View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19998_high_10 (Length: 224)
Name: NF19998_high_10
Description: NF19998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19998_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 2551746 - 2551943
Alignment:
| Q |
13 |
cagagaacaaagtcgggtttactcgatcattcaaatatcatccaaggaagcaagaggttcttaacaaattcatcaagtttgtatcaagaatctgaaggga |
112 |
Q |
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| T |
2551746 |
cagagaacaaagtcgggtttactcgatcattcaaatatcatccaaggaagcaagaggttcttaacaaattcatcaagtttgtatcaagaatctgaaggga |
2551845 |
T |
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| Q |
113 |
gcattgaaataagtgatcctataatccatgaaattcttcatgatagctcaataggtcaaatttgttcgagtggacgtaaggatttcgaaggttctttt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2551846 |
gcattgaaataagtgatcctataatccatgaaattcttcatgatagctcaataggtcaaatttgttcgagtggacgtaaggatttcgaaggttctttt |
2551943 |
T |
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