 24157260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 22220517 - 22220415
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||| ||| | ||| ||||| |||||||| |||||||||||||||||||| | ||||||||| ||||  |||||| ||||||| |    
T  22220517 tgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttcttttcaattgtaccctccaattaatactatg-cacactacttccaaaat 22220419  T
Q  478 atta 481  Q
    ||||    
T  22220418 atta 22220415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 453
Target Start/End: Original strand, 31917955 - 31918030
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaat 453  Q
    ||||| ||||||||| ||||||| || |||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  31917955 tgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaattttacccttcaattaat 31918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 620330 - 620229
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataatttttt-cttttcaattgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||||||| ||| ||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||||| | |  |||| || ||||||||||||||    
T  620330 aaaatgaatatcagtttaagtttctaatgcaataataatttttttcttttcaattgtacccttcaattaatactct-atacattacttccaaagtattat 620232  T
Q  483 ttt 485  Q
    |||    
T  620231 ttt 620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 27943704 - 27943623
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||||||||||||||||||||| | ||| ||||| |||||||| || ||| ||||||||| |||| |||||||||||||||    
T  27943704 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaattatacccttcaattaatattat 27943623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 47458543 - 47458467
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataatttttt-cttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||| ||| |||||||| |||| ||||||| |||||| |||||||||||||||||||||||||||    
T  47458543 tgttttaaaatgaatgtaactcttagtttc-aatgcaataatattttttttcttttcaattgtaccattcaattaata 47458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 454
Target Start/End: Complemental strand, 38510383 - 38510327
Alignment:
Q  398 ttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||||    
T  38510383 ttttagttttcaatgcaataataactttttcttttcaattgtaccatccaattaata 38510327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 44060973 - 44061074
Alignment:
Q  344 ttttaaaataagtgtcgttttatctatnnnnnnntgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacca 443  Q
    ||||||||| |||||||||||| ||||       ||||| | ||||||||||||||| | |||| |||  |||||||| |||||||||||||||||||||    
T  44060973 ttttaaaatgagtgtcgttttaactataaaaatttgttttataatgaatgtcactttcattttctaatacaataataactttttcttttcaattgtacca 44061072  T
Q  444 tt 445  Q
    ||    
T  44061073 tt 44061074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 485
Target Start/End: Complemental strand, 25123872 - 25123778
Alignment:
Q  390 aatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| ||| ||||| ||||  ||||||||||||||||||||| ||||||| ||||||||||| |||  ||||| | ||||||| |||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttcttttcagttgtacccttcaattaatactat-atacacgacttccaaaatattatttt 25123778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 28734597 - 28734704
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||| ||||||||||||||| |||||||| || ||||||||         |||||||||||| ||||||||||| |||||||||||| || ||||||    
T  28734597 tgtttcataatgaatgtcactttcagtttccattgcaataataaaaaaaaaaattcaattgtacccttcaattaatactatgttacactacttgcaaagt 28734696  T
Q  478 attatttt 485  Q
    ||||||||    
T  28734697 attatttt 28734704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 33033077 - 33033156
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataat-----tttttcttttcaattgtaccattcaattaa 452  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||      ||||| ||||||||||||||||| ||||||    
T  33033077 tgttttaaaatgaatgtcacttttagtttccaatgcaataataaaataactttttattttcaattgtaccatttaattaa 33033156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 52162111 - 52162209
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| | ||| ||| | ||||||||||||||  ||| |||| |||| ||||||||||| ||  | ||||||||||||||||||||||    
T  52162111 aaaatgaatgtcactttcaattttcaacgcaataataatttttt--tttgaattatacccttcaattaatactaaat-acactagttccaaagtattatt 52162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 44868369 - 44868303
Alignment:
Q  418 ataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||| |||||||||||||||||||||||||||||||| |||  |||| || ||||||| |||||||||    
T  44868369 ataactttttcttttcaattgtaccattcaattaataatat-atacattacttccaaaatattatttt 44868303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 56460082 - 56460190
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaat--taatattatgttacactagttccaaa 475  Q
    ||||| ||||||||||||||||| || || ||||| |||| ||| |||||||||| |||| || | ||||||  |||||||||  ||||||| |||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctttttaattatatccttcaattataatattat-atacactacttccaaa 56460180  T
Q  476 gtattatttt 485  Q
     |||||||||    
T  56460181 atattatttt 56460190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 433
Target Start/End: Complemental strand, 50621341 - 50621290
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttc 433  Q
    ||||||| ||||||||||| ||||| ||||| |||||||| |||||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttcttttc 50621290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 441
Target Start/End: Original strand, 56564922 - 56564955
Alignment:
Q  408 caatgtaataataattttttcttttcaattgtac 441  Q
    ||||||||||||||||| ||||||||||||||||    
T  56564922 caatgtaataataatttgttcttttcaattgtac 56564955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 458
Target Start/End: Complemental strand, 19903990 - 19903914
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||||| ||||||||||| |||||| |||  |||||||  |||| | ||||  ||||||| |||||||||||||||    
T  19903990 tcaaaataaatgtcactttgagtttcaaatacaataatacattttacctttcggttgtacctttcaattaatattat 19903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 234033 - 234140
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  234033 tgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagt 234132  T
Q  478 attatttt 485  Q
    ||||||||    
T  234133 attatttt 234140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 378 - 483
Target Start/End: Complemental strand, 24163868 - 24163763
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||    
T  24163868 tgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacatttcaattaatactatgttacactacttccaaagt 24163769  T
Q  478 attatt 483  Q
    ||||||    
T  24163768 attatt 24163763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 23259479 - 23259372
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| ||||||||||| || ||||| |||| ||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  23259479 tgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaattaatattatgttacactacttccaaagt 23259380  T
Q  478 attatttt 485  Q
    ||||||||    
T  23259379 attatttt 23259372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 12063664 - 12063558
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| ||| |||||||||||| ||| |||||    
T  12063664 tgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtacccttcaattgatactatgttacactacttctaaagt 12063565  T
Q  478 attattt 484  Q
    |||||||    
T  12063564 attattt 12063558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 29713557 - 29713453
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    |||||||||||||||| |||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagtatt 29713458  T
Q  481 atttt 485  Q
    |||||    
T  29713457 atttt 29713453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 19674982 - 19675078
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaatactatgttgcactacttctaaagt 19675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 32193701 - 32193804
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||  ||||||| |||||||||    
T  32193701 tgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatactat-atacactacttccaaagt 32193799  T
Q  478 attat 482  Q
    |||||    
T  32193800 attat 32193804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 29399945 - 29400021
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  29399945 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaata 29400021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 24556076 - 24555975
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| || || ||||||||| ||    
T  24556076 aaaataaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaatactatgttacattattttcaaagtattttt 24555977  T
Q  484 tt 485  Q
    ||    
T  24555976 tt 24555975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 4850649 - 4850573
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  4850649 tgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaata 4850573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 31443600 - 31443492
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    ||||| ||||||||||| | ||| ||||||||||| |||||||| |||||| |||||||||||||| ||||||||||| |||||||||  | ||||||||    
T  31443600 tgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaatactatgttacataacttccaaag 31443501  T
Q  477 tattatttt 485  Q
    |||||||||    
T  31443500 tattatttt 31443492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 13504002 - 13503892
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa--ttttttcttttcaattgtaccattcaattaatattatgt-tacactagttccaa 474  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||  ||||||  ||||||||||||| ||||||||||| ||| | ||||||| || |||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaatactatatatacactactttcaa 13503903  T
Q  475 agtattatttt 485  Q
    |||||||||||    
T  13503902 agtattatttt 13503892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 456
Target Start/End: Original strand, 32429283 - 32429361
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatt 456  Q
    |||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||| |||||||||||    
T  32429283 tgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttcaattgtatcatccaattaatatt 32429361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 8030643 - 8030714
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaatta 451  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  8030643 tttcaaaatgaatgttactttcagttttcaatgtaataataattttttcttttcaactgtacccttcaatta 8030714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 3988895 - 3988791
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| |||  |||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||  || |||| ||| |||||    
T  3988895 tgtttcaaaataaat--cactttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactat-atatactatttcaaaagt 3988799  T
Q  478 attatttt 485  Q
    ||||||||    
T  3988798 attatttt 3988791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 18737244 - 18737164
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| | ||||||||||||| |||| || ||||||||||||    
T  18737244 tgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaattataccctttaattaatattat 18737164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 396 - 480
Target Start/End: Complemental strand, 34513739 - 34513655
Alignment:
Q  396 acttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||| | |||||||||| ||||||||| ||| ||||||| ||||    
T  34513739 actttcagtttccaatgcaataataactttttcttttcaattgtatccttcaattaatgttatgttaccctacttccaaaatatt 34513655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 1134960 - 1135031
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||| |||||||| ||||||| |||||||||    
T  1134960 aataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatattatttt 1135031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 9940647 - 9940753
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||| ||||||||| ||||| ||||| |||||||| ||||  |||||||||||||| |||||||||||||||   |||||| ||||||| |    
T  9940647 tgttttaaaatgattgtcactttcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattat-acacactacttccaaaat 9940745  T
Q  478 attatttt 485  Q
    ||||||||    
T  9940746 attatttt 9940753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 10520793 - 10520716
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatat 455  Q
    ||||| ||||| ||||||||||| | ||| ||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  10520793 tgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaattgtacccttcaattaatat 10520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 12323035 - 12322939
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    |||||||||||||||||||| ||||||||||| |||||||  |||||  ||||||||| ||| ||||||||||| |||  ||||||| ||||||||||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataata--ttttttatttcaattgcacccttcaattaatactat-atacactacttccaaagtatt 12322939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 450
Target Start/End: Complemental strand, 31233779 - 31233707
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaatt 450  Q
    ||||| ||||||||||||||||| ||||| || || ||||||||| ||||||||||||||||||| |||||||    
T  31233779 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 31233707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 21272256 - 21272178
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatt 456  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||  ||||||||| ||| ||||  |||||||||||||    
T  21272256 tgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctttttaatcgtacatttcaattaatatt 21272178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 12459469 - 12459366
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    ||||||||||||||||||||  ||||| |||  |||||||  ||||||||||||||| |||| ||||||||||| |||  |||| || ||||||||||||    
T  12459469 ttcaaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaattatacccttcaattaatactat-atacattacttccaaagtatt 12459371  T
Q  481 atttt 485  Q
     ||||    
T  12459370 gtttt 12459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 485
Target Start/End: Original strand, 577076 - 577166
Alignment:
Q  394 tcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| ||||| ||||| |||||||| ||| || |||||||| |||| |||||||||||||||  ||||||| ||||||| |||||||||    
T  577076 tcactttcagttttcaatgcaataataactttatcatttcaattatacccttcaattaatattat-atacactacttccaaattattatttt 577166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 485
Target Start/End: Complemental strand, 17267731 - 17267655
Alignment:
Q  408 caatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||| |||||||||||||||||||||| |||||| || ||||||||||||  ||||||| ||  |||||||||||||    
T  17267731 caatgcaataataattttttcttttcaactgtaccctttaattaatattat-atacactatttttaaagtattatttt 17267655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 17552399 - 17552295
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||| |||||||||||| ||| ||||||||||| |||||||  ||||| ||||||||||||   || |||||||| |||  ||||||| ||||||| |    
T  17552399 tgtttcgaaatgaatgtcattttcagtttccaatgcaataata--ttttttttttcaattgtaatttttaattaatactat-atacactacttccaaaat 17552303  T
Q  478 attatttt 485  Q
    ||||||||    
T  17552302 attatttt 17552295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 456
Target Start/End: Complemental strand, 10540696 - 10540585
Alignment:
Q  344 ttttaaaataagtgtcgttttatctatnnnnnnntgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacca 443  Q
    ||||||||| |||||||||||| |||        ||||||||||| ||||||||||| | ||||||||| ||||||||  ||||  |||||||||||||     
T  10540696 ttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt-gtttcaattgtaccc 10540598  T
Q  444 ttcaattaatatt 456  Q
    |||||||| ||||    
T  10540597 ttcaattattatt 10540585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 17828295 - 17828354
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaatt 437  Q
    ||||| ||||||||||| | ||| ||| | ||||||||||||||||||||||||||||||    
T  17828295 tgttttaaaatgaatgttattttaagtattcaatgtaataataattttttcttttcaatt 17828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 19600420 - 19600526
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||  ||||||| ||||| | ||| |||||||||||||||| |||| ||||| | || ||||||| ||| | ||| ||| ||||||| |    
T  19600420 tgtttcaaaatgaagatcactttaagttttctatgcaataataattttttctcttcatttgtatcttttaattaatgtta-gatacgctacttccaaaat 19600518  T
Q  478 attatttt 485  Q
    ||||||||    
T  19600519 attatttt 19600526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 17246724 - 17246683
Alignment:
Q  444 ttcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  17246724 ttcaattaatactatgttacactacttccaaagtattatttt 17246683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 1502893 - 1502834
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaatt 437  Q
    ||||| ||||| ||||||| ||| ||||||||||| |||| ||||| |||||||||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttcttttcaatt 1502834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Original strand, 3847703 - 3847738
Alignment:
Q  401 tagtttccaatgtaataataattttttcttttcaat 436  Q
    |||||||||||| |||||||||||||||||||||||    
T  3847703 tagtttccaatgcaataataattttttcttttcaat 3847738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 10540564 - 10540523
Alignment:
Q  444 ttcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| ||| |||||||| |||||||||||||||||    
T  10540564 ttcaattaatactatattacactacttccaaagtattatttt 10540523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 17246761 - 17246728
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaat 411  Q
    ||||||||||||||||||||||| ||||||||||    
T  17246761 tgtttcaaaatgaatgtcactttaagtttccaat 17246728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 19689357 - 19689405
Alignment:
Q  406 tccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||| |||||||| ||||||||||||| |||||  |||||||||||    
T  19689357 tccaatgcaataataactttttcttttcaactgtactcttcaattaata 19689405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 7e-41; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 14620646 - 14620541
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14620646 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacactacttccaaagtat 14620547  T
Q  480 tatttt 485  Q
    ||||||    
T  14620546 tatttt 14620541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 39566182 - 39566289
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  39566182 tgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaagt 39566281  T
Q  478 attatttt 485  Q
    ||||||||    
T  39566282 attatttt 39566289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 3306157 - 3306056
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactctgttacactacttccaaagtattatt 3306058  T
Q  484 tt 485  Q
    ||    
T  3306057 tt 3306056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 2729940 - 2729833
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | |||||||||||| |||||||||    
T  2729940 tgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaaaactatgttacactacttccaaagt 2729841  T
Q  478 attatttt 485  Q
    ||||||||    
T  2729840 attatttt 2729833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 13761556 - 13761663
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  13761556 tgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagt 13761655  T
Q  478 attatttt 485  Q
    ||||||||    
T  13761656 attatttt 13761663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 42104217 - 42104110
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||| |||||||||||| |||||| ||    
T  42104217 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattttacccttcaattaatactatgttacactacttccaaggt 42104118  T
Q  478 attatttt 485  Q
    ||||||||    
T  42104117 attatttt 42104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 6518975 - 6519082
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  6518975 tgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 6519074  T
Q  478 attatttt 485  Q
    ||||||||    
T  6519075 attatttt 6519082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 378 - 467
Target Start/End: Complemental strand, 21319464 - 21319375
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacacta 467  Q
    ||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  21319464 tgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacacta 21319375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 42662087 - 42661987
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  42662087 aaaatgaatgttatttttagttttcaatgtaataataatttttt-ttttcaattgtacccttcaattaatactatgttacactacttccaaagtattatt 42661989  T
Q  484 tt 485  Q
    ||    
T  42661988 tt 42661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 34446181 - 34446074
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| ||||| ||||  ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  34446181 tgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttttcaattgtacccttcaattaatactatgttacactacttccaaagt 34446082  T
Q  478 attatttt 485  Q
    ||||||||    
T  34446081 attatttt 34446074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 39504721 - 39504829
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaat-aataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||| | || ||||||||||||||||||||| |||||||     
T  39504721 tgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaatattatgttacactacttccaaaa 39504820  T
Q  477 tattatttt 485  Q
    |||||||||    
T  39504821 tattatttt 39504829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 3025085 - 3025009
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  3025085 tgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaata 3025009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 29807465 - 29807362
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataata--attttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||| ||||| |||||| |||| |||||||  | |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  29807465 aaaatgaatgttactttgagtttctaatgcaataatataactttttcttttcaattgtaccattcaattaatactatgttacactacttccaaaatatta 29807366  T
Q  482 tttt 485  Q
    ||||    
T  29807365 tttt 29807362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 34209051 - 34208941
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaat---gtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaa 474  Q
    ||||||||||||||||||||||| ||||||||||   | |||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||| ||||||    
T  34209051 tgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaatattatattacactacttccaa 34208952  T
Q  475 agtattatttt 485  Q
    | |||||||||    
T  34208951 aatattatttt 34208941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 10345086 - 10344984
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||    
T  10345086 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagt 10344988  T
Q  478 atta 481  Q
    ||||    
T  10344987 atta 10344984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 24280992 - 24281055
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtac 441  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24280992 tgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24281055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 24381220 - 24381157
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtac 441  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24381220 tgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 26660754 - 26660861
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| | ||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||| | |||    
T  26660754 tgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatactacttctagagt 26660853  T
Q  478 attatttt 485  Q
    ||||||||    
T  26660854 attatttt 26660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 26932347 - 26932454
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| | ||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||| | |||    
T  26932347 tgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatactacttctagagt 26932446  T
Q  478 attatttt 485  Q
    ||||||||    
T  26932447 attatttt 26932454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 4911304 - 4911224
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||| ||||||||    
T  4911304 tgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttcttttcaactgtacccttcaatcaatattat 4911224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 7317027 - 7317103
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  7317027 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaata 7317103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 21195380 - 21195454
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  21195380 tttcaaaatgattgtcaatttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaata 21195454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 8336561 - 8336456
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||  | ||| ||||| |||||||| || || |||||||||||||  ||||||||||| |||||||||||| ||||||| |||    
T  8336561 tttcaaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattgtactcttcaattaatactatgttacactacttccaaaatat 8336462  T
Q  480 tatttt 485  Q
    ||||||    
T  8336461 tatttt 8336456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 11977590 - 11977693
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    ||||||| |||||||||||| ||||||||||   ||||||| |||||||||||||||||| | || ||||||||||||  ||||||| ||||||||||||    
T  11977590 ttcaaaacgaatgtcactttcagtttccaataccataataactttttcttttcaattgtatcctttaattaatattat-atacactacttccaaagtatt 11977688  T
Q  481 atttt 485  Q
    |||||    
T  11977689 atttt 11977693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 21375805 - 21375698
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||||||| ||||| ||||| || |||  |||||| |||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  21375805 tgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttcaattgtacccttcaattaatactatgttacactactttcaaagt 21375706  T
Q  478 attatttt 485  Q
    | ||||||    
T  21375705 aatatttt 21375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 27797786 - 27797884
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||| |||||| ||   || | || |||||||||||||||    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaatacta---tatattacttccaaagtattatt 27797882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 38369872 - 38369977
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||| ||||||||| ||||||||| |||||||| |||||||||| ||||||||  |||||||||||||||  ||||||| || ||||||    
T  38369872 tgttttaaaatgaatatcactttta-tttccaatgcaataataactttttcttttaaattgtactcttcaattaatattat-atacactactttcaaagt 38369969  T
Q  478 attatttt 485  Q
    ||||||||    
T  38369970 attatttt 38369977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 14162049 - 14161948
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaa-ttgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||| ||||||| |||  ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  14162049 aaaataaatgtcattttaggtttctaatgcaataataattttttcttttcaatttgtaccattcaattaatactat-atacactacttccaaagtattat 14161951  T
Q  483 ttt 485  Q
    |||    
T  14161950 ttt 14161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 415 - 485
Target Start/End: Complemental strand, 39335321 - 39335251
Alignment:
Q  415 ataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtgttatttt 39335251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 485
Target Start/End: Original strand, 14005915 - 14005998
Alignment:
Q  402 agtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| |||||||| |||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||||||    
T  14005915 agtttccaatgcaataataactttttctttttaattttatccttcaattaatactatgttacactacttccaaggtattatttt 14005998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 34534365 - 34534464
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataatttt-ttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||||||||||||||| |  |||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||  |||||| ||||||| ||||||    
T  34534365 aaaatgaatgtcactttca--ttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatg-cacactacttccaaaatattat 34534461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 457
Target Start/End: Complemental strand, 36073784 - 36073705
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatta 457  Q
    |||||| |||||||||||| ||| | ||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  36073784 tgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttcttttcaattgtatcattcaattaatatta 36073705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 891154 - 891088
Alignment:
Q  392 tgtcacttttagtttccaatgtaataataattttttctttt-caattgtaccattcaattaatatta 457  Q
    ||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  891154 tgtcactttcacttttcaatgtaataataattttttctttttcaattgtaccattcaattaatatta 891088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 9066577 - 9066499
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatt 456  Q
    ||||||||||||||||| ||||| ||||| ||||| ||||||||  ||||||||||| ||||| |||||||||||||||    
T  9066577 tgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttcttttcatttgtagcattcaattaatatt 9066499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 4425019 - 4425080
Alignment:
Q  424 ttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||    
T  4425019 ttttcttttcaattgtacctttcaattaatactatattacactacttccaaagtattatttt 4425080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 13974282 - 13974352
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||||||||||||||||||    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  13974282 aaaatgaatgtcacttttag----caatgcaataataattttatcttttcaattgtaccattcaattattattat 13974352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 35766051 - 35765978
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||||| ||||| ||||  |||||||| |||||||||||||||||||| | |||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttcttttcaattgtaccgtccaattaata 35765978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 36164892 - 36164992
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||| ||| ||||||||||| | |||||| ||||||||||||||| |||| ||||||||||| |||  |||| || ||||||| |||||||    
T  36164892 aaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaattatacccttcaattaatactat-atacattacttccaaaatattatt 36164990  T
Q  484 tt 485  Q
    ||    
T  36164991 tt 36164992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 485
Target Start/End: Original strand, 27600417 - 27600505
Alignment:
Q  397 cttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||| ||| |||||||| || | ||||||| ||||    
T  27600417 ctttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatactatattacactattttcgaagtattttttt 27600505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 7721095 - 7721200
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| |||||||  |||| ||||| |||||||| ||||| |||||||||||| |||||||| ||||||||  |||| || || ||||||    
T  7721095 tgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt-ttttcaattgtatcattcaatcaatattat-atacattactttcaaagt 7721192  T
Q  478 attatttt 485  Q
    ||||||||    
T  7721193 attatttt 7721200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 15167164 - 15167059
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||||||| |||  |||||||| || |||  ||||||| ||||||| |    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt-ttttcaattttactcttcaattattactat-atacactacttccaaaat 15167067  T
Q  478 attatttt 485  Q
    ||||||||    
T  15167066 attatttt 15167059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 25362954 - 25362852
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||| ||||| |||||| |||| |||||| | ||||||||||||||| |||| | ||||||||| | ||  |||||| |||||||||    
T  25362954 tgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaattttaccctccaattaatactctg-cacactacttccaaagt 25362856  T
Q  478 atta 481  Q
    ||||    
T  25362855 atta 25362852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 7580023 - 7579945
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatt 456  Q
    ||||| ||||||||||| ||||| ||||| ||||  |||||||| |||||||||||||||||||  |||||||||||||    
T  7580023 tgttttaaaatgaatgttactttcagttttcaatacaataataactttttcttttcaattgtactcttcaattaatatt 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 843020 - 843123
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||| |||||||||||||||| ||||| ||||| |||||    |||| ||||||||||||||||||||||||||||| |  ||||||| ||| |||||    
T  843020 tgtttcgaaatgaatgtcactttcagtttgcaatgcaataac---ttttccttttcaattgtaccattcaattaatattgt-atacactacttcaaaagt 843115  T
Q  478 attatttt 485  Q
     |||||||    
T  843116 gttatttt 843123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 34972770 - 34972713
Alignment:
Q  404 tttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgtt 461  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||    
T  34972770 tttccaatgcaataataattttttatttttaattgtaccattcaatgaatattatgtt 34972713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 39729960 - 39730017
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaatt 437  Q
    ||||||||||||||| | ||| ||||||||||| |||||||| |||||||||||||||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaatt 39730017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 38362291 - 38362227
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||||||||||||||||||||| | ||| ||||| |||||||| |||| |||||||||| ||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttttccttttcaattatacc 38362227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 4630870 - 4630940
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||| ||||| ||||  |||||||| |||||||||||||||||| | | |||||||||    
T  4630870 aaaataaatgtcactttcagttttcaatacaataataactttttcttttcaattgtatcctccaattaata 4630940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 24281102 - 24281171
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||| |||||||||||||  |||| | ||||||||||||| ||||||||||| |||| ||||||||    
T  24281102 aaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgta-catttaattaata 24281171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 24381109 - 24381040
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||| |||||||||||||  |||| | ||||||||||||| ||||||||||| |||| ||||||||    
T  24381109 aaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgta-catttaattaata 24381040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 1309481 - 1309432
Alignment:
Q  409 aatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    |||| ||||||||||||||||||| || |||||| |||||||||||||||    
T  1309481 aatgcaataataattttttctttttaagtgtacctttcaattaatattat 1309432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 43584531 - 43584454
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||  ||| ||||| ||||| |||||||| |||||||||||||||| |||| | |||||||||    
T  43584531 tgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttttcttttcaattataccctccaattaata 43584454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 455
Target Start/End: Complemental strand, 40776720 - 40776652
Alignment:
Q  388 tgaatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaatat 455  Q
    ||||||||||||| | ||| |||||||||||||| |||||| ||| |||||||||| | ||||||||||    
T  40776720 tgaatgtcactttcatttttcaatgtaataataacttttttatttccaattgtaccctccaattaatat 40776652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 39730011 - 39730052
Alignment:
Q  444 ttcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| |||||||||||| ||||||| |||||||||    
T  39730011 ttcaattaatactatgttacactacttccaaaatattatttt 39730052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 42978169 - 42978120
Alignment:
Q  436 ttgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||| |||||||||||| |||||||||||| || || |||||||||||    
T  42978169 ttgtactattcaattaatactatgttacactacttacatagtattatttt 42978120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 24611669 - 24611565
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  24611669 ttcaaaatgaatgtcacttttagtttctaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtatt 24611570  T
Q  481 atttt 485  Q
    |||||    
T  24611569 atttt 24611565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 15823033 - 15823140
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  15823033 tgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 15823132  T
Q  478 attatttt 485  Q
    ||||||||    
T  15823133 attatttt 15823140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 32807090 - 32806983
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||||||||| || ||||||    
T  32807090 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaaataatactatgttacactactttcaaagt 32806991  T
Q  478 attatttt 485  Q
    ||||||||    
T  32806990 attatttt 32806983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 48025406 - 48025299
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  48025406 tgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgtttcaattgtacccttcaattaatactatgttacactacttccaaagt 48025307  T
Q  478 attatttt 485  Q
    ||||||||    
T  48025306 attatttt 48025299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 9915442 - 9915549
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  9915442 tgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttgcaaagt 9915541  T
Q  478 attatttt 485  Q
    ||||||||    
T  9915542 attatttt 9915549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 29567895 - 29568001
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||| |||||||||    
T  29567895 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaagt 29567993  T
Q  478 attatttt 485  Q
    ||||||||    
T  29567994 attatttt 29568001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 485
Target Start/End: Original strand, 50094232 - 50094335
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||     
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttacaaagtattg 50094331  T
Q  482 tttt 485  Q
    ||||    
T  50094332 tttt 50094335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 52125288 - 52125181
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||| |||||||||||| ||| ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||||| ||||| |||    
T  52125288 tgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattgtacccttcaattaatattatgttacactacttccatagt 52125189  T
Q  478 attatttt 485  Q
    ||||||||    
T  52125188 attatttt 52125181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 1740793 - 1740686
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || ||||||||| |||||||      
T  1740793 tgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattgtaccattcaattaatactacgttacactacttccaaaac 1740694  T
Q  478 attatttt 485  Q
    ||||||||    
T  1740693 attatttt 1740686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 5463574 - 5463681
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||  || |||||||| |||||||||||| ||||||| |    
T  5463574 tgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttcaattgtacactttaattaatactatgttacactacttccaaaat 5463673  T
Q  478 attatttt 485  Q
    ||||||||    
T  5463674 attatttt 5463681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 27208988 - 27209094
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||| ||||||||||||||||  |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  27208988 tgtttcgaaatgaatgtcactttcggtttccaatgcaataataactttttattttcaattgtaccattcaattaatattat-atacactacttccaaagt 27209086  T
Q  478 attatttt 485  Q
    ||||||||    
T  27209087 attatttt 27209094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 35848085 - 35847978
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||| ||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  35848085 tgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactactttcaaagt 35847986  T
Q  478 attatttt 485  Q
    ||||||||    
T  35847985 attatttt 35847978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 44108598 - 44108705
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||||||| ||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||||||| || |||||||||    
T  44108598 tgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaagt 44108697  T
Q  478 attatttt 485  Q
    ||||||||    
T  44108698 attatttt 44108705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 49468863 - 49468756
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||     
T  49468863 tgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaatactatattacactacttccaaagg 49468764  T
Q  478 attatttt 485  Q
    ||||||||    
T  49468763 attatttt 49468756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 15573606 - 15573717
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa----ttttttcttttcaattgtaccattcaattaatattatgttacactagttcca 473  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||    ||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  15573606 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttttttcttttcaattgtacccttcaattaatattatgttagactacttcca 15573705  T
Q  474 aagtattatttt 485  Q
    || |||||||||    
T  15573706 aaatattatttt 15573717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 10842781 - 10842886
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||  ||||||||||| ||||||||| || |||||||||||    
T  10842781 tttcaaaatgaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtactcttcaattaatactatgttacagtacttccaaagtat 10842880  T
Q  480 tatttt 485  Q
    ||||||    
T  10842881 tatttt 10842886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 26755219 - 26755325
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||  | |||||| ||||||||||||||| |||| ||||||||||| ||||| |||||| |||||||||    
T  26755219 tgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttcttttcaatt-tacccttcaattaatactatgtcacactacttccaaagt 26755317  T
Q  478 attatttt 485  Q
    ||||||||    
T  26755318 attatttt 26755325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 31491922 - 31491815
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||| |||||| ||||||| |||||||||||||||||| | ||||||||||| |||||||||||| || ||||||    
T  31491922 tgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttcttttcaattgtatccttcaattaatactatgttacactactttcaaagt 31491823  T
Q  478 attatttt 485  Q
    || |||||    
T  31491822 ataatttt 31491815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 31798588 - 31798695
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||| |||||||| ||||||| ||  |||||||| ||||||||||||||| |||| || |||||||| |||||||||||| |||||||||    
T  31798588 tgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaattataccttttaattaatactatgttacactacttccaaagt 31798687  T
Q  478 attatttt 485  Q
    ||||||||    
T  31798688 attatttt 31798695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 48009009 - 48009116
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||| || |||||||||  |||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||  |||||||||    
T  48009009 tgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattgtaccgttcaattaatactatgttacactgcttccaaagt 48009108  T
Q  478 attatttt 485  Q
    ||||||||    
T  48009109 attatttt 48009116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 34032232 - 34032156
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  34032232 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccgtccaattaata 34032156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 38531449 - 38531349
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| | || ||||||| ||| |||||||||||| || ||||||    
T  38531449 tgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatgcccttcaattgatactatgttacactactttcaaagt 38531350  T
Q  478 a 478  Q
    |    
T  38531349 a 38531349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 26595221 - 26595119
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||     
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaatactat-atacactatttccaaaga 26595123  T
Q  478 atta 481  Q
    ||||    
T  26595122 atta 26595119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 50249309 - 50249411
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||    
T  50249309 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttg-cacactacttccaaagt 50249407  T
Q  478 atta 481  Q
    ||||    
T  50249408 atta 50249411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 46045972 - 46046078
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| | ||| |||||||| ||||| ||||||||| |||| ||| ||||||| |||||||||||| || ||||||    
T  46045972 tgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttcaattatacccttcgattaatactatgttacactactttcaaagt 46046071  T
Q  478 attattt 484  Q
    |||||||    
T  46046072 attattt 46046078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 12591234 - 12591158
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  12591234 tgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaata 12591158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 26352233 - 26352157
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| | |||||||||    
T  26352233 tgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaccctccaattaata 26352157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 34047387 - 34047311
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  34047387 tgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgtaccctccaattaata 34047311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 16757346 - 16757240
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||| |||||||||| ||||||||||| |||||||| || ||||||||||||||||| ||||||||||| |||  ||||| | || ||||||    
T  16757346 tgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaatactat-atacacaactttcaaagt 16757248  T
Q  478 attatttt 485  Q
    ||||||||    
T  16757247 attatttt 16757240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 394 - 485
Target Start/End: Original strand, 43759347 - 43759438
Alignment:
Q  394 tcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| ||||| | ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | |||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttcttttcaattgtacccttcaattaataatatgttacactacttccaaaatgttatttt 43759438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 46554797 - 46554903
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||||| || |||||||| || |||||||| ||||| |||||||||||||| ||||||||||| |||  ||||||| |||||||||    
T  46554797 tgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttcaattgtacccttcaattaatactat-atacactacttccaaagt 46554895  T
Q  478 attatttt 485  Q
    ||||||||    
T  46554896 attatttt 46554903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 485
Target Start/End: Original strand, 34110535 - 34110633
Alignment:
Q  387 atgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||| |||||||| |||||| |||| ||| || ||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctttttaattgtacccttcaattattattatcttactctactttcaaagtattatttt 34110633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 40717445 - 40717372
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| |||||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaata 40717372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 25561025 - 25560918
Alignment:
Q  378 tgtttcaaaatgaatgtcactttt-agtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    ||||||||||| ||| | |||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||  ||||||| |||||||     
T  25561025 tgtttcaaaataaatattacttttcagtttccaatgcaataataattttttcttttcaattatacctttcaattaatactat-atacactacttccaaaa 25560927  T
Q  477 tattatttt 485  Q
    |||||||||    
T  25560926 tattatttt 25560918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 44258659 - 44258595
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  44258659 tgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacc 44258595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 49426565 - 49426460
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| |||||||||   ||||| ||||| |||||||||||||||||||||| ||||||  |||||||||| |||||||||||| ||||||| |    
T  49426565 tgtttcaaaataaatgtcactc--agttttcaatgcaataataattttttcttttcaactgtacccgtcaattaatactatgttacactacttccaaaat 49426468  T
Q  478 attatttt 485  Q
    ||| ||||    
T  49426467 attttttt 49426460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 13408417 - 13408310
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||| | ||||| ||||| ||||| |||||||| |||||||||||||||||||| || | || |||||||||||||||| |||||||      
T  13408417 tgttttaaaatgaattttactttcagttttcaatgcaataataactttttcttttcaattgtaccctttagttgatattatgttacactacttccaaatg 13408318  T
Q  478 attatttt 485  Q
    ||||||||    
T  13408317 attatttt 13408310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 39477859 - 39477754
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||||  ||||||||||| |||  ||||||| |||| ||||    
T  39477859 tgttttaaaatggatgtcacttttaatttccaatgcaataataatttttt-ttttcaattgtacacttcaattaatactat-atacactacttcctaagt 39477762  T
Q  478 attatttt 485  Q
    ||||||||    
T  39477761 attatttt 39477754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 44557196 - 44557121
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaat 453  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  44557196 tgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttcaattgtaccattcaattaat 44557121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 43358352 - 43358246
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||| |||||| ||||||| | ||| ||||| ||||||||  |||| |||||||||||||  ||||||||||| |||||||||||| |||| ||||    
T  43358352 tgtttcaatatgaatatcactttcacttttcaatgcaataataacattttattttcaattgtactcttcaattaatactatgttacactacttccgaagt 43358253  T
Q  478 attattt 484  Q
    |||||||    
T  43358252 attattt 43358246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 485
Target Start/End: Complemental strand, 2610964 - 2610876
Alignment:
Q  396 acttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||| ||||| ||||  ||||||||||||||||||||||||||| ||||||||||||||| |  ||||||| |||||||||||||||||    
T  2610964 actttcagttttcaatacaataataattttttcttttcaattgtaacattcaattaatattct-atacactacttccaaagtattatttt 2610876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 14593465 - 14593408
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacc 14593408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 25151821 - 25151915
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattattt 484  Q
    ||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||| ||||      |||||||||||||| ||||||||||||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttcttttcaattgtacccttca------attatgttacactacttccaaagtattattt 25151914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 481
Target Start/End: Original strand, 25487093 - 25487189
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||||||    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagtatta 25487189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 27720963 - 27721033
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||| | |||||||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttcttttcaattgtaccctccaattaata 27721033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 46286964 - 46286863
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    |||| |||||||||||| | ||| ||||| |||||||| |||||||||||||||| ||| ||||||||||| ||| |||||||| ||  ||||||| |||    
T  46286964 aaaaagaatgtcactttcatttttcaatgcaataataactttttcttttcaattgcacccttcaattaatactatattacactatttttaaagtatcatt 46286865  T
Q  484 tt 485  Q
    ||    
T  46286864 tt 46286863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 46271468 - 46271393
Alignment:
Q  379 gtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||  |||  |||||||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataattttttattttcaataatacacttcaattaata 46271393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 8895161 - 8895061
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||| ||||| ||||||| |||  ||||||||| ||| |||||||||| ||||||||| |||||||||||||||  ||||||| || |||| |||||||    
T  8895161 aaaataaatgttacttttaatttttaatgtaatagtaaatttttctttttaattgtacccttcaattaatattat-atacactattttcaaaatattatt 8895063  T
Q  484 tt 485  Q
    ||    
T  8895062 tt 8895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 451
Target Start/End: Original strand, 52706892 - 52706953
Alignment:
Q  390 aatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaatta 451  Q
    ||||||||||| |||||  |||||||||||||||||||||||| ||||||||| ||||||||    
T  52706892 aatgtcactttcagtttttaatgtaataataattttttctttttaattgtacccttcaatta 52706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 454
Target Start/End: Complemental strand, 31699409 - 31699365
Alignment:
Q  410 atgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  31699409 atgtaataataattttttcttttcaattgtacccttcaattaata 31699365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 49900910 - 49900803
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaa-tgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    ||||| ||||| ||||||||||| ||||| ||| |  |||||||| ||||| |||||||||||||| ||||||||||| |||  ||||||| || |||||    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataactttttattttcaattgtacctttcaattaataatat-atacactactttcaaag 49900812  T
Q  477 tattatttt 485  Q
    |||||||||    
T  49900811 tattatttt 49900803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 52024386 - 52024310
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||| ||||| | ||| ||||| ||||| |||||||| |||||||||||||||||||| | |||||||||    
T  52024386 tgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttcttttcaattgtaccctccaattaata 52024310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 12484780 - 12484678
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| ||| ||| | || |||||  |||||||| ||||||||||||| |||||| | |||||||||||| |  |||||| |||||||||    
T  12484780 tgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaactgtaccctccaattaatatta-ggcacactacttccaaagt 12484682  T
Q  478 atta 481  Q
    ||||    
T  12484681 atta 12484678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 18794693 - 18794588
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||| ||| |||||| |||| |||||||| |||||||||||| ||| ||| |||||||||||||||  ||||||| ||||||| |    
T  18794693 tgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaatattat-atacactacttccaaaat 18794596  T
Q  478 attatttt 485  Q
    ||| ||||    
T  18794595 attctttt 18794588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 24483387 - 24483450
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtac 441  Q
    ||||||||||||||||||| ||| ||||||||||  |||||||| | |||||||||||||||||    
T  24483387 tgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttcttttcaattgtac 24483450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 467
Target Start/End: Original strand, 24884420 - 24884503
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacacta 467  Q
    ||||| ||||||||||| | ||||||||| |||||||| ||||| ||||||||| |||| ||||||||||| || ||| |||||    
T  24884420 aaaataaatgtcactttcaatttccaatgcaataataactttttattttcaattatacccttcaattaatactaagtttcacta 24884503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 49403023 - 49402921
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||| ||  ||| ||||||||||| |||||||| |||||||||||||||||||  | ||||||||||| ||  ||| || |||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttcttttcaattgtactctccaattaatattttg-cacattacttccaaagt 49402925  T
Q  478 atta 481  Q
    ||||    
T  49402924 atta 49402921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 14373559 - 14373459
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||| ||| ||||||||||| || ||||| ||||| ||||||||| |||| | ||||||||| | ||  |||||| || ||||||||||||    
T  14373559 aaaatgaatgtcattttcagtttccaatgcaacaataactttttattttcaattataccctccaattaataatctg-cacactactttcaaagtattatt 14373461  T
Q  484 tt 485  Q
    ||    
T  14373460 tt 14373459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 476
Target Start/End: Complemental strand, 52066396 - 52066343
Alignment:
Q  423 tttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| || |||||    
T  52066396 tttttcttttcaattgtacccttcaattaatattatattacactactttcaaag 52066343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 7191359 - 7191283
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||| |||||||||||   ||| | |||||||||||| ||||||||||||||| |||| |||||||||||    
T  7191359 tgttttaaaataaatgtcactttcgattttctatgtaataataactttttcttttcaattatacctttcaattaata 7191283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 480
Target Start/End: Complemental strand, 7214185 - 7214086
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||||||   |||| ||||| |||||||| |||||||||| |||| |||  ||||||||||| |||||||||||| || |||| |    
T  7214185 tgttttaaaataaatgtcactt---gttttcaatgcaataataaatttttctttttaattatacgcttcaattaatactatgttacactattttcaaaat 7214089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 451
Target Start/End: Original strand, 30292939 - 30293012
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaatta 451  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||| ||| | ||||||| |||||| | ||||||    
T  30292939 tgttttaaaatgaatgccactttcagtttccaatgcaataataactttgttttttcaactgtaccctccaatta 30293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 481
Target Start/End: Complemental strand, 33622511 - 33622415
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||||| |||   ||| ||||| |||||||| ||| |||||||||||||||  || | ||||||||||| ||||||| ||| |||||||||    
T  33622511 aaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattgtactctttagttaatattatg-tacactacttctaaagtatta 33622415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 39125647 - 39125723
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||| ||||| ||| ||||| ||||| |||||||| ||||||||| || || |||| |||||| ||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctttccagttctacccttcaatcaata 39125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 38947654 - 38947706
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttt 431  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||| |||||||||||    
T  38947654 tgttttaaaatgaatgtcactttcagtatccaatgcaataat-attttttcttt 38947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 4985 - 5017
Alignment:
Q  415 ataataattttttcttttcaattgtaccattca 447  Q
    ||||||| |||||||||||||||||||||||||    
T  4985 ataataactttttcttttcaattgtaccattca 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 45082052 - 45081947
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||    
T  45082052 tttcacaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaagcat 45081953  T
Q  480 tatttt 485  Q
    ||||||    
T  45081952 tatttt 45081947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 6220558 - 6220451
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |    
T  6220558 tgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaactgtacctttcaattaatattatgttacactacttccaaatt 6220459  T
Q  478 attatttt 485  Q
    ||||||||    
T  6220458 attatttt 6220451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 29396834 - 29396727
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  29396834 tgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttacactacttccaaagt 29396735  T
Q  478 attatttt 485  Q
    ||||||||    
T  29396734 attatttt 29396727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 4288865 - 4288758
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| ||||||  |||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  4288865 tgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttcttttcaattgcaccattcaattaatactatgttacactacttccaaagt 4288766  T
Q  478 attatttt 485  Q
    ||||||||    
T  4288765 attatttt 4288758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 12342092 - 12342199
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |    
T  12342092 tgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaat 12342191  T
Q  478 attatttt 485  Q
    ||||||||    
T  12342192 attatttt 12342199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 13561993 - 13562100
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| |||||| |||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  13561993 tgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatgttatgttacactacttccaaagt 13562092  T
Q  478 attatttt 485  Q
    ||||||||    
T  13562093 attatttt 13562100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 384 - 483
Target Start/End: Original strand, 42004896 - 42004995
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  42004896 aaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattgtacccttcaattaatattatgttacactacttccaaagtattatt 42004995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 378 - 486
Target Start/End: Complemental strand, 12566134 - 12566027
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||  |||||||||    
T  12566134 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtaccattcaattaatattat-atacactgcttccaaagt 12566036  T
Q  478 attattttg 486  Q
    || ||||||    
T  12566035 ataattttg 12566027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 441385 - 441278
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||||||  |||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||| | |||||||||    
T  441385 tgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaccacttccaaagt 441286  T
Q  478 attatttt 485  Q
    ||||||||    
T  441285 attatttt 441278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 4133023 - 4133128
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||  ||||| |||||||||||| |||||||||    
T  4133023 tgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttca--taatactatgttacactacttccaaagt 4133120  T
Q  478 attatttt 485  Q
    ||||||||    
T  4133121 attatttt 4133128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 29808811 - 29808918
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| ||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||    
T  29808811 tgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttcttttcaatcgtacccttcacttaatattatgttacactacttccaaagt 29808910  T
Q  478 attatttt 485  Q
    ||||||||    
T  29808911 attatttt 29808918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 38926605 - 38926712
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||| || || |||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  38926605 tgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaatactatgttacactacttccaaagt 38926704  T
Q  478 attatttt 485  Q
    ||||||||    
T  38926705 attatttt 38926712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 30855105 - 30855210
Alignment:
Q  379 gtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagta 478  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||  |    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataatttt-tcttttcaattgtaccatttaattaatactatgttacactacttccaaaaca 30855203  T
Q  479 ttatttt 485  Q
    |||||||    
T  30855204 ttatttt 30855210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 16807671 - 16807567
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||| ||||| | ||||||||     
T  16807671 tgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacaatggtacaccacttccaaaga 16807572  T
Q  478 attat 482  Q
    |||||    
T  16807571 attat 16807567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 16846952 - 16846848
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||| ||||| | ||||||||     
T  16846952 tgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacaatggtacaccacttccaaaga 16846853  T
Q  478 attat 482  Q
    |||||    
T  16846852 attat 16846848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 18579166 - 18579272
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||| |||  ||||||| |||||||||    
T  18579166 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaatactat-atacactacttccaaagt 18579264  T
Q  478 attatttt 485  Q
    || |||||    
T  18579265 ataatttt 18579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 25383638 - 25383536
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||| | ||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  25383638 tgttttaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaatattatgttacactactttcaaagt 25383540  T
Q  478 atta 481  Q
    ||||    
T  25383539 atta 25383536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 4051858 - 4051755
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataatt-ttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| | ||||||||| |||| ||||||| || |||||    
T  4051858 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttcaattgtaccttccaattaatactatg-tacactactttcaaag 4051760  T
Q  477 tatta 481  Q
    |||||    
T  4051759 tatta 4051755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 27964524 - 27964448
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaata 27964448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 32228165 - 32228058
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||||||||| ||||  |||| |||||||| |||||||||||| ||||||| ||||||||||| ||||||||| || || ||||||    
T  32228165 tgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttcttttcagttgtacccttcaattaatactatgttacaatactttcaaagt 32228066  T
Q  478 attatttt 485  Q
    ||||||||    
T  32228065 attatttt 32228058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 43427441 - 43427335
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  || ||| |||||||||    
T  43427441 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttg-cacgctacttccaaagt 43427343  T
Q  478 attatttt 485  Q
    ||||||||    
T  43427342 attatttt 43427335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 485
Target Start/End: Complemental strand, 18719579 - 18719480
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattattt 484  Q
    |||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||| || |||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactattttcaaagtattattt 18719481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 4658387 - 4658285
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||  ||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||| || ||||||    
T  4658387 tgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactat-atacactactttcaaagt 4658289  T
Q  478 atta 481  Q
    ||||    
T  4658288 atta 4658285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 17695979 - 17695877
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||    
T  17695979 tgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagt 17695881  T
Q  478 atta 481  Q
    ||||    
T  17695880 atta 17695877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 34546485 - 34546410
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaat 453  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  34546485 tgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttaaattgtacccttcaattaat 34546410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 12394075 - 12393966
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgt--tacactagttccaaa 475  Q
    ||||||||||||||||| ||||| |||||| |||| |||||||| ||||| |||| ||||||||| |||||||||||||||||  ||||||| || ||||    
T  12394075 tgtttcaaaatgaatgttactttcagtttctaatgcaataataactttttatttttaattgtacccttcaattaatattatgttatacactattttcaaa 12393976  T
Q  476 gtattatttt 485  Q
    ||| ||||||    
T  12393975 gtaatatttt 12393966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 378 - 451
Target Start/End: Original strand, 43971503 - 43971576
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaatta 451  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| || ||||||||    
T  43971503 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtgcccttcaatta 43971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 458
Target Start/End: Original strand, 29411695 - 29411775
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||| ||||||||| |||||||||||||||    
T  29411695 tgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctttttaattgtacccttcaattaatattat 29411775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 36177975 - 36178051
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||||||||  |||||||||| |||||||| ||||| |||||||||||||| |||||||||||    
T  36177975 tgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattgtacccttcaattaata 36178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 45301764 - 45301840
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  45301764 tgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccatcaattaata 45301840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 394 - 485
Target Start/End: Original strand, 1423206 - 1423297
Alignment:
Q  394 tcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| ||||| ||||| |||||||| || |||||||||||| |||| ||||||||||| |||||||||||| ||||||| |||||||||    
T  1423206 tcactttcagttttcaatggaataataacttattcttttcaattatacccttcaattaatagtatgttacactacttccaaaatattatttt 1423297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 7028966 - 7028860
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| | ||||||||| |||||| | ||||||||||||| |||||| ||||||||||| |||  ||||||| || ||||||    
T  7028966 tgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttcaaatgtacccttcaattaatactat-atacactactttcaaagt 7028868  T
Q  478 attatttt 485  Q
    ||||||||    
T  7028867 attatttt 7028860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 8540037 - 8540143
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||| || ||| |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  8540037 tgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctttttaattgtacccttcaattaatattat-ttacactacttctaaaat 8540135  T
Q  478 attatttt 485  Q
    ||||||||    
T  8540136 attatttt 8540143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 35799202 - 35799303
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||||||||||| | ||||||||||||||  |||||| || ||||||    
T  35799202 tgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt-ttttcaattgtaccctccaattaatattatg-cacactactttcaaagt 35799299  T
Q  478 atta 481  Q
    ||||    
T  35799300 atta 35799303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 440
Target Start/End: Original strand, 16792482 - 16792544
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgta 440  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  16792482 tgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgta 16792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 22620488 - 22620412
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||| |||| |||| ||||||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  22620488 tgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaata 22620412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 33482383 - 33482307
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||  |||||||||||    
T  33482383 tgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttcttttcaactgtactcttcaattaata 33482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 7644651 - 7644722
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatat 455  Q
    ||||||||||||||||| ||| | |||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  7644651 aaaatgaatgtcactttcagtattcaatataataataactttttcttttcaattgtacccttcaattaatat 7644722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 16463180 - 16463110
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaata 16463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 37038920 - 37038817
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||    ||||||||||||||| |||| |||||||||||||||  ||||||| || ||||||    
T  37038920 tgttttaaaatgaatgtcactttcagttttcaatgcaataac---tttttcttttcaattatacccttcaattaatattat-atacactactttcaaagt 37038825  T
Q  478 attatttt 485  Q
    ||||||||    
T  37038824 attatttt 37038817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 458
Target Start/End: Original strand, 4469500 - 4469580
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||| ||||||||| ||||||| ||||| ||||  |||||||| |||||||||||||||||||| || ||||||||||||    
T  4469500 tgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattgtacccttaaattaatattat 4469580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 5717512 - 5717576
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctttttaattgtacc 5717576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 8774055 - 8774159
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||| || |||||||||||||||  |||||||| | |  ||||||||||||||  |||||||||||  ||||||||||| |||||||||    
T  8774055 tgtttaaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatac-atgttacactacttccaaagt 8774151  T
Q  478 attatttt 485  Q
    ||||||||    
T  8774152 attatttt 8774159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 8789580 - 8789476
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||| || |||||||||||||||  |||||||| | |  ||||||||||||||  |||||||||||  ||||||||||| |||||||||    
T  8789580 tgttttaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatac-atgttacactacttccaaagt 8789484  T
Q  478 attatttt 485  Q
    ||||||||    
T  8789483 attatttt 8789476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 480
Target Start/End: Complemental strand, 11188644 - 11188545
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||| ||||| ||||| || ||||| || || |||||||||||| ||||||||||||  |||  ||||||| |||||||||||    
T  11188644 tttcaaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttcaattgtatcattcaattaatcctat-atacactacttccaaagtat 11188546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 36685894 - 36685818
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||| ||||| | |||| |||  ||||||||||||||||||||||||||||| |||||||||||    
T  36685894 tgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtacccttcaattaata 36685818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 7874791 - 7874722
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||| ||||| |||||||||||    
T  7874791 aaaattaatgtcactttt-gtttccaatgcaataataactttttcttttcaatcgtacccttcaattaata 7874722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 9391710 - 9391632
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||||||||||||||| ||| |||||  |||| ||||||||||||||||||||||||||  | || ||||||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttcttttcaattgtgacctttaattaatattat 9391632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 14285939 - 14286013
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||| ||| ||||||||||  |||||||| ||||| |||||||||||||| | |||||||||    
T  14285939 tttcaaaatgaatgtcattttcagtttccaatacaataataacttttttttttcaattgtaccctccaattaata 14286013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 36106553 - 36106450
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||||  ||||||||| |||  ||| ||||||||||||     ||| ||||||||||| |||||||||||| |||||| ||    
T  36106553 tgttttaaaatgaatgtcacttttgttttccaatgcaatgctaactttttcttttcac----acccttcaattaatactatgttacactacttccaatgt 36106458  T
Q  478 attatttt 485  Q
    ||||||||    
T  36106457 attatttt 36106450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 19164358 - 19164462
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    |||||||||||||| || ||| | |||  |||| |||||||| |||||||||| ||||||| | |||||||||||||||  ||||||| || ||||||||    
T  19164358 tttcaaaatgaatggcaatttcaatttttaatgcaataataactttttctttttaattgtatccttcaattaatattat-atacactactttcaaagtat 19164456  T
Q  480 tatttt 485  Q
    ||||||    
T  19164457 tatttt 19164462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 7042340 - 7042234
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| | || |||||| |||||| | |||||||||| || |||||| ||||||||||| |||  ||||||| || ||||||    
T  7042340 tgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttttaaatgtacccttcaattaatactat-atacactactttcaaagt 7042242  T
Q  478 attatttt 485  Q
    ||| ||||    
T  7042241 attctttt 7042234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 485
Target Start/End: Original strand, 19469575 - 19469629
Alignment:
Q  430 tttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  19469575 tttcaattgtaccattcaattaatattat-atacattagttccaaagtattatttt 19469629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 485
Target Start/End: Original strand, 42743080 - 42743135
Alignment:
Q  430 tttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| | |||||||||||||||||||||||| || ||||||||| ||||    
T  42743080 tttcaattgtatccttcaattaatattatgttacactactttcaaagtattttttt 42743135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 460
Target Start/End: Original strand, 17703018 - 17703100
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgt 460  Q
    ||||| ||||||||||||||||| | ||| ||||| |||||||| ||||||||| | ||||||  || |||||||||| ||||    
T  17703018 tgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctttccgattgtataatccaattaatataatgt 17703100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 483
Target Start/End: Original strand, 42753756 - 42753850
Alignment:
Q  390 aatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||| ||||| |||||  ||||||| |||||| |||| |||||||   ||||||||||  |||||||||||| |||||||||| ||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttttatttttaattgtattcttcaattaatgctatgttacactacttccaaagtactatt 42753850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 10195573 - 10195642
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattca 447  Q
    ||||| ||||||||||| ||||||| ||| ||||| ||||||||  |||| |||||||||||||| ||||    
T  10195573 tgttttaaaatgaatgttacttttaattttcaatgcaataataacattttattttcaattgtacccttca 10195642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 455
Target Start/End: Original strand, 35046517 - 35046594
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatat 455  Q
    ||||| || |||||||||||||| | ||||||||| |||||||| ||||  |||| |||| |||| ||||||||||||    
T  35046517 tgttttaagatgaatgtcactttcaatttccaatgcaataataacttttaatttttaattatacccttcaattaatat 35046594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 15083306 - 15083230
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||| ||| |||||| | ||| ||||||||||| ||||||||  |||| |||||||||||||  |||||||||||    
T  15083306 tgtttcgaaaagaatgttattttcagtttccaatgcaataataacattttattttcaattgtactcttcaattaata 15083230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 32254592 - 32254639
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttt 426  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  32254592 tgtttcaaaatgaa-gtcactttcagtttccaatgaaataataattttt 32254639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 45423618 - 45423719
Alignment:
Q  379 gtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagta 478  Q
    |||| ||||||| ||| | ||| ||||||||||| |||||||| ||||||||||||| | | || |  |||||||| ||||  |||||| ||||||||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttcttttcaaatattccctcgaattaatactatg-cacactacttccaaagta 45423716  T
Q  479 tta 481  Q
    |||    
T  45423717 tta 45423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 43481025 - 43480917
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagt-ttccaatgta-ataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaa 475  Q
    ||||||||||||| ||||| ||| ||| || ||||| | ||||||| ||||||||||||||| |||| || |||||||| | |  ||||| | |||||||    
T  43481025 tgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttcttttcaattataccttttaattaatact-ttatacacaacttccaaa 43480927  T
Q  476 gtattatttt 485  Q
    ||||||||||    
T  43480926 gtattatttt 43480917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 777769 - 777879
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa--ttttttcttttcaattgtaccattcaattaatattat--gttacactagttcca 473  Q
    ||||| ||||||||||||| ||| | |||| |||| ||||||||  |||||||| ||||| |||||| |||||| |||| |||    ||||||| |||||    
T  777769 tgttttaaaatgaatgtcattttcaatttctaatgcaataataaccttttttctgttcaaatgtacccttcaatcaatactattatatacactacttcca 777868  T
Q  474 aagtattattt 484  Q
    || ||||||||    
T  777869 aaatattattt 777879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 13788498 - 13788605
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttc-aattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    |||| |||||| ||||||| ||| | |||| |||| |||| ||||| ||||||||| ||||||| ||| | |||||||||||| |||  || |||||||     
T  13788498 tgttccaaaataaatgtcattttcaatttctaatgcaatattaattatttcttttccaattgtatcatgctattaatattatg-taccatacttccaaaa 13788596  T
Q  477 tattatttt 485  Q
    |||||||||    
T  13788597 tattatttt 13788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 28072566 - 28072671
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataa---ttttttcttttcaattgtaccattcaattaatattatgttacactagttccaa 474  Q
    ||||| ||||||||||||||||| ||||| ||||  ||||||||   |||||| |||||||| ||| | | ||||||||| | | | |||||| ||||||    
T  28072566 tgttttaaaatgaatgtcactttcagttttcaatacaataataactttttttttttttcaatcgtatcctccaattaatactct-tcacactacttccaa 28072664  T
Q  475 agtatta 481  Q
    |||||||    
T  28072665 agtatta 28072671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 4989477 - 4989584
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  4989477 tgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttacaaagt 4989576  T
Q  478 attatttt 485  Q
    ||||||||    
T  4989577 attatttt 4989584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 9304787 - 9304680
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||||||| |    
T  9304787 tgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatgttatgttatactacttccaaaat 9304688  T
Q  478 attatttt 485  Q
    ||||||||    
T  9304687 attatttt 9304680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 39698820 - 39698713
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||| || ||||||| |    
T  39698820 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacattacttccaaaat 39698721  T
Q  478 attatttt 485  Q
    ||||||||    
T  39698720 attatttt 39698713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 40228573 - 40228680
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||| || |||||||||    
T  40228573 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacatttcaattaatattatgttacattacttccaaagt 40228672  T
Q  478 attatttt 485  Q
    ||||||||    
T  40228673 attatttt 40228680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 4760712 - 4760605
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| | ||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  4760712 tgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 4760613  T
Q  478 attatttt 485  Q
    ||||||||    
T  4760612 attatttt 4760605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 7839457 - 7839564
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||| |    
T  7839457 tgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaattttacctttcaattaatattatgttacactacttccaaaat 7839556  T
Q  478 attatttt 485  Q
    ||||||||    
T  7839557 attatttt 7839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 9880655 - 9880548
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||| | || ||||||||||| |||||||||||| |||||||||    
T  9880655 tgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttcttttcaattatgcccttcaattaatactatgttacactacttccaaagt 9880556  T
Q  478 attatttt 485  Q
    ||||||||    
T  9880555 attatttt 9880548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 17920955 - 17921062
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |||||||||    
T  17920955 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttacaattgtactcttcaattaatattatgttacactacttccaaagt 17921054  T
Q  478 attatttt 485  Q
    ||||||||    
T  17921055 attatttt 17921062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 31693775 - 31693669
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||| ||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  31693775 tgttttaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacacta-ttccaaagt 31693677  T
Q  478 attatttt 485  Q
    ||||||||    
T  31693676 attatttt 31693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 39463258 - 39463364
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||| |||||||||    
T  39463258 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaagt 39463356  T
Q  478 attatttt 485  Q
    ||||||||    
T  39463357 attatttt 39463364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 385 - 482
Target Start/End: Complemental strand, 31899395 - 31899298
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  31899395 aaatggatatcactttcagtttccaatgcaataataattttttcttttcaattgtactcttcaattaatattatgttacactacttccaaagtattat 31899298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 485
Target Start/End: Complemental strand, 5295556 - 5295454
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||| |||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatattat-atacactacttccaaaatatta 5295458  T
Q  482 tttt 485  Q
    ||||    
T  5295457 tttt 5295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 43084775 - 43084674
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||  ||||||    
T  43084775 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactacttccaaaaaattatt 43084676  T
Q  484 tt 485  Q
    ||    
T  43084675 tt 43084674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 6374413 - 6374518
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||  |||| || |||||||||    
T  6374413 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacc-ttcaattaatattat-atacattacttccaaagt 6374510  T
Q  478 attatttt 485  Q
    ||||||||    
T  6374511 attatttt 6374518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 43448715 - 43448822
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || |||||| || || ||||||    
T  43448715 tgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaatactacgttacattactttcaaagt 43448814  T
Q  478 attatttt 485  Q
    ||||||||    
T  43448815 attatttt 43448822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 378 - 480
Target Start/End: Original strand, 19438235 - 19438337
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||| |||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| |||||||| ||||||| |    
T  19438235 tgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaat 19438334  T
Q  478 att 480  Q
    |||    
T  19438335 att 19438337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 29025900 - 29025796
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||| ||||||||||   |||||| ||    
T  29025900 tgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaattctacccttcaattaatactatgttacac---ttccaatgt 29025804  T
Q  478 attatttt 485  Q
    ||||||||    
T  29025803 attatttt 29025796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 19574385 - 19574493
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttc-caatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    |||||| |||| ||||||||| | |||||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||| |||||||| |||||||     
T  19574385 tgtttcgaaataaatgtcactctcagtttcgcaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaa 19574484  T
Q  477 tattatttt 485  Q
    |||||||||    
T  19574485 tattatttt 19574493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 34796832 - 34796728
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||  ||   ||||||| |||||||||    
T  34796832 tgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttcttttcaattgaacccttcaattaattata---tacactacttccaaagt 34796736  T
Q  478 attatttt 485  Q
    ||||||||    
T  34796735 attatttt 34796728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 15160600 - 15160524
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  15160600 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaata 15160524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 35356308 - 35356391
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttac 463  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttac 35356391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 44713533 - 44713640
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||| ||||||| | ||||||||| |||||||| ||||| ||||||||| |||| ||||||||||||| |||||||||| || |||| |    
T  44713533 tgttttaaaatgaatatcactttcattttccaatgcaataataacttttttttttcaattatacccttcaattaatattgtgttacactactttcaaaat 44713632  T
Q  478 attatttt 485  Q
    ||||||||    
T  44713633 attatttt 44713640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 45359048 - 45358942
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||| ||||| ||| | ||| ||||| |||||||||||||||||||||||||||   |||||||||||||||  ||||||| |||||||||    
T  45359048 tgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattgtatttttcaattaatattat-atacactacttccaaagt 45358950  T
Q  478 attatttt 485  Q
    ||||||||    
T  45358949 attatttt 45358942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 40400441 - 40400505
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttcttttcaattgtacc 40400505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 34156539 - 34156640
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataatttt-ttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||||||| ||||||   |||||||||| |||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| ||||||| ||||||    
T  34156539 aaaatgaatatcacttacggtttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatg-tacactacttccaaaatattat 34156637  T
Q  483 ttt 485  Q
    |||    
T  34156638 ttt 34156640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 43974943 - 43974886
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaatt 437  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaatt 43974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 458
Target Start/End: Original strand, 9812172 - 9812252
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||| ||||||||||||||||| |||||| |||| |||||||| ||||| |||||||||||||| ||||| |||||||||    
T  9812172 tgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattgtacctttcaagtaatattat 9812252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 514879 - 514949
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||||| | |||||||||||    
T  514879 aaaatgaatgtcactttcaattttcaatgcaataataattttttcttttcaattgtatccttcaattaata 514949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 40400124 - 40400066
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  40400124 aaaatgaatgtgacttttagtttccaatgcaacaataattttttcttttcaattgtacc 40400066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 43724380 - 43724457
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttctt-ttcaattgtaccattcaattaata 454  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||| || |||||||||||| | |||||||||    
T  43724380 tgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttcttcaattgtaccttccaattaata 43724457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 37559687 - 37559611
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||| ||||||||||| ||||||||||  |||||||| |||||||||||||||||||| | |||||||||    
T  37559687 tgttttaaaatcaatgtcactttcagtttccaatacaataataactttttcttttcaattgtaccctccaattaata 37559611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 40362434 - 40362510
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||| |||| | |||||||||    
T  40362434 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattttaccctccaattaata 40362510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 39766013 - 39765912
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| | |||||| | ||||||||| | ||  |||||| |||||||||    
T  39766013 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc-actgtaccctccaattaatactctg-cacactacttccaaagt 39765916  T
Q  478 atta 481  Q
    ||||    
T  39765915 atta 39765912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 36921362 - 36921432
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||| |||||||| | ||| ||||| ||||||||||||||||||||||||||||| | |||||||||    
T  36921362 aaaatgaacgtcactttcaattttcaatgcaataataattttttcttttcaattgtaccttccaattaata 36921432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 13368076 - 13367996
Alignment:
Q  404 tttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| | ||||||||  ||||||||||||||| ||| |||||||||||||||  ||||||| |||||||||||||||||    
T  13368076 tttccaacgcaataataacattttcttttcaattgcacccttcaattaatattat-atacactacttccaaagtattatttt 13367996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 14234372 - 14234263
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatta-tgt-tacactagttccaaa 475  Q
    ||||| ||||||||||||||||||| |||| |||| ||||||||| |||| |||||||||||||| || | |||||| || | | ||||||| |||||||    
T  14234372 tgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattgtaccctttagttaataatactatatacactacttccaaa 14234273  T
Q  476 gtattatttt 485  Q
     |||||||||    
T  14234272 atattatttt 14234263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 483
Target Start/End: Original strand, 13496240 - 13496338
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||| | ||| | ||||||||| ||||||||  |||||||||||||||||| |||||||||||| | |  ||||||| |||||||||| ||||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttcttttcaattgtacaattcaattaatactgt-atacactacttccaaagtagtatt 13496338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 15227566 - 15227672
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| |  || ||||| |||||||| | |||||||||||| ||||  ||||||||||| |||  ||||| | || ||||||    
T  15227566 tgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttcttttcaatggtacacttcaattaatactat-atacacaactttcaaagt 15227664  T
Q  478 attatttt 485  Q
    ||||||||    
T  15227665 attatttt 15227672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 396368 - 396303
Alignment:
Q  378 tgtttcaaaatgaatgtcactttt-agtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||| |||||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||||    
T  396368 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttcaattgtacc 396303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 485
Target Start/End: Complemental strand, 5790772 - 5790695
Alignment:
Q  408 caatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||||||||   |||||||||||||| || | ||||||||||||||| |||||||| || |||| |||||||||    
T  5790772 caatgtaataatagccttttcttttcaattttatccttcaattaatattatcttacactactttcaaaatattatttt 5790695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 44342916 - 44342865
Alignment:
Q  402 agtttccaatgtaataataattttttcttttcaattgtaccattcaattaat 453  Q
    |||||||||| ||||||||| |||||||||||||||||||| || |||||||    
T  44342916 agtttccaatataataataactttttcttttcaattgtaccctttaattaat 44342865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 29312341 - 29312271
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||| ||| ||||||||||| ||||||||   ||| |||||||||||||  |||||||||||    
T  29312341 aaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattgtactcttcaattaata 29312271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 6116159 - 6116095
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtacc 442  Q
    ||||| ||||||||| |||||||  |||| ||||| |||||||| ||||||||||||||| ||||    
T  6116159 tgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaattatacc 6116095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 17655907 - 17655982
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||| ||||| || || ||||| ||||| |||||||| ||||||||||||| |||||| | |||||||||    
T  17655907 tgtttcaaaat-aatgttaccttcagttttcaatgcaataataactttttcttttcaactgtaccctccaattaata 17655982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 458
Target Start/End: Complemental strand, 31234084 - 31234013
Alignment:
Q  387 atgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgta-ccattcaattaatattat 458  Q
    ||||||||||||||||||||  |||| |||||||| || || |||||||||||| || |||||||||||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataacttctt-ttttcaattgtatcctttcaattaatattat 31234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 440
Target Start/End: Original strand, 1511495 - 1511550
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgta 440  Q
    |||||||||||||||||| ||| ||||  |||| ||||||| ||||||||||||||    
T  1511495 aaatgaatgtcacttttatttttcaatacaatattaattttctcttttcaattgta 1511550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 412
Target Start/End: Original strand, 32414726 - 32414760
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatg 412  Q
    ||||||||||||||||||| |||||||||||||||    
T  32414726 tgtttcaaaatgaatgtcatttttagtttccaatg 32414760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 42880086 - 42879979
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||     
T  42880086 tgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaga 42879987  T
Q  478 attatttt 485  Q
    ||||||||    
T  42879986 attatttt 42879979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 1741990 - 1742097
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  1741990 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 1742089  T
Q  478 attatttt 485  Q
    ||||||||    
T  1742090 attatttt 1742097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 13405279 - 13405172
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  13405279 tgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 13405180  T
Q  478 attatttt 485  Q
    ||| ||||    
T  13405179 attgtttt 13405172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 22297995 - 22298102
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||| |||| |||||| |||||||||||| |||||||||    
T  22297995 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaactgtacccttcagttaatactatgttacactacttccaaagt 22298094  T
Q  478 attatttt 485  Q
    ||||||||    
T  22298095 attatttt 22298102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 41137727 - 41137834
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||    
T  41137727 tgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattgatactatgttacactacttccaaagt 41137826  T
Q  478 attatttt 485  Q
    | ||||||    
T  41137827 aatatttt 41137834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 45948782 - 45948675
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||| || ||||||| |    
T  45948782 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacattacttccaaaat 45948683  T
Q  478 attatttt 485  Q
    ||||||||    
T  45948682 attatttt 45948675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 31418665 - 31418558
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| |||  |||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  31418665 tgtttcaaaataaattccactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagt 31418566  T
Q  478 attatttt 485  Q
    ||||||||    
T  31418565 attatttt 31418558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 33939886 - 33939784
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  33939886 tgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattgtaccattcaattaatattat-atacactaattccaaagt 33939788  T
Q  478 atta 481  Q
    ||||    
T  33939787 atta 33939784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 385 - 485
Target Start/End: Complemental strand, 29531080 - 29530980
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattattt 484  Q
    |||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| | || |||||||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacaccactttcaaagtattattt 29530981  T
Q  485 t 485  Q
    |    
T  29530980 t 29530980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 37815723 - 37815830
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||| |||| | ||||||||  |||||||||||||||||||||||| |||| ||||||||||| |||||||||||| || ||||||    
T  37815723 tgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaattatacccttcaattaatactatgttacactactttcaaagt 37815822  T
Q  478 attatttt 485  Q
    ||||||||    
T  37815823 attatttt 37815830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 485
Target Start/End: Original strand, 48684726 - 48684829
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    |||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || ||||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacaccactttcaaagtatta 48684825  T
Q  482 tttt 485  Q
    ||||    
T  48684826 tttt 48684829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 27947647 - 27947546
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||| || |||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatattatgctacactacttccaaaggatgatt 27947548  T
Q  484 tt 485  Q
    ||    
T  27947547 tt 27947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 40753574 - 40753474
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| || ||||||||||||    
T  40753574 aaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactat-atacactactttcaaagtattatt 40753476  T
Q  484 tt 485  Q
    ||    
T  40753475 tt 40753474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 44453141 - 44453241
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattattt 484  Q
    |||||||||||||||| ||||||||||| |||||||| ||| | |||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaatactatgttacactacttctaaagtattattt 44453240  T
Q  485 t 485  Q
    |    
T  44453241 t 44453241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 716015 - 715913
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||| | || | ||||| |||||||||    
T  716015 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatactctgct-cactacttccaaagt 715917  T
Q  478 atta 481  Q
    ||||    
T  715916 atta 715913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 484
Target Start/End: Original strand, 10476141 - 10476240
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||| |||||||||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaagtattatt 10476239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 10599212 - 10599315
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| ||||||| ||||| ||||| |||||||| |||||||||||||||||||  ||| ||||||  |||||||||||| |||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacttttctattaatgctatgttacactacttccaaagt 10599311  T
Q  478 atta 481  Q
    ||||    
T  10599312 atta 10599315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 12977838 - 12977736
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||||| ||||||||| | ||  |||||| |||||||||    
T  12977838 tgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctg-cacactacttccaaagt 12977740  T
Q  478 atta 481  Q
    ||||    
T  12977739 atta 12977736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 24680127 - 24680234
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| || |||||||  |||||| || || |||||||||    
T  24680127 tgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctttaattaatgctatgttgcattacttccaaagt 24680226  T
Q  478 attatttt 485  Q
    ||||||||    
T  24680227 attatttt 24680234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 35777818 - 35777925
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| |||||||||||  ||||| |||| |||||||| ||||| |||||||||||||| |||||||| || ||| |||||||| |||||||||    
T  35777818 tgtttcaaaataaatgtcactttcggtttctaatgcaataataactttttattttcaattgtacccttcaattagtactatattacactacttccaaagt 35777917  T
Q  478 attatttt 485  Q
    ||||||||    
T  35777918 attatttt 35777925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 382 - 485
Target Start/End: Original strand, 37490787 - 37490892
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgt--tacactagttccaaagtat 479  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||| ||  |||||||    
T  37490787 tcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaatactatatagtacactacttggaaagtat 37490886  T
Q  480 tatttt 485  Q
    ||||||    
T  37490887 tatttt 37490892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 30312463 - 30312563
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    |||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||||| ||||||||||||| |  ||||||| |||||||||||||||    
T  30312463 aaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattgtacccttcaattaatattgt-atacactacttccaaagtattatt 30312561  T
Q  484 tt 485  Q
    ||    
T  30312562 tt 30312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 21752260 - 21752157
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    |||||||| ||||||| ||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||  ||||||| || |||||||||    
T  21752260 ttcaaaataaatgtcattttcagtttccaatgcaataataactttttcgtttcaattgtaccattcaattaacattat-atacactattttcaaagtatt 21752162  T
Q  481 atttt 485  Q
    |||||    
T  21752161 atttt 21752157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 27935766 - 27935873
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| | |||||||||| |||| |||||||| || |||| |||| |||||||||    
T  27935766 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttatcttcaattgtatcatttaattaatactacgttaaactacttccaaagt 27935865  T
Q  478 attatttt 485  Q
    ||||||||    
T  27935866 attatttt 27935873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 42285907 - 42286009
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||  |||| | |||||||||    
T  42285907 tgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatg-cacacaacttccaaagt 42286005  T
Q  478 atta 481  Q
    ||||    
T  42286006 atta 42286009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 45933736 - 45933633
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| ||||||    ||||||||||||||| ||| ||||||||||| |||||||||||| ||| |||||    
T  45933736 tgttttaaaatgaatgtcactttcagttttcaatgcaataat----ttttcttttcaattgcacccttcaattaatactatgttacactatttctaaagt 45933641  T
Q  478 attatttt 485  Q
    ||||||||    
T  45933640 attatttt 45933633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 24133282 - 24133206
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||| |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  24133282 tgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaata 24133206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 34012160 - 34012236
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||| |||||||||||    
T  34012160 tgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttcaattgtacccttcaattaata 34012236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 8603974 - 8604080
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||| |||||||| | ||||||||| |||||||| ||||||||||||||  |||| ||||||||||| |||  ||||||| |||||||||    
T  8603974 tgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttttcaatgatacccttcaattaatactat-atacactacttccaaagt 8604072  T
Q  478 attatttt 485  Q
    ||||||||    
T  8604073 attatttt 8604080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 18292334 - 18292436
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||||||||| ||| ||||||||| | ||  |||||| |||||||||    
T  18292334 tgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaattgtatcatccaattaatactctg-cacactacttccaaagt 18292432  T
Q  478 atta 481  Q
    ||||    
T  18292433 atta 18292436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 23935421 - 23935527
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||  ||| ||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||||||||||| |||| |||     
T  23935421 tgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttcttttcaa-tgtacccttcaattaatactatgttacactacttccgaagg 23935519  T
Q  478 attatttt 485  Q
    ||||||||    
T  23935520 attatttt 23935527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 40339458 - 40339564
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||| ||||||||| | ||| ||||| |||||||| ||| | |||||||||||||| |||||||||||||||  ||||||| |||||||||    
T  40339458 tgtttcaaaatgactgtcactttcaattttcaatgcaataataactttat-ttttcaattgtacccttcaattaatattattatacactacttccaaagt 40339556  T
Q  478 attatttt 485  Q
    ||| ||||    
T  40339557 attctttt 40339564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 481
Target Start/End: Original strand, 18270579 - 18270679
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttc-ttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||| | ||||||||||| ||  |||||| |||||||||||    
T  18270579 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaatattctg-cacactacttccaaagtat 18270677  T
Q  480 ta 481  Q
    ||    
T  18270678 ta 18270679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 31196575 - 31196675
Alignment:
Q  385 aaatgaatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    |||||||||||||||| | |||| ||||| ||||||| |||||||||||||||||| || |||||||||||||||  ||||||| || ||||||||||||    
T  31196575 aaatgaatgtcactttgaatttctaatgttataataacttttttcttttcaattgtgcccttcaattaatattat-atacactaatttcaaagtattatt 31196673  T
Q  484 tt 485  Q
    ||    
T  31196674 tt 31196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 19105153 - 19105077
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||| |||||  |||| |||||||| |||||||||||||||||||| |||||||||||    
T  19105153 tgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaata 19105077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 34274793 - 34274869
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||  ||||||||| ||||||||| | |||||||||    
T  34274793 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctttttaattgtaccctccaattaata 34274869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 45499979 - 45499899
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||||||||||||| ||||||| |||||||||||  |||||||| |||||||||||| ||| || |||||||||||||||    
T  45499979 tgtttcaaaatgaatttcactttcagtttccaatgccataataatattttcttttcaaatgtgcctttcaattaatattat 45499899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 1031154 - 1031260
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||||||||| || |||||||| || ||||||||  |||| |||||||||||||  ||||||||||| |||  ||||||| ||||||| |    
T  1031154 tgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattgtactcttcaattaatactat-atacactacttccaaatt 1031252  T
Q  478 attatttt 485  Q
    ||||||||    
T  1031253 attatttt 1031260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 44567193 - 44567091
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| | ||| ||||| |||||||| |||||||||||||||||| ||| ||||||||| | ||  |||||| |||||||||    
T  44567193 tgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttcttttcaattgtatcatccaattaatactttg-cacactacttccaaagt 44567095  T
Q  478 atta 481  Q
    ||||    
T  44567094 atta 44567091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 48843551 - 48843657
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||| |||| || | |||||| |||  ||||||| |||||| ||    
T  48843551 tgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaattatacccttaatttaatactat-atacactacttccaacgt 48843649  T
Q  478 attatttt 485  Q
    ||||||||    
T  48843650 attatttt 48843657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 6563560 - 6563486
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    |||||||| |||||||| |||||  ||| ||||||||| |||||||||||||||||||| |||||||||||||||    
T  6563560 aaaatgaacgtcactttcagtttttaatttaataataactttttcttttcaattgtacccttcaattaatattat 6563486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 481
Target Start/End: Original strand, 25440884 - 25440973
Alignment:
Q  391 atgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagtatta 25440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 28289219 - 28289319
Alignment:
Q  383 caaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    |||||| ||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||| ||||||||||| |||  ||||||| || |||||||||||    
T  28289219 caaaataaatgtcactttgagttttcaatgcaataataacattttcttttcaattgtacc-ttcaattaatactat-atacactactttcaaagtattat 28289316  T
Q  483 ttt 485  Q
    |||    
T  28289317 ttt 28289319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 37502321 - 37502394
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||| |||| | |||||||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttcttttcaattttaccctccaattaata 37502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 24780458 - 24780399
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaatt 437  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||    
T  24780458 tgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttattttcaatt 24780399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 42753707 - 42753812
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||||||  ||||||||   |||||||||||| ||||| |||||||||||||||  ||||||| ||  |||||    
T  42753707 tgtttcaaaatgaatgtcactttcaatttccaatacaataataacactttcttttcaatcgtacc-ttcaattaatattat-atacactatttttaaagt 42753804  T
Q  478 attatttt 485  Q
    ||||||||    
T  42753805 attatttt 42753812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 4268610 - 4268687
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataata-attttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||| |||| | |||||||||||||||||  |||||| |||||||||||||| | |||||||||    
T  4268610 tgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttttgttttcaattgtaccttccaattaata 4268687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 481
Target Start/End: Complemental strand, 31930006 - 31929910
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||| | | ||| ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||||||    
T  31930006 aaaatgaatattattttcagttttcaatgcaataataattttttcttttcaattgtaccctccaattaatactttg-cacactacttccaaagtatta 31929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 6747226 - 6747327
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||| |||||||||||| ||||||||||| ||||||||  ||||||||| ||||||||| | ||||||||| | ||  |||||| |||||||||    
T  6747226 tgtttaaaaacgaatgtcactttcagtttccaatgcaataataa-cttttctttttaattgtaccctccaattaatactctg-cacactacttccaaagt 6747323  T
Q  478 atta 481  Q
    ||||    
T  6747324 atta 6747327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 485
Target Start/End: Complemental strand, 16564883 - 16564812
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||| ||||| ||||||||| || ||||||||||||||||||||||| || ||||||| || ||||||    
T  16564883 aataataactttttattttcaattatagcattcaattaatattatgttacattacttccaaaataatatttt 16564812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 16600779 - 16600850
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    |||||||| ||||| ||||||||| || ||||||||||||||||||||||| || ||||||| || ||||||    
T  16600779 aataataactttttattttcaattatagcattcaattaatattatgttacattacttccaaaataatatttt 16600850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 477
Target Start/End: Original strand, 36807970 - 36808033
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||| |||||||||||||||||||  |||||||||||| ||||||||||| || ||||||    
T  36807970 aataataactttttcttttcaattgtactcttcaattaatatcatgttacactactttcaaagt 36808033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 39557327 - 39557380
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaatt 437  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  39557327 aaaataaatgtcactttcagttttcaatgtaataataattttttctcttcaatt 39557380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 2297037 - 2297148
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttct-----tttcaattgtaccattcaattaatattatgttacactagttcc 472  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||  |||||||     |||||| |||||||| ||||||||| | ||  |||||| ||||    
T  2297037 tgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttcttttaatttcaactgtaccatccaattaatactctg-cacactacttcc 2297135  T
Q  473 aaagtattatttt 485  Q
    ||| |||||||||    
T  2297136 aaaatattatttt 2297148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 33682483 - 33682604
Alignment:
Q  333 tactccatttattttaaaataagtgtcgttttatctatnnnnnnntgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttctttt 432  Q
    |||||||| ||||||||||| |||||||||||| | |        |||||||||| ||  |||||||| |  || ||||| ||||||||||||| |||||    
T  33682483 tactccatctattttaaaatgagtgtcgttttagccaaaaatatttgtttcaaaaagaccgtcactttcaagtttcaatgcaataataatttttcctttt 33682582  T
Q  433 caattgtaccattcaattaata 454  Q
    ||||| |||| |||||||||||    
T  33682583 caattttacccttcaattaata 33682604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  379 gtttcaaaatgaatgtcacttttagtttccaatgtaataataatttttt 427  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 8293219 - 8293114
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||| ||||||||||| | || || | |||||||| ||||| |||||||||||| | || ||||||||||||  ||||||| ||||||| |    
T  8293219 tgttttaaaatgattgtcacttttaatatcaaa-gcaataataactttttattttcaattgtatcttttaattaatattat-atacactacttccaaatt 8293122  T
Q  478 attatttt 485  Q
    ||||||||    
T  8293121 attatttt 8293114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 485
Target Start/End: Complemental strand, 29636375 - 29636272
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataa-ttttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    ||||||| ||||||||||| |||||| |||| |||||||| || ||| |||||||||  | | ||||||||||| |||  ||||||| ||| ||||||||    
T  29636375 tcaaaataaatgtcactttcagtttctaatgcaataataacttcttttttttcaattacatccttcaattaatactat-atacactacttctaaagtatt 29636277  T
Q  481 atttt 485  Q
    |||||    
T  29636276 atttt 29636272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 21819283 - 21819388
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    |||||||||||||| || | ||| ||||| ||||  |||||||| || || |||||||||||| ||||||||||||| |||  |||| || ||||||| |    
T  21819283 tgtttcaaaatgaaagttattttcagttttcaatacaataataaattctt-ttttcaattgtatcattcaattaatactat-atacattacttccaaaat 21819380  T
Q  478 attatttt 485  Q
    ||||||||    
T  21819381 attatttt 21819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 431 - 485
Target Start/End: Complemental strand, 23155560 - 23155506
Alignment:
Q  431 ttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||   ||||||||||||||||||||| || ||| |||||||||||||    
T  23155560 ttcaattgtagttttcaattaatattatgttacattacttctaaagtattatttt 23155506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 440
Target Start/End: Complemental strand, 24425028 - 24424966
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgta 440  Q
    |||| |||||||||||| | ||||| |||| |||| |||| ||||| ||||||||||||||||    
T  24425028 tgttccaaaatgaatgttatttttaatttctaatgcaatattaattatttcttttcaattgta 24424966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 38016374 - 38016480
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  38016374 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaatactatgttacactacttccaaagt 38016472  T
Q  478 attatttt 485  Q
    ||||||||    
T  38016473 attatttt 38016480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 51398009 - 51398116
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |    
T  51398009 tgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaat 51398108  T
Q  478 attatttt 485  Q
    ||||||||    
T  51398109 attatttt 51398116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 30431121 - 30431226
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||    
T  30431121 tttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtaaccttcaattaatattatattacactacttccaaagtat 30431220  T
Q  480 tatttt 485  Q
    ||||||    
T  30431221 tatttt 30431226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 382 - 485
Target Start/End: Complemental strand, 36729957 - 36729854
Alignment:
Q  382 tcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatta 481  Q
    ||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacattacttccaaagtatta 36729858  T
Q  482 tttt 485  Q
    ||||    
T  36729857 tttt 36729854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 44676220 - 44676327
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||| | ||||||||| | ||||||||||||||||||||    
T  44676220 tgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaatactgtgttacactagttccaaagt 44676319  T
Q  478 attatttt 485  Q
    ||||||||    
T  44676320 attatttt 44676327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 47895495 - 47895388
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  47895495 tgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattatacccttcaattaatactatgttacactatttccaaagt 47895396  T
Q  478 attatttt 485  Q
    ||||||||    
T  47895395 attatttt 47895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 36460805 - 36460912
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||| ||||||| ||||| ||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||| |||| |||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgcacccttcaattaatattatgttatactacttccaaagt 36460904  T
Q  478 attatttt 485  Q
    ||||||||    
T  36460905 attatttt 36460912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 53200831 - 53200725
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  53200831 tgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgta-cattcaattaatattatgttacactactttcaaagt 53200733  T
Q  478 attatttt 485  Q
    | ||||||    
T  53200732 actatttt 53200725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 378 - 480
Target Start/End: Complemental strand, 3152957 - 3152855
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |    
T  3152957 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaat 3152858  T
Q  478 att 480  Q
    |||    
T  3152857 att 3152855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 378 - 467
Target Start/End: Original strand, 41850389 - 41850478
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacacta 467  Q
    ||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  41850389 tgttttaaaatgaatgacacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacacta 41850478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 11393544 - 11393651
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||  ||||||||||| |||||||||    
T  11393544 tgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatacaatgttacactacttccaaagt 11393643  T
Q  478 attatttt 485  Q
    ||||||||    
T  11393644 attatttt 11393651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 30426475 - 30426368
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| |||||||||||| ||||||| |    
T  30426475 tgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttttaattgtacccttcaattaatactatgttacactacttccaaaat 30426376  T
Q  478 attatttt 485  Q
    ||| ||||    
T  30426375 attttttt 30426368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 31853713 - 31853606
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| |||||||||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||| |||||||||||| || ||||||    
T  31853713 tgtttcaaaataaatgtcacttttagtttccagtacaataataattttttcttttttattgtacccttcaattaatactatgttacactactttcaaagt 31853614  T
Q  478 attatttt 485  Q
    ||||||||    
T  31853613 attatttt 31853606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 32492332 - 32492225
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||||| |||||||||||||||| | |||||||||| ||||||| |    
T  32492332 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattataccattcaattaatactttgttacactacttccaaaat 32492233  T
Q  478 attatttt 485  Q
    ||||||||    
T  32492232 attatttt 32492225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 33194182 - 33194075
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| ||||||||||| ||| |||| ||||| |||| ||||||||| ||||||||||||||||||||| || |||||||||    
T  33194182 tgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttttaattgtacccttcaattaatattatgttacattacttccaaagt 33194083  T
Q  478 attatttt 485  Q
    ||||||||    
T  33194082 attatttt 33194075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 394 - 485
Target Start/End: Complemental strand, 35557893 - 35557802
Alignment:
Q  394 tcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||| |||||||||||||||||    
T  35557893 tcactttcagtttccaatgcaataataattttttcttttcaattgtacctttcaattattactatgttacactacttccaaagtattatttt 35557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 45213873 - 45213766
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||| ||||||||||| ||| |||||||| || ||||||    
T  45213873 tgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatactatattacactactttcaaagt 45213774  T
Q  478 attatttt 485  Q
    ||||||||    
T  45213773 attatttt 45213766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 50088467 - 50088364
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  50088467 tgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagt 50088368  T
Q  478 atta 481  Q
    ||||    
T  50088367 atta 50088364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 36844893 - 36844790
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||  ||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||  ||||||| |||||||||    
T  36844893 tgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtatcattcaattaatattat-atacactacttccaaagt 36844795  T
Q  478 attat 482  Q
    |||||    
T  36844794 attat 36844790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 2458006 - 2458113
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||| |||| |||| ||||||||||| ||| |||||||| |||||||||    
T  2458006 tgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctttttaattatacccttcaattaatactatattacactacttccaaagt 2458105  T
Q  478 attatttt 485  Q
    ||| ||||    
T  2458106 attgtttt 2458113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 40487829 - 40487933
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||| ||| |||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttcttttcaattgtacctttcaattaatactat-atacactacttctaaagtat 40487927  T
Q  480 tatttt 485  Q
    ||||||    
T  40487928 tatttt 40487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 484
Target Start/End: Complemental strand, 33024445 - 33024345
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||| ||||| ||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||  || ||| ||||||||    
T  33024445 aaaatgaatgttactttcagtttccaatgcaataataactttatcttttcaattgcaccattcaattaatattatgttacactgctttcaacgtattatt 33024346  T
Q  484 t 484  Q
    |    
T  33024345 t 33024345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 47137962 - 47138069
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||||||||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||| || ||||||| |    
T  47137962 tgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattgtacccttcaaataatactatgttacagtacttccaaaat 47138061  T
Q  478 attatttt 485  Q
    ||||||||    
T  47138062 attatttt 47138069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 50646261 - 50646155
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||  |||| || ||| |||||    
T  50646261 tgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccatttaattaatactat-atacattacttcaaaagt 50646163  T
Q  478 attatttt 485  Q
    ||||||||    
T  50646162 attatttt 50646155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 38363785 - 38363897
Alignment:
Q  379 gtttcaaaatgaatgtcacttttagtttccaatgtaataataa------ttttttcttttcaattgtaccattcaattaatattatgttacactagttcc 472  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||      |||||| |||||||||||||| ||||||||||| || ||||||||| ||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttttttttttttttcaattgtacccttcaattaatactacgttacactacttcc 38363884  T
Q  473 aaagtattatttt 485  Q
    |||||||||||||    
T  38363885 aaagtattatttt 38363897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 4392195 - 4392271
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  4392195 tgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttcttttcaattgtacccttcaattaata 4392271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 7231047 - 7230971
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||||||||||||| | |||| |||||||| |||||||||||||||||| |||||||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttcttttcaattgtatcattcaattaata 7230971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 41287650 - 41287540
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataat---tttttcttttcaattgtaccattcaattaatattatgttacactagttccaa 474  Q
    |||||||||||||||||||||||  ||||||| || |||| ||||   ||||||||||||||| |||| ||||||||||||||||||||| || ||||||    
T  41287650 tgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttcttttcaattatacccttcaattaatattatgttacattacttccaa 41287551  T
Q  475 agtattatttt 485  Q
    |||||| ||||    
T  41287550 agtattttttt 41287540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 23525467 - 23525360
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||| ||||||  ||||||||| |||||||| ||||||||||||| | |||| ||||||||||| ||||||||| || |||||||||    
T  23525467 tgttttaaaataaatgttacttttgatttccaatgcaataataagtttttcttttcaactatacccttcaattaatactatgttacattacttccaaagt 23525368  T
Q  478 attatttt 485  Q
    ||||||||    
T  23525367 attatttt 23525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 42571680 - 42571578
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||    
T  42571680 tgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagt 42571582  T
Q  478 atta 481  Q
    ||||    
T  42571581 atta 42571578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 48901719 - 48901825
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| |||  ||||||| || || |||    
T  48901719 tgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactat-atacactaatttcatagt 48901817  T
Q  478 attatttt 485  Q
    ||||||||    
T  48901818 attatttt 48901825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 48903285 - 48903391
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| |||  ||||||| || || |||    
T  48903285 tgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactat-atacactaatttcatagt 48903383  T
Q  478 attatttt 485  Q
    ||||||||    
T  48903384 attatttt 48903391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 472
Target Start/End: Original strand, 39356884 - 39356978
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttcc 472  Q
    ||||| ||||| ||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39356884 tgttttaaaataaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtacctttcaattaatactatgttacactacttcc 39356978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 458
Target Start/End: Original strand, 42071984 - 42072064
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattat 458  Q
    ||||| |||||| |||||| ||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||    
T  42071984 tgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaactgtacccttcaattaatattat 42072064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 19115386 - 19115487
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| | ||||||||| | ||  |||||| |||||||||    
T  19115386 tgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattatacc-tccaattaatactctg-cacactacttccaaagt 19115483  T
Q  478 atta 481  Q
    ||||    
T  19115484 atta 19115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 19373585 - 19373691
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||| ||||||||| | ||| ||||| |||||||| ||||| |||||||||||||| |||||||||||| ||  ||||||| |||||||||    
T  19373585 tgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattgtacccttcaattaatatcat-atacactacttccaaagt 19373683  T
Q  478 attatttt 485  Q
     |||||||    
T  19373684 tttatttt 19373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 22857089 - 22857195
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||||||||   ||| |||||||||||||| |||||||||||||||||||  |||||||||||||||  ||||||| ||| ||| |    
T  22857089 tgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattgtactgttcaattaatattat-atacactacttctaaaat 22857187  T
Q  478 attatttt 485  Q
    ||||||||    
T  22857188 attatttt 22857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 30934957 - 30934854
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| |||||||||||||   | ||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||  ||||||| ||| |||||    
T  30934957 tgttttaaaatgaatgtca---tcagtttccaatgcaataataattttttcttttcaattgtacccctcaattaatactat-atacactacttctaaagt 30934862  T
Q  478 attatttt 485  Q
    ||||||||    
T  30934861 attatttt 30934854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 4758990 - 4759066
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  4758990 tgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacctttcaattaata 4759066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 42886750 - 42886850
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||| ||||| | ||||||||| |||||||| ||||||||||||||  |||| | ||||||||||||||  |||||| |||||||||    
T  42886750 tgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttttcaat--taccctccaattaatattatg-cacactacttccaaagt 42886846  T
Q  478 atta 481  Q
    ||||    
T  42886847 atta 42886850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 50038322 - 50038246
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| | |||||||||    
T  50038322 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaata 50038246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 31583585 - 31583483
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||| ||||||||||| |||||||| || ||||||||| ||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||    
T  31583585 tgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattgtaccttccaattaatactctg-cacactacttccaaagt 31583487  T
Q  478 atta 481  Q
    ||||    
T  31583486 atta 31583483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 9189580 - 9189480
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||| ||||| ||||| |||||||| ||||||||||||| | || ||||||||||||| |||  |||| || ||||||| |||||||    
T  9189580 aaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaatactat-atacattacttccaaaatattatt 9189482  T
Q  484 tt 485  Q
    ||    
T  9189481 tt 9189480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 408 - 485
Target Start/End: Original strand, 51481964 - 51482041
Alignment:
Q  408 caatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||| ||||||||||||||| |||||||| |||| || |||||||||||||||||| || |||||||| ||||||||    
T  51481964 caatgcaataataattttttcatttcaattataccttttaattaatattatgttacattacttccaaagcattatttt 51482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 11019977 - 11019901
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||| ||||||||||| | ||| ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  11019977 tgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttcaatcgtacctttcaattaata 11019901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 30315308 - 30315384
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||||||||||||||||||  |||||||||| || ||||| |||||||||| |||| |||| |||||||||||    
T  30315308 tgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaattatacccttcaattaata 30315384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 38140949 - 38141055
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||||  ||||| || ||||||||||| |||  ||||||| ||||||| |    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttttcattgtgcccttcaattaatactat-atacactacttccaaaat 38141047  T
Q  478 attatttt 485  Q
    || |||||    
T  38141048 ataatttt 38141055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 25363857 - 25363785
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatatta 457  Q
    ||||||||||||| |||||||||| |||  |||||||||||||| |||| ||||||| |||| |||||||||||    
T  25363857 aaaatgaatgtcatttttagtttctaatacaataataattttttatttt-aattgtatcatttaattaatatta 25363785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 454
Target Start/End: Original strand, 27067634 - 27067683
Alignment:
Q  405 ttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  27067634 ttccaatgcaataataactttttcttttcaattgtacccttcaattaata 27067683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 47823602 - 47823526
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||| ||||| ||||||| |||||||||  |||| ||||||||||||||||||| |||||||   |||||||||||    
T  47823602 tgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctttttaattgtattcttcaattaata 47823526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 45566834 - 45566884
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatgttaca 464  Q
    |||||||| |||||||||||||||||| ||||||||||||| ||| |||||    
T  45566834 aataataactttttcttttcaattgtatcattcaattaatactatattaca 45566884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 432 - 485
Target Start/End: Complemental strand, 13756970 - 13756917
Alignment:
Q  432 tcaattgtaccattcaattaatattatgttacactagttccaaagtattatttt 485  Q
    ||||||||||| ||||||||||||||||||||| || ||  |||||||||||||    
T  13756970 tcaattgtacccttcaattaatattatgttacattacttttaaagtattatttt 13756917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 23208440 - 23208387
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttc 433  Q
    ||||||||||||||||||||||| |||||||||   |||||||| |||||||||||    
T  23208440 tgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttcttttc 23208387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 24357018 - 24356959
Alignment:
Q  398 ttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatg 459  Q
    ||||||||||||||  |||||||| ||||   ||||||||||||| ||||||||||||||||    
T  24357018 ttttagtttccaattaaataataacttttc--tttcaattgtacccttcaattaatattatg 24356959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 410
Target Start/End: Original strand, 39168434 - 39168464
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaa 410  Q
    |||||||||||||||||||||||||||||||    
T  39168434 tttcaaaatgaatgtcacttttagtttccaa 39168464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 437
Target Start/End: Complemental strand, 40717793 - 40717763
Alignment:
Q  407 ccaatgtaataataattttttcttttcaatt 437  Q
    |||||||||||||||||||||||||||||||    
T  40717793 ccaatgtaataataattttttcttttcaatt 40717763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 50033036 - 50033114
Alignment:
Q  378 tgtttcaaaa-tgaatgtcacttttagtttccaatgtaataataatttttt-cttttcaattgtaccattcaattaata 454  Q
    |||||||||| ||||| ||| |||||||||| ||| |||||||||||||||  |||| ||||||| |||| ||||||||    
T  50033036 tgtttcaaaagtgaatctcatttttagtttctaatctaataataattttttgttttttaattgtatcatttaattaata 50033114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 455
Target Start/End: Original strand, 8817139 - 8817215
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatat 455  Q
    ||||| ||||||||||| | ||| ||||  ||||| |||||||||||||||  |||||||||||| || |||||||||    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttc-cttcaattgtaccttttaattaatat 8817215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 45460698 - 45460743
Alignment:
Q  414 aataataattttttcttttcaattgtaccattcaattaatattatg 459  Q
    |||||||| | |||||||||||||||||| | ||||||||||||||    
T  45460698 aataataactctttcttttcaattgtaccctccaattaatattatg 45460743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 50346625 - 50346700
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||| | ||||||| ||| ||||| ||||| |||||||  |||| ||||||||||||||| |||||| ||||    
T  50346625 tgtttcaaactaaatgtcattttgagttttcaatgcaataatacatttt-cttttcaattgtacccttcaatcaata 50346700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 54403409 - 54403341
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaa 452  Q
    ||||||||||||| |||||||||| |||| |||  |||  ||||||||||| ||||||| | |||||||    
T  54403409 aaaatgaatgtcatttttagtttcaaatgcaatgttaacattttcttttcatttgtaccctccaattaa 54403341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 24894 - 24790
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||| || |||||||||    
T  24894 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaagt 24795  T
Q  478 attat 482  Q
    |||||    
T  24794 attat 24790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 62632 - 62735
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||| ||    
T  62632 tgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctttttaattgtacccttcaattaatattatgttacactacttccaaggt 62731  T
Q  478 atta 481  Q
    ||||    
T  62732 atta 62735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 3656 - 3551
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||| |||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttctaaagtat 3557  T
Q  480 tatttt 485  Q
    ||||||    
T  3556 tatttt 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 1567 - 1460
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||| |||||||||||||||||||| |||| ||||||||||||||||||| ||||||| |    
T  1567 tgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttcttttcaattgtacccttcatttaatattatgttacactacttccaaaat 1468  T
Q  478 attatttt 485  Q
    ||||||||    
T  1467 attatttt 1460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 9795 - 9689
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||| ||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |    
T  9795 tgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaa-t 9697  T
Q  478 attatttt 485  Q
    ||||||||    
T  9696 attatttt 9689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 451
Target Start/End: Complemental strand, 10109 - 10035
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataatttttt-cttttcaattgtaccattcaatta 451  Q
    ||||| ||||||||||||||||| | ||| ||||   ||||||||||||| ||||||||||||||| ||||||||    
T  10109 tgttttaaaatgaatgtcactttcaattttcaatactataataatttttttcttttcaattgtacccttcaatta 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 21229 - 21128
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||  ||||||    
T  21229 aaaatgactgtcactttcagtttcaaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaatgattatt 21130  T
Q  484 tt 485  Q
    ||    
T  21129 tt 21128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 18405 - 18302
Alignment:
Q  381 ttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtatt 480  Q
    |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||  ||||||| || |||||||||    
T  18405 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaacattat-atacactattttcaaagtatt 18307  T
Q  481 atttt 485  Q
    |||||    
T  18306 atttt 18302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 840 - 743
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaag 476  Q
    ||||||| ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| || ||||||||||||  ||||||| ||||||||    
T  840 tgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttcaattgtaccctttaattaatattat-atacactaattccaaag 743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 4566 - 4667
Alignment:
Q  380 tttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtat 479  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||||||| |||||| ||||||||  ||||||| ||||||| |||    
T  4566 tttcaaaatgaatgtcacttttaatttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattat-atacactacttccaaaatat 4664  T
Q  480 tat 482  Q
    |||    
T  4665 tat 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 719 - 619
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattatt 483  Q
    ||||||||||||||||  | ||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||  ||||||| |||||||||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctttttaattgtacccttcaattaatattat-atacactacttccaaagtattatt 621  T
Q  484 tt 485  Q
    ||    
T  620 tt 619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 3964 - 3862
Alignment:
Q  378 tgtttcaaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagt 477  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| | ||||||||| | ||  |||||| |||||||||    
T  3964 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagt 3866  T
Q  478 atta 481  Q
    ||||    
T  3865 atta 3862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 661 - 591
Alignment:
Q  384 aaaatgaatgtcacttttagtttccaatgtaataataattttttcttttcaattgtaccattcaattaata 454  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctttacaattgtacccttcaattaata 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 4145 - 4246
Alignment:
Q  384 aaaatgaatgtcactttt-agtttccaatgtaataataattttttcttttcaattgtaccattcaattaatattatgttacactagttccaaagtattat 482  Q
    ||||||||||||| |||| | ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||| |||||||| |    
T  4145 aaaatgaatgtcatttttcaattttcaatgcaataataattttttcttttcaattgtacccttcaattaatattat-atacactacttctaaagtattgt 4243  T
Q  483 ttt 485  Q
    |||    
T  4244 ttt 4246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 442
Target Start/End: Original strand, 9474 - 9508
Alignment:
Q  408 caatgtaataataattttttcttttcaattgtacc 442  Q
    ||||| |||||||||||||||||||||||||||||    
T  9474 caatgcaataataattttttcttttcaattgtacc 9508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University